MC02g1325 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC02g1325
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC02: 14827675 .. 14827869 (-)
RNA-Seq ExpressionMC02g1325
SyntenyMC02g1325
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGCAGGATAAGTTCGATGTCGAAATATCTCAGCAACATGTTCATGGATATATTTTATATGAAATTGGATCTCGATTTATGGATTACCGAGCGAAATTACATCGAATTTATAGCAAGATAAGGGATCCAGCATGTGCTCGCCAAAAACTATATAAAGACATTAAACAAGAGGATTGGAATGTATTATGTGATAGA

mRNA sequence

TTGCAGGATAAGTTCGATGTCGAAATATCTCAGCAACATGTTCATGGATATATTTTATATGAAATTGGATCTCGATTTATGGATTACCGAGCGAAATTACATCGAATTTATAGCAAGATAAGGGATCCAGCATGTGCTCGCCAAAAACTATATAAAGACATTAAACAAGAGGATTGGAATGTATTATGTGATAGA

Coding sequence (CDS)

TTGCAGGATAAGTTCGATGTCGAAATATCTCAGCAACATGTTCATGGATATATTTTATATGAAATTGGATCTCGATTTATGGATTACCGAGCGAAATTACATCGAATTTATAGCAAGATAAGGGATCCAGCATGTGCTCGCCAAAAACTATATAAAGACATTAAACAAGAGGATTGGAATGTATTATGTGATAGA

Protein sequence

LQDKFDVEISQQHVHGYILYEIGSRFMDYRAKLHRIYSKIRDPACARQKLYKDIKQEDWNVLCDR
Homology
BLAST of MC02g1325 vs. NCBI nr
Match: XP_022159083.1 (uncharacterized protein LOC111025525 [Momordica charantia])

HSP 1 Score: 106 bits (265), Expect = 4.25e-27
Identity = 50/65 (76.92%), Postives = 54/65 (83.08%), Query Frame = 0

Query: 1   LQDKFDVEISQQHVHGYILYEIGSRFMDYRAKLHRIYSKIRDPACARQKLYKDIKQEDWN 60
           L +KF V+ISQ HVH YILYEIG+RF DYRAKLHR Y K RDPA ARQK YKDIKQE WN
Sbjct: 89  LLEKFAVDISQPHVHRYILYEIGTRFKDYRAKLHRHYKKSRDPARARQKPYKDIKQEXWN 148

Query: 61  VLCDR 65
           +LCDR
Sbjct: 149 ILCDR 153

BLAST of MC02g1325 vs. NCBI nr
Match: XP_022153681.1 (uncharacterized protein LOC111021138 [Momordica charantia])

HSP 1 Score: 104 bits (259), Expect = 1.44e-26
Identity = 50/65 (76.92%), Postives = 53/65 (81.54%), Query Frame = 0

Query: 1  LQDKFDVEISQQHVHGYILYEIGSRFMDYRAKLHRIYSKIRDPACARQKLYKDIKQEDWN 60
          L +KF V ISQ HVH YILYEIG+RF DYRAKLHR Y K RD A ARQK YKDIKQEDWN
Sbjct: 2  LLEKFVVVISQPHVHRYILYEIGTRFKDYRAKLHRHYKKSRDQAHARQKPYKDIKQEDWN 61

Query: 61 VLCDR 65
          +LCDR
Sbjct: 62 ILCDR 66

BLAST of MC02g1325 vs. NCBI nr
Match: XP_022143616.1 (uncharacterized protein LOC111013476 [Momordica charantia])

HSP 1 Score: 103 bits (257), Expect = 1.45e-25
Identity = 48/65 (73.85%), Postives = 55/65 (84.62%), Query Frame = 0

Query: 1  LQDKFDVEISQQHVHGYILYEIGSRFMDYRAKLHRIYSKIRDPACARQKLYKDIKQEDWN 60
          L +KF V+ISQ HVH YILYEIG+RF DYRAKL+R Y K+RD A ARQK YKDIKQEDWN
Sbjct: 2  LLEKFVVDISQPHVHRYILYEIGTRFKDYRAKLYRHYKKVRDLARARQKPYKDIKQEDWN 61

Query: 61 VLCDR 65
          +LCD+
Sbjct: 62 ILCDK 66

BLAST of MC02g1325 vs. NCBI nr
Match: XP_022148911.1 (uncharacterized protein LOC111017461 [Momordica charantia])

HSP 1 Score: 97.1 bits (240), Expect = 1.14e-22
Identity = 44/58 (75.86%), Postives = 50/58 (86.21%), Query Frame = 0

Query: 8  EISQQHVHGYILYEIGSRFMDYRAKLHRIYSKIRDPACARQKLYKDIKQEDWNVLCDR 65
          +ISQ HVH YILYEIG+RF DYRAKL+R Y K+RD A ARQK YKDIKQEDWN+LCD+
Sbjct: 14 DISQLHVHRYILYEIGTRFKDYRAKLYRHYKKVRDLARARQKPYKDIKQEDWNILCDK 71

BLAST of MC02g1325 vs. NCBI nr
Match: XP_038895321.1 (uncharacterized protein LOC120083572 isoform X3 [Benincasa hispida])

HSP 1 Score: 77.8 bits (190), Expect = 6.33e-15
Identity = 35/65 (53.85%), Postives = 45/65 (69.23%), Query Frame = 0

Query: 1   LQDKFDVEISQQHVHGYILYEIGSRFMDYRAKLHRIYSKIRDPACARQKLYKDIKQEDWN 60
           L ++FDV+ISQ H+  YI YEIG+RF DYR  L++ Y K  DP  AR+  YK    +DWN
Sbjct: 209 LLNQFDVDISQPHIKRYIYYEIGNRFKDYRWTLYKHYQKYADPVEARRNPYKYTTTDDWN 268

Query: 61  VLCDR 65
           +LCDR
Sbjct: 269 ILCDR 273

BLAST of MC02g1325 vs. ExPASy TrEMBL
Match: A0A6J1DXU5 (uncharacterized protein LOC111025525 OS=Momordica charantia OX=3673 GN=LOC111025525 PE=4 SV=1)

HSP 1 Score: 106 bits (265), Expect = 2.06e-27
Identity = 50/65 (76.92%), Postives = 54/65 (83.08%), Query Frame = 0

Query: 1   LQDKFDVEISQQHVHGYILYEIGSRFMDYRAKLHRIYSKIRDPACARQKLYKDIKQEDWN 60
           L +KF V+ISQ HVH YILYEIG+RF DYRAKLHR Y K RDPA ARQK YKDIKQE WN
Sbjct: 89  LLEKFAVDISQPHVHRYILYEIGTRFKDYRAKLHRHYKKSRDPARARQKPYKDIKQEXWN 148

Query: 61  VLCDR 65
           +LCDR
Sbjct: 149 ILCDR 153

BLAST of MC02g1325 vs. ExPASy TrEMBL
Match: A0A6J1DLF1 (uncharacterized protein LOC111021138 OS=Momordica charantia OX=3673 GN=LOC111021138 PE=4 SV=1)

HSP 1 Score: 104 bits (259), Expect = 6.97e-27
Identity = 50/65 (76.92%), Postives = 53/65 (81.54%), Query Frame = 0

Query: 1  LQDKFDVEISQQHVHGYILYEIGSRFMDYRAKLHRIYSKIRDPACARQKLYKDIKQEDWN 60
          L +KF V ISQ HVH YILYEIG+RF DYRAKLHR Y K RD A ARQK YKDIKQEDWN
Sbjct: 2  LLEKFVVVISQPHVHRYILYEIGTRFKDYRAKLHRHYKKSRDQAHARQKPYKDIKQEDWN 61

Query: 61 VLCDR 65
          +LCDR
Sbjct: 62 ILCDR 66

BLAST of MC02g1325 vs. ExPASy TrEMBL
Match: A0A6J1CQT5 (uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013476 PE=4 SV=1)

HSP 1 Score: 103 bits (257), Expect = 7.02e-26
Identity = 48/65 (73.85%), Postives = 55/65 (84.62%), Query Frame = 0

Query: 1  LQDKFDVEISQQHVHGYILYEIGSRFMDYRAKLHRIYSKIRDPACARQKLYKDIKQEDWN 60
          L +KF V+ISQ HVH YILYEIG+RF DYRAKL+R Y K+RD A ARQK YKDIKQEDWN
Sbjct: 2  LLEKFVVDISQPHVHRYILYEIGTRFKDYRAKLYRHYKKVRDLARARQKPYKDIKQEDWN 61

Query: 61 VLCDR 65
          +LCD+
Sbjct: 62 ILCDK 66

BLAST of MC02g1325 vs. ExPASy TrEMBL
Match: A0A6J1D6S9 (uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017461 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 5.51e-23
Identity = 44/58 (75.86%), Postives = 50/58 (86.21%), Query Frame = 0

Query: 8  EISQQHVHGYILYEIGSRFMDYRAKLHRIYSKIRDPACARQKLYKDIKQEDWNVLCDR 65
          +ISQ HVH YILYEIG+RF DYRAKL+R Y K+RD A ARQK YKDIKQEDWN+LCD+
Sbjct: 14 DISQLHVHRYILYEIGTRFKDYRAKLYRHYKKVRDLARARQKPYKDIKQEDWNILCDK 71

BLAST of MC02g1325 vs. ExPASy TrEMBL
Match: A0A067DNP7 (Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g041625mg PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.82e-09
Identity = 22/61 (36.07%), Postives = 39/61 (63.93%), Query Frame = 0

Query: 4  KFDVEISQQHVHGYILYEIGSRFMDYRAKLHRIYSKIRDPACARQKLYKDIKQEDWNVLC 63
          KF+ ++S  H+  Y+ + +  R++D+R   H+ + K   P+ ARQ  YK+I Q+DW+ LC
Sbjct: 2  KFEFDMSMPHILNYVTHSMVERYLDHRYNCHKHFKKYATPSEARQHAYKNISQQDWDWLC 61

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022159083.14.25e-2776.92uncharacterized protein LOC111025525 [Momordica charantia][more]
XP_022153681.11.44e-2676.92uncharacterized protein LOC111021138 [Momordica charantia][more]
XP_022143616.11.45e-2573.85uncharacterized protein LOC111013476 [Momordica charantia][more]
XP_022148911.11.14e-2275.86uncharacterized protein LOC111017461 [Momordica charantia][more]
XP_038895321.16.33e-1553.85uncharacterized protein LOC120083572 isoform X3 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A6J1DXU52.06e-2776.92uncharacterized protein LOC111025525 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DLF16.97e-2776.92uncharacterized protein LOC111021138 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
A0A6J1CQT57.02e-2673.85uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A6J1D6S95.51e-2375.86uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A067DNP73.82e-0936.07Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g041625m... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC02g1325.1MC02g1325.1mRNA