MC02g0958 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g0958
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	mediator of RNA polymerase II transcription subunit 32
Location	MC02: 7665251 .. 7666205 (+)
RNA-Seq Expression	MC02g0958
Synteny	MC02g0958

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAGCTTAGTGGACTCTTTAAATAACGCGTACCAGGAGTTTGTTGCTGGGGCAGCCAATGTTCTTGAAGCCAACGAAAGCTCTGGGGCTCAGAAGACAGCAGCAACAGATGCCGCTCTTGAGAATTTTAAACAGAAATGGGAGCTATTCAGGGTTGCCTGTGACCAAGCAGAGGAGTTTGTGGAGTCCGTGAAGCAGAGGATAGGATCAGAGTGCCTGGTGGATGAGGCCACTGGTTCACTGACTGGCAAGTCTGGGCAGCCTGCCGCTGCCACCGGTCTTCCACCGATCAGTGCCGTTCGGCTGGAACAGATGAGCAAAGCTGTGAGATGGCTTGTGATTGAACTGCAGCAGGGCTCAGGAGCTGCTGCTTCTGCTTCAGCACATTCTCACCCTTCTGCCCCTTTTGATGCTAGATTTACCGAGGATGCAGCCCAATAGGTACCTATCTTATAAGGCAAATGGAACAAGTATTCTGTTTTGCATGAAAAATGACTCACGGGGTGGGGCATTTGCTGTGCAAAATAATTGTCTTCAAACCTTGATTGAATGGAAGAAATGGAAACCATTTCTCCTGTATCTATAGTTAACTAATATACTTTCACGTTCTTGTACTTGTTTGAGTTGTTTTTGTTAAGGGTTGGGTGCAAGTGAAATAGTCTCTAATATATATATTTCTTCTCTTCTCCCACAATATATTATAGGACTAGCTGAAATTTCATTGATCGTCGTTGCTCGAAACATTGAGAATATGTTAAACGATGAAAGTTATCATAAGTTTGTGGATTCATTAGTGTTGTAAAATCTAACCTGTGTTTCTTTACCGGTCATTCTCTTTCTATTTTTTATATATGCCAAATTCAAGCCATAACATTGGTTTCTCATAGAACTCGGATAATGTGGGTCAATGAAAAAAAGGTTAAAAGGGTTGGAGGAATGAGTTCAAGCTTGG

mRNA sequence

ATGGACAGCTTAGTGGACTCTTTAAATAACGCGTACCAGGAGTTTGTTGCTGGGGCAGCCAATGTTCTTGAAGCCAACGAAAGCTCTGGGGCTCAGAAGACAGCAGCAACAGATGCCGCTCTTGAGAATTTTAAACAGAAATGGGAGCTATTCAGGGTTGCCTGTGACCAAGCAGAGGAGTTTGTGGAGTCCGTGAAGCAGAGGATAGGATCAGAGTGCCTGGTGGATGAGGCCACTGGTTCACTGACTGGCAAGTCTGGGCAGCCTGCCGCTGCCACCGGTCTTCCACCGATCAGTGCCGTTCGGCTGGAACAGATGAGCAAAGCTGTGAGATGGCTTGTGATTGAACTGCAGCAGGGCTCAGGAGCTGCTGCTTCTGCTTCAGCACATTCTCACCCTTCTGCCCCTTTTGATGCTAGATTTACCGAGGATGCAGCCCAATAGGTACCTATCTTATAAGGCAAATGGAACAAGTATTCTGTTTTGCATGAAAAATGACTCACGGGGTGGGGCATTTGCTGTGCAAAATAATTGTCTTCAAACCTTGATTGAATGGAAGAAATGGAAACCATTTCTCCTGTATCTATAGTTAACTAATATACTTTCACGTTCTTGTACTTGTTTGAGTTGTTTTTGTTAAGGGTTGGGTGCAAGTGAAATAGTCTCTAATATATATATTTCTTCTCTTCTCCCACAATATATTATAGGACTAGCTGAAATTTCATTGATCGTCGTTGCTCGAAACATTGAGAATATGTTAAACGATGAAAGTTATCATAAGTTTGTGGATTCATTAGTGTTGTAAAATCTAACCTGTGTTTCTTTACCGGTCATTCTCTTTCTATTTTTTATATATGCCAAATTCAAGCCATAACATTGGTTTCTCATAGAACTCGGATAATGTGGGTCAATGAAAAAAAGGTTAAAAGGGTTGGAGGAATGAGTTCAAGCTTGG

Coding sequence (CDS)

ATGGACAGCTTAGTGGACTCTTTAAATAACGCGTACCAGGAGTTTGTTGCTGGGGCAGCCAATGTTCTTGAAGCCAACGAAAGCTCTGGGGCTCAGAAGACAGCAGCAACAGATGCCGCTCTTGAGAATTTTAAACAGAAATGGGAGCTATTCAGGGTTGCCTGTGACCAAGCAGAGGAGTTTGTGGAGTCCGTGAAGCAGAGGATAGGATCAGAGTGCCTGGTGGATGAGGCCACTGGTTCACTGACTGGCAAGTCTGGGCAGCCTGCCGCTGCCACCGGTCTTCCACCGATCAGTGCCGTTCGGCTGGAACAGATGAGCAAAGCTGTGAGATGGCTTGTGATTGAACTGCAGCAGGGCTCAGGAGCTGCTGCTTCTGCTTCAGCACATTCTCACCCTTCTGCCCCTTTTGATGCTAGATTTACCGAGGATGCAGCCCAATAG

Protein sequence

MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEEFVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISAVRLEQMSKAVRWLVIELQQGSGAAASASAHSHPSAPFDARFTEDAAQ

Homology

[Close]

BLAST of MC02g0958 vs. ExPASy Swiss-Prot
Match: Q84VW5 (Mediator of RNA polymerase II transcription subunit 32 OS=Arabidopsis thaliana OX=3702 GN=MED32 PE=1 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 3.0e-46
Identity = 105/153 (68.63%), Postives = 120/153 (78.43%), Query Frame = 0


Query: 1   MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEE 60
           MD++VDSLN AY++FV  +A VLE+ ES+G QK   TD ALENFK+KWELFRVACDQAEE
Sbjct: 1   MDNIVDSLNKAYEKFVLASAGVLESKESAGGQKALLTDTALENFKEKWELFRVACDQAEE 60

Query: 61  FVESVKQRIGSECLVDEATGSLTGKSGQPA------AATGLPPISAVRLEQMSKAVRWLV 120
           FVESVKQRIGSECLVDEATG  T  +G  A      AAT LPPISAVRLEQMS+AVRWLV
Sbjct: 61  FVESVKQRIGSECLVDEATGLTTTAAGGQAPAAVTGAATSLPPISAVRLEQMSRAVRWLV 120

Query: 121 IELQQGSGAAASASAHSHPSAPFDARFTEDAAQ 148
           +ELQ+GSG  A  S HS  S  FD+RF+ED+ Q
Sbjct: 121 LELQRGSG-VAPGSVHS-SSTGFDSRFSEDSTQ 151

[Close]

BLAST of MC02g0958 vs. NCBI nr
Match: XP_022148505.1 (mediator of RNA polymerase II transcription subunit 32 [Momordica charantia] >XP_022148506.1 mediator of RNA polymerase II transcription subunit 32 [Momordica charantia])

HSP 1 Score: 278 bits (710), Expect = 7.22e-94
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEE 60
           MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEE
Sbjct: 1   MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEE 60

Query: 61  FVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISAVRLEQMSKAVRWLVIELQQG 120
           FVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISAVRLEQMSKAVRWLVIELQQG
Sbjct: 61  FVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISAVRLEQMSKAVRWLVIELQQG 120

Query: 121 SGAAASASAHSHPSAPFDARFTEDAAQ 147
           SGAAASASAHSHPSAPFDARFTEDAAQ
Sbjct: 121 SGAAASASAHSHPSAPFDARFTEDAAQ 147

[Close]

BLAST of MC02g0958 vs. NCBI nr
Match: XP_038902813.1 (mediator of RNA polymerase II transcription subunit 32 [Benincasa hispida] >XP_038902814.1 mediator of RNA polymerase II transcription subunit 32 [Benincasa hispida])

HSP 1 Score: 258 bits (660), Expect = 2.94e-86
Identity = 139/147 (94.56%), Postives = 141/147 (95.92%), Query Frame = 0


Query: 1   MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEE 60
           MDSLVDSLNNAYQEFVAGAANVLEANE+SGAQKTAATDAALENFKQKWELFRVACDQAEE
Sbjct: 1   MDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE 60

Query: 61  FVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISAVRLEQMSKAVRWLVIELQQG 120
           FVESVKQRIGSECLVDEATGSL GKSGQ AA TG+PPISAVRLEQMSKAVRWLVIELQ G
Sbjct: 61  FVESVKQRIGSECLVDEATGSLAGKSGQ-AATTGIPPISAVRLEQMSKAVRWLVIELQHG 120

Query: 121 SGAAASASAHSHPSAPFDARFTEDAAQ 147
           SGAAASASAHSH SAPFDARFTEDA Q
Sbjct: 121 SGAAASASAHSHQSAPFDARFTEDATQ 146

[Close]

BLAST of MC02g0958 vs. NCBI nr
Match: KAA0045925.1 (mediator of RNA polymerase II transcription subunit 32 [Cucumis melo var. makuwa])

HSP 1 Score: 256 bits (655), Expect = 1.95e-85
Identity = 138/147 (93.88%), Postives = 140/147 (95.24%), Query Frame = 0


Query: 1   MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEE 60
           MDSLVDSLNNAYQEFVAGAANVLEANE+SGAQKTAATDAALENFKQKWELFRVACDQAEE
Sbjct: 5   MDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE 64

Query: 61  FVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISAVRLEQMSKAVRWLVIELQQG 120
           FVESVKQRIGSECLVDEATGSL GKSGQ +  TGLPPISAVRLEQMSKAVRWLVIELQ G
Sbjct: 65  FVESVKQRIGSECLVDEATGSLAGKSGQ-SGTTGLPPISAVRLEQMSKAVRWLVIELQHG 124

Query: 121 SGAAASASAHSHPSAPFDARFTEDAAQ 147
           SGAAASASAHSH SAPFDARFTEDA Q
Sbjct: 125 SGAAASASAHSHQSAPFDARFTEDATQ 150

[Close]

BLAST of MC02g0958 vs. NCBI nr
Match: XP_004148855.1 (mediator of RNA polymerase II transcription subunit 32 [Cucumis sativus] >XP_031736355.1 mediator of RNA polymerase II transcription subunit 32 [Cucumis sativus] >KGN61780.1 hypothetical protein Csa_006151 [Cucumis sativus])

HSP 1 Score: 256 bits (653), Expect = 3.43e-85
Identity = 138/147 (93.88%), Postives = 140/147 (95.24%), Query Frame = 0


Query: 1   MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEE 60
           MDSLVDSLNNAYQEFVAGAANVLEANE+SGAQKTAATDAALENFKQKWELFRVACDQAEE
Sbjct: 1   MDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE 60

Query: 61  FVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISAVRLEQMSKAVRWLVIELQQG 120
           FVESVKQRIGSECLVDEATGSL GKSGQ +A T LPPISAVRLEQMSKAVRWLVIELQ G
Sbjct: 61  FVESVKQRIGSECLVDEATGSLAGKSGQ-SATTSLPPISAVRLEQMSKAVRWLVIELQHG 120

Query: 121 SGAAASASAHSHPSAPFDARFTEDAAQ 147
           SGAAASASAHSH SAPFDARFTEDA Q
Sbjct: 121 SGAAASASAHSHQSAPFDARFTEDATQ 146

[Close]

BLAST of MC02g0958 vs. NCBI nr
Match: XP_022986622.1 (mediator of RNA polymerase II transcription subunit 32-like isoform X2 [Cucurbita maxima] >XP_022986623.1 mediator of RNA polymerase II transcription subunit 32-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 256 bits (653), Expect = 3.80e-85
Identity = 139/149 (93.29%), Postives = 142/149 (95.30%), Query Frame = 0


Query: 1   MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEE 60
           MDSLVDSLNNAYQEFV+GAANVLEANE+SGAQKTAATDAALENFKQKWELFRVACDQAEE
Sbjct: 1   MDSLVDSLNNAYQEFVSGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE 60

Query: 61  FVESVKQRIGSECLVDEATGSLTGKSGQPAAAT-GLPPISAVRLEQMSKAVRWLVIELQQ 120
           FVESVKQRIGSECLVDEATGSL GKSGQ AA T GLPPISA+RLEQMSKAVRWLVIELQ 
Sbjct: 61  FVESVKQRIGSECLVDEATGSLAGKSGQAAATTTGLPPISAIRLEQMSKAVRWLVIELQH 120

Query: 121 GSGAAA-SASAHSHPSAPFDARFTEDAAQ 147
           GSGAAA SASAHSHPSAPFDARFTEDA Q
Sbjct: 121 GSGAAAASASAHSHPSAPFDARFTEDATQ 149

[Close]

BLAST of MC02g0958 vs. ExPASy TrEMBL
Match: A0A6J1D330 (mediator of RNA polymerase II transcription subunit 32 OS=Momordica charantia OX=3673 GN=LOC111017137 PE=4 SV=1)

HSP 1 Score: 278 bits (710), Expect = 3.50e-94
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEE 60
           MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEE
Sbjct: 1   MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEE 60

Query: 61  FVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISAVRLEQMSKAVRWLVIELQQG 120
           FVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISAVRLEQMSKAVRWLVIELQQG
Sbjct: 61  FVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISAVRLEQMSKAVRWLVIELQQG 120

Query: 121 SGAAASASAHSHPSAPFDARFTEDAAQ 147
           SGAAASASAHSHPSAPFDARFTEDAAQ
Sbjct: 121 SGAAASASAHSHPSAPFDARFTEDAAQ 147

[Close]

BLAST of MC02g0958 vs. ExPASy TrEMBL
Match: A0A5A7TWZ7 (Mediator of RNA polymerase II transcription subunit 32 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G004640 PE=4 SV=1)

HSP 1 Score: 256 bits (655), Expect = 9.42e-86
Identity = 138/147 (93.88%), Postives = 140/147 (95.24%), Query Frame = 0


Query: 1   MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEE 60
           MDSLVDSLNNAYQEFVAGAANVLEANE+SGAQKTAATDAALENFKQKWELFRVACDQAEE
Sbjct: 5   MDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE 64

Query: 61  FVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISAVRLEQMSKAVRWLVIELQQG 120
           FVESVKQRIGSECLVDEATGSL GKSGQ +  TGLPPISAVRLEQMSKAVRWLVIELQ G
Sbjct: 65  FVESVKQRIGSECLVDEATGSLAGKSGQ-SGTTGLPPISAVRLEQMSKAVRWLVIELQHG 124

Query: 121 SGAAASASAHSHPSAPFDARFTEDAAQ 147
           SGAAASASAHSH SAPFDARFTEDA Q
Sbjct: 125 SGAAASASAHSHQSAPFDARFTEDATQ 150

[Close]

BLAST of MC02g0958 vs. ExPASy TrEMBL
Match: A0A0A0LIN7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G245440 PE=4 SV=1)

HSP 1 Score: 256 bits (653), Expect = 1.66e-85
Identity = 138/147 (93.88%), Postives = 140/147 (95.24%), Query Frame = 0


Query: 1   MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEE 60
           MDSLVDSLNNAYQEFVAGAANVLEANE+SGAQKTAATDAALENFKQKWELFRVACDQAEE
Sbjct: 1   MDSLVDSLNNAYQEFVAGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE 60

Query: 61  FVESVKQRIGSECLVDEATGSLTGKSGQPAAATGLPPISAVRLEQMSKAVRWLVIELQQG 120
           FVESVKQRIGSECLVDEATGSL GKSGQ +A T LPPISAVRLEQMSKAVRWLVIELQ G
Sbjct: 61  FVESVKQRIGSECLVDEATGSLAGKSGQ-SATTSLPPISAVRLEQMSKAVRWLVIELQHG 120

Query: 121 SGAAASASAHSHPSAPFDARFTEDAAQ 147
           SGAAASASAHSH SAPFDARFTEDA Q
Sbjct: 121 SGAAASASAHSHQSAPFDARFTEDATQ 146

[Close]

BLAST of MC02g0958 vs. ExPASy TrEMBL
Match: A0A6J1JH28 (mediator of RNA polymerase II transcription subunit 32-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484308 PE=4 SV=1)

HSP 1 Score: 256 bits (653), Expect = 1.84e-85
Identity = 139/149 (93.29%), Postives = 142/149 (95.30%), Query Frame = 0


Query: 1   MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEE 60
           MDSLVDSLNNAYQEFV+GAANVLEANE+SGAQKTAATDAALENFKQKWELFRVACDQAEE
Sbjct: 1   MDSLVDSLNNAYQEFVSGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE 60

Query: 61  FVESVKQRIGSECLVDEATGSLTGKSGQPAAAT-GLPPISAVRLEQMSKAVRWLVIELQQ 120
           FVESVKQRIGSECLVDEATGSL GKSGQ AA T GLPPISA+RLEQMSKAVRWLVIELQ 
Sbjct: 61  FVESVKQRIGSECLVDEATGSLAGKSGQAAATTTGLPPISAIRLEQMSKAVRWLVIELQH 120

Query: 121 GSGAAA-SASAHSHPSAPFDARFTEDAAQ 147
           GSGAAA SASAHSHPSAPFDARFTEDA Q
Sbjct: 121 GSGAAAASASAHSHPSAPFDARFTEDATQ 149

[Close]

BLAST of MC02g0958 vs. ExPASy TrEMBL
Match: A0A6J1FUB1 (mediator of RNA polymerase II transcription subunit 32-like OS=Cucurbita moschata OX=3662 GN=LOC111448854 PE=4 SV=1)

HSP 1 Score: 255 bits (652), Expect = 2.79e-85
Identity = 140/151 (92.72%), Postives = 142/151 (94.04%), Query Frame = 0


Query: 1   MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEE 60
           MDSLVDSLNNAYQEFV+GAANVLEANE+SGAQKTAATDAALENFKQKWELFRVACDQAEE
Sbjct: 1   MDSLVDSLNNAYQEFVSGAANVLEANEASGAQKTAATDAALENFKQKWELFRVACDQAEE 60

Query: 61  FVESVKQRIGSECLVDEATGSLTGKSGQPAAAT-GLPPISAVRLEQMSKAVRWLVIELQQ 120
           FVESVKQRIGSECLVDEATGSL GKSGQ AA T GLPPISAVRLEQMSKAVRWLVIELQ 
Sbjct: 61  FVESVKQRIGSECLVDEATGSLAGKSGQAAATTTGLPPISAVRLEQMSKAVRWLVIELQH 120

Query: 121 GSGAAA---SASAHSHPSAPFDARFTEDAAQ 147
           GSGAAA   SASAHSHPSAPFDARFTEDA Q
Sbjct: 121 GSGAAAAAASASAHSHPSAPFDARFTEDATQ 151

[Close]

BLAST of MC02g0958 vs. TAIR 10
Match: AT1G11760.1 (MED32; Has 41 Blast hits to 40 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 186.0 bits (471), Expect = 2.1e-47
Identity = 105/153 (68.63%), Postives = 120/153 (78.43%), Query Frame = 0


Query: 1   MDSLVDSLNNAYQEFVAGAANVLEANESSGAQKTAATDAALENFKQKWELFRVACDQAEE 60
           MD++VDSLN AY++FV  +A VLE+ ES+G QK   TD ALENFK+KWELFRVACDQAEE
Sbjct: 1   MDNIVDSLNKAYEKFVLASAGVLESKESAGGQKALLTDTALENFKEKWELFRVACDQAEE 60

Query: 61  FVESVKQRIGSECLVDEATGSLTGKSGQPA------AATGLPPISAVRLEQMSKAVRWLV 120
           FVESVKQRIGSECLVDEATG  T  +G  A      AAT LPPISAVRLEQMS+AVRWLV
Sbjct: 61  FVESVKQRIGSECLVDEATGLTTTAAGGQAPAAVTGAATSLPPISAVRLEQMSRAVRWLV 120

Query: 121 IELQQGSGAAASASAHSHPSAPFDARFTEDAAQ 148
           +ELQ+GSG  A  S HS  S  FD+RF+ED+ Q
Sbjct: 121 LELQRGSG-VAPGSVHS-SSTGFDSRFSEDSTQ 151

The following BLAST results are available for this feature:

BLAST of MC02g0958 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84VW5	3.0e-46	68.63	Mediator of RNA polymerase II transcription subunit 32 OS=Arabidopsis thaliana O...	[more]

BLAST of MC02g0958 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148505.1	7.22e-94	100.00	mediator of RNA polymerase II transcription subunit 32 [Momordica charantia] >XP...	[more]
XP_038902813.1	2.94e-86	94.56	mediator of RNA polymerase II transcription subunit 32 [Benincasa hispida] >XP_0...	[more]
KAA0045925.1	1.95e-85	93.88	mediator of RNA polymerase II transcription subunit 32 [Cucumis melo var. makuwa...	[more]
XP_004148855.1	3.43e-85	93.88	mediator of RNA polymerase II transcription subunit 32 [Cucumis sativus] >XP_031...	[more]
XP_022986622.1	3.80e-85	93.29	mediator of RNA polymerase II transcription subunit 32-like isoform X2 [Cucurbit...	[more]

BLAST of MC02g0958 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D330	3.50e-94	100.00	mediator of RNA polymerase II transcription subunit 32 OS=Momordica charantia OX...	[more]
A0A5A7TWZ7	9.42e-86	93.88	Mediator of RNA polymerase II transcription subunit 32 OS=Cucumis melo var. maku...	[more]
A0A0A0LIN7	1.66e-85	93.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G245440 PE=4 SV=1	[more]
A0A6J1JH28	1.84e-85	93.29	mediator of RNA polymerase II transcription subunit 32-like isoform X2 OS=Cucurb...	[more]
A0A6J1FUB1	2.79e-85	92.72	mediator of RNA polymerase II transcription subunit 32-like OS=Cucurbita moschat...	[more]

BLAST of MC02g0958 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11760.1	2.1e-47	68.63	MED32; Has 41 Blast hits to 40 proteins in 14 species: Archae - 0; Bacteria - 0;...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..147
None	No IPR available	PANTHER	PTHR35989:SF1	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 32	coord: 1..147
IPR033244	Mediator of RNA polymerase II transcription subunit 32	PANTHER	PTHR35989	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 32	coord: 1..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g0958.1	MC02g0958.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009631	cold acclimation
biological_process	GO:0010150	leaf senescence
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0048364	root development
cellular_component	GO:0016592	mediator complex