MC02g1270 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g1270
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	ATP synthase gamma chain like
Location	MC02: 11908742 .. 11909047 (+)
RNA-Seq Expression	MC02g1270
Synteny	MC02g1270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAACTCCGAAAAAGGAAGAAGATGAGGTAACTACTCCTGCCACTTCCTCTGGGTTTATGGGTAAATTGGAACAGAAGTACAGGGAAATCAAAGAGAATGCAGAAACATATCCTTATGTGTGGGGCTCATACATTGTTGTCTATGGTGGTTTTGCTCTTTGGACTGGCTATAGATGGAGGAAGCTGCGCAAGACCGAGGACAGAGTACGTGCGCTACAAGAGAAGCTCCGTCGGCGTTACGAAGCCGAACAATCGGCCAGTTCGGTCGCATCAGTAGAGAAAGATCCACCATCTGTAAAACAG

mRNA sequence

ATGGAAACTCCGAAAAAGGAAGAAGATGAGGTAACTACTCCTGCCACTTCCTCTGGGTTTATGGGTAAATTGGAACAGAAGTACAGGGAAATCAAAGAGAATGCAGAAACATATCCTTATGTGTGGGGCTCATACATTGTTGTCTATGGTGGTTTTGCTCTTTGGACTGGCTATAGATGGAGGAAGCTGCGCAAGACCGAGGACAGAGTACGTGCGCTACAAGAGAAGCTCCGTCGGCGTTACGAAGCCGAACAATCGGCCAGTTCGGTCGCATCAGTAGAGAAAGATCCACCATCTGTAAAACAG

Coding sequence (CDS)

ATGGAAACTCCGAAAAAGGAAGAAGATGAGGTAACTACTCCTGCCACTTCCTCTGGGTTTATGGGTAAATTGGAACAGAAGTACAGGGAAATCAAAGAGAATGCAGAAACATATCCTTATGTGTGGGGCTCATACATTGTTGTCTATGGTGGTTTTGCTCTTTGGACTGGCTATAGATGGAGGAAGCTGCGCAAGACCGAGGACAGAGTACGTGCGCTACAAGAGAAGCTCCGTCGGCGTTACGAAGCCGAACAATCGGCCAGTTCGGTCGCATCAGTAGAGAAAGATCCACCATCTGTAAAACAG

Protein sequence

METPKKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKTEDRVRALQEKLRRRYEAEQSASSVASVEKDPPSVKQ

Homology

[Close]

BLAST of MC02g1270 vs. NCBI nr
Match: XP_022148881.1 (uncharacterized protein LOC111017444 [Momordica charantia])

HSP 1 Score: 199 bits (506), Expect = 3.94e-64
Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 1   METPKKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW 60
           METPKKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW
Sbjct: 1   METPKKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW 60

Query: 61  RKLRKTEDRVRALQEKLRRRYEAEQSASSVASVEKDPPSVKQ 102
           RKLRKTEDRVR LQEKLRRRYEAEQSASSVASVEKDPPSVKQ
Sbjct: 61  RKLRKTEDRVRXLQEKLRRRYEAEQSASSVASVEKDPPSVKQ 102

[Close]

BLAST of MC02g1270 vs. NCBI nr
Match: XP_022948157.1 (uncharacterized protein LOC111451821 [Cucurbita moschata] >XP_022948158.1 uncharacterized protein LOC111451821 [Cucurbita moschata] >XP_022948159.1 uncharacterized protein LOC111451821 [Cucurbita moschata] >XP_023534704.1 uncharacterized protein LOC111796195 [Cucurbita pepo subsp. pepo] >XP_023534706.1 uncharacterized protein LOC111796195 [Cucurbita pepo subsp. pepo] >KAG7035292.1 hypothetical protein SDJN02_02087 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 169 bits (428), Expect = 3.52e-52
Identity = 88/106 (83.02%), Postives = 96/106 (90.57%), Query Frame = 0


Query: 1   METPKKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW 60
           MET KKEED +T PA+SSGF+GKLE+KY+E+KENAETYPYVWGSYIVVYGGFALWTGYRW
Sbjct: 1   METQKKEEDNLTAPASSSGFLGKLEEKYKELKENAETYPYVWGSYIVVYGGFALWTGYRW 60

Query: 61  RKLRKTEDRVRALQEKLRRRYEAEQSA----SSVASVEKDPPSVKQ 102
           RKLRKTEDRVRALQEKLR+RYEAEQSA    +SVASVEK   SVKQ
Sbjct: 61  RKLRKTEDRVRALQEKLRQRYEAEQSAKQSANSVASVEKVSQSVKQ 106

[Close]

BLAST of MC02g1270 vs. NCBI nr
Match: KAG6605336.1 (hypothetical protein SDJN03_02653, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 169 bits (428), Expect = 1.13e-51
Identity = 88/106 (83.02%), Postives = 96/106 (90.57%), Query Frame = 0


Query: 1   METPKKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW 60
           MET KKEED +T PA+SSGF+GKLE+KY+E+KENAETYPYVWGSYIVVYGGFALWTGYRW
Sbjct: 1   METQKKEEDNLTAPASSSGFLGKLEEKYKELKENAETYPYVWGSYIVVYGGFALWTGYRW 60

Query: 61  RKLRKTEDRVRALQEKLRRRYEAEQSA----SSVASVEKDPPSVKQ 102
           RKLRKTEDRVRALQEKLR+RYEAEQSA    +SVASVEK   SVKQ
Sbjct: 61  RKLRKTEDRVRALQEKLRQRYEAEQSAKQSANSVASVEKVSQSVKQ 106

[Close]

BLAST of MC02g1270 vs. NCBI nr
Match: XP_023007268.1 (uncharacterized protein LOC111499806 [Cucurbita maxima])

HSP 1 Score: 166 bits (419), Expect = 8.30e-51
Identity = 86/106 (81.13%), Postives = 94/106 (88.68%), Query Frame = 0


Query: 1   METPKKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW 60
           ME  KKEED +T PA+SSGF+GKLE+KY+E+KENAETYPYVWGSYIVVYGGFALWTGYRW
Sbjct: 1   MEAQKKEEDNLTAPASSSGFLGKLEEKYKELKENAETYPYVWGSYIVVYGGFALWTGYRW 60

Query: 61  RKLRKTEDRVRALQEKLRRRYEAEQSA----SSVASVEKDPPSVKQ 102
           RKLRKTEDRVR LQEKLR+RYEAEQSA    +SVASVEK   SVKQ
Sbjct: 61  RKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASVEKVSQSVKQ 106

[Close]

BLAST of MC02g1270 vs. NCBI nr
Match: XP_038900834.1 (uncharacterized protein LOC120087898 [Benincasa hispida])

HSP 1 Score: 150 bits (379), Expect = 8.89e-45
Identity = 78/100 (78.00%), Postives = 88/100 (88.00%), Query Frame = 0


Query: 5   KKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLR 64
           +KEED++   A+S GF+GKLE+KYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLR
Sbjct: 7   EKEEDKLYGVASSIGFLGKLEEKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLR 66

Query: 65  KTEDRVRALQEKLRRRYEAEQSAS--SVASVEKDPPSVKQ 102
           KTEDRVR LQEKLR+RYEAEQS++  S  SV K+P S KQ
Sbjct: 67  KTEDRVRVLQEKLRQRYEAEQSSAKQSANSVHKNPSSSKQ 106

[Close]

BLAST of MC02g1270 vs. ExPASy TrEMBL
Match: A0A6J1D6P5 (uncharacterized protein LOC111017444 OS=Momordica charantia OX=3673 GN=LOC111017444 PE=4 SV=1)

HSP 1 Score: 199 bits (506), Expect = 1.91e-64
Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 1   METPKKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW 60
           METPKKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW
Sbjct: 1   METPKKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW 60

Query: 61  RKLRKTEDRVRALQEKLRRRYEAEQSASSVASVEKDPPSVKQ 102
           RKLRKTEDRVR LQEKLRRRYEAEQSASSVASVEKDPPSVKQ
Sbjct: 61  RKLRKTEDRVRXLQEKLRRRYEAEQSASSVASVEKDPPSVKQ 102

[Close]

BLAST of MC02g1270 vs. ExPASy TrEMBL
Match: A0A6J1G8F0 (uncharacterized protein LOC111451821 OS=Cucurbita moschata OX=3662 GN=LOC111451821 PE=4 SV=1)

HSP 1 Score: 169 bits (428), Expect = 1.71e-52
Identity = 88/106 (83.02%), Postives = 96/106 (90.57%), Query Frame = 0


Query: 1   METPKKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW 60
           MET KKEED +T PA+SSGF+GKLE+KY+E+KENAETYPYVWGSYIVVYGGFALWTGYRW
Sbjct: 1   METQKKEEDNLTAPASSSGFLGKLEEKYKELKENAETYPYVWGSYIVVYGGFALWTGYRW 60

Query: 61  RKLRKTEDRVRALQEKLRRRYEAEQSA----SSVASVEKDPPSVKQ 102
           RKLRKTEDRVRALQEKLR+RYEAEQSA    +SVASVEK   SVKQ
Sbjct: 61  RKLRKTEDRVRALQEKLRQRYEAEQSAKQSANSVASVEKVSQSVKQ 106

[Close]

BLAST of MC02g1270 vs. ExPASy TrEMBL
Match: A0A6J1L783 (uncharacterized protein LOC111499806 OS=Cucurbita maxima OX=3661 GN=LOC111499806 PE=4 SV=1)

HSP 1 Score: 166 bits (419), Expect = 4.02e-51
Identity = 86/106 (81.13%), Postives = 94/106 (88.68%), Query Frame = 0


Query: 1   METPKKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRW 60
           ME  KKEED +T PA+SSGF+GKLE+KY+E+KENAETYPYVWGSYIVVYGGFALWTGYRW
Sbjct: 1   MEAQKKEEDNLTAPASSSGFLGKLEEKYKELKENAETYPYVWGSYIVVYGGFALWTGYRW 60

Query: 61  RKLRKTEDRVRALQEKLRRRYEAEQSA----SSVASVEKDPPSVKQ 102
           RKLRKTEDRVR LQEKLR+RYEAEQSA    +SVASVEK   SVKQ
Sbjct: 61  RKLRKTEDRVRVLQEKLRQRYEAEQSAKQSANSVASVEKVSQSVKQ 106

[Close]

BLAST of MC02g1270 vs. ExPASy TrEMBL
Match: A0A5C7ILW6 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004401 PE=4 SV=1)

HSP 1 Score: 137 bits (346), Expect = 5.86e-40
Identity = 66/95 (69.47%), Postives = 82/95 (86.32%), Query Frame = 0


Query: 5   KKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLR 64
           K E+D++TT + ++GF+G ++++YR+ KENAETYPYVW SYIVVYGGFALWT YRWRKLR
Sbjct: 6   KGEDDQLTTSSQAAGFLGMIQEQYRKTKENAETYPYVWASYIVVYGGFALWTTYRWRKLR 65

Query: 65  KTEDRVRALQEKLRRRYEAEQSASSVASVEKDPPS 99
           KTEDRVR LQE+LR+  E+EQSASS  SV+K PPS
Sbjct: 66  KTEDRVRGLQERLRKLVESEQSASSTGSVQKVPPS 100

[Close]

BLAST of MC02g1270 vs. ExPASy TrEMBL
Match: A0A7N2MRZ8 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 130 bits (328), Expect = 2.54e-37
Identity = 64/94 (68.09%), Postives = 76/94 (80.85%), Query Frame = 0


Query: 5  KKEEDEVTTPATSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLR 64
          K E+D+     T+ G  G +E++YR+IKENAETYPYVWGSYIVVYGGFALW  YRWRKLR
Sbjct: 6  KGEDDQQVASTTAVGLRGMVEEQYRKIKENAETYPYVWGSYIVVYGGFALWGAYRWRKLR 65

Query: 65 KTEDRVRALQEKLRRRYEAEQSASSVASVEKDPP 98
          +TEDRVR LQE+LR+  E E+SAS+V SVEK PP
Sbjct: 66 RTEDRVRVLQERLRKLVETEESASTVKSVEKAPP 99

[Close]

BLAST of MC02g1270 vs. TAIR 10
Match: AT5G09270.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 104.8 bits (260), Expect = 4.3e-23
Identity = 52/93 (55.91%), Postives = 70/93 (75.27%), Query Frame = 0


Query: 8   EDEVTTPA-TSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKT 67
           ED+ + P+  + GF+G +E++Y++++++AE YPYVWGSY VVYGG  LWT YRWRKLR+T
Sbjct: 9   EDQESQPSQVAPGFVGAIEEQYKKLRDHAEAYPYVWGSYTVVYGGLFLWTAYRWRKLRRT 68

Query: 68  EDRVRALQEKLRRRYEAEQSA----SSVASVEK 96
           EDRVR LQ KLR+  E EQ+A     S  SV+K
Sbjct: 69  EDRVRGLQTKLRKLVENEQAAVTASKSAQSVDK 101

[Close]

BLAST of MC02g1270 vs. TAIR 10
Match: AT5G09270.2 (unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 104.8 bits (260), Expect = 4.3e-23
Identity = 52/93 (55.91%), Postives = 70/93 (75.27%), Query Frame = 0


Query: 8   EDEVTTPA-TSSGFMGKLEQKYREIKENAETYPYVWGSYIVVYGGFALWTGYRWRKLRKT 67
           ED+ + P+  + GF+G +E++Y++++++AE YPYVWGSY VVYGG  LWT YRWRKLR+T
Sbjct: 9   EDQESQPSQVAPGFVGAIEEQYKKLRDHAEAYPYVWGSYTVVYGGLFLWTAYRWRKLRRT 68

Query: 68  EDRVRALQEKLRRRYEAEQSA----SSVASVEK 96
           EDRVR LQ KLR+  E EQ+A     S  SV+K
Sbjct: 69  EDRVRGLQTKLRKLVENEQAAVTASKSAQSVDK 101

The following BLAST results are available for this feature:

BLAST of MC02g1270 vs.


Match Name	E-value	Identity	Description

BLAST of MC02g1270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148881.1	3.94e-64	99.02	uncharacterized protein LOC111017444 [Momordica charantia]	[more]
XP_022948157.1	3.52e-52	83.02	uncharacterized protein LOC111451821 [Cucurbita moschata] >XP_022948158.1 unchar...	[more]
KAG6605336.1	1.13e-51	83.02	hypothetical protein SDJN03_02653, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023007268.1	8.30e-51	81.13	uncharacterized protein LOC111499806 [Cucurbita maxima]	[more]
XP_038900834.1	8.89e-45	78.00	uncharacterized protein LOC120087898 [Benincasa hispida]	[more]

BLAST of MC02g1270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D6P5	1.91e-64	99.02	uncharacterized protein LOC111017444 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1G8F0	1.71e-52	83.02	uncharacterized protein LOC111451821 OS=Cucurbita moschata OX=3662 GN=LOC1114518...	[more]
A0A6J1L783	4.02e-51	81.13	uncharacterized protein LOC111499806 OS=Cucurbita maxima OX=3661 GN=LOC111499806...	[more]
A0A5C7ILW6	5.86e-40	69.47	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_004401 PE=4 SV=1	[more]
A0A7N2MRZ8	2.54e-37	68.09	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of MC02g1270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G09270.1	4.3e-23	55.91	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT5G09270.2	4.3e-23	55.91	unknown protein; Has 25 Blast hits to 25 proteins in 9 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 63..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..102
None	No IPR available	PANTHER	PTHR36794	TRANSMEMBRANE PROTEIN	coord: 5..101
None	No IPR available	PANTHER	PTHR36794:SF1	TRANSMEMBRANE PROTEIN	coord: 5..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g1270.1	MC02g1270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane