MC02g1175 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g1175
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-related
Location	MC02: 10316384 .. 10316461 (-)
RNA-Seq Expression	MC02g1175
Synteny	MC02g1175

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCACGTATCAGATATTAAACTGATAAGAACAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAAAGGTATG

mRNA sequence

ATGGCCCACGTATCAGATATTAAACTGATAAGAACAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAAAGGTATG

Coding sequence (CDS)

ATGGCCCACGTATCAGATATTAAACTGATAAGAACAGATACTACACTTGATCTTAGCCAAAAGGCCGAGAAAGGTATG

Protein sequence

MAHVSDIKLIRTDTTLDLSQKAEKGM

Homology

[Close]

BLAST of MC02g1175 vs. ExPASy Swiss-Prot
Match: F4J3H7 (Serine/threonine-protein kinase ZRK7 OS=Arabidopsis thaliana OX=3702 GN=ZRK7 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.3e-07
Identity = 25/26 (96.15%), Postives = 26/26 (100.00%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGM 27
          MAH+SDIKLIRTDTTLDLSQKAEKGM
Sbjct: 1  MAHISDIKLIRTDTTLDLSQKAEKGM 26

[Close]

BLAST of MC02g1175 vs. NCBI nr
Match: CAA2622373.1 (unnamed protein product [Spirodela intermedia])

HSP 1 Score: 53.9 bits (128), Expect = 1.00e-08
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGM 26
          MAHVSDIKLIRTDTTLDLSQKAEKGM
Sbjct: 1  MAHVSDIKLIRTDTTLDLSQKAEKGM 26

[Close]

BLAST of MC02g1175 vs. NCBI nr
Match: KAG4176346.1 (hypothetical protein ERO13_A11G239260v2 [Gossypium hirsutum])

HSP 1 Score: 53.9 bits (128), Expect = 1.03e-08
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGM 26
          MAHVSDIKLIRTDTTLDLSQKAEKGM
Sbjct: 1  MAHVSDIKLIRTDTTLDLSQKAEKGM 26

[Close]

BLAST of MC02g1175 vs. NCBI nr
Match: KAB2058752.1 (hypothetical protein ES319_A11G255700v1 [Gossypium barbadense])

HSP 1 Score: 53.9 bits (128), Expect = 1.03e-08
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGM 26
          MAHVSDIKLIRTDTTLDLSQKAEKGM
Sbjct: 1  MAHVSDIKLIRTDTTLDLSQKAEKGM 26

[Close]

BLAST of MC02g1175 vs. NCBI nr
Match: CAA2622388.1 (unnamed protein product [Spirodela intermedia] >CAA7398407.1 unnamed protein product [Spirodela intermedia] >CAA7398422.1 unnamed protein product [Spirodela intermedia])

HSP 1 Score: 53.9 bits (128), Expect = 1.13e-08
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGM 26
          MAHVSDIKLIRTDTTLDLSQKAEKGM
Sbjct: 1  MAHVSDIKLIRTDTTLDLSQKAEKGM 26

[Close]

BLAST of MC02g1175 vs. NCBI nr
Match: PUZ38402.1 (hypothetical protein GQ55_9G193500 [Panicum hallii var. hallii])

HSP 1 Score: 53.9 bits (128), Expect = 1.13e-08
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGM 26
          MAHVSDIKLIRTDTTLDLSQKAEKGM
Sbjct: 1  MAHVSDIKLIRTDTTLDLSQKAEKGM 26

[Close]

BLAST of MC02g1175 vs. ExPASy TrEMBL
Match: A0A7I8IVK6 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_06008420 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 4.84e-09
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGM 26
          MAHVSDIKLIRTDTTLDLSQKAEKGM
Sbjct: 1  MAHVSDIKLIRTDTTLDLSQKAEKGM 26

[Close]

BLAST of MC02g1175 vs. ExPASy TrEMBL
Match: A0A5J5TT91 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A11G255700v1 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 5.00e-09
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGM 26
          MAHVSDIKLIRTDTTLDLSQKAEKGM
Sbjct: 1  MAHVSDIKLIRTDTTLDLSQKAEKGM 26

[Close]

BLAST of MC02g1175 vs. ExPASy TrEMBL
Match: A0A7I8IW93 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_06008434 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 5.47e-09
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGM 26
          MAHVSDIKLIRTDTTLDLSQKAEKGM
Sbjct: 1  MAHVSDIKLIRTDTTLDLSQKAEKGM 26

[Close]

BLAST of MC02g1175 vs. ExPASy TrEMBL
Match: A0A2T7C4Y5 (Uncharacterized protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_9G193500 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 5.47e-09
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGM 26
          MAHVSDIKLIRTDTTLDLSQKAEKGM
Sbjct: 1  MAHVSDIKLIRTDTTLDLSQKAEKGM 26

[Close]

BLAST of MC02g1175 vs. ExPASy TrEMBL
Match: A0A7I8LBN3 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI8410_13017880 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 5.47e-09
Identity = 26/26 (100.00%), Postives = 26/26 (100.00%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGM 26
          MAHVSDIKLIRTDTTLDLSQKAEKGM
Sbjct: 1  MAHVSDIKLIRTDTTLDLSQKAEKGM 26

[Close]

BLAST of MC02g1175 vs. TAIR 10
Match: AT1G16820.1 (vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-related )

HSP 1 Score: 53.1 bits (126), Expect = 3.8e-08
Identity = 25/26 (96.15%), Postives = 26/26 (100.00%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGM 27
          MAH+SDIKLIRTDTTLDLSQKAEKGM
Sbjct: 1  MAHISDIKLIRTDTTLDLSQKAEKGM 26

[Close]

BLAST of MC02g1175 vs. TAIR 10
Match: AT3G57770.1 (Protein kinase superfamily protein )

HSP 1 Score: 53.1 bits (126), Expect = 3.8e-08
Identity = 25/26 (96.15%), Postives = 26/26 (100.00%), Query Frame = 0


Query: 1  MAHVSDIKLIRTDTTLDLSQKAEKGM 27
          MAH+SDIKLIRTDTTLDLSQKAEKGM
Sbjct: 1  MAHISDIKLIRTDTTLDLSQKAEKGM 26

The following BLAST results are available for this feature:

BLAST of MC02g1175 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4J3H7	5.3e-07	96.15	Serine/threonine-protein kinase ZRK7 OS=Arabidopsis thaliana OX=3702 GN=ZRK7 PE=...	[more]

BLAST of MC02g1175 vs. NCBI nr


Match Name	E-value	Identity	Description
CAA2622373.1	1.00e-08	100.00	unnamed protein product [Spirodela intermedia]	[more]
KAG4176346.1	1.03e-08	100.00	hypothetical protein ERO13_A11G239260v2 [Gossypium hirsutum]	[more]
KAB2058752.1	1.03e-08	100.00	hypothetical protein ES319_A11G255700v1 [Gossypium barbadense]	[more]
CAA2622388.1	1.13e-08	100.00	unnamed protein product [Spirodela intermedia] >CAA7398407.1 unnamed protein pro...	[more]
PUZ38402.1	1.13e-08	100.00	hypothetical protein GQ55_9G193500 [Panicum hallii var. hallii]	[more]

BLAST of MC02g1175 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7I8IVK6	4.84e-09	100.00	Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_06008420 PE=4 SV...	[more]
A0A5J5TT91	5.00e-09	100.00	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A11G255700v1 PE...	[more]
A0A7I8IW93	5.47e-09	100.00	Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_06008434 PE=4 SV...	[more]
A0A2T7C4Y5	5.47e-09	100.00	Uncharacterized protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_9G19350...	[more]
A0A7I8LBN3	5.47e-09	100.00	Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI8410_13017880 PE=4 SV...	[more]

BLAST of MC02g1175 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16820.1	3.8e-08	96.15	vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar pr...	[more]
AT3G57770.1	3.8e-08	96.15	Protein kinase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34892	VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT-RELATED / V-ATPASE-RELATED / VACUOLAR PROTON PUMP-LIKE PROTEIN	coord: 1..26
None	No IPR available	PANTHER	PTHR34892:SF2	VACUOLAR ATP SYNTHASE CATALYTIC SUBUNIT-RELATED / V-ATPASE-RELATED / VACUOLAR PROTON PUMP-LIKE PROTEIN	coord: 1..26

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g1175.1	MC02g1175.1	mRNA