MC02g1350 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC02g1350
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC02: 16082415 .. 16082498 (+)
RNA-Seq ExpressionMC02g1350
SyntenyMC02g1350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGAAAATCATGATCGGGATAGCGGACCCAAAGCTATGGAACTTGGGTGTGGGTCTTTTGTCGAAATGGAATGTCTTTATCTTT

mRNA sequence

AGGAAAATCATGATCGGGATAGCGGACCCAAAGCTATGGAACTTGGGTGTGGGTCTTTTGTCGAAATGGAATGTCTTTATCTTT

Coding sequence (CDS)

AGGAAAATCATGATCGGGATAGCGGACCCAAAGCTATGGAACTTGGGTGTGGGTCTTTTGTCGAAATGGAATGTCTTTATCTTT

Protein sequence

RKIMIGIADPKLWNLGVGLLSKWNVFIF
Homology
BLAST of MC02g1350 vs. NCBI nr
Match: KAF9599177.1 (hypothetical protein IFM89_035636 [Coptis chinensis])

HSP 1 Score: 53.1 bits (126), Expect = 6.29e-08
Identity = 22/25 (88.00%), Postives = 22/25 (88.00%), Query Frame = 0

Query: 4  MIGIADPKLWNLGVGLLSKWNVFIF 28
          MIGIAD KLWNLGVGLLSKWN F F
Sbjct: 1  MIGIADQKLWNLGVGLLSKWNAFAF 25

BLAST of MC02g1350 vs. NCBI nr
Match: VVW88655.1 (unnamed protein product, partial [Nymphaea colorata] >VVW90855.1 unnamed protein product, partial [Nymphaea colorata] >VVW93334.1 unnamed protein product, partial [Nymphaea colorata])

HSP 1 Score: 52.4 bits (124), Expect = 1.03e-07
Identity = 22/24 (91.67%), Postives = 22/24 (91.67%), Query Frame = 0

Query: 1  RKIMIGIADPKLWNLGVGLLSKWN 24
          RKIMIGIAD KLWN GVGLLSKWN
Sbjct: 38 RKIMIGIADAKLWNSGVGLLSKWN 61

BLAST of MC02g1350 vs. NCBI nr
Match: VVW84856.1 (unnamed protein product, partial [Nymphaea colorata])

HSP 1 Score: 52.4 bits (124), Expect = 1.49e-07
Identity = 22/24 (91.67%), Postives = 22/24 (91.67%), Query Frame = 0

Query: 1  RKIMIGIADPKLWNLGVGLLSKWN 24
          RKIMIGIAD KLWN GVGLLSKWN
Sbjct: 54 RKIMIGIADAKLWNSGVGLLSKWN 77

BLAST of MC02g1350 vs. NCBI nr
Match: VVW89832.1 (unnamed protein product, partial [Nymphaea colorata])

HSP 1 Score: 52.4 bits (124), Expect = 1.67e-07
Identity = 22/24 (91.67%), Postives = 22/24 (91.67%), Query Frame = 0

Query: 1  RKIMIGIADPKLWNLGVGLLSKWN 24
          RKIMIGIAD KLWN GVGLLSKWN
Sbjct: 55 RKIMIGIADAKLWNSGVGLLSKWN 78

BLAST of MC02g1350 vs. NCBI nr
Match: KCW53478.1 (hypothetical protein EUGRSUZ_J02731 [Eucalyptus grandis])

HSP 1 Score: 51.6 bits (122), Expect = 3.00e-07
Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 0

Query: 1  RKIMIGIADPKLWNLGVGLLSKWN 24
          RKIMIGIADP+LWNLGVGLLSK N
Sbjct: 34 RKIMIGIADPRLWNLGVGLLSKLN 57

BLAST of MC02g1350 vs. ExPASy TrEMBL
Match: A0A5K1HT79 (Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS30148 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.98e-08
Identity = 22/24 (91.67%), Postives = 22/24 (91.67%), Query Frame = 0

Query: 1  RKIMIGIADPKLWNLGVGLLSKWN 24
          RKIMIGIAD KLWN GVGLLSKWN
Sbjct: 38 RKIMIGIADAKLWNSGVGLLSKWN 61

BLAST of MC02g1350 vs. ExPASy TrEMBL
Match: A0A5K1HAV1 (Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS29079 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 7.21e-08
Identity = 22/24 (91.67%), Postives = 22/24 (91.67%), Query Frame = 0

Query: 1  RKIMIGIADPKLWNLGVGLLSKWN 24
          RKIMIGIAD KLWN GVGLLSKWN
Sbjct: 54 RKIMIGIADAKLWNSGVGLLSKWN 77

BLAST of MC02g1350 vs. ExPASy TrEMBL
Match: A0A5K1HQI3 (Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS30503 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 8.08e-08
Identity = 22/24 (91.67%), Postives = 22/24 (91.67%), Query Frame = 0

Query: 1  RKIMIGIADPKLWNLGVGLLSKWN 24
          RKIMIGIAD KLWN GVGLLSKWN
Sbjct: 55 RKIMIGIADAKLWNSGVGLLSKWN 78

BLAST of MC02g1350 vs. ExPASy TrEMBL
Match: A0A059AI35 (ATP-synt_DE_N domain-containing protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_J02731 PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.45e-07
Identity = 22/24 (91.67%), Postives = 23/24 (95.83%), Query Frame = 0

Query: 1  RKIMIGIADPKLWNLGVGLLSKWN 24
          RKIMIGIADP+LWNLGVGLLSK N
Sbjct: 34 RKIMIGIADPRLWNLGVGLLSKLN 57

BLAST of MC02g1350 vs. ExPASy TrEMBL
Match: Q37084 (Uncharacterized protein OS=Nicotiana tabacum OX=4097 PE=4 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.97e-07
Identity = 21/25 (84.00%), Postives = 22/25 (88.00%), Query Frame = 0

Query: 4  MIGIADPKLWNLGVGLLSKWNVFIF 28
          MIGIA+ KLWNLGVGLLSKWN F F
Sbjct: 1  MIGIANQKLWNLGVGLLSKWNGFSF 25

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAF9599177.16.29e-0888.00hypothetical protein IFM89_035636 [Coptis chinensis][more]
VVW88655.11.03e-0791.67unnamed protein product, partial [Nymphaea colorata] >VVW90855.1 unnamed protein... [more]
VVW84856.11.49e-0791.67unnamed protein product, partial [Nymphaea colorata][more]
VVW89832.11.67e-0791.67unnamed protein product, partial [Nymphaea colorata][more]
KCW53478.13.00e-0791.67hypothetical protein EUGRSUZ_J02731 [Eucalyptus grandis][more]
Match NameE-valueIdentityDescription
A0A5K1HT794.98e-0891.67Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS30... [more]
A0A5K1HAV17.21e-0891.67Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS29... [more]
A0A5K1HQI38.08e-0891.67Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS30... [more]
A0A059AI351.45e-0791.67ATP-synt_DE_N domain-containing protein OS=Eucalyptus grandis OX=71139 GN=EUGRSU... [more]
Q370842.97e-0784.00Uncharacterized protein OS=Nicotiana tabacum OX=4097 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC02g1350.1MC02g1350.1mRNA