MC02g1293 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC02g1293
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC02: 12840290 .. 12840367 (+)
RNA-Seq ExpressionMC02g1293
SyntenyMC02g1293
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGAATTGATAGAAAATCATCCATAGAAAATGAGCCAAGGACTCTCAAAATGCACCAAATTCAATTTGCAAGG

mRNA sequence

ATGGGAAGAATTGATAGAAAATCATCCATAGAAAATGAGCCAAGGACTCTCAAAATGCACCAAATTCAATTTGCAAGG

Coding sequence (CDS)

ATGGGAAGAATTGATAGAAAATCATCCATAGAAAATGAGCCAAGGACTCTCAAAATGCACCAAATTCAATTTGCAAGG

Protein sequence

MGRIDRKSSIENEPRTLKMHQIQFAR
Homology
BLAST of MC02g1293 vs. NCBI nr
Match: XP_022150869.1 (uncharacterized protein LOC111018915 [Momordica charantia])

HSP 1 Score: 54.3 bits (129), Expect = 3.11e-08
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 0

Query: 1  MGRIDRKSSIENEPRTLKMHQIQFAR 26
          MGRIDRKSSIENEPRTLKMHQIQFAR
Sbjct: 6  MGRIDRKSSIENEPRTLKMHQIQFAR 31

BLAST of MC02g1293 vs. NCBI nr
Match: XP_011649401.1 (uncharacterized protein LOC105434623 [Cucumis sativus] >KGN62156.1 hypothetical protein Csa_006615 [Cucumis sativus])

HSP 1 Score: 52.0 bits (123), Expect = 2.26e-07
Identity = 25/26 (96.15%), Postives = 25/26 (96.15%), Query Frame = 0

Query: 1  MGRIDRKSSIENEPRTLKMHQIQFAR 26
          MG IDRKSSIENEPRTLKMHQIQFAR
Sbjct: 1  MGSIDRKSSIENEPRTLKMHQIQFAR 26

BLAST of MC02g1293 vs. NCBI nr
Match: XP_022947894.1 (uncharacterized protein LOC111451648 [Cucurbita moschata])

HSP 1 Score: 51.2 bits (121), Expect = 4.33e-07
Identity = 25/26 (96.15%), Postives = 25/26 (96.15%), Query Frame = 0

Query: 1  MGRIDRKSSIENEPRTLKMHQIQFAR 26
          M RIDRKSSIENEPRTLKMHQIQFAR
Sbjct: 1  MERIDRKSSIENEPRTLKMHQIQFAR 26

BLAST of MC02g1293 vs. NCBI nr
Match: XP_038902606.1 (uncharacterized protein LOC120089256 [Benincasa hispida])

HSP 1 Score: 51.2 bits (121), Expect = 4.33e-07
Identity = 24/26 (92.31%), Postives = 25/26 (96.15%), Query Frame = 0

Query: 1  MGRIDRKSSIENEPRTLKMHQIQFAR 26
          MG IDRKSSIENEPRTL+MHQIQFAR
Sbjct: 1  MGNIDRKSSIENEPRTLRMHQIQFAR 26

BLAST of MC02g1293 vs. NCBI nr
Match: KAG6605318.1 (hypothetical protein SDJN03_02635, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035274.1 hypothetical protein SDJN02_02069 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 51.2 bits (121), Expect = 4.33e-07
Identity = 25/26 (96.15%), Postives = 25/26 (96.15%), Query Frame = 0

Query: 1  MGRIDRKSSIENEPRTLKMHQIQFAR 26
          M RIDRKSSIENEPRTLKMHQIQFAR
Sbjct: 1  MERIDRKSSIENEPRTLKMHQIQFAR 26

BLAST of MC02g1293 vs. ExPASy TrEMBL
Match: A0A6J1DBC1 (uncharacterized protein LOC111018915 OS=Momordica charantia OX=3673 GN=LOC111018915 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.51e-08
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 0

Query: 1  MGRIDRKSSIENEPRTLKMHQIQFAR 26
          MGRIDRKSSIENEPRTLKMHQIQFAR
Sbjct: 6  MGRIDRKSSIENEPRTLKMHQIQFAR 31

BLAST of MC02g1293 vs. ExPASy TrEMBL
Match: A0A0A0LQ89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302230 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.09e-07
Identity = 25/26 (96.15%), Postives = 25/26 (96.15%), Query Frame = 0

Query: 1  MGRIDRKSSIENEPRTLKMHQIQFAR 26
          MG IDRKSSIENEPRTLKMHQIQFAR
Sbjct: 1  MGSIDRKSSIENEPRTLKMHQIQFAR 26

BLAST of MC02g1293 vs. ExPASy TrEMBL
Match: A0A6J1G887 (uncharacterized protein LOC111451648 OS=Cucurbita moschata OX=3662 GN=LOC111451648 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.10e-07
Identity = 25/26 (96.15%), Postives = 25/26 (96.15%), Query Frame = 0

Query: 1  MGRIDRKSSIENEPRTLKMHQIQFAR 26
          M RIDRKSSIENEPRTLKMHQIQFAR
Sbjct: 1  MERIDRKSSIENEPRTLKMHQIQFAR 26

BLAST of MC02g1293 vs. ExPASy TrEMBL
Match: A0A1S3CDH2 (uncharacterized protein LOC103499638 OS=Cucumis melo OX=3656 GN=LOC103499638 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.25e-06
Identity = 24/26 (92.31%), Postives = 25/26 (96.15%), Query Frame = 0

Query: 1  MGRIDRKSSIENEPRTLKMHQIQFAR 26
          MG IDRKSSIENEPRTLKM+QIQFAR
Sbjct: 1  MGSIDRKSSIENEPRTLKMNQIQFAR 26

BLAST of MC02g1293 vs. ExPASy TrEMBL
Match: A0A6J1I9E9 (uncharacterized protein LOC111470407 OS=Cucurbita maxima OX=3661 GN=LOC111470407 PE=4 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.34e-06
Identity = 23/26 (88.46%), Postives = 25/26 (96.15%), Query Frame = 0

Query: 1  MGRIDRKSSIENEPRTLKMHQIQFAR 26
          MGR+DRKSSIE EPRTLKM+QIQFAR
Sbjct: 1  MGRMDRKSSIETEPRTLKMNQIQFAR 26

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022150869.13.11e-08100.00uncharacterized protein LOC111018915 [Momordica charantia][more]
XP_011649401.12.26e-0796.15uncharacterized protein LOC105434623 [Cucumis sativus] >KGN62156.1 hypothetical ... [more]
XP_022947894.14.33e-0796.15uncharacterized protein LOC111451648 [Cucurbita moschata][more]
XP_038902606.14.33e-0792.31uncharacterized protein LOC120089256 [Benincasa hispida][more]
KAG6605318.14.33e-0796.15hypothetical protein SDJN03_02635, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A6J1DBC11.51e-08100.00uncharacterized protein LOC111018915 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A0A0LQ891.09e-0796.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G302230 PE=4 SV=1[more]
A0A6J1G8872.10e-0796.15uncharacterized protein LOC111451648 OS=Cucurbita moschata OX=3662 GN=LOC1114516... [more]
A0A1S3CDH21.25e-0692.31uncharacterized protein LOC103499638 OS=Cucumis melo OX=3656 GN=LOC103499638 PE=... [more]
A0A6J1I9E91.34e-0688.46uncharacterized protein LOC111470407 OS=Cucurbita maxima OX=3661 GN=LOC111470407... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC02g1293.1MC02g1293.1mRNA