MC02g1110 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC02g1110
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionIntron maturase, type II family protein
LocationMC02: 9461362 .. 9461436 (+)
RNA-Seq ExpressionMC02g1110
SyntenyMC02g1110
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GCACATAGTACAGTAGAATGTTTTGGTACGATCATAGGGGAAGTCCCTCCAAAGACGACTCCTATACAATTCTTG

mRNA sequence

GCACATAGTACAGTAGAATGTTTTGGTACGATCATAGGGGAAGTCCCTCCAAAGACGACTCCTATACAATTCTTG

Coding sequence (CDS)

GCACATAGTACAGTAGAATGTTTTGGTACGATCATAGGGGAAGTCCCTCCAAAGACGACTCCTATACAATTCTTG

Protein sequence

AHSTVECFGTIIGEVPPKTTPIQFL
Homology
[Close]
BLAST of MC02g1110 vs. NCBI nr
Match: AFN53465.1 (maturase, partial [Roridula dentata])

HSP 1 Score: 46.2 bits (108), Expect = 2.21e-04
Identity = 21/25 (84.00%), Postives = 21/25 (84.00%), Query Frame = 0 

Query: 1   AHSTVECFGTIIGEVPPKTTPIQFL 25
           A STVE  GTII EVPPKTTPIQFL
Sbjct: 329 ARSTVEFLGTIIREVPPKTTPIQFL 353

[Close]
BLAST of MC02g1110 vs. NCBI nr
Match: AFN53464.1 (maturase, partial [Roridula gorgonias])

HSP 1 Score: 46.2 bits (108), Expect = 2.21e-04
Identity = 21/25 (84.00%), Postives = 21/25 (84.00%), Query Frame = 0 

Query: 1   AHSTVECFGTIIGEVPPKTTPIQFL 25
           A STVE  GTII EVPPKTTPIQFL
Sbjct: 329 ARSTVEFLGTIIREVPPKTTPIQFL 353

[Close]
BLAST of MC02g1110 vs. NCBI nr
Match: AFB18217.1 (intron maturase, partial [Roridula dentata])

HSP 1 Score: 46.2 bits (108), Expect = 2.22e-04
Identity = 21/25 (84.00%), Postives = 21/25 (84.00%), Query Frame = 0 

Query: 1   AHSTVECFGTIIGEVPPKTTPIQFL 25
           A STVE  GTII EVPPKTTPIQFL
Sbjct: 282 ARSTVEFLGTIIREVPPKTTPIQFL 306

[Close]
BLAST of MC02g1110 vs. NCBI nr
Match: AAM18414.1 (maturase, partial [Clavija domingensis])

HSP 1 Score: 46.2 bits (108), Expect = 2.22e-04
Identity = 21/25 (84.00%), Postives = 21/25 (84.00%), Query Frame = 0 

Query: 1   AHSTVECFGTIIGEVPPKTTPIQFL 25
           A STVE  GTII EVPPKTTPIQFL
Sbjct: 272 ARSTVEFLGTIIREVPPKTTPIQFL 296

[Close]
BLAST of MC02g1110 vs. NCBI nr
Match: YP_003875495.1 (maturase [Silene latifolia] >ADG85283.1 maturase [Silene latifolia] >ADK73319.1 maturase [Silene latifolia])

HSP 1 Score: 45.8 bits (107), Expect = 3.01e-04
Identity = 20/25 (80.00%), Postives = 21/25 (84.00%), Query Frame = 0 

Query: 1   AHSTVECFGTIIGEVPPKTTPIQFL 25
           A STVE  GT+I EVPPKTTPIQFL
Sbjct: 355 ARSTVEFLGTVIREVPPKTTPIQFL 379

[Close]
BLAST of MC02g1110 vs. ExPASy TrEMBL
Match: I6YHE7 (Maturase (Fragment) OS=Roridula dentata OX=326866 GN=matR PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 1.07e-04
Identity = 21/25 (84.00%), Postives = 21/25 (84.00%), Query Frame = 0 

Query: 1   AHSTVECFGTIIGEVPPKTTPIQFL 25
           A STVE  GTII EVPPKTTPIQFL
Sbjct: 329 ARSTVEFLGTIIREVPPKTTPIQFL 353

[Close]
BLAST of MC02g1110 vs. ExPASy TrEMBL
Match: I6XC73 (Maturase (Fragment) OS=Roridula gorgonias OX=3772 GN=matR PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 1.07e-04
Identity = 21/25 (84.00%), Postives = 21/25 (84.00%), Query Frame = 0 

Query: 1   AHSTVECFGTIIGEVPPKTTPIQFL 25
           A STVE  GTII EVPPKTTPIQFL
Sbjct: 329 ARSTVEFLGTIIREVPPKTTPIQFL 353

[Close]
BLAST of MC02g1110 vs. ExPASy TrEMBL
Match: I6NNQ0 (Intron maturase (Fragment) OS=Roridula dentata OX=326866 GN=matR PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 1.07e-04
Identity = 21/25 (84.00%), Postives = 21/25 (84.00%), Query Frame = 0 

Query: 1   AHSTVECFGTIIGEVPPKTTPIQFL 25
           A STVE  GTII EVPPKTTPIQFL
Sbjct: 282 ARSTVEFLGTIIREVPPKTTPIQFL 306

[Close]
BLAST of MC02g1110 vs. ExPASy TrEMBL
Match: Q8SIB2 (Maturase (Fragment) OS=Clavija domingensis OX=110863 GN=matR PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 1.07e-04
Identity = 21/25 (84.00%), Postives = 21/25 (84.00%), Query Frame = 0 

Query: 1   AHSTVECFGTIIGEVPPKTTPIQFL 25
           A STVE  GTII EVPPKTTPIQFL
Sbjct: 272 ARSTVEFLGTIIREVPPKTTPIQFL 296

[Close]
BLAST of MC02g1110 vs. ExPASy TrEMBL
Match: D7RMX2 (Maturase OS=Silene latifolia OX=37657 GN=matR PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 1.46e-04
Identity = 20/25 (80.00%), Postives = 21/25 (84.00%), Query Frame = 0 

Query: 1   AHSTVECFGTIIGEVPPKTTPIQFL 25
           A STVE  GT+I EVPPKTTPIQFL
Sbjct: 355 ARSTVEFLGTVIREVPPKTTPIQFL 379

[Close]
BLAST of MC02g1110 vs. TAIR 10
Match: ATMG00520.1 (Intron maturase, type II family protein )

HSP 1 Score: 43.1 bits (100), Expect = 3.8e-05
Identity = 19/25 (76.00%), Postives = 21/25 (84.00%), Query Frame = 0 

Query: 1   AHSTVECFGTIIGEVPPKTTPIQFL 26
           A STVE  GT+I EVPP+TTPIQFL
Sbjct: 365 ARSTVEFLGTVIREVPPRTTPIQFL 389

The following BLAST results are available for this feature:
BLAST of MC02g1110 vs.
Match NameE-valueIdentityDescription
BLAST of MC02g1110 vs. NCBI nr
Match NameE-valueIdentityDescription
AFN53465.12.21e-0484.00maturase, partial [Roridula dentata][more]
AFN53464.12.21e-0484.00maturase, partial [Roridula gorgonias][more]
AFB18217.12.22e-0484.00intron maturase, partial [Roridula dentata][more]
AAM18414.12.22e-0484.00maturase, partial [Clavija domingensis][more]
YP_003875495.13.01e-0480.00maturase [Silene latifolia] >ADG85283.1 maturase [Silene latifolia] >ADK73319.1 ... [more]
BLAST of MC02g1110 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
I6YHE71.07e-0484.00Maturase (Fragment) OS=Roridula dentata OX=326866 GN=matR PE=4 SV=1[more]
I6XC731.07e-0484.00Maturase (Fragment) OS=Roridula gorgonias OX=3772 GN=matR PE=4 SV=1[more]
I6NNQ01.07e-0484.00Intron maturase (Fragment) OS=Roridula dentata OX=326866 GN=matR PE=4 SV=1[more]
Q8SIB21.07e-0484.00Maturase (Fragment) OS=Clavija domingensis OX=110863 GN=matR PE=4 SV=1[more]
D7RMX21.46e-0480.00Maturase OS=Silene latifolia OX=37657 GN=matR PE=2 SV=1[more]
BLAST of MC02g1110 vs. TAIR 10
Match NameE-valueIdentityDescription
ATMG00520.13.8e-0576.00Intron maturase, type II family protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC02g1110.1MC02g1110.1mRNA