MC02g1113 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC02g1113
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description60S ribosomal protein L26
LocationMC02: 9480464 .. 9481650 (-)
RNA-Seq ExpressionMC02g1113
SyntenyMC02g1113
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAGAAAATTGGAAATTATAGATTGAGGGTATTTTGGTAAATATGTGTCGAGTCCAATTTTCCAATTCCTCCAAATAAAAGGGATTAGGGTTTCTTTTTTCCGGGCCTTTCAGCATTGTTCCACAGATTCAGAGAGAGAGCGGCAAAACCCTAATCGAATCGCAATGAAGTACAACCCTAGAGTCTCCAGCTCCCGCCGCAAGAACCGCAAGGCCCACTTCACGGCGCCGTCGAGCGTCCGCCGGATTCTGATGAGCGCCCCCCTCTCCGGCGACCTGCGCTCCAAGTACAATGTCCGCTCGATGCCGGTTCGCAAGGACGACGAGGTTCAGGTCTTGAGAGGGACCTACAAAGGCCGTGAAGGCAAGGTCGTGCAGGTCTACCGTCGGAAGTGGGTCATCCACATCGAGCGGATCACCAGGGAGAAGGTGAACGGCTCCACCGTCAACGTCGGAATCAATCCCTCCAAGGTTATGATCACGAAGCTCAAGCTCGACAAGGACCGCAAGTCGCTGCTCGATCGTAAGGCCAAGGGTCGCGCTTCTGCCGATAAGGATAAGGGCACTAAATTCACCGCGGAGGATATCATGCAAAGCGTCGACTAATTTTGATCTGGTGAAAATTTTTGCAAGTTATCTCCTTAGTTCTATCCCTTTCTCTGTTTTGATAACTTAATGCTTTTTTGTTTTCTATTCCTCCGAATAGACGATGACAATGTTTTATTGTTTTAATGCTTTGAGTTCTTCAGTTGCTCTCGGTACCTGGATTTTTGGTTGTTTTTCAATGCAATATCATAAGATTCCTTTTGTTAATACCTCTGTTCTTATTCTCTGAATTGAAAATTGTTATCTGATATTGAGATTATTTGACTTCCGGACGGCAGTGATGATTGTTGAAGAACATTAAGCAATTGTGACTTTGAACTGTTTAACCATTTGGGTTTCAAATTTCAAGAACTCTGCTTTGTTGCTTTTATCAAGATTTGAACCCTTGATGCATTGAAGCCCTTTCACCGTATAGTGCCTTTTATTCCCCTTTGAAGATTTCCCTATCAGTAGTAAATTTTTGTATGTTTATTAGAGGTTTGGATTTATTTTAGCTCATTACATTACAACATATGAATTAGATTCTAGGGCCTAGAGGGGGTTGCACTTTGAATTTATACCAATATTTTGCCTTGAAAGTTG

mRNA sequence

GGAGAAAATTGGAAATTATAGATTGAGGGTATTTTGGTAAATATGTGTCGAGTCCAATTTTCCAATTCCTCCAAATAAAAGGGATTAGGGTTTCTTTTTTCCGGGCCTTTCAGCATTGTTCCACAGATTCAGAGAGAGAGCGGCAAAACCCTAATCGAATCGCAATGAAGTACAACCCTAGAGTCTCCAGCTCCCGCCGCAAGAACCGCAAGGCCCACTTCACGGCGCCGTCGAGCGTCCGCCGGATTCTGATGAGCGCCCCCCTCTCCGGCGACCTGCGCTCCAAGTACAATGTCCGCTCGATGCCGGTTCGCAAGGACGACGAGGTTCAGGTCTTGAGAGGGACCTACAAAGGCCGTGAAGGCAAGGTCGTGCAGGTCTACCGTCGGAAGTGGGTCATCCACATCGAGCGGATCACCAGGGAGAAGGTGAACGGCTCCACCGTCAACGTCGGAATCAATCCCTCCAAGGTTATGATCACGAAGCTCAAGCTCGACAAGGACCGCAAGTCGCTGCTCGATCGTAAGGCCAAGGGTCGCGCTTCTGCCGATAAGGATAAGGGCACTAAATTCACCGCGGAGGATATCATGCAAAGCGTCGACTAATTTTGATCTGGTGAAAATTTTTGCAAGTTATCTCCTTAGTTCTATCCCTTTCTCTGTTTTGATAACTTAATGCTTTTTTGTTTTCTATTCCTCCGAATAGACGATGACAATGTTTTATTGTTTTAATGCTTTGAGTTCTTCAGTTGCTCTCGGTACCTGGATTTTTGGTTGTTTTTCAATGCAATATCATAAGATTCCTTTTGTTAATACCTCTGTTCTTATTCTCTGAATTGAAAATTGTTATCTGATATTGAGATTATTTGACTTCCGGACGGCAGTGATGATTGTTGAAGAACATTAAGCAATTGTGACTTTGAACTGTTTAACCATTTGGGTTTCAAATTTCAAGAACTCTGCTTTGTTGCTTTTATCAAGATTTGAACCCTTGATGCATTGAAGCCCTTTCACCGTATAGTGCCTTTTATTCCCCTTTGAAGATTTCCCTATCAGTAGTAAATTTTTGTATGTTTATTAGAGGTTTGGATTTATTTTAGCTCATTACATTACAACATATGAATTAGATTCTAGGGCCTAGAGGGGGTTGCACTTTGAATTTATACCAATATTTTGCCTTGAAAGTTG

Coding sequence (CDS)

ATGAAGTACAACCCTAGAGTCTCCAGCTCCCGCCGCAAGAACCGCAAGGCCCACTTCACGGCGCCGTCGAGCGTCCGCCGGATTCTGATGAGCGCCCCCCTCTCCGGCGACCTGCGCTCCAAGTACAATGTCCGCTCGATGCCGGTTCGCAAGGACGACGAGGTTCAGGTCTTGAGAGGGACCTACAAAGGCCGTGAAGGCAAGGTCGTGCAGGTCTACCGTCGGAAGTGGGTCATCCACATCGAGCGGATCACCAGGGAGAAGGTGAACGGCTCCACCGTCAACGTCGGAATCAATCCCTCCAAGGTTATGATCACGAAGCTCAAGCTCGACAAGGACCGCAAGTCGCTGCTCGATCGTAAGGCCAAGGGTCGCGCTTCTGCCGATAAGGATAAGGGCACTAAATTCACCGCGGAGGATATCATGCAAAGCGTCGACTAA

Protein sequence

MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSGDLRSKYNVRSMPVRKDDEVQVLRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVMITKLKLDKDRKSLLDRKAKGRASADKDKGTKFTAEDIMQSVD
Homology
[Close]
BLAST of MC02g1113 vs. ExPASy Swiss-Prot
Match: P51414 (60S ribosomal protein L26-1 OS=Arabidopsis thaliana OX=3702 GN=RPL26A PE=2 SV=2)

HSP 1 Score: 251.9 bits (642), Expect = 4.4e-66
Identity = 125/146 (85.62%), Postives = 141/146 (96.58%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSGDLRSKYNVRSMPVRKDDEVQVLRG 60
           MKYNPRV+SSRRKNRKAHFTA SS RR++MS+PLS DLR KYNVRSMP+RKDDEVQ++RG
Sbjct: 1   MKYNPRVTSSRRKNRKAHFTASSSERRVIMSSPLSTDLRQKYNVRSMPIRKDDEVQIVRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVMITKLKLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKWVIHIERITREKVNG+TVNVGI PSKV+ITKL+LDKDRKSLL+R
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGTTVNVGIQPSKVVITKLRLDKDRKSLLER 120

Query: 121 KAKGRASADKDKGTKFTAEDIMQSVD 147
           KAKGRA+ADK+KGTKFT+ED+MQ+VD
Sbjct: 121 KAKGRAAADKEKGTKFTSEDVMQNVD 146

[Close]
BLAST of MC02g1113 vs. ExPASy Swiss-Prot
Match: Q9FJX2 (60S ribosomal protein L26-2 OS=Arabidopsis thaliana OX=3702 GN=RPL26B PE=2 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 1.7e-65
Identity = 124/146 (84.93%), Postives = 142/146 (97.26%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSGDLRSKYNVRSMPVRKDDEVQVLRG 60
           MK+NPRVSSSRRKNRKAHFTAPSSVRR+LMS+PLS DLR+K+NVRSMP+RKDDEVQV+RG
Sbjct: 1   MKFNPRVSSSRRKNRKAHFTAPSSVRRVLMSSPLSKDLRNKHNVRSMPIRKDDEVQVVRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVMITKLKLDKDRKSLLDR 120
           T+KGREGKV+QVYRRKWVIHIERITREKVNGSTVNVG+N S VMITKL+LDKDRKSLL+R
Sbjct: 61  TFKGREGKVMQVYRRKWVIHIERITREKVNGSTVNVGVNASNVMITKLRLDKDRKSLLER 120

Query: 121 KAKGRASADKDKGTKFTAEDIMQSVD 147
           KA GRA+ADK+KGTKF+AED+M++VD
Sbjct: 121 KANGRAAADKEKGTKFSAEDVMENVD 146

[Close]
BLAST of MC02g1113 vs. ExPASy Swiss-Prot
Match: Q39411 (60S ribosomal protein L26 OS=Brassica campestris OX=3711 GN=RPL26 PE=2 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.2e-60
Identity = 116/145 (80.00%), Postives = 134/145 (92.41%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSGDLRSKYNVRSMPVRKDDEVQVLRG 60
           MKYNPRV+SSRR+NRK HFTA SS RR+ MS+PLS DLR KYNVRSMP+RKDDE Q++RG
Sbjct: 1   MKYNPRVTSSRRRNRKPHFTASSSERRVXMSSPLSTDLRQKYNVRSMPIRKDDEXQIVRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVMITKLKLDKDRKSLLDR 120
           TYKGREGK+ QVYRRK VIHIER+TREKVNG+TVNVG+ P+KV+ITKL+LDKDRKSLL+R
Sbjct: 61  TYKGREGKLXQVYRRKXVIHIERLTREKVNGTTVNVGVQPTKVVITKLRLDKDRKSLLER 120

Query: 121 KAKGRASADKDKGTKFTAEDIMQSV 146
           KAKGRA+ADKDKGTKFTA D+MQ+V
Sbjct: 121 KAKGRAAADKDKGTKFTAVDVMQNV 145

[Close]
BLAST of MC02g1113 vs. ExPASy Swiss-Prot
Match: P61257 (60S ribosomal protein L26 OS=Bos taurus OX=9913 GN=RPL26 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.1e-44
Identity = 96/142 (67.61%), Postives = 119/142 (83.80%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSGDLRSKYNVRSMPVRKDDEVQVLRG 60
           MK+NP V+S R KNRK HF APS +RR +MS+PLS +LR KYNVRSMP+RKDDEVQV+RG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 61  TYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVMITKLKLDKDRKSLLD 120
            YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+PSKV+IT+LKLDKDRK +L+
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120

Query: 121 RKAKGRASADKDKGTKFTAEDI 142
           RKAK R    K+KG K+  E I
Sbjct: 121 RKAKSR-QVGKEKG-KYKEETI 140

[Close]
BLAST of MC02g1113 vs. ExPASy Swiss-Prot
Match: P61254 (60S ribosomal protein L26 OS=Homo sapiens OX=9606 GN=RPL26 PE=1 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.1e-44
Identity = 96/142 (67.61%), Postives = 119/142 (83.80%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSGDLRSKYNVRSMPVRKDDEVQVLRG 60
           MK+NP V+S R KNRK HF APS +RR +MS+PLS +LR KYNVRSMP+RKDDEVQV+RG
Sbjct: 1   MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRG 60

Query: 61  TYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVMITKLKLDKDRKSLLD 120
            YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+PSKV+IT+LKLDKDRK +L+
Sbjct: 61  HYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILE 120

Query: 121 RKAKGRASADKDKGTKFTAEDI 142
           RKAK R    K+KG K+  E I
Sbjct: 121 RKAKSR-QVGKEKG-KYKEETI 140

[Close]
BLAST of MC02g1113 vs. NCBI nr
Match: XP_022149443.1 (60S ribosomal protein L26-1-like [Momordica charantia])

HSP 1 Score: 278 bits (712), Expect = 3.32e-94
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSGDLRSKYNVRSMPVRKDDEVQVLRG 60
           MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSGDLRSKYNVRSMPVRKDDEVQVLRG
Sbjct: 1   MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSGDLRSKYNVRSMPVRKDDEVQVLRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVMITKLKLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVMITKLKLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVMITKLKLDKDRKSLLDR 120

Query: 121 KAKGRASADKDKGTKFTAEDIMQSVD 146
           KAKGRASADKDKGTKFTAEDIMQSVD
Sbjct: 121 KAKGRASADKDKGTKFTAEDIMQSVD 146

[Close]
BLAST of MC02g1113 vs. NCBI nr
Match: XP_008457837.1 (PREDICTED: 60S ribosomal protein L26-1-like [Cucumis melo] >XP_038900627.1 60S ribosomal protein L26-1-like [Benincasa hispida] >KAA0045834.1 60S ribosomal protein L26-1-like [Cucumis melo var. makuwa] >TYJ99449.1 60S ribosomal protein L26-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 274 bits (700), Expect = 2.24e-92
Identity = 142/146 (97.26%), Postives = 145/146 (99.32%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSGDLRSKYNVRSMPVRKDDEVQVLRG 60
           MKYNPRVSSSRRKNRKAHF+APSSVRRILMSAPLSGDLRSKYNVRSMP+RKDDEVQVLRG
Sbjct: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVMITKLKLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI PSKVMITKLKLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVMITKLKLDKDRKSLLDR 120

Query: 121 KAKGRASADKDKGTKFTAEDIMQSVD 146
           KAKGRASADKDKGTKFTAEDIMQSVD
Sbjct: 121 KAKGRASADKDKGTKFTAEDIMQSVD 146

[Close]
BLAST of MC02g1113 vs. NCBI nr
Match: XP_022948229.1 (60S ribosomal protein L26-1-like [Cucurbita moschata] >XP_023007349.1 60S ribosomal protein L26-1-like [Cucurbita maxima] >XP_023532418.1 60S ribosomal protein L26-1-like [Cucurbita pepo subsp. pepo] >KAG6605230.1 60S ribosomal protein L26-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035196.1 60S ribosomal protein L26-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 273 bits (699), Expect = 3.19e-92
Identity = 140/146 (95.89%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSGDLRSKYNVRSMPVRKDDEVQVLRG 60
           MKYNPRVSSSRRKNRKAHF+APSSVRR+LMSAPLSGDLRSKYNVRSMP+RKDDEVQVLRG
Sbjct: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVMITKLKLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKWVIHIER+TREKVNGSTVNVG+NPSKVMITKLKLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNPSKVMITKLKLDKDRKSLLDR 120

Query: 121 KAKGRASADKDKGTKFTAEDIMQSVD 146
           KAKGRAS+DKDKGTKFTAEDIMQSVD
Sbjct: 121 KAKGRASSDKDKGTKFTAEDIMQSVD 146

[Close]
BLAST of MC02g1113 vs. NCBI nr
Match: XP_022931741.1 (60S ribosomal protein L26-1-like [Cucurbita moschata] >XP_022973193.1 60S ribosomal protein L26-1-like [Cucurbita maxima] >XP_023521000.1 60S ribosomal protein L26-1-like [Cucurbita pepo subsp. pepo] >KAG6571308.1 60S ribosomal protein L26-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019317.1 60S ribosomal protein L26-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 272 bits (696), Expect = 9.14e-92
Identity = 140/146 (95.89%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSGDLRSKYNVRSMPVRKDDEVQVLRG 60
           MKYNPRVSSSRRK+RKAHF+APSSVRR+LMSAPLSGDLRSKYNVRSMP+RKDDEVQVLRG
Sbjct: 1   MKYNPRVSSSRRKSRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVMITKLKLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGINPSKV+ITKLKLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGINPSKVVITKLKLDKDRKSLLDR 120

Query: 121 KAKGRASADKDKGTKFTAEDIMQSVD 146
           KAKGRASADKDKGTKFTAEDIMQSVD
Sbjct: 121 KAKGRASADKDKGTKFTAEDIMQSVD 146

[Close]
BLAST of MC02g1113 vs. NCBI nr
Match: XP_010102767.1 (60S ribosomal protein L26-1 [Morus notabilis] >EXB94051.1 60S ribosomal protein L26-1 [Morus notabilis])

HSP 1 Score: 271 bits (693), Expect = 2.62e-91
Identity = 140/146 (95.89%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSGDLRSKYNVRSMPVRKDDEVQVLRG 60
           MKYNPRVSSSRRK+RKAHFTAPSSVRR+LMSAPLSGDLRSKYNVRSMPVRKDDEVQV+RG
Sbjct: 1   MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSMPVRKDDEVQVVRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVMITKLKLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKV+ITKL+LDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITKLRLDKDRKSLLDR 120

Query: 121 KAKGRASADKDKGTKFTAEDIMQSVD 146
           KAKGRA+ADKDKGTKFTAEDIMQSVD
Sbjct: 121 KAKGRAAADKDKGTKFTAEDIMQSVD 146

[Close]
BLAST of MC02g1113 vs. ExPASy TrEMBL
Match: A0A6J1D6T1 (60S ribosomal protein L26-1-like OS=Momordica charantia OX=3673 GN=LOC111017871 PE=3 SV=1)

HSP 1 Score: 278 bits (712), Expect = 1.61e-94
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSGDLRSKYNVRSMPVRKDDEVQVLRG 60
           MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSGDLRSKYNVRSMPVRKDDEVQVLRG
Sbjct: 1   MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSGDLRSKYNVRSMPVRKDDEVQVLRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVMITKLKLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVMITKLKLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVMITKLKLDKDRKSLLDR 120

Query: 121 KAKGRASADKDKGTKFTAEDIMQSVD 146
           KAKGRASADKDKGTKFTAEDIMQSVD
Sbjct: 121 KAKGRASADKDKGTKFTAEDIMQSVD 146

[Close]
BLAST of MC02g1113 vs. ExPASy TrEMBL
Match: A0A5A7TS06 (60S ribosomal protein L26-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00090 PE=3 SV=1)

HSP 1 Score: 274 bits (700), Expect = 1.09e-92
Identity = 142/146 (97.26%), Postives = 145/146 (99.32%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSGDLRSKYNVRSMPVRKDDEVQVLRG 60
           MKYNPRVSSSRRKNRKAHF+APSSVRRILMSAPLSGDLRSKYNVRSMP+RKDDEVQVLRG
Sbjct: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVMITKLKLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI PSKVMITKLKLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVMITKLKLDKDRKSLLDR 120

Query: 121 KAKGRASADKDKGTKFTAEDIMQSVD 146
           KAKGRASADKDKGTKFTAEDIMQSVD
Sbjct: 121 KAKGRASADKDKGTKFTAEDIMQSVD 146

[Close]
BLAST of MC02g1113 vs. ExPASy TrEMBL
Match: A0A1S3C7Q4 (60S ribosomal protein L26-1-like OS=Cucumis melo OX=3656 GN=LOC103497426 PE=3 SV=1)

HSP 1 Score: 274 bits (700), Expect = 1.09e-92
Identity = 142/146 (97.26%), Postives = 145/146 (99.32%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSGDLRSKYNVRSMPVRKDDEVQVLRG 60
           MKYNPRVSSSRRKNRKAHF+APSSVRRILMSAPLSGDLRSKYNVRSMP+RKDDEVQVLRG
Sbjct: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRILMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVMITKLKLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKW+IHIERITREKVNGSTVNVGI PSKVMITKLKLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWIIHIERITREKVNGSTVNVGIKPSKVMITKLKLDKDRKSLLDR 120

Query: 121 KAKGRASADKDKGTKFTAEDIMQSVD 146
           KAKGRASADKDKGTKFTAEDIMQSVD
Sbjct: 121 KAKGRASADKDKGTKFTAEDIMQSVD 146

[Close]
BLAST of MC02g1113 vs. ExPASy TrEMBL
Match: A0A6J1L4P7 (60S ribosomal protein L26-1-like OS=Cucurbita maxima OX=3661 GN=LOC111499871 PE=3 SV=1)

HSP 1 Score: 273 bits (699), Expect = 1.54e-92
Identity = 140/146 (95.89%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSGDLRSKYNVRSMPVRKDDEVQVLRG 60
           MKYNPRVSSSRRKNRKAHF+APSSVRR+LMSAPLSGDLRSKYNVRSMP+RKDDEVQVLRG
Sbjct: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVMITKLKLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKWVIHIER+TREKVNGSTVNVG+NPSKVMITKLKLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNPSKVMITKLKLDKDRKSLLDR 120

Query: 121 KAKGRASADKDKGTKFTAEDIMQSVD 146
           KAKGRAS+DKDKGTKFTAEDIMQSVD
Sbjct: 121 KAKGRASSDKDKGTKFTAEDIMQSVD 146

[Close]
BLAST of MC02g1113 vs. ExPASy TrEMBL
Match: A0A6J1G998 (60S ribosomal protein L26-1-like OS=Cucurbita moschata OX=3662 GN=LOC111451868 PE=3 SV=1)

HSP 1 Score: 273 bits (699), Expect = 1.54e-92
Identity = 140/146 (95.89%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSGDLRSKYNVRSMPVRKDDEVQVLRG 60
           MKYNPRVSSSRRKNRKAHF+APSSVRR+LMSAPLSGDLRSKYNVRSMP+RKDDEVQVLRG
Sbjct: 1   MKYNPRVSSSRRKNRKAHFSAPSSVRRVLMSAPLSGDLRSKYNVRSMPIRKDDEVQVLRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVMITKLKLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKWVIHIER+TREKVNGSTVNVG+NPSKVMITKLKLDKDRKSLLDR
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERVTREKVNGSTVNVGMNPSKVMITKLKLDKDRKSLLDR 120

Query: 121 KAKGRASADKDKGTKFTAEDIMQSVD 146
           KAKGRAS+DKDKGTKFTAEDIMQSVD
Sbjct: 121 KAKGRASSDKDKGTKFTAEDIMQSVD 146

[Close]
BLAST of MC02g1113 vs. TAIR 10
Match: AT3G49910.1 (Translation protein SH3-like family protein )

HSP 1 Score: 251.9 bits (642), Expect = 3.1e-67
Identity = 125/146 (85.62%), Postives = 141/146 (96.58%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSGDLRSKYNVRSMPVRKDDEVQVLRG 60
           MKYNPRV+SSRRKNRKAHFTA SS RR++MS+PLS DLR KYNVRSMP+RKDDEVQ++RG
Sbjct: 1   MKYNPRVTSSRRKNRKAHFTASSSERRVIMSSPLSTDLRQKYNVRSMPIRKDDEVQIVRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVMITKLKLDKDRKSLLDR 120
           TYKGREGKVVQVYRRKWVIHIERITREKVNG+TVNVGI PSKV+ITKL+LDKDRKSLL+R
Sbjct: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGTTVNVGIQPSKVVITKLRLDKDRKSLLER 120

Query: 121 KAKGRASADKDKGTKFTAEDIMQSVD 147
           KAKGRA+ADK+KGTKFT+ED+MQ+VD
Sbjct: 121 KAKGRAAADKEKGTKFTSEDVMQNVD 146

[Close]
BLAST of MC02g1113 vs. TAIR 10
Match: AT5G67510.1 (Translation protein SH3-like family protein )

HSP 1 Score: 250.0 bits (637), Expect = 1.2e-66
Identity = 124/146 (84.93%), Postives = 142/146 (97.26%), Query Frame = 0 

Query: 1   MKYNPRVSSSRRKNRKAHFTAPSSVRRILMSAPLSGDLRSKYNVRSMPVRKDDEVQVLRG 60
           MK+NPRVSSSRRKNRKAHFTAPSSVRR+LMS+PLS DLR+K+NVRSMP+RKDDEVQV+RG
Sbjct: 1   MKFNPRVSSSRRKNRKAHFTAPSSVRRVLMSSPLSKDLRNKHNVRSMPIRKDDEVQVVRG 60

Query: 61  TYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVMITKLKLDKDRKSLLDR 120
           T+KGREGKV+QVYRRKWVIHIERITREKVNGSTVNVG+N S VMITKL+LDKDRKSLL+R
Sbjct: 61  TFKGREGKVMQVYRRKWVIHIERITREKVNGSTVNVGVNASNVMITKLRLDKDRKSLLER 120

Query: 121 KAKGRASADKDKGTKFTAEDIMQSVD 147
           KA GRA+ADK+KGTKF+AED+M++VD
Sbjct: 121 KANGRAAADKEKGTKFSAEDVMENVD 146

The following BLAST results are available for this feature:
BLAST of MC02g1113 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P514144.4e-6685.6260S ribosomal protein L26-1 OS=Arabidopsis thaliana OX=3702 GN=RPL26A PE=2 SV=2[more]
Q9FJX21.7e-6584.9360S ribosomal protein L26-2 OS=Arabidopsis thaliana OX=3702 GN=RPL26B PE=2 SV=1[more]
Q394111.2e-6080.0060S ribosomal protein L26 OS=Brassica campestris OX=3711 GN=RPL26 PE=2 SV=1[more]
P612572.1e-4467.6160S ribosomal protein L26 OS=Bos taurus OX=9913 GN=RPL26 PE=2 SV=1[more]
P612542.1e-4467.6160S ribosomal protein L26 OS=Homo sapiens OX=9606 GN=RPL26 PE=1 SV=1[more]
BLAST of MC02g1113 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022149443.13.32e-94100.0060S ribosomal protein L26-1-like [Momordica charantia][more]
XP_008457837.12.24e-9297.26PREDICTED: 60S ribosomal protein L26-1-like [Cucumis melo] >XP_038900627.1 60S r... [more]
XP_022948229.13.19e-9295.8960S ribosomal protein L26-1-like [Cucurbita moschata] >XP_023007349.1 60S riboso... [more]
XP_022931741.19.14e-9295.8960S ribosomal protein L26-1-like [Cucurbita moschata] >XP_022973193.1 60S riboso... [more]
XP_010102767.12.62e-9195.8960S ribosomal protein L26-1 [Morus notabilis] >EXB94051.1 60S ribosomal protein ... [more]
BLAST of MC02g1113 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D6T11.61e-94100.0060S ribosomal protein L26-1-like OS=Momordica charantia OX=3673 GN=LOC111017871 ... [more]
A0A5A7TS061.09e-9297.2660S ribosomal protein L26-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A1S3C7Q41.09e-9297.2660S ribosomal protein L26-1-like OS=Cucumis melo OX=3656 GN=LOC103497426 PE=3 SV... [more]
A0A6J1L4P71.54e-9295.8960S ribosomal protein L26-1-like OS=Cucurbita maxima OX=3661 GN=LOC111499871 PE=... [more]
A0A6J1G9981.54e-9295.8960S ribosomal protein L26-1-like OS=Cucurbita moschata OX=3662 GN=LOC111451868 P... [more]
BLAST of MC02g1113 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G49910.13.1e-6785.62Translation protein SH3-like family protein [more]
AT5G67510.11.2e-6684.93Translation protein SH3-like family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005824KOWSMARTSM00739kow_9coord: 48..75
e-value: 8.9E-6
score: 35.2
IPR005824KOWPFAMPF00467KOWcoord: 51..82
e-value: 1.8E-9
score: 37.2
IPR005756Ribosomal protein L26/L24, eukaryotic/archaealTIGRFAMTIGR01080TIGR01080coord: 8..122
e-value: 3.2E-52
score: 173.8
IPR005756Ribosomal protein L26/L24, eukaryotic/archaealPFAMPF16906Ribosomal_L26coord: 8..121
e-value: 1.2E-38
score: 132.0
IPR005756Ribosomal protein L26/L24, eukaryotic/archaealPANTHERPTHR1114360S RIBOSOMAL PROTEIN L26 FAMILY MEMBERcoord: 1..146
IPR005756Ribosomal protein L26/L24, eukaryotic/archaealHAMAPMF_01326_ARibosomal_L24_Acoord: 9..121
score: 20.761597
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 1..144
e-value: 2.5E-57
score: 194.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..137
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..146
NoneNo IPR availablePANTHERPTHR11143:SF1560S RIBOSOMAL PROTEIN L26-1-LIKEcoord: 1..146
IPR005825Ribosomal protein L24/L26, conserved sitePROSITEPS01108RIBOSOMAL_L24coord: 52..69
IPR041988Ribosomal protein L26/L24, KOW domainCDDcd06089KOW_RPL26coord: 52..105
e-value: 3.25155E-16
score: 66.3842
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 8..125

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC02g1113.1MC02g1113.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0042273 ribosomal large subunit biogenesis
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome