MC02g1007 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g1007
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	expressed protein localized to the inner membrane of the chloroplast.
Location	MC02: 8079505 .. 8082994 (+)
RNA-Seq Expression	MC02g1007
Synteny	MC02g1007

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAATTAAAAAAAATTTAGTTAATTATTATAAAATAGGTAATAGAGGCTAACAATAAGCCAGCTATCTTCTCCACTCTCGACTCGCCCGCCCGCTCTTTGTTCTTCCTCTCTCTCTTCTTAATTTTGCTTGAATTCTCTCTACATCTCTGCTCTCGTTCTTGCCCATGGCCGCCTGCTTCGCTCCTTCGCTGTCCGTGTCTGGTAAATCCTCTCTTTTCTATCTCAATATTGCACTTCAAGGCTTTCATTTCCATATGCATGTTCTCAATTCACATGATTGTGTGTTTGTCTCGAGTGATCGAGTAGGTCGAACTTTTTCCTAAACGATTATCGCCTGTTCGCAAACAGGTAATTTTATAAATAAAATAATGATCGTGTTCAGTGTCCCTGGAACATTGATTTCGCATTTCAATTAACGTTGAGTTCGGTGTGGGTTTGCTGTCATAGACGTTTCGTAACTTTGAAGAGGTTTTGAAAATTAGATTATTGATTTCTTTTTTACTTCTCGTCGAGTTCGATGTGGATTGGTAATCCGTTTGTACTTGGGTCTTATGTCTTTTATTCGTTTATTCGGTGTTTAGGGGGATTGATCAAGGCGTCAGATCTCTCCTCGAAGTCCATTACCTTTGGGCAAGCACCAAAACTCGCCATTCAAAAGAAGTGCTTGAGAACCAACCGCAAGTTATCTGTTCGTGCAGAGTACAAGTACGTTATGTTGGATTATTCGATGAACGAAGCTTATTGACTTCAATTTTTTAAATGACTGAAATACTTTGCTTTTATTAACGGTCACGTTGGCTGTATTTCAGCATGACTGAAAACTGAGATGGATATGGAGGATTAGTCTTCTTAGTGTTGGGCTTCTTATGTTACGTGAATCTAGTTATTTCAGATGTTGTTGGCGTTTTGAGTGATTTTAGTTGCTAAAAGTTCAACTTGGTGAAATAATGGATCGTATTGTGTAGTTGCAATACCAACCATGTATGCTTATTAGAAAAAGGGGTGCTGGGTTAATAGAAGGAGAAACTAGAATCTTCTTTGGCTCCATATATTTTAGGATCAAGTGGTATGCCTATGGGTTAGTCTTATGTATATGCTTTGACACCTATATTGGATTGATATTCTGGGGGCCAAAAAATAGTTAACATCTTGACTTTACTTTGTCATTTTGGTGATATCAAACTTCTATCTAAGTTCTCTTGTTTCTTTCAATATCTCTAGATTATTAGGAAGATAAACTCCAATCGTAAAAGTTTTTCATTTTGTCAGCTTAGATACAGGCATTTAATGATCCATCTAAGAGCAGCCCAGTTCTATTTACTCTGGGAATATATTTCATGGGGAAGTCCTTCCTTTGTAATCTACTGGTTTGATGTCCTTCCTTTGTAATCTACTGGTTTGATGTTATGTCCTGCATTCTGAAGGACCGCTGGACTAATAGTTACAAAGAATTTTCTTGGTTTGGGATTTGAAAAAGGATATTCAGATACAGCAAAGAGATCTAATTTTTAAAATTTTTTCTTTTTTTTTTTTTTTTTTTTTATCCTTTTACAAGAAATGGAGTTTTCATTGAGAAACATGAAAAAATATAAAAGGGCATATGTGATATGGACATTCCAACAAAAGAAGCCAAGCCAAACTAACTACAAAAAGGACTCCAATATAGAAGTATAAGGCATAGCAAATAATTATAGAAGTTCTTGGTAACCAAACCAGTGAGACATCTTAAACCTAGCAAGGGACTAAACCTCTTTCCAAAACATTTCATTCTCTCTAAAATCATATTATTCTTAAACCAAAGGGACCAAACCTCTTCCCAGTCTTTAACCTATCTCTGACAGTTTTATCCCGTGTTCCCCTTTCATTGATGGTTATTTCAATCAATTAGCTGCTTGTTTGAAGTTGTATCATTTTGATCGCTTAAATTGCTTGTCATAAATATTTAATCAATAGTAAGCCGACTTGGACACAAAAGGAAGAAAATAAATATTTAATCAATATTTATCCCTACCCCCCTCCTTCCTGAACACATTTATATATATAAGATGAAAGTGTAATGCCTTGACAAGTTTGTTTTTTTTACAGTGATGGTAGAGGTGGAGGTGGGGATTTTGTTGCTGGTTTTCTTCTAGGGGGTGCAGTATTTGGAACTTTAGCTTATATTTTTGCTCCGCAGGTGACTGAATGTTTTATTCTAAAGTGAAATTATGATTTTGGATTTGATATCACCATCAATGTTTTAGTTCAGTTAGGGTATTTGTATGTTTTATCTGACTTCATGAAGCTAACAGTTACATGTTTGAGGAAACTGATGCACTTGTTTTACTTTGAAGTCGTTTTCAACTCAATAAGCTAGTTCAGAAGGCTGATGATTTCTTTGCCCCACATAAGATTCATTGTTGCGTTTAGTTACTCATCTTTTCATTAATTTTAGAATTGGCCTGCATCATAAGCTCCTGTTTGATAGTTATATACTCTGGCTTTTTCTTAAGCTTCTTTGAGTGAATCATGTAGCTTGTCCTAGTATGAAATTTCCATTTCTTGCCCTTGTGATCGTGTGCACCTTATGCAGATCAGGAGATCTCTACTAAATGAAGACGAGTACGGTTTTCGGAGGGCCAAGCGTCCAATCTACTATGACGAAGGTTTAGAGGTAATTCTAATGACTTGCCCTTTTTATAGATACGTTTTTTTTCTTATGAGACTTAGTTTCCTACATCAAATAAAAATTAAGCTTATAAATCTAATCCTACTCTAAATTTTCAAAATTTTCAATTATGTACCTAAATTATTCTATTGCTTTAGCAGTCTGTATTTATTTTGTTCAATTGCCAATGTTTTGTTCAATCAGAAACCATATAGAATCACAACCCAAAATTTAGGGACATAATTGGTTTTTTTTTTTCCTTTTTAAATTTATGGACAAATAGGCACCCTCTATGAAGTTCATACACTAGATTTGTCATTTACCGAGACTTGTCGATGTGAACACACGCTGTGTCATGTTAGCATGAAAACCTCAGTAAACTAACAATGAAGCTTTTTTATTTGTTTACTCAACCTGTAAACAAACAAAAAAAAGATTCGAACGTCTAAATTGTCTCCATCTGTAATTACAATCTTCTATCTCTCGTAGCTCATTGGAAAAGTTTTCTTGGATGGGAACTCTGTATATATATATCTTAGTAAAGCTTGATTTTTGTGAAAAGCAGAAAACCAGACAGACGTTGAATGCAAAAATAGGCCAATTGAATTCTGCCATTGACAATGTATCTTCACGTCTGAGAGGTGGAAACAATACACCAGCTGTGCCAGTTGAAGCTGATCCTGAGAAAGAAGCTACCATGTAAATTCACACCTTTGTTGATCATAACTTCAAAAGTTTCCAACTTTTACATCTTACAGACCATATCATGTCATATGCCACAATTTTTAATTCACTTTTTTTTTGGGTTGATCAAGATCATTGCTGGGTGACACAGTTTATT

mRNA sequence

GAAAATTAAAAAAAATTTAGTTAATTATTATAAAATAGGTAATAGAGGCTAACAATAAGCCAGCTATCTTCTCCACTCTCGACTCGCCCGCCCGCTCTTTGTTCTTCCTCTCTCTCTTCTTAATTTTGCTTGAATTCTCTCTACATCTCTGCTCTCGTTCTTGCCCATGGCCGCCTGCTTCGCTCCTTCGCTGTCCGTGTCTGGGGGATTGATCAAGGCGTCAGATCTCTCCTCGAAGTCCATTACCTTTGGGCAAGCACCAAAACTCGCCATTCAAAAGAAGTGCTTGAGAACCAACCGCAAGTTATCTGTTCGTGCAGAGTACAATGATGGTAGAGGTGGAGGTGGGGATTTTGTTGCTGGTTTTCTTCTAGGGGGTGCAGTATTTGGAACTTTAGCTTATATTTTTGCTCCGCAGATCAGGAGATCTCTACTAAATGAAGACGAGTACGGTTTTCGGAGGGCCAAGCGTCCAATCTACTATGACGAAGGTTTAGAGAAAACCAGACAGACGTTGAATGCAAAAATAGGCCAATTGAATTCTGCCATTGACAATGTATCTTCACGTCTGAGAGGTGGAAACAATACACCAGCTGTGCCAGTTGAAGCTGATCCTGAGAAAGAAGCTACCATGTAAATTCACACCTTTGTTGATCATAACTTCAAAAGTTTCCAACTTTTACATCTTACAGACCATATCATGTCATATGCCACAATTTTTAATTCACTTTTTTTTTGGGTTGATCAAGATCATTGCTGGGTGACACAGTTTATT

Coding sequence (CDS)

ATGGCCGCCTGCTTCGCTCCTTCGCTGTCCGTGTCTGGGGGATTGATCAAGGCGTCAGATCTCTCCTCGAAGTCCATTACCTTTGGGCAAGCACCAAAACTCGCCATTCAAAAGAAGTGCTTGAGAACCAACCGCAAGTTATCTGTTCGTGCAGAGTACAATGATGGTAGAGGTGGAGGTGGGGATTTTGTTGCTGGTTTTCTTCTAGGGGGTGCAGTATTTGGAACTTTAGCTTATATTTTTGCTCCGCAGATCAGGAGATCTCTACTAAATGAAGACGAGTACGGTTTTCGGAGGGCCAAGCGTCCAATCTACTATGACGAAGGTTTAGAGAAAACCAGACAGACGTTGAATGCAAAAATAGGCCAATTGAATTCTGCCATTGACAATGTATCTTCACGTCTGAGAGGTGGAAACAATACACCAGCTGTGCCAGTTGAAGCTGATCCTGAGAAAGAAGCTACCATGTAA

Protein sequence

MAACFAPSLSVSGGLIKASDLSSKSITFGQAPKLAIQKKCLRTNRKLSVRAEYNDGRGGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNAKIGQLNSAIDNVSSRLRGGNNTPAVPVEADPEKEATM

Homology

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BLAST of MC02g1007 vs. NCBI nr
Match: XP_022148671.1 (uncharacterized protein LOC111017273 [Momordica charantia])

HSP 1 Score: 305 bits (780), Expect = 3.00e-104
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MAACFAPSLSVSGGLIKASDLSSKSITFGQAPKLAIQKKCLRTNRKLSVRAEYNDGRGGG 60
           MAACFAPSLSVSGGLIKASDLSSKSITFGQAPKLAIQKKCLRTNRKLSVRAEYNDGRGGG
Sbjct: 1   MAACFAPSLSVSGGLIKASDLSSKSITFGQAPKLAIQKKCLRTNRKLSVRAEYNDGRGGG 60

Query: 61  GDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNAK 120
           GDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNAK
Sbjct: 61  GDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNAK 120

Query: 121 IGQLNSAIDNVSSRLRGGNNTPAVPVEADPEKEATM 156
           IGQLNSAIDNVSSRLRGGNNTPAVPVEADPEKEATM
Sbjct: 121 IGQLNSAIDNVSSRLRGGNNTPAVPVEADPEKEATM 156

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BLAST of MC02g1007 vs. NCBI nr
Match: XP_038902580.1 (uncharacterized protein LOC120089235 [Benincasa hispida])

HSP 1 Score: 282 bits (721), Expect = 3.08e-95
Identity = 148/157 (94.27%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MAACFAPSLSVSGGLIKASDLSSKSITFGQAPKLAIQKKCLRTNRKLSVRAEYNDG-RGG 60
           MAACFAPSLSVSGGLIKASDLSSKSI+FGQAPKLAIQ+K  RTN+KLSVRAEYNDG R G
Sbjct: 1   MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKSSRTNQKLSVRAEYNDGDRSG 60

Query: 61  GGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNA 120
           GGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNA
Sbjct: 61  GGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNA 120

Query: 121 KIGQLNSAIDNVSSRLRGGNNTPAVPVEADPEKEATM 156
           KI QLNSAIDNVSSRLRGGNNTPAVPVEADPE EATM
Sbjct: 121 KISQLNSAIDNVSSRLRGGNNTPAVPVEADPEIEATM 157

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BLAST of MC02g1007 vs. NCBI nr
Match: KAG7010970.1 (hypothetical protein SDJN02_27768, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 278 bits (710), Expect = 1.47e-93
Identity = 143/157 (91.08%), Postives = 150/157 (95.54%), Query Frame = 0


Query: 1   MAACFAPSLSVSGGLIKASDLSSKSITFGQAPKLAIQKKCLRTNRKLSVRAEYNDG-RGG 60
           MAACFAPSLSVSGGLIKASDLSSKSI+FGQAPKLAIQ+KC RTN KLSVRAEYNDG R G
Sbjct: 1   MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTNHKLSVRAEYNDGGRNG 60

Query: 61  GGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNA 120
           GG+FVAGFLLGGAVFGTLAYIFAPQIRRS+LNEDEYGFRRA+RPIYYD+GLEKTRQTLN 
Sbjct: 61  GGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNE 120

Query: 121 KIGQLNSAIDNVSSRLRGGNNTPAVPVEADPEKEATM 156
           KIGQLNSAIDNVSSRLRGGN TP+VPVEADPE EATM
Sbjct: 121 KIGQLNSAIDNVSSRLRGGNKTPSVPVEADPEIEATM 157

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BLAST of MC02g1007 vs. NCBI nr
Match: XP_023512433.1 (uncharacterized protein LOC111777191 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 277 bits (709), Expect = 2.08e-93
Identity = 143/157 (91.08%), Postives = 149/157 (94.90%), Query Frame = 0


Query: 1   MAACFAPSLSVSGGLIKASDLSSKSITFGQAPKLAIQKKCLRTNRKLSVRAEYNDG-RGG 60
           MAACFAPSLSVSGGLIKASDLSSKSI+FGQ PKLAIQ+KC RTN KLSVRAEYNDG R G
Sbjct: 1   MAACFAPSLSVSGGLIKASDLSSKSISFGQTPKLAIQRKCSRTNHKLSVRAEYNDGGRSG 60

Query: 61  GGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNA 120
           GG+FVAGFLLGGAVFGTLAYIFAPQIRRS+LNEDEYGFRRA+RPIYYD+GLEKTRQTLN 
Sbjct: 61  GGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNE 120

Query: 121 KIGQLNSAIDNVSSRLRGGNNTPAVPVEADPEKEATM 156
           KIGQLNSAIDNVSSRLRGGN TPAVPVEADPE EATM
Sbjct: 121 KIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM 157

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BLAST of MC02g1007 vs. NCBI nr
Match: XP_022944447.1 (uncharacterized protein LOC111448897 [Cucurbita moschata])

HSP 1 Score: 277 bits (708), Expect = 2.96e-93
Identity = 143/157 (91.08%), Postives = 150/157 (95.54%), Query Frame = 0


Query: 1   MAACFAPSLSVSGGLIKASDLSSKSITFGQAPKLAIQKKCLRTNRKLSVRAEYNDG-RGG 60
           MAACFAPSLSVSGGLIKASDLSSKSI+FGQAPKLAIQ+KC RT+ KLSVRAEYNDG R G
Sbjct: 1   MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNG 60

Query: 61  GGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNA 120
           GG+FVAGFLLGGAVFGTLAYIFAPQIRRS+LNEDEYGFRRA+RPIYYD+GLEKTRQTLN 
Sbjct: 61  GGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNE 120

Query: 121 KIGQLNSAIDNVSSRLRGGNNTPAVPVEADPEKEATM 156
           KIGQLNSAIDNVSSRLRGGN TPAVPVEADPE EATM
Sbjct: 121 KIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM 157

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BLAST of MC02g1007 vs. ExPASy TrEMBL
Match: A0A6J1D647 (uncharacterized protein LOC111017273 OS=Momordica charantia OX=3673 GN=LOC111017273 PE=4 SV=1)

HSP 1 Score: 305 bits (780), Expect = 1.45e-104
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MAACFAPSLSVSGGLIKASDLSSKSITFGQAPKLAIQKKCLRTNRKLSVRAEYNDGRGGG 60
           MAACFAPSLSVSGGLIKASDLSSKSITFGQAPKLAIQKKCLRTNRKLSVRAEYNDGRGGG
Sbjct: 1   MAACFAPSLSVSGGLIKASDLSSKSITFGQAPKLAIQKKCLRTNRKLSVRAEYNDGRGGG 60

Query: 61  GDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNAK 120
           GDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNAK
Sbjct: 61  GDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNAK 120

Query: 121 IGQLNSAIDNVSSRLRGGNNTPAVPVEADPEKEATM 156
           IGQLNSAIDNVSSRLRGGNNTPAVPVEADPEKEATM
Sbjct: 121 IGQLNSAIDNVSSRLRGGNNTPAVPVEADPEKEATM 156

[Close]

BLAST of MC02g1007 vs. ExPASy TrEMBL
Match: A0A6J1FVP6 (uncharacterized protein LOC111448897 OS=Cucurbita moschata OX=3662 GN=LOC111448897 PE=4 SV=1)

HSP 1 Score: 277 bits (708), Expect = 1.43e-93
Identity = 143/157 (91.08%), Postives = 150/157 (95.54%), Query Frame = 0


Query: 1   MAACFAPSLSVSGGLIKASDLSSKSITFGQAPKLAIQKKCLRTNRKLSVRAEYNDG-RGG 60
           MAACFAPSLSVSGGLIKASDLSSKSI+FGQAPKLAIQ+KC RT+ KLSVRAEYNDG R G
Sbjct: 1   MAACFAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRTSHKLSVRAEYNDGGRNG 60

Query: 61  GGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNA 120
           GG+FVAGFLLGGAVFGTLAYIFAPQIRRS+LNEDEYGFRRA+RPIYYD+GLEKTRQTLN 
Sbjct: 61  GGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNE 120

Query: 121 KIGQLNSAIDNVSSRLRGGNNTPAVPVEADPEKEATM 156
           KIGQLNSAIDNVSSRLRGGN TPAVPVEADPE EATM
Sbjct: 121 KIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM 157

[Close]

BLAST of MC02g1007 vs. ExPASy TrEMBL
Match: A0A6J1JGK4 (uncharacterized protein LOC111484314 OS=Cucurbita maxima OX=3661 GN=LOC111484314 PE=4 SV=1)

HSP 1 Score: 275 bits (703), Expect = 8.29e-93
Identity = 142/157 (90.45%), Postives = 149/157 (94.90%), Query Frame = 0


Query: 1   MAACFAPSLSVSGGLIKASDLSSKSITFGQAPKLAIQKKCLRTNRKLSVRAEYNDG-RGG 60
           MAAC APSLSVSGGLIKASDLSSKSI+FGQAPKLAIQ+KC R+N KLSVRAEYNDG R G
Sbjct: 1   MAACLAPSLSVSGGLIKASDLSSKSISFGQAPKLAIQRKCSRSNHKLSVRAEYNDGGRSG 60

Query: 61  GGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNA 120
           GG+FVAGFLLGGAVFGTLAYIFAPQIRRS+LNEDEYGFRRA+RPIYYD+GLEKTRQTLN 
Sbjct: 61  GGEFVAGFLLGGAVFGTLAYIFAPQIRRSILNEDEYGFRRARRPIYYDDGLEKTRQTLNE 120

Query: 121 KIGQLNSAIDNVSSRLRGGNNTPAVPVEADPEKEATM 156
           KIGQLNSAIDNVSSRLRGGN TPAVPVEADPE EATM
Sbjct: 121 KIGQLNSAIDNVSSRLRGGNKTPAVPVEADPEIEATM 157

[Close]

BLAST of MC02g1007 vs. ExPASy TrEMBL
Match: A0A5D3CQ66 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00050 PE=4 SV=1)

HSP 1 Score: 270 bits (690), Expect = 8.22e-91
Identity = 140/158 (88.61%), Postives = 150/158 (94.94%), Query Frame = 0


Query: 1   MAACFAPSLSVSGGLIKASDLSSKSITFGQAPKLAIQKKCLRTNRKLSVRAEYNDG-RGG 60
           MAACFAPSLSVSGGLIKASDLSSKS++FGQ PKLAI++KC +TN KLSVRAEYNDG R G
Sbjct: 1   MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSG 60

Query: 61  GGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNA 120
           GGDFVAGFLLGGAVFGTLAY+FAPQIRRS+LNEDE+GFRRAKRP+YYDEGLEKTRQTLNA
Sbjct: 61  GGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRRAKRPMYYDEGLEKTRQTLNA 120

Query: 121 KIGQLNSAIDNVSSRLRGGNNTPAVPVE-ADPEKEATM 156
           KI QLNSAIDNVSSRLRGGNNTPAVPVE A+PE EATM
Sbjct: 121 KISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEATM 158

[Close]

BLAST of MC02g1007 vs. ExPASy TrEMBL
Match: A0A1S3C9M4 (uncharacterized protein LOC103498395 OS=Cucumis melo OX=3656 GN=LOC103498395 PE=4 SV=1)

HSP 1 Score: 270 bits (690), Expect = 8.22e-91
Identity = 140/158 (88.61%), Postives = 150/158 (94.94%), Query Frame = 0


Query: 1   MAACFAPSLSVSGGLIKASDLSSKSITFGQAPKLAIQKKCLRTNRKLSVRAEYNDG-RGG 60
           MAACFAPSLSVSGGLIKASDLSSKS++FGQ PKLAI++KC +TN KLSVRAEYNDG R G
Sbjct: 1   MAACFAPSLSVSGGLIKASDLSSKSVSFGQTPKLAIRRKCSKTNHKLSVRAEYNDGGRSG 60

Query: 61  GGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLNA 120
           GGDFVAGFLLGGAVFGTLAY+FAPQIRRS+LNEDE+GFRRAKRP+YYDEGLEKTRQTLNA
Sbjct: 61  GGDFVAGFLLGGAVFGTLAYLFAPQIRRSILNEDEHGFRRAKRPMYYDEGLEKTRQTLNA 120

Query: 121 KIGQLNSAIDNVSSRLRGGNNTPAVPVE-ADPEKEATM 156
           KI QLNSAIDNVSSRLRGGNNTPAVPVE A+PE EATM
Sbjct: 121 KISQLNSAIDNVSSRLRGGNNTPAVPVEEAEPEIEATM 158

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BLAST of MC02g1007 vs. TAIR 10
Match: AT5G16660.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 166.0 bits (419), Expect = 2.4e-41
Identity = 106/168 (63.10%), Postives = 121/168 (72.02%), Query Frame = 0


Query: 1   MAACFAPS-LSVSG----GLIKASDLS--SKSITFGQAPKLAIQKKCLRTNRKLSVRAEY 60
           MA+C A + LS+SG      +KA+ LS  +K  +  +   L I KK  RT RK SV A Y
Sbjct: 1   MASCIATAPLSLSGVSQSHYVKANGLSTTTKLSSICKTSDLTIHKKSNRT-RKFSVSAGY 60

Query: 61  NDG--RGGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLN-EDEYGFRRAKRPIYYDEGL 120
            DG   G  GDF+AGFLLGGAVFG +AYIFAPQIRRS+LN EDEYGF + K+P YYDEGL
Sbjct: 61  RDGSRSGSSGDFIAGFLLGGAVFGAVAYIFAPQIRRSVLNEEDEYGFEKPKQPTYYDEGL 120

Query: 121 EKTRQTLNAKIGQLNSAIDNVSSRLRG-GNNTPA--VPVEADPEKEAT 156
           EKTR+TLN KIGQLNSAIDNVSSRLRG   NT +  VPVE DPE EAT
Sbjct: 121 EKTRETLNEKIGQLNSAIDNVSSRLRGREKNTSSLNVPVETDPEVEAT 167

[Close]

BLAST of MC02g1007 vs. TAIR 10
Match: AT5G16660.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02900.1); Has 106 Blast hits to 106 proteins in 32 species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 161.8 bits (408), Expect = 4.5e-40
Identity = 103/166 (62.05%), Postives = 118/166 (71.08%), Query Frame = 0


Query: 1   MAACFAPS-LSVSG----GLIKASDLS--SKSITFGQAPKLAIQKKCLRTNRKLSVRAEY 60
           MA+C A + LS+SG      +KA+ LS  +K  +  +   L I KK  RT RK SV A  
Sbjct: 1   MASCIATAPLSLSGVSQSHYVKANGLSTTTKLSSICKTSDLTIHKKSNRT-RKFSVSAGD 60

Query: 61  NDGRGGGGDFVAGFLLGGAVFGTLAYIFAPQIRRSLLN-EDEYGFRRAKRPIYYDEGLEK 120
               G  GDF+AGFLLGGAVFG +AYIFAPQIRRS+LN EDEYGF + K+P YYDEGLEK
Sbjct: 61  GSRSGSSGDFIAGFLLGGAVFGAVAYIFAPQIRRSVLNEEDEYGFEKPKQPTYYDEGLEK 120

Query: 121 TRQTLNAKIGQLNSAIDNVSSRLRG-GNNTPA--VPVEADPEKEAT 156
           TR+TLN KIGQLNSAIDNVSSRLRG   NT +  VPVE DPE EAT
Sbjct: 121 TRETLNEKIGQLNSAIDNVSSRLRGREKNTSSLNVPVETDPEVEAT 165

[Close]

BLAST of MC02g1007 vs. TAIR 10
Match: AT3G02900.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16660.1). )

HSP 1 Score: 151.4 bits (381), Expect = 6.1e-37
Identity = 83/131 (63.36%), Postives = 100/131 (76.34%), Query Frame = 0


Query: 34  LAIQKKCLRTNRKLSVRAEYNDGRGGGG--DFVAGFLLGGAVFGTLAYIFAPQIRRSLLN 93
           L +Q K  R++ KLSV A Y  G  GGG  DFV GFLLG AVFGTLAYIFAPQIRRS+L+
Sbjct: 31  LTVQTKSNRSH-KLSVSAGYRGGSKGGGSSDFVTGFLLGSAVFGTLAYIFAPQIRRSVLS 90

Query: 94  EDEYGFRRAKRPIYYDEGLEKTRQTLNAKIGQLNSAIDNVSSRLRGG-------NNTPAV 153
           E+EYGF++ ++P+YYDEGLE+ R+ LN KIGQLNSAID VSSRL+GG        ++P+V
Sbjct: 91  ENEYGFKKPEQPMYYDEGLEERREILNEKIGQLNSAIDKVSSRLKGGRSGSSKNTSSPSV 150

Query: 154 PVEADPEKEAT 156
           PVE D E EAT
Sbjct: 151 PVETDAEAEAT 160

[Close]

BLAST of MC02g1007 vs. TAIR 10
Match: AT3G02900.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16660.1); Has 80 Blast hits to 80 proteins in 21 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 150.2 bits (378), Expect = 1.4e-36
Identity = 90/164 (54.88%), Postives = 114/164 (69.51%), Query Frame = 0


Query: 1   MAACFAPSLSVSGGLIKASDLSSKSITFGQAPKLAIQKKCLRTNRKLSVRAEYNDGRGGG 60
           MA+  A  +S SG     +  +  +I   ++  L +Q K  R++ KLSV A Y  G  GG
Sbjct: 1   MASLVAAPISFSGDSHVKAHRNFNAIR--KSSTLTVQTKSNRSH-KLSVSAGYRGGSKGG 60

Query: 61  G--DFVAGFLLGGAVFGTLAYIFAPQIRRSLLNEDEYGFRRAKRPIYYDEGLEKTRQTLN 120
           G  DFV GFLLG AVFGTLAYIFAPQIRRS+L+E+EYGF++ ++P+YYDEGLE+ R+ LN
Sbjct: 61  GSSDFVTGFLLGSAVFGTLAYIFAPQIRRSVLSENEYGFKKPEQPMYYDEGLEERREILN 120

Query: 121 AKIGQLNSAIDNVSSRLRGG-------NNTPAVPVEADPEKEAT 156
            KIGQLNSAID VSSRL+GG        ++P+VPVE D E EAT
Sbjct: 121 EKIGQLNSAIDKVSSRLKGGRSGSSKNTSSPSVPVETDAEAEAT 161

[Close]

BLAST of MC02g1007 vs. TAIR 10
Match: AT1G42960.1 (expressed protein localized to the inner membrane of the chloroplast. )

HSP 1 Score: 85.5 bits (210), Expect = 4.1e-17
Identity = 55/135 (40.74%), Postives = 76/135 (56.30%), Query Frame = 0


Query: 25  SITFGQAPKLAIQKKCLRTNRKLSVRAEY--NDGRGGGGDFVAGFLLGGAVFGTLAYIFA 84
           S++FG      +     RT R L++++ Y  +DG G  G FV GF+LGG + G L  ++A
Sbjct: 34  SVSFGLNHSNKLHISAPRTKRILTIQSAYRDDDGSGSTGLFVGGFILGGLIVGALGCVYA 93

Query: 85  PQIRRSLLNEDEYGFRRAKRPIYYDE--GLEKTRQTLNAKIGQLNSAIDNVSSRLRGGNN 144
           PQI +++   D     R      YDE   LEKTR+ L  KI QLNSAID+VSS+L+   +
Sbjct: 94  PQISKAIAGADRKDLMRKLPKFIYDEEKALEKTRKVLAEKIAQLNSAIDDVSSQLK-SED 153

Query: 145 TPAVPVEADPEKEAT 156
           TP     +  E EAT
Sbjct: 154 TPNGAALSTDEIEAT 167

The following BLAST results are available for this feature:

BLAST of MC02g1007 vs.


Match Name	E-value	Identity	Description

BLAST of MC02g1007 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148671.1	3.00e-104	100.00	uncharacterized protein LOC111017273 [Momordica charantia]	[more]
XP_038902580.1	3.08e-95	94.27	uncharacterized protein LOC120089235 [Benincasa hispida]	[more]
KAG7010970.1	1.47e-93	91.08	hypothetical protein SDJN02_27768, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023512433.1	2.08e-93	91.08	uncharacterized protein LOC111777191 [Cucurbita pepo subsp. pepo]	[more]
XP_022944447.1	2.96e-93	91.08	uncharacterized protein LOC111448897 [Cucurbita moschata]	[more]

BLAST of MC02g1007 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D647	1.45e-104	100.00	uncharacterized protein LOC111017273 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1FVP6	1.43e-93	91.08	uncharacterized protein LOC111448897 OS=Cucurbita moschata OX=3662 GN=LOC1114488...	[more]
A0A6J1JGK4	8.29e-93	90.45	uncharacterized protein LOC111484314 OS=Cucurbita maxima OX=3661 GN=LOC111484314...	[more]
A0A5D3CQ66	8.22e-91	88.61	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C9M4	8.22e-91	88.61	uncharacterized protein LOC103498395 OS=Cucumis melo OX=3656 GN=LOC103498395 PE=...	[more]

BLAST of MC02g1007 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16660.1	2.4e-41	63.10	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G16660.2	4.5e-40	62.05	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G02900.2	6.1e-37	63.36	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G02900.1	1.4e-36	54.88	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G42960.1	4.1e-17	40.74	expressed protein localized to the inner membrane of the chloroplast.	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..156
None	No IPR available	PANTHER	PTHR34048:SF3	LOW-DENSITY RECEPTOR-LIKE PROTEIN	coord: 1..156
None	No IPR available	PANTHER	PTHR34048	LOW-DENSITY RECEPTOR-LIKE PROTEIN	coord: 1..156

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g1007.1	MC02g1007.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane