MC02g1326 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC02g1326
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC02: 14889513 .. 14889848 (-)
RNA-Seq ExpressionMC02g1326
SyntenyMC02g1326
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGAGTTGGTAGAAAAAGCGAATGAAGAAGATAAAGAATTAAGTGAGCAAGATGCGATGGAAATAGTGCTTGGAAAGCAATCATCGTATACGAAAGGGATGGGTTACGGTCCAAAGCCACCAAGTCAGAAACAGGCAGGAGGATACTCTCAGGAATATGTTCATGCCTTGGAGGATAAACTGGCAAAAAATGAAGAGTTATTGCAAACTCAACGCCAGGAAACCCAGAGGTTGTTTGAAATGCAACGTCAAGAGTATGAAAGAAAGTTTGACAGTATAGAAGAACTTTTTCGAAGATTTACTGAAGGAGGAGGAAGTTCATCGTTGAACAAG

mRNA sequence

ATGGTGGAGTTGGTAGAAAAAGCGAATGAAGAAGATAAAGAATTAAGTGAGCAAGATGCGATGGAAATAGTGCTTGGAAAGCAATCATCGTATACGAAAGGGATGGGTTACGGTCCAAAGCCACCAAGTCAGAAACAGGCAGGAGGATACTCTCAGGAATATGTTCATGCCTTGGAGGATAAACTGGCAAAAAATGAAGAGTTATTGCAAACTCAACGCCAGGAAACCCAGAGGTTGTTTGAAATGCAACGTCAAGAGTATGAAAGAAAGTTTGACAGTATAGAAGAACTTTTTCGAAGATTTACTGAAGGAGGAGGAAGTTCATCGTTGAACAAG

Coding sequence (CDS)

ATGGTGGAGTTGGTAGAAAAAGCGAATGAAGAAGATAAAGAATTAAGTGAGCAAGATGCGATGGAAATAGTGCTTGGAAAGCAATCATCGTATACGAAAGGGATGGGTTACGGTCCAAAGCCACCAAGTCAGAAACAGGCAGGAGGATACTCTCAGGAATATGTTCATGCCTTGGAGGATAAACTGGCAAAAAATGAAGAGTTATTGCAAACTCAACGCCAGGAAACCCAGAGGTTGTTTGAAATGCAACGTCAAGAGTATGAAAGAAAGTTTGACAGTATAGAAGAACTTTTTCGAAGATTTACTGAAGGAGGAGGAAGTTCATCGTTGAACAAG

Protein sequence

MVELVEKANEEDKELSEQDAMEIVLGKQSSYTKGMGYGPKPPSQKQAGGYSQEYVHALEDKLAKNEELLQTQRQETQRLFEMQRQEYERKFDSIEELFRRFTEGGGSSSLNK
Homology
BLAST of MC02g1326 vs. NCBI nr
Match: XP_022143616.1 (uncharacterized protein LOC111013476 [Momordica charantia])

HSP 1 Score: 74.7 bits (182), Expect = 1.27e-13
Identity = 46/101 (45.54%), Postives = 67/101 (66.34%), Query Frame = 0

Query: 14  ELSEQDAMEIVLGKQSSYTKGMGYGPKPPSQKQAGG-YSQEYVHALEDKLAKNEE-LLQT 73
           E +E++ ME VLGK+S+Y  GMGYGPKP   K +   YS EYV +LE +L K+EE + +T
Sbjct: 120 EKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEEMART 179

Query: 74  QRQETQRLFEMQRQEYERKFDSIEELFRRFTEGGGSSSLNK 112
            +++ Q+  E Q QE+ RK   ++++F     GGGSSS +K
Sbjct: 180 TQEQIQKALEAQSQEFNRKLLEMQQMF---LSGGGSSSTSK 217

BLAST of MC02g1326 vs. NCBI nr
Match: XP_022148911.1 (uncharacterized protein LOC111017461 [Momordica charantia])

HSP 1 Score: 74.7 bits (182), Expect = 2.25e-13
Identity = 46/101 (45.54%), Postives = 67/101 (66.34%), Query Frame = 0

Query: 14  ELSEQDAMEIVLGKQSSYTKGMGYGPKPPSQKQAGG-YSQEYVHALEDKLAKNEE-LLQT 73
           E +E++ ME VLGK+S+Y  GMGYGPKP   K +   YS EYV +LE +L K+EE + +T
Sbjct: 125 EKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEEMART 184

Query: 74  QRQETQRLFEMQRQEYERKFDSIEELFRRFTEGGGSSSLNK 112
            +++ Q+  E Q QE+ RK   ++++F     GGGSSS +K
Sbjct: 185 TQEQIQKALEAQSQEFNRKLLEMQQMF---LSGGGSSSTSK 222

BLAST of MC02g1326 vs. NCBI nr
Match: RVX02610.1 (hypothetical protein CK203_016442 [Vitis vinifera])

HSP 1 Score: 48.5 bits (114), Expect = 2.12e-04
Identity = 37/104 (35.58%), Postives = 60/104 (57.69%), Query Frame = 0

Query: 15  LSEQDAMEIVLGKQSSYTKGMGYGPKPPSQKQAGGYSQEYVHALEDKLAKNEELLQTQRQ 74
           ++E +  E VLG++S Y KG+G+GPKP S  ++   S E+   LE +L + + L++TQ+Q
Sbjct: 16  MTEAEICERVLGQKSGYVKGLGFGPKPISFSKSRPSSSEHEIELEHRLVETQLLVETQQQ 75

Query: 75  --ETQR--------LFEMQRQEYERKFDSIEELFRRFTEGGGSS 108
             ETQ+        L + Q Q++ ++F   EE+ R      GSS
Sbjct: 76  QLETQQDRIDQLEALVQKQNQQHHQQF---EEILRHLRSSQGSS 116

BLAST of MC02g1326 vs. NCBI nr
Match: RVW22435.1 (hypothetical protein CK203_099249 [Vitis vinifera] >RVW55019.1 hypothetical protein CK203_117383 [Vitis vinifera] >RVX21492.1 hypothetical protein CK203_002255 [Vitis vinifera])

HSP 1 Score: 47.0 bits (110), Expect = 8.25e-04
Identity = 37/104 (35.58%), Postives = 59/104 (56.73%), Query Frame = 0

Query: 15  LSEQDAMEIVLGKQSSYTKGMGYGPKPPSQKQAGGYSQEYVHALEDKLAKNEELLQTQRQ 74
           ++E +  E VLG++S Y KG+G+GPKP S  ++   S E    LE +L + + L++TQ+Q
Sbjct: 16  MTEAEICERVLGQKSGYVKGLGFGPKPISFSKSRPSSSEREIELEHRLVETQLLVETQQQ 75

Query: 75  --ETQR--------LFEMQRQEYERKFDSIEELFRRFTEGGGSS 108
             ETQ+        L + Q Q++ ++F   EE+ R      GSS
Sbjct: 76  QLETQQDRIDQLEALVQKQNQQHHQQF---EEILRHLRSSQGSS 116

BLAST of MC02g1326 vs. ExPASy TrEMBL
Match: A0A6J1CQT5 (uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013476 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 6.13e-14
Identity = 46/101 (45.54%), Postives = 67/101 (66.34%), Query Frame = 0

Query: 14  ELSEQDAMEIVLGKQSSYTKGMGYGPKPPSQKQAGG-YSQEYVHALEDKLAKNEE-LLQT 73
           E +E++ ME VLGK+S+Y  GMGYGPKP   K +   YS EYV +LE +L K+EE + +T
Sbjct: 120 EKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEEMART 179

Query: 74  QRQETQRLFEMQRQEYERKFDSIEELFRRFTEGGGSSSLNK 112
            +++ Q+  E Q QE+ RK   ++++F     GGGSSS +K
Sbjct: 180 TQEQIQKALEAQSQEFNRKLLEMQQMF---LSGGGSSSTSK 217

BLAST of MC02g1326 vs. ExPASy TrEMBL
Match: A0A6J1D6S9 (uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017461 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.09e-13
Identity = 46/101 (45.54%), Postives = 67/101 (66.34%), Query Frame = 0

Query: 14  ELSEQDAMEIVLGKQSSYTKGMGYGPKPPSQKQAGG-YSQEYVHALEDKLAKNEE-LLQT 73
           E +E++ ME VLGK+S+Y  GMGYGPKP   K +   YS EYV +LE +L K+EE + +T
Sbjct: 125 EKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEEMART 184

Query: 74  QRQETQRLFEMQRQEYERKFDSIEELFRRFTEGGGSSSLNK 112
            +++ Q+  E Q QE+ RK   ++++F     GGGSSS +K
Sbjct: 185 TQEQIQKALEAQSQEFNRKLLEMQQMF---LSGGGSSSTSK 222

BLAST of MC02g1326 vs. ExPASy TrEMBL
Match: A0A438J0Y3 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_016442 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.03e-04
Identity = 37/104 (35.58%), Postives = 60/104 (57.69%), Query Frame = 0

Query: 15  LSEQDAMEIVLGKQSSYTKGMGYGPKPPSQKQAGGYSQEYVHALEDKLAKNEELLQTQRQ 74
           ++E +  E VLG++S Y KG+G+GPKP S  ++   S E+   LE +L + + L++TQ+Q
Sbjct: 16  MTEAEICERVLGQKSGYVKGLGFGPKPISFSKSRPSSSEHEIELEHRLVETQLLVETQQQ 75

Query: 75  --ETQR--------LFEMQRQEYERKFDSIEELFRRFTEGGGSS 108
             ETQ+        L + Q Q++ ++F   EE+ R      GSS
Sbjct: 76  QLETQQDRIDQLEALVQKQNQQHHQQF---EEILRHLRSSQGSS 116

BLAST of MC02g1326 vs. ExPASy TrEMBL
Match: A0A438KJW0 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_002255 PE=4 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 3.99e-04
Identity = 37/104 (35.58%), Postives = 59/104 (56.73%), Query Frame = 0

Query: 15  LSEQDAMEIVLGKQSSYTKGMGYGPKPPSQKQAGGYSQEYVHALEDKLAKNEELLQTQRQ 74
           ++E +  E VLG++S Y KG+G+GPKP S  ++   S E    LE +L + + L++TQ+Q
Sbjct: 16  MTEAEICERVLGQKSGYVKGLGFGPKPISFSKSRPSSSEREIELEHRLVETQLLVETQQQ 75

Query: 75  --ETQR--------LFEMQRQEYERKFDSIEELFRRFTEGGGSS 108
             ETQ+        L + Q Q++ ++F   EE+ R      GSS
Sbjct: 76  QLETQQDRIDQLEALVQKQNQQHHQQF---EEILRHLRSSQGSS 116

BLAST of MC02g1326 vs. ExPASy TrEMBL
Match: A0A438CMH8 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_093199 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 5.05e-04
Identity = 37/104 (35.58%), Postives = 60/104 (57.69%), Query Frame = 0

Query: 15  LSEQDAMEIVLGKQSSYTKGMGYGPKPPSQKQAGGYSQEYVHALEDKLAKNEELLQTQRQ 74
           ++E +  E VLG++S Y KG+G+GPKP S  ++   S E+   LE +L + + L++TQ+Q
Sbjct: 246 MTEAEICERVLGQKSGYVKGLGFGPKPISFSKSRPSSSEHEIELEHRLVETQLLVETQQQ 305

Query: 75  --ETQR--------LFEMQRQEYERKFDSIEELFRRFTEGGGSS 108
             ETQ+        L + Q Q++ ++F   EE+ R      GSS
Sbjct: 306 QLETQQDRIDQLEALVQKQNQQHHQQF---EEILRHLRSSQGSS 346

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022143616.11.27e-1345.54uncharacterized protein LOC111013476 [Momordica charantia][more]
XP_022148911.12.25e-1345.54uncharacterized protein LOC111017461 [Momordica charantia][more]
RVX02610.12.12e-0435.58hypothetical protein CK203_016442 [Vitis vinifera][more]
RVW22435.18.25e-0435.58hypothetical protein CK203_099249 [Vitis vinifera] >RVW55019.1 hypothetical prot... [more]
Match NameE-valueIdentityDescription
A0A6J1CQT56.13e-1445.54uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A6J1D6S91.09e-1345.54uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A438J0Y31.03e-0435.58Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_016442 PE=4 SV=1[more]
A0A438KJW03.99e-0435.58Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_002255 PE=4 SV=1[more]
A0A438CMH85.05e-0435.58Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_093199 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 55..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..50

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC02g1326.1MC02g1326.1mRNA