MC02g1254 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g1254
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC02: 11605916 .. 11606083 (-)
RNA-Seq Expression	MC02g1254
Synteny	MC02g1254

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAATAGATGGCGAGTGCCTAATCGAATTGATCGGGTCATGTAGGAACAAGGTTCAAGTCTACCGGTCTGTTAGGATGCCTCAGCTGCATACATCACTGCACTTCCACTTGACACCTATCGTGATGATAAACGGCTCATCTCGCCGTGACCTTCTCTTGAATTCT

mRNA sequence

ATGAAAATAGATGGCGAGTGCCTAATCGAATTGATCGGGTCATGTAGGAACAAGGTTCAAGTCTACCGGTCTGTTAGGATGCCTCAGCTGCATACATCACTGCACTTCCACTTGACACCTATCGTGATGATAAACGGCTCATCTCGCCGTGACCTTCTCTTGAATTCT

Coding sequence (CDS)

ATGAAAATAGATGGCGAGTGCCTAATCGAATTGATCGGGTCATGTAGGAACAAGGTTCAAGTCTACCGGTCTGTTAGGATGCCTCAGCTGCATACATCACTGCACTTCCACTTGACACCTATCGTGATGATAAACGGCTCATCTCGCCGTGACCTTCTCTTGAATTCT

Protein sequence

MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS

Homology

[Close]

BLAST of MC02g1254 vs. NCBI nr
Match: CAB4289460.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 117 bits (292), Expect = 1.55e-32
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0


Query: 1  MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS 56
          MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS
Sbjct: 1  MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS 56

[Close]

BLAST of MC02g1254 vs. NCBI nr
Match: KAB2004069.1 (hypothetical protein ES319_D11G172700v1, partial [Gossypium barbadense] >KAG4120778.1 hypothetical protein ERO13_D11G164850v2, partial [Gossypium hirsutum])

HSP 1 Score: 117 bits (292), Expect = 1.55e-32
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0


Query: 1  MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS 56
          MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS
Sbjct: 1  MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS 56

[Close]

BLAST of MC02g1254 vs. NCBI nr
Match: OMP12450.1 (hypothetical protein COLO4_03191 [Corchorus olitorius])

HSP 1 Score: 117 bits (292), Expect = 1.79e-32
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0


Query: 1  MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS 56
          MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS
Sbjct: 1  MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS 56

[Close]

BLAST of MC02g1254 vs. NCBI nr
Match: TYG45540.1 (hypothetical protein ES288_D11G182600v1 [Gossypium darwinii] >TYH44228.1 hypothetical protein ES332_D11G179700v1 [Gossypium tomentosum])

HSP 1 Score: 117 bits (292), Expect = 2.07e-32
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0


Query: 1  MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS 56
          MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS
Sbjct: 1  MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS 56

[Close]

BLAST of MC02g1254 vs. NCBI nr
Match: TYH88805.1 (hypothetical protein ES332_D01G213900v1 [Gossypium tomentosum])

HSP 1 Score: 117 bits (292), Expect = 3.22e-32
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0


Query: 1  MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS 56
          MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS
Sbjct: 1  MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS 56

[Close]

BLAST of MC02g1254 vs. ExPASy TrEMBL
Match: A0A6J5VK34 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS48194 PE=4 SV=1)

HSP 1 Score: 117 bits (292), Expect = 7.48e-33
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0


Query: 1  MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS 56
          MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS
Sbjct: 1  MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS 56

[Close]

BLAST of MC02g1254 vs. ExPASy TrEMBL
Match: A0A5J5PC21 (Uncharacterized protein (Fragment) OS=Gossypium barbadense OX=3634 GN=ES319_D11G172700v1 PE=4 SV=1)

HSP 1 Score: 117 bits (292), Expect = 7.48e-33
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0


Query: 1  MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS 56
          MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS
Sbjct: 1  MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS 56

[Close]

BLAST of MC02g1254 vs. ExPASy TrEMBL
Match: A0A1R3KZG7 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_03191 PE=4 SV=1)

HSP 1 Score: 117 bits (292), Expect = 8.65e-33
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0


Query: 1  MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS 56
          MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS
Sbjct: 1  MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS 56

[Close]

BLAST of MC02g1254 vs. ExPASy TrEMBL
Match: A0A5D2IP15 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D11G179700v1 PE=4 SV=1)

HSP 1 Score: 117 bits (292), Expect = 1.00e-32
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0


Query: 1  MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS 56
          MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS
Sbjct: 1  MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS 56

[Close]

BLAST of MC02g1254 vs. ExPASy TrEMBL
Match: A0A5D2AMF5 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D11G182600v1 PE=4 SV=1)

HSP 1 Score: 117 bits (292), Expect = 1.00e-32
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0


Query: 1  MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS 56
          MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS
Sbjct: 1  MKIDGECLIELIGSCRNKVQVYRSVRMPQLHTSLHFHLTPIVMINGSSRRDLLLNS 56

The following BLAST results are available for this feature:

BLAST of MC02g1254 vs.


Match Name	E-value	Identity	Description

BLAST of MC02g1254 vs. NCBI nr


Match Name	E-value	Identity	Description
CAB4289460.1	1.55e-32	100.00	unnamed protein product [Prunus armeniaca]	[more]
KAB2004069.1	1.55e-32	100.00	hypothetical protein ES319_D11G172700v1, partial [Gossypium barbadense] >KAG4120...	[more]
OMP12450.1	1.79e-32	100.00	hypothetical protein COLO4_03191 [Corchorus olitorius]	[more]
TYG45540.1	2.07e-32	100.00	hypothetical protein ES288_D11G182600v1 [Gossypium darwinii] >TYH44228.1 hypothe...	[more]
TYH88805.1	3.22e-32	100.00	hypothetical protein ES332_D01G213900v1 [Gossypium tomentosum]	[more]

BLAST of MC02g1254 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J5VK34	7.48e-33	100.00	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS48194 PE=4 S...	[more]
A0A5J5PC21	7.48e-33	100.00	Uncharacterized protein (Fragment) OS=Gossypium barbadense OX=3634 GN=ES319_D11G...	[more]
A0A1R3KZG7	8.65e-33	100.00	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_03191 PE=4 SV=1	[more]
A0A5D2IP15	1.00e-32	100.00	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D11G179700v1 P...	[more]
A0A5D2AMF5	1.00e-32	100.00	Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D11G182600v1 PE=...	[more]

BLAST of MC02g1254 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g1254.1	MC02g1254.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane