MC02g0832 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC02g0832
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description40S ribosomal protein S23
LocationMC02: 6611702 .. 6613365 (-)
RNA-Seq ExpressionMC02g0832
SyntenyMC02g0832
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSutr3
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATCTTACAGGAAGACACGTGGAATGGGAGCTGGTCGCAAGTTGAAGTCCCACCGTAGAAGGCAAAGGTGGGCTGACAAAGCATACAAGAAATCCCATCTTGGAAACGAGTGGAAGAAGCCATTTGCTGGATCGTCACATGCAAAAGGCATCGTCCTAGAAAAGATGTAAGATGATTTTAGTAGTGCATTTTTTAGGCTTATTAGCTAAAACTAATTTTAAGTTTTAACAAGTAATTCTCTGGTGTAACGTGCAGTGGTATTGAGGCTAAGCAGCCTAACTCTGCTATTAGGAAGTGTGCTAGAGTTCAACTTATTAAGAACGGGAAGAAGATCGCGGCCTTTGTCCCAAATGATGGTTGTTTGAACTACATTGAAGAGAATGTAAGTATTTGCGGGAGTGGGTTGCGACCACTGAGATTTTGGCTACTATTACCTGCTCTCTGTTATTTGTTCAACTTTTGCAATAATATTCATGGTCGTGTACAGGACGAGGTTCTCATTGCTGGATTTGGCCGAAAAGGACATGCTGTTGGTGATATTCCCGGAGTCAGATTTAAGGTGGTGAAGGTGTCAGGTGTATCTCTTCTGGCTCTCTTTAAGGAAAAGAAGGAGAAGCCAAGGTCTTAAGCTTCTCGGTTTTTCAAGATAGATTTTGTCTTCATTTCTTCGTTTCTTGCAATATGCAATTAATTAGATTACTCGGTTGTCTGATAGATACTCTTGCGCTGCAATCCTGTTGTTGAGATGTCGCGATTCAAACATAATTTTATTTGCAATCAGAACAGATTCTGTTATGATTAATTTGAGTGGGACACCGCCCCTTCTCTTCCCCCATCAAAATGCCAGGAAGTTTGGTCTTGAAATGATTCTGCTTTATTGCAGTGAATGTGAATGTCCAGCTTTTTTTTCACTTCCATGTTCAATTCTGGGAGAATGATGGATCTTAAAAACTATGCTGTTGATCCTTTCTTTAGTTCCATGAGTTGGATTACTTGGGGGCTGCATTGTGGATGCCCAAGTAATTTTTACAGGCTTGGATTCCACTTGTTTTCTTGATCCACGAGGTACACAAACATTATTCTCTCTCCAAATATGATTCATTTTAATCATATTGGTGTAAGAGTTTGATTTCCTCATTCAGCATGGTTTAAATTCTGAAACCATCCCTTTCAAGATCTCCATTCTTAGTGCATTATTAATCAAGTGCTTCTACAGGAAACACTATTCAGTTGGAACATGAAAGCACCTCAGAAATTGGAAATTATGTTTCTTGAAAGCTGTGATATGGGTAGCTGTATTATTTATGCAGATTGGCCCCAAAAAGTAAGGATGCCCAATTAGGTTCTGTGAGATGGGACGTTCTTTTGTTAGGAACAAGGTGAATTGTCAACATCATGTTTGCTTAAAACGCAGCAAGGAGATGAGTTTTGGTTTGCAAAAACAGAATCCAAAGAAAGCAGGAGCCTCAAGAGAGAGAACTCGATTTTGGTATCAATCATATAAATTCAAATCCCAAGATCTTCCTCTTTTGACTGACTGGCCCCTTCTCTAATGACCCAACCAATTTGGTTTTAGCCCTTTTTTCGCCCATTCTTCCATGGACAAGAAGTTTGGTTGCCAACCCTACTCATTTAGGAATTAGGATGAAGAAAATTGAAGGGT

mRNA sequence

ATATCTTACAGGAAGACACGTGGAATGGGAGCTGGTCGCAAGTTGAAGTCCCACCGTAGAAGGCAAAGGTGGGCTGACAAAGCATACAAGAAATCCCATCTTGGAAACGAGTGGAAGAAGCCATTTGCTGGATCGTCACATGCAAAAGGCATCGTCCTAGAAAAGATTGGTATTGAGGCTAAGCAGCCTAACTCTGCTATTAGGAAGTGTGCTAGAGTTCAACTTATTAAGAACGGGAAGAAGATCGCGGCCTTTGTCCCAAATGATGGTTGTTTGAACTACATTGAAGAGAATGACGAGGTTCTCATTGCTGGATTTGGCCGAAAAGGACATGCTGTTGGTGATATTCCCGGAGTCAGATTTAAGGTGGTGAAGGTGTCAGGTGTATCTCTTCTGGCTCTCTTTAAGGAAAAGAAGGAGAAGCCAAGGTCTTAAGCTTCTCGGTTTTTCAAGATAGATTTTGTCTTCATTTCTTCGTTTCTTGCAATATGCAATTAATTAGATTACTCGGTTGTCTGATAGATACTCTTGCGCTGCAATCCTGTTGTTGAGATGTCGCGATTCAAACATAATTTTATTTGCAATCAGAACAGATTCTGTTATGATTAATTTGAGTGGGACACCGCCCCTTCTCTTCCCCCATCAAAATGCCAGGAAGTTTGGTCTTGAAATGATTCTGCTTTATTGCAGTGAATGTGAATGTCCAGCTTTTTTTTCACTTCCATGTTCAATTCTGGGAGAATGATGGATCTTAAAAACTATGCTGTTGATCCTTTCTTTAGTTCCATGAGTTGGATTACTTGGGGGCTGCATTGTGGATGCCCAAGTAATTTTTACAGGCTTGGATTCCACTTGTTTTCTTGATCCACGAGGAAACACTATTCAGTTGGAACATGAAAGCACCTCAGAAATTGGAAATTATGTTTCTTGAAAGCTGTGATATGGGTAGCTGTATTATTTATGCAGATTGGCCCCAAAAAGTAAGGATGCCCAATTAGGTTCTGTGAGATGGGACGTTCTTTTGTTAGGAACAAGGTGAATTGTCAACATCATGTTTGCTTAAAACGCAGCAAGGAGATGAGTTTTGGTTTGCAAAAACAGAATCCAAAGAAAGCAGGAGCCTCAAGAGAGAGAACTCGATTTTGGTATCAATCATATAAATTCAAATCCCAAGATCTTCCTCTTTTGACTGACTGGCCCCTTCTCTAATGACCCAACCAATTTGGTTTTAGCCCTTTTTTCGCCCATTCTTCCATGGACAAGAAGTTTGGTTGCCAACCCTACTCATTTAGGAATTAGGATGAAGAAAATTGAAGGGT

Coding sequence (CDS)

ATATCTTACAGGAAGACACGTGGAATGGGAGCTGGTCGCAAGTTGAAGTCCCACCGTAGAAGGCAAAGGTGGGCTGACAAAGCATACAAGAAATCCCATCTTGGAAACGAGTGGAAGAAGCCATTTGCTGGATCGTCACATGCAAAAGGCATCGTCCTAGAAAAGATTGGTATTGAGGCTAAGCAGCCTAACTCTGCTATTAGGAAGTGTGCTAGAGTTCAACTTATTAAGAACGGGAAGAAGATCGCGGCCTTTGTCCCAAATGATGGTTGTTTGAACTACATTGAAGAGAATGACGAGGTTCTCATTGCTGGATTTGGCCGAAAAGGACATGCTGTTGGTGATATTCCCGGAGTCAGATTTAAGGTGGTGAAGGTGTCAGGTGTATCTCTTCTGGCTCTCTTTAAGGAAAAGAAGGAGAAGCCAAGGTCTTAA

Protein sequence

ISYRKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS
Homology
[Close]
BLAST of MC02g0832 vs. ExPASy Swiss-Prot
Match: P46297 (40S ribosomal protein S23 OS=Fragaria ananassa OX=3747 GN=RPS23 PE=2 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 3.7e-73
Identity = 137/140 (97.86%), Postives = 139/140 (99.29%), Query Frame = 0 

Query: 5   KTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPN 64
           KTRGMGA RKLK+HRRRQRWADK+YKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPN
Sbjct: 3   KTRGMGAARKLKNHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPN 62

Query: 65  SAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVV 124
           SAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVV
Sbjct: 63  SAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVV 122

Query: 125 KVSGVSLLALFKEKKEKPRS 145
           KVSGVSLLALFKEKKEKPRS
Sbjct: 123 KVSGVSLLALFKEKKEKPRS 142

[Close]
BLAST of MC02g0832 vs. ExPASy Swiss-Prot
Match: Q9M5Z9 (40S ribosomal protein S23 OS=Euphorbia esula OX=3993 GN=RPS23 PE=2 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 3.1e-72
Identity = 136/140 (97.14%), Postives = 137/140 (97.86%), Query Frame = 0 

Query: 5   KTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPN 64
           KT GMGA RKLKSHRR QRWADK+YKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPN
Sbjct: 3   KTHGMGAARKLKSHRRTQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPN 62

Query: 65  SAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVV 124
           SAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVV
Sbjct: 63  SAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVV 122

Query: 125 KVSGVSLLALFKEKKEKPRS 145
           KVSGVSLLALFKEKKEKPRS
Sbjct: 123 KVSGVSLLALFKEKKEKPRS 142

[Close]
BLAST of MC02g0832 vs. ExPASy Swiss-Prot
Match: P49201 (40S ribosomal protein S23-2 OS=Arabidopsis thaliana OX=3702 GN=RPS23B PE=2 SV=2)

HSP 1 Score: 266.9 bits (681), Expect = 1.3e-70
Identity = 135/140 (96.43%), Postives = 135/140 (96.43%), Query Frame = 0 

Query: 5   KTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPN 64
           KTRGMGAGRKLK  R  QRWADK YKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPN
Sbjct: 3   KTRGMGAGRKLKRLRINQRWADKQYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPN 62

Query: 65  SAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVV 124
           SAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVV
Sbjct: 63  SAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVV 122

Query: 125 KVSGVSLLALFKEKKEKPRS 145
           KVSGVSLLALFKEKKEKPRS
Sbjct: 123 KVSGVSLLALFKEKKEKPRS 142

[Close]
BLAST of MC02g0832 vs. ExPASy Swiss-Prot
Match: Q9SF35 (40S ribosomal protein S23-1 OS=Arabidopsis thaliana OX=3702 GN=RPS23A PE=2 SV=2)

HSP 1 Score: 258.1 bits (658), Expect = 6.0e-68
Identity = 132/140 (94.29%), Postives = 133/140 (95.00%), Query Frame = 0 

Query: 5   KTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPN 64
           KTRGMGAGRKLK  R  QRWADK YKKS+ GNEWKKPFA SSHAKGIVLEKIGIEAKQPN
Sbjct: 3   KTRGMGAGRKLKQLRITQRWADKHYKKSNRGNEWKKPFACSSHAKGIVLEKIGIEAKQPN 62

Query: 65  SAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVV 124
           SAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVV
Sbjct: 63  SAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVV 122

Query: 125 KVSGVSLLALFKEKKEKPRS 145
           KVSGVSLLALFKEKKEKPRS
Sbjct: 123 KVSGVSLLALFKEKKEKPRS 142

[Close]
BLAST of MC02g0832 vs. ExPASy Swiss-Prot
Match: Q9GRJ3 (40S ribosomal protein S23 OS=Lumbricus rubellus OX=35632 GN=RPS23 PE=2 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.6e-60
Identity = 114/141 (80.85%), Postives = 125/141 (88.65%), Query Frame = 0 

Query: 5   KTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQP 64
           K RG+   RKLK+HRR QRW DK YKKSHLG  WK  PF G+SHAKGIVLEK+G+EAKQP
Sbjct: 3   KPRGLRTARKLKNHRREQRWHDKDYKKSHLGTRWKSNPFGGASHAKGIVLEKVGVEAKQP 62

Query: 65  NSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKV 124
           NSAIRKC RVQLIKNGKKI AFVP DGCLN+IEENDEVL+AGFGRKGHAVGDIPGVRFKV
Sbjct: 63  NSAIRKCVRVQLIKNGKKITAFVPRDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKV 122

Query: 125 VKVSGVSLLALFKEKKEKPRS 145
           VKV+ VSLLAL+K+KKE+PRS
Sbjct: 123 VKVASVSLLALYKQKKERPRS 143

[Close]
BLAST of MC02g0832 vs. NCBI nr
Match: XP_026418399.1 (40S ribosomal protein S23 isoform X1 [Papaver somniferum] >XP_026424064.1 40S ribosomal protein S23 isoform X1 [Papaver somniferum] >RZC83759.1 hypothetical protein C5167_046546 [Papaver somniferum])

HSP 1 Score: 282 bits (721), Expect = 1.21e-95
Identity = 141/144 (97.92%), Postives = 143/144 (99.31%), Query Frame = 0 

Query: 1   ISYRKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEA 60
           + YRKTRGMGAGRKLKSHRRRQRWADK+YKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEA
Sbjct: 1   MGYRKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEA 60

Query: 61  KQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVR 120
           KQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVR
Sbjct: 61  KQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVR 120

Query: 121 FKVVKVSGVSLLALFKEKKEKPRS 144
           FKVVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 FKVVKVSGVSLLALFKEKKEKPRS 144

[Close]
BLAST of MC02g0832 vs. NCBI nr
Match: TYK05731.1 (40S ribosomal protein S23 [Cucumis melo var. makuwa])

HSP 1 Score: 281 bits (719), Expect = 2.45e-95
Identity = 142/144 (98.61%), Postives = 143/144 (99.31%), Query Frame = 0 

Query: 1   ISYRKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEA 60
           +S RKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEA
Sbjct: 1   MSCRKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEA 60

Query: 61  KQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVR 120
           KQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVR
Sbjct: 61  KQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVR 120

Query: 121 FKVVKVSGVSLLALFKEKKEKPRS 144
           FKVVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 FKVVKVSGVSLLALFKEKKEKPRS 144

[Close]
BLAST of MC02g0832 vs. NCBI nr
Match: XP_031395423.1 (40S ribosomal protein S23 isoform X1 [Punica granatum])

HSP 1 Score: 281 bits (719), Expect = 2.53e-95
Identity = 142/143 (99.30%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 2   SYRKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAK 61
           SYRKTRGMGAGRKLKSHRRRQRWADKAYKKS+LGNEWKKPFAGSSHAKGIVLEKIGIEAK
Sbjct: 3   SYRKTRGMGAGRKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAK 62

Query: 62  QPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRF 121
           QPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRF
Sbjct: 63  QPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRF 122

Query: 122 KVVKVSGVSLLALFKEKKEKPRS 144
           KVVKVSGVSLLALFKEKKEKPRS
Sbjct: 123 KVVKVSGVSLLALFKEKKEKPRS 145

[Close]
BLAST of MC02g0832 vs. NCBI nr
Match: KAF5953829.1 (hypothetical protein HYC85_006685 [Camellia sinensis] >THG01484.1 hypothetical protein TEA_010314 [Camellia sinensis var. sinensis])

HSP 1 Score: 280 bits (717), Expect = 6.49e-95
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0 

Query: 3   YRKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 62
           +RKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 11  HRKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 70

Query: 63  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 122
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 71  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 130

Query: 123 VVKVSGVSLLALFKEKKEKPRS 144
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 131 VVKVSGVSLLALFKEKKEKPRS 152

[Close]
BLAST of MC02g0832 vs. NCBI nr
Match: CAB3474730.1 (unnamed protein product, partial [Digitaria exilis] >CAB3478766.1 unnamed protein product, partial [Digitaria exilis])

HSP 1 Score: 280 bits (715), Expect = 9.96e-95
Identity = 139/144 (96.53%), Postives = 142/144 (98.61%), Query Frame = 0 

Query: 1   ISYRKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEA 60
           + YRKTRGMGAGRKLK+HRR QRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEA
Sbjct: 1   VLYRKTRGMGAGRKLKTHRRNQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEA 60

Query: 61  KQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVR 120
           KQPNSAIRKCARVQL+KNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVR
Sbjct: 61  KQPNSAIRKCARVQLVKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVR 120

Query: 121 FKVVKVSGVSLLALFKEKKEKPRS 144
           FKVVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 FKVVKVSGVSLLALFKEKKEKPRS 144

[Close]
BLAST of MC02g0832 vs. ExPASy TrEMBL
Match: A0A4Y7LHS7 (Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_046546 PE=3 SV=1)

HSP 1 Score: 282 bits (721), Expect = 5.86e-96
Identity = 141/144 (97.92%), Postives = 143/144 (99.31%), Query Frame = 0 

Query: 1   ISYRKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEA 60
           + YRKTRGMGAGRKLKSHRRRQRWADK+YKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEA
Sbjct: 1   MGYRKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEA 60

Query: 61  KQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVR 120
           KQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVR
Sbjct: 61  KQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVR 120

Query: 121 FKVVKVSGVSLLALFKEKKEKPRS 144
           FKVVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 FKVVKVSGVSLLALFKEKKEKPRS 144

[Close]
BLAST of MC02g0832 vs. ExPASy TrEMBL
Match: A0A5D3C1C1 (40S ribosomal protein S23 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002160 PE=3 SV=1)

HSP 1 Score: 281 bits (719), Expect = 1.18e-95
Identity = 142/144 (98.61%), Postives = 143/144 (99.31%), Query Frame = 0 

Query: 1   ISYRKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEA 60
           +S RKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEA
Sbjct: 1   MSCRKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEA 60

Query: 61  KQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVR 120
           KQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVR
Sbjct: 61  KQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVR 120

Query: 121 FKVVKVSGVSLLALFKEKKEKPRS 144
           FKVVKVSGVSLLALFKEKKEKPRS
Sbjct: 121 FKVVKVSGVSLLALFKEKKEKPRS 144

[Close]
BLAST of MC02g0832 vs. ExPASy TrEMBL
Match: A0A6P8DTI5 (40S ribosomal protein S23 isoform X1 OS=Punica granatum OX=22663 GN=LOC116206757 PE=3 SV=1)

HSP 1 Score: 281 bits (719), Expect = 1.22e-95
Identity = 142/143 (99.30%), Postives = 143/143 (100.00%), Query Frame = 0 

Query: 2   SYRKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAK 61
           SYRKTRGMGAGRKLKSHRRRQRWADKAYKKS+LGNEWKKPFAGSSHAKGIVLEKIGIEAK
Sbjct: 3   SYRKTRGMGAGRKLKSHRRRQRWADKAYKKSNLGNEWKKPFAGSSHAKGIVLEKIGIEAK 62

Query: 62  QPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRF 121
           QPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRF
Sbjct: 63  QPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRF 122

Query: 122 KVVKVSGVSLLALFKEKKEKPRS 144
           KVVKVSGVSLLALFKEKKEKPRS
Sbjct: 123 KVVKVSGVSLLALFKEKKEKPRS 145

[Close]
BLAST of MC02g0832 vs. ExPASy TrEMBL
Match: A0A7J7HM69 (Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_006685 PE=3 SV=1)

HSP 1 Score: 280 bits (717), Expect = 3.14e-95
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0 

Query: 3   YRKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 62
           +RKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 11  HRKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 70

Query: 63  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 122
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 71  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 130

Query: 123 VVKVSGVSLLALFKEKKEKPRS 144
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 131 VVKVSGVSLLALFKEKKEKPRS 152

[Close]
BLAST of MC02g0832 vs. ExPASy TrEMBL
Match: A0A4S4DGM1 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_010314 PE=3 SV=1)

HSP 1 Score: 280 bits (717), Expect = 3.14e-95
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0 

Query: 3   YRKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 62
           +RKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ
Sbjct: 11  HRKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 70

Query: 63  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 122
           PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK
Sbjct: 71  PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 130

Query: 123 VVKVSGVSLLALFKEKKEKPRS 144
           VVKVSGVSLLALFKEKKEKPRS
Sbjct: 131 VVKVSGVSLLALFKEKKEKPRS 152

[Close]
BLAST of MC02g0832 vs. TAIR 10
Match: AT5G02960.1 (Ribosomal protein S12/S23 family protein )

HSP 1 Score: 266.9 bits (681), Expect = 9.2e-72
Identity = 135/140 (96.43%), Postives = 135/140 (96.43%), Query Frame = 0 

Query: 5   KTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPN 64
           KTRGMGAGRKLK  R  QRWADK YKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPN
Sbjct: 3   KTRGMGAGRKLKRLRINQRWADKQYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPN 62

Query: 65  SAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVV 124
           SAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVV
Sbjct: 63  SAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVV 122

Query: 125 KVSGVSLLALFKEKKEKPRS 145
           KVSGVSLLALFKEKKEKPRS
Sbjct: 123 KVSGVSLLALFKEKKEKPRS 142

[Close]
BLAST of MC02g0832 vs. TAIR 10
Match: AT3G09680.1 (Ribosomal protein S12/S23 family protein )

HSP 1 Score: 258.1 bits (658), Expect = 4.3e-69
Identity = 132/140 (94.29%), Postives = 133/140 (95.00%), Query Frame = 0 

Query: 5   KTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPN 64
           KTRGMGAGRKLK  R  QRWADK YKKS+ GNEWKKPFA SSHAKGIVLEKIGIEAKQPN
Sbjct: 3   KTRGMGAGRKLKQLRITQRWADKHYKKSNRGNEWKKPFACSSHAKGIVLEKIGIEAKQPN 62

Query: 65  SAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVV 124
           SAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVV
Sbjct: 63  SAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVV 122

Query: 125 KVSGVSLLALFKEKKEKPRS 145
           KVSGVSLLALFKEKKEKPRS
Sbjct: 123 KVSGVSLLALFKEKKEKPRS 142

[Close]
BLAST of MC02g0832 vs. TAIR 10
Match: ATCG00065.1 (ribosomal protein S12A )

HSP 1 Score: 48.9 bits (115), Expect = 4.0e-06
Identity = 33/91 (36.26%), Postives = 51/91 (56.04%), Query Frame = 0 

Query: 36  NEWKKP-FAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNY 95
           N  K P   G    +G       I  K+PNSA+RK ARV+L  +G +I A++P  G  + 
Sbjct: 17  NVTKSPALRGCPQRRGTCTRVYTITPKKPNSALRKVARVRL-TSGFEITAYIPGIG--HN 76

Query: 96  IEENDEVLIAGFGRKGHAVGDIPGVRFKVVK 126
           ++E+  VL+     +G  V D+PGVR+ +V+
Sbjct: 77  LQEHSVVLV-----RGGRVKDLPGVRYHIVR 99

[Close]
BLAST of MC02g0832 vs. TAIR 10
Match: ATCG01230.1 (ribosomal protein S12B )

HSP 1 Score: 48.9 bits (115), Expect = 4.0e-06
Identity = 33/91 (36.26%), Postives = 51/91 (56.04%), Query Frame = 0 

Query: 36  NEWKKP-FAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNY 95
           N  K P   G    +G       I  K+PNSA+RK ARV+L  +G +I A++P  G  + 
Sbjct: 17  NVTKSPALRGCPQRRGTCTRVYTITPKKPNSALRKVARVRL-TSGFEITAYIPGIG--HN 76

Query: 96  IEENDEVLIAGFGRKGHAVGDIPGVRFKVVK 126
           ++E+  VL+     +G  V D+PGVR+ +V+
Sbjct: 77  LQEHSVVLV-----RGGRVKDLPGVRYHIVR 99

[Close]
BLAST of MC02g0832 vs. TAIR 10
Match: ATCG00905.1 (ribosomal protein S12C )

HSP 1 Score: 48.9 bits (115), Expect = 4.0e-06
Identity = 33/91 (36.26%), Postives = 51/91 (56.04%), Query Frame = 0 

Query: 36  NEWKKP-FAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNY 95
           N  K P   G    +G       I  K+PNSA+RK ARV+L  +G +I A++P  G  + 
Sbjct: 17  NVTKSPALRGCPQRRGTCTRVYTITPKKPNSALRKVARVRL-TSGFEITAYIPGIG--HN 76

Query: 96  IEENDEVLIAGFGRKGHAVGDIPGVRFKVVK 126
           ++E+  VL+     +G  V D+PGVR+ +V+
Sbjct: 77  LQEHSVVLV-----RGGRVKDLPGVRYHIVR 99

The following BLAST results are available for this feature:
BLAST of MC02g0832 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P462973.7e-7397.8640S ribosomal protein S23 OS=Fragaria ananassa OX=3747 GN=RPS23 PE=2 SV=1[more]
Q9M5Z93.1e-7297.1440S ribosomal protein S23 OS=Euphorbia esula OX=3993 GN=RPS23 PE=2 SV=1[more]
P492011.3e-7096.4340S ribosomal protein S23-2 OS=Arabidopsis thaliana OX=3702 GN=RPS23B PE=2 SV=2[more]
Q9SF356.0e-6894.2940S ribosomal protein S23-1 OS=Arabidopsis thaliana OX=3702 GN=RPS23A PE=2 SV=2[more]
Q9GRJ31.6e-6080.8540S ribosomal protein S23 OS=Lumbricus rubellus OX=35632 GN=RPS23 PE=2 SV=1[more]
BLAST of MC02g0832 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_026418399.11.21e-9597.9240S ribosomal protein S23 isoform X1 [Papaver somniferum] >XP_026424064.1 40S ri... [more]
TYK05731.12.45e-9598.6140S ribosomal protein S23 [Cucumis melo var. makuwa][more]
XP_031395423.12.53e-9599.3040S ribosomal protein S23 isoform X1 [Punica granatum][more]
KAF5953829.16.49e-9599.30hypothetical protein HYC85_006685 [Camellia sinensis] >THG01484.1 hypothetical p... [more]
CAB3474730.19.96e-9596.53unnamed protein product, partial [Digitaria exilis] >CAB3478766.1 unnamed protei... [more]
BLAST of MC02g0832 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A4Y7LHS75.86e-9697.92Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_046546 PE=3 SV=1[more]
A0A5D3C1C11.18e-9598.6140S ribosomal protein S23 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A6P8DTI51.22e-9599.3040S ribosomal protein S23 isoform X1 OS=Punica granatum OX=22663 GN=LOC116206757... [more]
A0A7J7HM693.14e-9599.30Uncharacterized protein OS=Camellia sinensis OX=4442 GN=HYC85_006685 PE=3 SV=1[more]
A0A4S4DGM13.14e-9599.30Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_0103... [more]
BLAST of MC02g0832 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G02960.19.2e-7296.43Ribosomal protein S12/S23 family protein [more]
AT3G09680.14.3e-6994.29Ribosomal protein S12/S23 family protein [more]
ATCG00065.14.0e-0636.26ribosomal protein S12A [more]
ATCG01230.14.0e-0636.26ribosomal protein S12B [more]
ATCG00905.14.0e-0636.26ribosomal protein S12C [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006032Ribosomal protein S12/S23PFAMPF00164Ribosom_S12_S23coord: 33..143
e-value: 7.0E-50
score: 167.4
IPR006032Ribosomal protein S12/S23PIRSFPIRSF002133RPS12p_RPS12a_RPS23e_RPS12ocoord: 18..144
e-value: 5.1E-33
score: 111.2
IPR006032Ribosomal protein S12/S23PANTHERPTHR1165230S RIBOSOMAL PROTEIN S12 FAMILY MEMBERcoord: 4..144
IPR006032Ribosomal protein S12/S23PROSITEPS00055RIBOSOMAL_S12coord: 61..68
NoneNo IPR availableGENE3D2.40.50.140coord: 27..144
e-value: 4.1E-47
score: 160.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..26
NoneNo IPR availablePANTHERPTHR11652:SF59BNACNNG03140D PROTEINcoord: 4..144
IPR005680Ribosomal protein S23, eukaryotic/archaealTIGRFAMTIGR00982TIGR00982coord: 8..143
e-value: 6.6E-53
score: 176.1
IPR005680Ribosomal protein S23, eukaryotic/archaealCDDcd03367Ribosomal_S23coord: 28..141
e-value: 3.48898E-74
score: 214.826
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 22..142

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC02g0832.1MC02g0832.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005840 ribosome
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome