MC02g1139 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC02g1139
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPhotosystem I P700 chlorophyll A apoprotein
LocationMC02: 9839145 .. 9839237 (-)
RNA-Seq ExpressionMC02g1139
SyntenyMC02g1139
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTATTTTTTTATTGATGGGCGAACAACGGGGATTGAACCCGCGTGTGGTGGATTCACAATCCACTGCCTTGATCCACTTGGCTACATCCGCC

mRNA sequence

TTTATTTTTTTATTGATGGGCGAACAACGGGGATTGAACCCGCGTGTGGTGGATTCACAATCCACTGCCTTGATCCACTTGGCTACATCCGCC

Coding sequence (CDS)

TTTATTTTTTTATTGATGGGCGAACAACGGGGATTGAACCCGCGTGTGGTGGATTCACAATCCACTGCCTTGATCCACTTGGCTACATCCGCC

Protein sequence

FIFLLMGEQRGLNPRVVDSQSTALIHLATSA
Homology
BLAST of MC02g1139 vs. NCBI nr
Match: KAG6585927.1 (hypothetical protein SDJN03_18660, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 58.5 bits (140), Expect = 7.87e-10
Identity = 27/30 (90.00%), Postives = 30/30 (100.00%), Query Frame = 0

Query: 2  IFLLMGEQRGLNPRVVDSQSTALIHLATSA 31
          ++LLMGE+RGLNPRVVDSQSTALIHLATSA
Sbjct: 2  VYLLMGERRGLNPRVVDSQSTALIHLATSA 31

BLAST of MC02g1139 vs. NCBI nr
Match: GER51055.1 (potassium-transporting ATPase B chain [Striga asiatica])

HSP 1 Score: 57.0 bits (136), Expect = 2.64e-08
Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 0

Query: 2  IFLLMGEQRGLNPRVVDSQSTALIHLATSA 31
          + LLMGE+RGLNPRVVDSQSTALIHLATSA
Sbjct: 53 VHLLMGERRGLNPRVVDSQSTALIHLATSA 82

BLAST of MC02g1139 vs. NCBI nr
Match: AGC78986.1 (hypothetical protein [Vicia faba])

HSP 1 Score: 54.7 bits (130), Expect = 3.53e-08
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0

Query: 5  LMGEQRGLNPRVVDSQSTALIHLATSA 31
          LMGE+RGLNPRVVDSQSTALIHLATSA
Sbjct: 37 LMGERRGLNPRVVDSQSTALIHLATSA 63

BLAST of MC02g1139 vs. NCBI nr
Match: CAD1835870.1 (unnamed protein product [Ananas comosus var. bracteatus])

HSP 1 Score: 57.0 bits (136), Expect = 4.54e-08
Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 0

Query: 2  IFLLMGEQRGLNPRVVDSQSTALIHLATSA 31
          + LLMGE+RGLNPRVVDSQSTALIHLATSA
Sbjct: 2  VHLLMGERRGLNPRVVDSQSTALIHLATSA 31

BLAST of MC02g1139 vs. NCBI nr
Match: RDY13486.1 (hypothetical protein CR513_01613, partial [Mucuna pruriens])

HSP 1 Score: 53.1 bits (126), Expect = 9.11e-08
Identity = 25/26 (96.15%), Postives = 26/26 (100.00%), Query Frame = 0

Query: 6  MGEQRGLNPRVVDSQSTALIHLATSA 31
          MGE+RGLNPRVVDSQSTALIHLATSA
Sbjct: 1  MGERRGLNPRVVDSQSTALIHLATSA 26

BLAST of MC02g1139 vs. ExPASy TrEMBL
Match: A0A5A7R065 (Potassium-transporting ATPase B chain OS=Striga asiatica OX=4170 GN=STAS_28395 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.28e-08
Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 0

Query: 2  IFLLMGEQRGLNPRVVDSQSTALIHLATSA 31
          + LLMGE+RGLNPRVVDSQSTALIHLATSA
Sbjct: 53 VHLLMGERRGLNPRVVDSQSTALIHLATSA 82

BLAST of MC02g1139 vs. ExPASy TrEMBL
Match: R4IUC3 (Uncharacterized protein OS=Vicia faba OX=3906 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.71e-08
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0

Query: 5  LMGEQRGLNPRVVDSQSTALIHLATSA 31
          LMGE+RGLNPRVVDSQSTALIHLATSA
Sbjct: 37 LMGERRGLNPRVVDSQSTALIHLATSA 63

BLAST of MC02g1139 vs. ExPASy TrEMBL
Match: A0A6V7PYN9 (Uncharacterized protein OS=Ananas comosus var. bracteatus OX=296719 GN=CB5_LOCUS19081 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.20e-08
Identity = 27/30 (90.00%), Postives = 29/30 (96.67%), Query Frame = 0

Query: 2  IFLLMGEQRGLNPRVVDSQSTALIHLATSA 31
          + LLMGE+RGLNPRVVDSQSTALIHLATSA
Sbjct: 2  VHLLMGERRGLNPRVVDSQSTALIHLATSA 31

BLAST of MC02g1139 vs. ExPASy TrEMBL
Match: A0A371IEL0 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_01613 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.41e-08
Identity = 25/26 (96.15%), Postives = 26/26 (100.00%), Query Frame = 0

Query: 6  MGEQRGLNPRVVDSQSTALIHLATSA 31
          MGE+RGLNPRVVDSQSTALIHLATSA
Sbjct: 1  MGERRGLNPRVVDSQSTALIHLATSA 26

BLAST of MC02g1139 vs. ExPASy TrEMBL
Match: A4QMH1 (ORF65d OS=Pinus koraiensis OX=88728 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.49e-07
Identity = 24/31 (77.42%), Postives = 27/31 (87.10%), Query Frame = 0

Query: 1  FIFLLMGEQRGLNPRVVDSQSTALIHLATSA 31
          F+   MGE+R LNPRVVDSQSTAL+HLATSA
Sbjct: 15 FLSSFMGERRELNPRVVDSQSTALVHLATSA 45

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6585927.17.87e-1090.00hypothetical protein SDJN03_18660, partial [Cucurbita argyrosperma subsp. sorori... [more]
GER51055.12.64e-0890.00potassium-transporting ATPase B chain [Striga asiatica][more]
AGC78986.13.53e-0896.30hypothetical protein [Vicia faba][more]
CAD1835870.14.54e-0890.00unnamed protein product [Ananas comosus var. bracteatus][more]
RDY13486.19.11e-0896.15hypothetical protein CR513_01613, partial [Mucuna pruriens][more]
Match NameE-valueIdentityDescription
A0A5A7R0651.28e-0890.00Potassium-transporting ATPase B chain OS=Striga asiatica OX=4170 GN=STAS_28395 P... [more]
R4IUC31.71e-0896.30Uncharacterized protein OS=Vicia faba OX=3906 PE=4 SV=1[more]
A0A6V7PYN92.20e-0890.00Uncharacterized protein OS=Ananas comosus var. bracteatus OX=296719 GN=CB5_LOCUS... [more]
A0A371IEL04.41e-0896.15Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_01613 P... [more]
A4QMH11.49e-0777.42ORF65d OS=Pinus koraiensis OX=88728 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC02g1139.1MC02g1139.1mRNA