MC02g1285 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g1285
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	MYB transcription factor
Location	MC02: 12598907 .. 12600126 (-)
RNA-Seq Expression	MC02g1285
Synteny	MC02g1285

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATCCAGCAGTAGCAGCGGCGGCAGTGGCGGCGGAAGCTGCTACAGAGGCCACTGGAGGCCGGCGGAGGACGACAAACTCCGGCGACTTGTGGAGCAGTATGGCCACCAGAACTGGAATTTTATTGCAGAACATTTTGAGAGCAGATCAGGTAAATTAAATAATTTTTTGTAATTATATCCAAATCTCAAACTCCGTCTGACGAGGAAATTTTTGTTCATTCCGATGCGTGTTTGGTTAGAAAGCTGCTTTCTTGAACGTTTTCGTTTCGATGGCAGCGATTTAATCTCTGAATTTTAACGTACAACGTTTAAAATTAATAAGATTTTAGTCCTTAGTTAAAAATTCTCAAAACAAAGTTGTTTTTTTAAAACTAAATTCTTCATTTTGACCTGATTTTTACGATGGGAACTAAATCGTTTTTAAATTTTAATAGACATGTTACGTACTAATTTTATGTTTTATTTTGACAAGATTAAGATCAATAACTTCACTTTAATTAACCCGTAAAGAGACTAAATAATTTTTAGATCCTAATTTCTTAAATACTAAGATTATTGATACTTCGCCTTCACCACCACATTTCGCAACAAAAACTGAACCATAATAAAATTTACACTACAGAGAAATTCACTAAAAGTCGTCAAAGCTAAAACATATGATGAAGTTTAAGCACTATATACAGATTAAATTGTTTTACACTATTAAAATTTAGAGACTAAACGGTAACGAAAAGTACAGAGACTAAATATGTTTTTTAAATGTCGGTTTTTTTTGGTTGGGAAGGAAAAAGCTGCAGATTGAGATGGTACAACCAGCTAGATCCAAGCATAAACAAGGACCCATTTACAGAAGAGGAAGAAGAAAGGCTTCTAATGTACCAGCAGCTCCATGGGAACAAATGGGCACTGATAGCTCGACATTTCAAAGGAAGAACCGACAACGCGGTCAAGAATCACTTCCATGTCATCATGGCCCGACGTCGAAGAGAACGCTTCACAATCTTCTCCAACAACAACAACCTTAATAACAAACAGCAACGCCTACTTAGGACCTTAATCCCCTCGAAGAATAACTTTCCAAACCATCTTCATCATCACAACGTCGTTAAATGGACTCCTCTCGCGGCGGCACCACCGGCGGCGACCGCACCGGAGGGGGAGGAGGAGGAGAAGAAGAAGAGGGTTCCATTTATAGACTTTCTTGGTATGGGAAGCTCT

mRNA sequence

AGATCCAGCAGTAGCAGCGGCGGCAGTGGCGGCGGAAGCTGCTACAGAGGCCACTGGAGGCCGGCGGAGGACGACAAACTCCGGCGACTTGTGGAGCAGTATGGCCACCAGAACTGGAATTTTATTGCAGAACATTTTGAGAGCAGATCAGGAAAAAGCTGCAGATTGAGATGGTACAACCAGCTAGATCCAAGCATAAACAAGGACCCATTTACAGAAGAGGAAGAAGAAAGGCTTCTAATGTACCAGCAGCTCCATGGGAACAAATGGGCACTGATAGCTCGACATTTCAAAGGAAGAACCGACAACGCGGTCAAGAATCACTTCCATGTCATCATGGCCCGACGTCGAAGAGAACGCTTCACAATCTTCTCCAACAACAACAACCTTAATAACAAACAGCAACGCCTACTTAGGACCTTAATCCCCTCGAAGAATAACTTTCCAAACCATCTTCATCATCACAACGTCGTTAAATGGACTCCTCTCGCGGCGGCACCACCGGCGGCGACCGCACCGGAGGGGGAGGAGGAGGAGAAGAAGAAGAGGGTTCCATTTATAGACTTTCTTGGTATGGGAAGCTCT

Coding sequence (CDS)

AGATCCAGCAGTAGCAGCGGCGGCAGTGGCGGCGGAAGCTGCTACAGAGGCCACTGGAGGCCGGCGGAGGACGACAAACTCCGGCGACTTGTGGAGCAGTATGGCCACCAGAACTGGAATTTTATTGCAGAACATTTTGAGAGCAGATCAGGAAAAAGCTGCAGATTGAGATGGTACAACCAGCTAGATCCAAGCATAAACAAGGACCCATTTACAGAAGAGGAAGAAGAAAGGCTTCTAATGTACCAGCAGCTCCATGGGAACAAATGGGCACTGATAGCTCGACATTTCAAAGGAAGAACCGACAACGCGGTCAAGAATCACTTCCATGTCATCATGGCCCGACGTCGAAGAGAACGCTTCACAATCTTCTCCAACAACAACAACCTTAATAACAAACAGCAACGCCTACTTAGGACCTTAATCCCCTCGAAGAATAACTTTCCAAACCATCTTCATCATCACAACGTCGTTAAATGGACTCCTCTCGCGGCGGCACCACCGGCGGCGACCGCACCGGAGGGGGAGGAGGAGGAGAAGAAGAAGAGGGTTCCATTTATAGACTTTCTTGGTATGGGAAGCTCT

Protein sequence

RSSSSSGGSGGGSCYRGHWRPAEDDKLRRLVEQYGHQNWNFIAEHFESRSGKSCRLRWYNQLDPSINKDPFTEEEEERLLMYQQLHGNKWALIARHFKGRTDNAVKNHFHVIMARRRRERFTIFSNNNNLNNKQQRLLRTLIPSKNNFPNHLHHHNVVKWTPLAAAPPAATAPEGEEEEKKKRVPFIDFLGMGSS

Homology

[Close]

BLAST of MC02g1285 vs. ExPASy Swiss-Prot
Match: Q6R0C4 (Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.4e-43
Identity = 98/198 (49.49%), Postives = 124/198 (62.63%), Query Frame = 0


Query: 14  CYRGHWRPAEDDKLRRLVEQYGHQNWNFIAEHFESRSGKSCRLRWYNQLDPSINKDPFTE 73
           C RGHWRPAED+KLR LVEQ+G  NWN IA+    RSGKSCRLRW+NQLDP IN++PFTE
Sbjct: 3   CSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFTE 62

Query: 74  EEEERLLMYQQLHGNKWALIARHFKGRTDNAVKNHFHVIMARRRRER------------- 133
           EEEERLL   ++HGN+W++IAR F GRTDNAVKNH+HVIMARR RER             
Sbjct: 63  EEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERSKLRPRGLGHDGT 122

Query: 134 --FTIFSNNNNLNNKQQRLLRTLIPSKNNFP---NHLHHHNVVK---WTPLAAAPPAATA 191
              T    N    +K++RL  T   +  NFP   +H++H  V+K      +         
Sbjct: 123 VAATGMIGNYKDCDKERRLATT---TAINFPYQFSHINHFQVLKEFLTGKIGFRNSTTPI 182

[Close]

BLAST of MC02g1285 vs. ExPASy Swiss-Prot
Match: Q9FX36 (Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.3e-41
Identity = 77/106 (72.64%), Postives = 89/106 (83.96%), Query Frame = 0


Query: 14  CYRGHWRPAEDDKLRRLVEQYGHQNWNFIAEHFESRSGKSCRLRWYNQLDPSINKDPFTE 73
           C RGHWRPAED+KL+ LVEQYG  NWN IA     RSGKSCRLRW+NQLDP IN++PFTE
Sbjct: 4   CSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFTE 63

Query: 74  EEEERLLMYQQLHGNKWALIARHFKGRTDNAVKNHFHVIMARRRRE 120
           EEEERLL   ++HGN+W++IAR F GRTDNAVKNH+HVIMARR R+
Sbjct: 64  EEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQ 109

[Close]

BLAST of MC02g1285 vs. ExPASy Swiss-Prot
Match: Q5NBM8 (Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV=2)

HSP 1 Score: 169.1 bits (427), Expect = 5.0e-41
Identity = 89/157 (56.69%), Postives = 103/157 (65.61%), Query Frame = 0


Query: 4   SSSGGSGGG----SCYRGHWRPAEDDKLRRLVEQYGHQNWNFIAEHFESRSGKSCRLRWY 63
           +  GG GGG     C RGHWRPAED KL+ LV QYG QNWN IAE  + RSGKSCRLRW+
Sbjct: 33  TEEGGHGGGVQGKLCARGHWRPAEDAKLKDLVAQYGPQNWNLIAEKLDGRSGKSCRLRWF 92

Query: 64  NQLDPSINKDPFTEEEEERLLMYQQLHGNKWALIARHFKGRTDNAVKNHFHVIMARRRRE 123
           NQLDP IN+  FTEEEEERL+   + +GNKWALIAR F GRTDNAVKNH+HV+MARR RE
Sbjct: 93  NQLDPRINRRAFTEEEEERLMAAHRAYGNKWALIARLFPGRTDNAVKNHWHVLMARRHRE 152

Query: 124 RFTIFSNNNNLNNKQQRLLRTLIPSKNNFPNHLHHHN 157
           +   F      ++          P        LHHH+
Sbjct: 153 QSGAFRRRKPSSSSASPAPAPAPPPPPQPVVALHHHH 189

[Close]

BLAST of MC02g1285 vs. ExPASy Swiss-Prot
Match: Q9SEZ4 (Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.1e-39
Identity = 79/126 (62.70%), Postives = 94/126 (74.60%), Query Frame = 0


Query: 5   SSGGSGGGSCYRGHWRPAEDDKLRRLVEQYGHQNWNFIAEHFESRSGKSCRLRWYNQLDP 64
           S G S   S  RGHWRPAED KL+ LV  YG QNWN IAE  + RSGKSCRLRW+NQLDP
Sbjct: 96  SCGHSSKASVSRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDP 155

Query: 65  SINKDPFTEEEEERLLMYQQLHGNKWALIARHFKGRTDNAVKNHFHVIMARRRRERFTIF 124
            IN+  FTEEEEERL+   +L+GNKWA+IAR F GRTDN+VKNH+HVIMAR+ RE+ + +
Sbjct: 156 RINRRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFREQSSSY 215

Query: 125 SNNNNL 131
                +
Sbjct: 216 RRRKTM 221

[Close]

BLAST of MC02g1285 vs. ExPASy Swiss-Prot
Match: Q6R053 (Transcription factor MYB56 OS=Arabidopsis thaliana OX=3702 GN=MYB56 PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.1e-39
Identity = 76/106 (71.70%), Postives = 84/106 (79.25%), Query Frame = 0


Query: 14  CYRGHWRPAEDDKLRRLVEQYGHQNWNFIAEHFESRSGKSCRLRWYNQLDPSINKDPFTE 73
           C RGHWRP ED KL+ LV Q+G QNWN I+ H   RSGKSCRLRW+NQLDP INK  FTE
Sbjct: 91  CSRGHWRPTEDAKLKELVAQFGPQNWNLISNHLLGRSGKSCRLRWFNQLDPRINKRAFTE 150

Query: 74  EEEERLLMYQQLHGNKWALIARHFKGRTDNAVKNHFHVIMARRRRE 120
           EEE RLL   + +GNKWALI+R F GRTDNAVKNH+HVIMARR RE
Sbjct: 151 EEEFRLLAAHRAYGNKWALISRLFPGRTDNAVKNHWHVIMARRTRE 196

[Close]

BLAST of MC02g1285 vs. NCBI nr
Match: XP_022156671.1 (transcription factor MYB52 [Momordica charantia])

HSP 1 Score: 407 bits (1045), Expect = 2.51e-143
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   RSSSSSGGSGGGSCYRGHWRPAEDDKLRRLVEQYGHQNWNFIAEHFESRSGKSCRLRWYN 60
           RSSSSSGGSGGGSCYRGHWRPAEDDKLRRLVEQYGHQNWNFIAEHFESRSGKSCRLRWYN
Sbjct: 3   RSSSSSGGSGGGSCYRGHWRPAEDDKLRRLVEQYGHQNWNFIAEHFESRSGKSCRLRWYN 62

Query: 61  QLDPSINKDPFTEEEEERLLMYQQLHGNKWALIARHFKGRTDNAVKNHFHVIMARRRRER 120
           QLDPSINKDPFTEEEEERLLMYQQLHGNKWALIARHFKGRTDNAVKNHFHVIMARRRRER
Sbjct: 63  QLDPSINKDPFTEEEEERLLMYQQLHGNKWALIARHFKGRTDNAVKNHFHVIMARRRRER 122

Query: 121 FTIFSNNNNLNNKQQRLLRTLIPSKNNFPNHLHHHNVVKWTPLAAAPPAATAPEGEEEEK 180
           FTIFSNNNNLNNKQQRLLRTLIPSKNNFPNHLHHHNVVKWTPLAAAPPAATAPEGEEEEK
Sbjct: 123 FTIFSNNNNLNNKQQRLLRTLIPSKNNFPNHLHHHNVVKWTPLAAAPPAATAPEGEEEEK 182

Query: 181 KKRVPFIDFLGMGSS 195
           KKRVPFIDFLGMGSS
Sbjct: 183 KKRVPFIDFLGMGSS 197

[Close]

BLAST of MC02g1285 vs. NCBI nr
Match: XP_038902736.1 (transcription factor MYB52-like [Benincasa hispida] >XP_038902737.1 transcription factor MYB52-like [Benincasa hispida])

HSP 1 Score: 277 bits (709), Expect = 5.84e-92
Identity = 141/216 (65.28%), Postives = 163/216 (75.46%), Query Frame = 0


Query: 1   RSSSSSGGSGGG-------SCYRGHWRPAEDDKLRRLVEQYGHQNWNFIAEHFESRSGKS 60
           RSSSSSGGS GG       SCYRGHWRPAED+KLR+LVEQ+G QNWN+IAEHFE RSGKS
Sbjct: 5   RSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKS 64

Query: 61  CRLRWYNQLDPSINKDPFTEEEEERLLMYQQLHGNKWALIARHFKGRTDNAVKNHFHVIM 120
           CRLRWYNQLDP+INK+PF+EEEEERLLM+QQLHGNKWALIARHFKGRTDNAVKNH+HVIM
Sbjct: 65  CRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIM 124

Query: 121 ARRRRERFTIFSNNNNLNNKQQRLLRTLIPSKNNFPNHLHHHNVVKWTPLAAAPP----- 180
           ARRRRERFTIF+NNNN+N + +    +L+P              +KWTPL A  P     
Sbjct: 125 ARRRRERFTIFTNNNNINLRNR---HSLLPFSKT--------TAIKWTPLTATAPVLLGN 184

Query: 181 ---------AATAPEGEEEEKKKRVPFIDFLGMGSS 195
                    A  +   E +++K+R+PFIDFLGMGSS
Sbjct: 185 GRGKSSLPTAVASGSSESDDQKRRIPFIDFLGMGSS 209

[Close]

BLAST of MC02g1285 vs. NCBI nr
Match: KAG6571346.1 (Transcription factor MYB52, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 276 bits (706), Expect = 2.35e-91
Identity = 147/216 (68.06%), Postives = 163/216 (75.46%), Query Frame = 0


Query: 3   SSSSGGSGGG-----------SCYRGHWRPAEDDKLRRLVEQYGHQNWNFIAEHFESRSG 62
           SSSSGGS GG           SCYRGHWRPAED+KLR+LVEQ+G QNWN+IAEHFE RSG
Sbjct: 6   SSSSGGSSGGVGGGGCGNSSVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSG 65

Query: 63  KSCRLRWYNQLDPSINKDPFTEEEEERLLMYQQLHGNKWALIARHFKGRTDNAVKNHFHV 122
           KSCRLRWYNQLDP+INK+PFTEEEEERLLM+QQLHGNKWALIARHFKGRTDNAVKNH+HV
Sbjct: 66  KSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHV 125

Query: 123 IMARRRRERFTIFSNNNNLNNKQQRLLRTLIPSKNNFPNHLHHHNVVKWTPLAA------ 182
           IMARRRRERFTIF+N+NN NN   R   +L+P      +       VKWTPL A      
Sbjct: 126 IMARRRRERFTIFTNHNN-NNNILRTRHSLLPFSKVLQSS-QQKTAVKWTPLMATTVLRH 185

Query: 183 -----APPAATAPEGEE-EEKKKRVPFIDFLGMGSS 195
                AP AA     +E EE+K+RVPFIDFLGMGSS
Sbjct: 186 GGGMSAPTAAVVSGSDEREEQKRRVPFIDFLGMGSS 219

[Close]

BLAST of MC02g1285 vs. NCBI nr
Match: XP_022971627.1 (transcription factor CSA-like [Cucurbita maxima])

HSP 1 Score: 274 bits (701), Expect = 1.31e-90
Identity = 145/216 (67.13%), Postives = 161/216 (74.54%), Query Frame = 0


Query: 3   SSSSGGSGGG-----------SCYRGHWRPAEDDKLRRLVEQYGHQNWNFIAEHFESRSG 62
           SSSSGGS GG           SCYRGHWRPAED+KLR+LVEQ G QNWN+IAEHFE RSG
Sbjct: 6   SSSSGGSSGGVGGGGCGNSSVSCYRGHWRPAEDNKLRQLVEQLGPQNWNYIAEHFEGRSG 65

Query: 63  KSCRLRWYNQLDPSINKDPFTEEEEERLLMYQQLHGNKWALIARHFKGRTDNAVKNHFHV 122
           KSCRLRWYNQLDP+INK+PFTEEEEERLLM+QQLHGNKWALIARHFKGRTDNAVKNH+HV
Sbjct: 66  KSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHV 125

Query: 123 IMARRRRERFTIFSNNNNLNNKQQRLLRTLIPSKNNFPNHLHHHNVVKWTPLAAAP---- 182
           IMARRRRERFTIF+N+NN  N   R   +L+P      +  H    +KWTPL A      
Sbjct: 126 IMARRRRERFTIFTNHNN--NNILRTRHSLLPFSKVLQSS-HQKTAIKWTPLMATTVLRH 185

Query: 183 ------PAATAPEG--EEEEKKKRVPFIDFLGMGSS 195
                 P AT   G  E E++K+RVPFIDFLGMGSS
Sbjct: 186 GGGMLAPTATVAVGSDEREDQKRRVPFIDFLGMGSS 218

[Close]

BLAST of MC02g1285 vs. NCBI nr
Match: XP_023512391.1 (transcription factor CSA-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 274 bits (701), Expect = 1.35e-90
Identity = 144/217 (66.36%), Postives = 162/217 (74.65%), Query Frame = 0


Query: 3   SSSSGGSGGG------------SCYRGHWRPAEDDKLRRLVEQYGHQNWNFIAEHFESRS 62
           SSSSGGS GG            SCYRGHWRPAED+KLR+LVEQ+G QNWN+IAEHFE RS
Sbjct: 6   SSSSGGSSGGVGGSGGCGNSSVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRS 65

Query: 63  GKSCRLRWYNQLDPSINKDPFTEEEEERLLMYQQLHGNKWALIARHFKGRTDNAVKNHFH 122
           GKSCRLRWYNQLDP+INK+PFTEEEEERLLM+QQLHGNKWALIARHFKGRTDNAVKNH+H
Sbjct: 66  GKSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYH 125

Query: 123 VIMARRRRERFTIFSNNNNLNNKQQRLLRTLIPSKNNFPNHLHHHNVVKWTPLAA----- 182
           VIMARRRRERFTIF+N+NN  N   R   +L+P      +  H    +KWTPL A     
Sbjct: 126 VIMARRRRERFTIFTNHNN--NNILRTRHSLLPFSKVLQSS-HQKTAIKWTPLMATTVLR 185

Query: 183 -----APPAATAPEGEE--EEKKKRVPFIDFLGMGSS 195
                + P A    G +  EE+K+RVPFIDFLGMGSS
Sbjct: 186 HGGGMSAPTAAVVSGSDGREEQKRRVPFIDFLGMGSS 219

[Close]

BLAST of MC02g1285 vs. ExPASy TrEMBL
Match: A0A6J1DVM9 (transcription factor MYB52 OS=Momordica charantia OX=3673 GN=LOC111023523 PE=4 SV=1)

HSP 1 Score: 407 bits (1045), Expect = 1.21e-143
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   RSSSSSGGSGGGSCYRGHWRPAEDDKLRRLVEQYGHQNWNFIAEHFESRSGKSCRLRWYN 60
           RSSSSSGGSGGGSCYRGHWRPAEDDKLRRLVEQYGHQNWNFIAEHFESRSGKSCRLRWYN
Sbjct: 3   RSSSSSGGSGGGSCYRGHWRPAEDDKLRRLVEQYGHQNWNFIAEHFESRSGKSCRLRWYN 62

Query: 61  QLDPSINKDPFTEEEEERLLMYQQLHGNKWALIARHFKGRTDNAVKNHFHVIMARRRRER 120
           QLDPSINKDPFTEEEEERLLMYQQLHGNKWALIARHFKGRTDNAVKNHFHVIMARRRRER
Sbjct: 63  QLDPSINKDPFTEEEEERLLMYQQLHGNKWALIARHFKGRTDNAVKNHFHVIMARRRRER 122

Query: 121 FTIFSNNNNLNNKQQRLLRTLIPSKNNFPNHLHHHNVVKWTPLAAAPPAATAPEGEEEEK 180
           FTIFSNNNNLNNKQQRLLRTLIPSKNNFPNHLHHHNVVKWTPLAAAPPAATAPEGEEEEK
Sbjct: 123 FTIFSNNNNLNNKQQRLLRTLIPSKNNFPNHLHHHNVVKWTPLAAAPPAATAPEGEEEEK 182

Query: 181 KKRVPFIDFLGMGSS 195
           KKRVPFIDFLGMGSS
Sbjct: 183 KKRVPFIDFLGMGSS 197

[Close]

BLAST of MC02g1285 vs. ExPASy TrEMBL
Match: A0A6J1I2H4 (transcription factor CSA-like OS=Cucurbita maxima OX=3661 GN=LOC111470309 PE=4 SV=1)

HSP 1 Score: 274 bits (701), Expect = 6.33e-91
Identity = 145/216 (67.13%), Postives = 161/216 (74.54%), Query Frame = 0


Query: 3   SSSSGGSGGG-----------SCYRGHWRPAEDDKLRRLVEQYGHQNWNFIAEHFESRSG 62
           SSSSGGS GG           SCYRGHWRPAED+KLR+LVEQ G QNWN+IAEHFE RSG
Sbjct: 6   SSSSGGSSGGVGGGGCGNSSVSCYRGHWRPAEDNKLRQLVEQLGPQNWNYIAEHFEGRSG 65

Query: 63  KSCRLRWYNQLDPSINKDPFTEEEEERLLMYQQLHGNKWALIARHFKGRTDNAVKNHFHV 122
           KSCRLRWYNQLDP+INK+PFTEEEEERLLM+QQLHGNKWALIARHFKGRTDNAVKNH+HV
Sbjct: 66  KSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHV 125

Query: 123 IMARRRRERFTIFSNNNNLNNKQQRLLRTLIPSKNNFPNHLHHHNVVKWTPLAAAP---- 182
           IMARRRRERFTIF+N+NN  N   R   +L+P      +  H    +KWTPL A      
Sbjct: 126 IMARRRRERFTIFTNHNN--NNILRTRHSLLPFSKVLQSS-HQKTAIKWTPLMATTVLRH 185

Query: 183 ------PAATAPEG--EEEEKKKRVPFIDFLGMGSS 195
                 P AT   G  E E++K+RVPFIDFLGMGSS
Sbjct: 186 GGGMLAPTATVAVGSDEREDQKRRVPFIDFLGMGSS 218

[Close]

BLAST of MC02g1285 vs. ExPASy TrEMBL
Match: A0A6J1EVU5 (transcription factor CSA-like OS=Cucurbita moschata OX=3662 GN=LOC111438332 PE=4 SV=1)

HSP 1 Score: 274 bits (700), Expect = 8.99e-91
Identity = 146/216 (67.59%), Postives = 162/216 (75.00%), Query Frame = 0


Query: 3   SSSSGGSGGG-----------SCYRGHWRPAEDDKLRRLVEQYGHQNWNFIAEHFESRSG 62
           SSSSGGS GG           SCYRGHWRPAED+KLR+LVEQ+G QNWN+IAEHFE RSG
Sbjct: 6   SSSSGGSSGGVGGGGCGNSSVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSG 65

Query: 63  KSCRLRWYNQLDPSINKDPFTEEEEERLLMYQQLHGNKWALIARHFKGRTDNAVKNHFHV 122
           KSCRLRWYNQLDP+INK+PFTEEEEERLLM+QQLHGNKWALIARHFKGRTDNAVKNH+HV
Sbjct: 66  KSCRLRWYNQLDPNINKNPFTEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHV 125

Query: 123 IMARRRRERFTIFSNNNNLNNKQQRLLRTLIPSKNNFPNHLHHHNVVKWTPLAA------ 182
           IMARRRRERFTIF+N+NN  N   R   +L+P      +       VKWTPL A      
Sbjct: 126 IMARRRRERFTIFTNHNN--NNILRTRHSLLPFSKVLQSS-QQKTAVKWTPLMATTVLRH 185

Query: 183 -----APPAATAPEGEE-EEKKKRVPFIDFLGMGSS 195
                AP AA     +E EE+K+RVPFIDFLGMGSS
Sbjct: 186 GGGMLAPTAAVVSGSDEREEQKRRVPFIDFLGMGSS 218

[Close]

BLAST of MC02g1285 vs. ExPASy TrEMBL
Match: A0A6J1G7J0 (transcription factor CSA-like OS=Cucurbita moschata OX=3662 GN=LOC111451467 PE=4 SV=1)

HSP 1 Score: 274 bits (700), Expect = 1.03e-90
Identity = 143/219 (65.30%), Postives = 164/219 (74.89%), Query Frame = 0


Query: 2   SSSSSGGSGGG---------SCYRGHWRPAEDDKLRRLVEQYGHQNWNFIAEHFESRSGK 61
           SSSSSGG GGG         +CYRGHWRPAED+KLR+LVEQ+G QNWN+IAEHFE+RSGK
Sbjct: 9   SSSSSGGGGGGGCGSGSSGVTCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEARSGK 68

Query: 62  SCRLRWYNQLDPSINKDPFTEEEEERLLMYQQLHGNKWALIARHFKGRTDNAVKNHFHVI 121
           SCRLRWYNQLDP+INK+PFTEEEEERLL++Q+LHGNKWALIARHFKGRTDNAVKNH+HVI
Sbjct: 69  SCRLRWYNQLDPNINKNPFTEEEEERLLIFQRLHGNKWALIARHFKGRTDNAVKNHYHVI 128

Query: 122 MARRRRERFTIFSNNNNLNNKQQRLLRTLIPSKNNFPNHLHHHNVVKWTPLAAAP----- 181
           MARRRRERFTIF+NNNN+   +  LL     S +N     H     KW+PL A P     
Sbjct: 129 MARRRRERFTIFTNNNNILRSRHCLL-----SFSNVLQSSHQKMTPKWSPLTAGPMLENG 188

Query: 182 ------PAATAPEGEEEE-----KKKRVPFIDFLGMGSS 195
                   A++  GE EE     KK+R+PFIDFLGMGSS
Sbjct: 189 RGKSVAAVASSGSGEREEEMKGEKKRRIPFIDFLGMGSS 222

[Close]

BLAST of MC02g1285 vs. ExPASy TrEMBL
Match: A0A1S3CEN7 (transcriptional activator Myb OS=Cucumis melo OX=3656 GN=LOC103499632 PE=4 SV=1)

HSP 1 Score: 272 bits (695), Expect = 3.82e-90
Identity = 141/216 (65.28%), Postives = 158/216 (73.15%), Query Frame = 0


Query: 1   RSSSSSGGSGGG-------SCYRGHWRPAEDDKLRRLVEQYGHQNWNFIAEHFESRSGKS 60
           RSSSSSGGS GG       SCYRGHWRPAED+KLR+LVEQ+G QNWN+IAEHFE RSGKS
Sbjct: 4   RSSSSSGGSSGGGGGSSGVSCYRGHWRPAEDNKLRQLVEQFGPQNWNYIAEHFEGRSGKS 63

Query: 61  CRLRWYNQLDPSINKDPFTEEEEERLLMYQQLHGNKWALIARHFKGRTDNAVKNHFHVIM 120
           CRLRWYNQLDP+INK+PF+EEEEERLLM+QQLHGNKWALIARHFKGRTDNAVKNH+HVIM
Sbjct: 64  CRLRWYNQLDPNINKNPFSEEEEERLLMFQQLHGNKWALIARHFKGRTDNAVKNHYHVIM 123

Query: 121 ARRRRERFTIFSNNNNLNNKQQRLLRTLIPSKNNFPNHLHHHNVVKWTPLAAAPPA---- 180
           ARRRRERFTIF+N+N  NN  +  L +                 VKWTPL A  P     
Sbjct: 124 ARRRRERFTIFTNHNKNNNTIRHSLLSFSKMT----------TAVKWTPLTAGAPVLLGN 183

Query: 181 ----------ATAPEGEEEEKKKRVPFIDFLGMGSS 195
                       +  GE E+ K+R+PFIDFLGMGSS
Sbjct: 184 GRGKSSLTAVVASGSGEGEDHKRRIPFIDFLGMGSS 209

[Close]

BLAST of MC02g1285 vs. TAIR 10
Match: AT4G33450.1 (myb domain protein 69 )

HSP 1 Score: 185.3 bits (469), Expect = 4.8e-47
Identity = 84/110 (76.36%), Postives = 93/110 (84.55%), Query Frame = 0


Query: 13  SCYRGHWRPAEDDKLRRLVEQYGHQNWNFIAEHFESRSGKSCRLRWYNQLDPSINKDPFT 72
           SC RGHWRP EDD LR+LVEQYG +NWNFIA+H   RSGKSCRLRWYNQLDP+I K PFT
Sbjct: 16  SCQRGHWRPVEDDNLRQLVEQYGPKNWNFIAQHLYGRSGKSCRLRWYNQLDPNITKKPFT 75

Query: 73  EEEEERLLMYQQLHGNKWALIARHFKGRTDNAVKNHFHVIMARRRRERFT 123
           EEEEERLL   ++ GN+WA IAR F GRTDNAVKNHFHVIMARR+RE F+
Sbjct: 76  EEEEERLLKAHRIQGNRWASIARLFPGRTDNAVKNHFHVIMARRKRENFS 125

[Close]

BLAST of MC02g1285 vs. TAIR 10
Match: AT1G17950.1 (myb domain protein 52 )

HSP 1 Score: 176.8 bits (447), Expect = 1.7e-44
Identity = 98/198 (49.49%), Postives = 124/198 (62.63%), Query Frame = 0


Query: 14  CYRGHWRPAEDDKLRRLVEQYGHQNWNFIAEHFESRSGKSCRLRWYNQLDPSINKDPFTE 73
           C RGHWRPAED+KLR LVEQ+G  NWN IA+    RSGKSCRLRW+NQLDP IN++PFTE
Sbjct: 3   CSRGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSGKSCRLRWFNQLDPRINRNPFTE 62

Query: 74  EEEERLLMYQQLHGNKWALIARHFKGRTDNAVKNHFHVIMARRRRER------------- 133
           EEEERLL   ++HGN+W++IAR F GRTDNAVKNH+HVIMARR RER             
Sbjct: 63  EEEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERSKLRPRGLGHDGT 122

Query: 134 --FTIFSNNNNLNNKQQRLLRTLIPSKNNFP---NHLHHHNVVK---WTPLAAAPPAATA 191
              T    N    +K++RL  T   +  NFP   +H++H  V+K      +         
Sbjct: 123 VAATGMIGNYKDCDKERRLATT---TAINFPYQFSHINHFQVLKEFLTGKIGFRNSTTPI 182

[Close]

BLAST of MC02g1285 vs. TAIR 10
Match: AT1G73410.1 (myb domain protein 54 )

HSP 1 Score: 171.0 bits (432), Expect = 9.3e-43
Identity = 77/106 (72.64%), Postives = 89/106 (83.96%), Query Frame = 0


Query: 14  CYRGHWRPAEDDKLRRLVEQYGHQNWNFIAEHFESRSGKSCRLRWYNQLDPSINKDPFTE 73
           C RGHWRPAED+KL+ LVEQYG  NWN IA     RSGKSCRLRW+NQLDP IN++PFTE
Sbjct: 4   CSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFTE 63

Query: 74  EEEERLLMYQQLHGNKWALIARHFKGRTDNAVKNHFHVIMARRRRE 120
           EEEERLL   ++HGN+W++IAR F GRTDNAVKNH+HVIMARR R+
Sbjct: 64  EEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQ 109

[Close]

BLAST of MC02g1285 vs. TAIR 10
Match: AT1G69560.1 (myb domain protein 105 )

HSP 1 Score: 163.7 bits (413), Expect = 1.5e-40
Identity = 79/126 (62.70%), Postives = 94/126 (74.60%), Query Frame = 0


Query: 5   SSGGSGGGSCYRGHWRPAEDDKLRRLVEQYGHQNWNFIAEHFESRSGKSCRLRWYNQLDP 64
           S G S   S  RGHWRPAED KL+ LV  YG QNWN IAE  + RSGKSCRLRW+NQLDP
Sbjct: 96  SCGHSSKASVSRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDP 155

Query: 65  SINKDPFTEEEEERLLMYQQLHGNKWALIARHFKGRTDNAVKNHFHVIMARRRRERFTIF 124
            IN+  FTEEEEERL+   +L+GNKWA+IAR F GRTDN+VKNH+HVIMAR+ RE+ + +
Sbjct: 156 RINRRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFREQSSSY 215

Query: 125 SNNNNL 131
                +
Sbjct: 216 RRRKTM 221

[Close]

BLAST of MC02g1285 vs. TAIR 10
Match: AT5G17800.1 (myb domain protein 56 )

HSP 1 Score: 163.7 bits (413), Expect = 1.5e-40
Identity = 76/106 (71.70%), Postives = 84/106 (79.25%), Query Frame = 0


Query: 14  CYRGHWRPAEDDKLRRLVEQYGHQNWNFIAEHFESRSGKSCRLRWYNQLDPSINKDPFTE 73
           C RGHWRP ED KL+ LV Q+G QNWN I+ H   RSGKSCRLRW+NQLDP INK  FTE
Sbjct: 91  CSRGHWRPTEDAKLKELVAQFGPQNWNLISNHLLGRSGKSCRLRWFNQLDPRINKRAFTE 150

Query: 74  EEEERLLMYQQLHGNKWALIARHFKGRTDNAVKNHFHVIMARRRRE 120
           EEE RLL   + +GNKWALI+R F GRTDNAVKNH+HVIMARR RE
Sbjct: 151 EEEFRLLAAHRAYGNKWALISRLFPGRTDNAVKNHWHVIMARRTRE 196

The following BLAST results are available for this feature:

BLAST of MC02g1285 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6R0C4	2.4e-43	49.49	Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1	[more]
Q9FX36	1.3e-41	72.64	Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1	[more]
Q5NBM8	5.0e-41	56.69	Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV...	[more]
Q9SEZ4	2.1e-39	62.70	Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1	[more]
Q6R053	2.1e-39	71.70	Transcription factor MYB56 OS=Arabidopsis thaliana OX=3702 GN=MYB56 PE=1 SV=1	[more]

BLAST of MC02g1285 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156671.1	2.51e-143	100.00	transcription factor MYB52 [Momordica charantia]	[more]
XP_038902736.1	5.84e-92	65.28	transcription factor MYB52-like [Benincasa hispida] >XP_038902737.1 transcriptio...	[more]
KAG6571346.1	2.35e-91	68.06	Transcription factor MYB52, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022971627.1	1.31e-90	67.13	transcription factor CSA-like [Cucurbita maxima]	[more]
XP_023512391.1	1.35e-90	66.36	transcription factor CSA-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MC02g1285 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DVM9	1.21e-143	100.00	transcription factor MYB52 OS=Momordica charantia OX=3673 GN=LOC111023523 PE=4 S...	[more]
A0A6J1I2H4	6.33e-91	67.13	transcription factor CSA-like OS=Cucurbita maxima OX=3661 GN=LOC111470309 PE=4 S...	[more]
A0A6J1EVU5	8.99e-91	67.59	transcription factor CSA-like OS=Cucurbita moschata OX=3662 GN=LOC111438332 PE=4...	[more]
A0A6J1G7J0	1.03e-90	65.30	transcription factor CSA-like OS=Cucurbita moschata OX=3662 GN=LOC111451467 PE=4...	[more]
A0A1S3CEN7	3.82e-90	65.28	transcriptional activator Myb OS=Cucumis melo OX=3656 GN=LOC103499632 PE=4 SV=1	[more]

BLAST of MC02g1285 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33450.1	4.8e-47	76.36	myb domain protein 69	[more]
AT1G17950.1	1.7e-44	49.49	myb domain protein 52	[more]
AT1G73410.1	9.3e-43	72.64	myb domain protein 54	[more]
AT1G69560.1	1.5e-40	62.70	myb domain protein 105	[more]
AT5G17800.1	1.5e-40	71.70	myb domain protein 56	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 15..64 e-value: 6.2E-15 score: 65.6 coord: 67..115 e-value: 7.1E-14 score: 62.1
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 63..113 score: 8.606196
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 16..62 score: 10.975126
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 70..110 e-value: 4.24716E-9 score: 48.3406
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 19..60 e-value: 1.69383E-12 score: 57.5854
None	No IPR available	GENE3D	1.10.10.60		coord: 15..67 e-value: 1.9E-23 score: 84.2
None	No IPR available	GENE3D	1.10.10.60		coord: 69..141 e-value: 1.2E-16 score: 62.5
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 19..79 e-value: 6.2E-19 score: 68.0
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 5..133
None	No IPR available	PANTHER	PTHR45614:SF100	MYB TRANSCRIPTION FACTOR	coord: 5..133
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 16..62 score: 17.529289
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 63..117 score: 22.765993
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 15..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g1285.1	MC02g1285.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding