MC02g0797 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g0797
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	RING-type E3 ubiquitin transferase
Location	MC02: 6319165 .. 6319767 (+)
RNA-Seq Expression	MC02g0797
Synteny	MC02g0797

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATCGAGTCCGCCGCCGCCACCTCCGGTGCCTGATTACTCTGGCTGGAGTCCGTTGTCAATCTCGACCATCGTCGTCGTCTGCATCATCTTCCTGTTGTTGAGCAACTACAGAATATTGAAACGATTGTGCCATGTCCTTCATGGGGTGATTTTCTGCCGACCTCGGGCCCACTTTGAAGAAAACCCTAACGATGCTTCTCCGCAAATCCATGGCCATGGATTGGATGCCTCGATGATTCGTTTGCTACCGATCTCACAGTTCAAAAAGAACGTAGAAGCCGGATCCCCGGCAAGTATCAATACGGAATGCGCGGTTTGCTTGGGCGATTTTGAAGAAGGGGAACTGATTAAACATTTACCAAATTGCAATCACTCGTTTCATAGCTCTTGCATCGATTCCTGGTTCCGAAACCACTCGAGTTGCCCTCTCTGCAGATCGCATGTCTTGGATTTCTCCGCCGATTTTACCAGTCCCAATTCTGCGTCGGCAATGCTGGAGACGCTGGGAAGGGAAGACATTTTACGAGAAGGGGATTATCAAACTATTCGTGCTCAAATTCTGCAAAGCTCGGAATTGAGAAGAGATGCATCGGATCAA

mRNA sequence

ATGCCATCGAGTCCGCCGCCGCCACCTCCGGTGCCTGATTACTCTGGCTGGAGTCCGTTGTCAATCTCGACCATCGTCGTCGTCTGCATCATCTTCCTGTTGTTGAGCAACTACAGAATATTGAAACGATTGTGCCATGTCCTTCATGGGGTGATTTTCTGCCGACCTCGGGCCCACTTTGAAGAAAACCCTAACGATGCTTCTCCGCAAATCCATGGCCATGGATTGGATGCCTCGATGATTCGTTTGCTACCGATCTCACAGTTCAAAAAGAACGTAGAAGCCGGATCCCCGGCAAGTATCAATACGGAATGCGCGGTTTGCTTGGGCGATTTTGAAGAAGGGGAACTGATTAAACATTTACCAAATTGCAATCACTCGTTTCATAGCTCTTGCATCGATTCCTGGTTCCGAAACCACTCGAGTTGCCCTCTCTGCAGATCGCATGTCTTGGATTTCTCCGCCGATTTTACCAGTCCCAATTCTGCGTCGGCAATGCTGGAGACGCTGGGAAGGGAAGACATTTTACGAGAAGGGGATTATCAAACTATTCGTGCTCAAATTCTGCAAAGCTCGGAATTGAGAAGAGATGCATCGGATCAA

Coding sequence (CDS)

ATGCCATCGAGTCCGCCGCCGCCACCTCCGGTGCCTGATTACTCTGGCTGGAGTCCGTTGTCAATCTCGACCATCGTCGTCGTCTGCATCATCTTCCTGTTGTTGAGCAACTACAGAATATTGAAACGATTGTGCCATGTCCTTCATGGGGTGATTTTCTGCCGACCTCGGGCCCACTTTGAAGAAAACCCTAACGATGCTTCTCCGCAAATCCATGGCCATGGATTGGATGCCTCGATGATTCGTTTGCTACCGATCTCACAGTTCAAAAAGAACGTAGAAGCCGGATCCCCGGCAAGTATCAATACGGAATGCGCGGTTTGCTTGGGCGATTTTGAAGAAGGGGAACTGATTAAACATTTACCAAATTGCAATCACTCGTTTCATAGCTCTTGCATCGATTCCTGGTTCCGAAACCACTCGAGTTGCCCTCTCTGCAGATCGCATGTCTTGGATTTCTCCGCCGATTTTACCAGTCCCAATTCTGCGTCGGCAATGCTGGAGACGCTGGGAAGGGAAGACATTTTACGAGAAGGGGATTATCAAACTATTCGTGCTCAAATTCTGCAAAGCTCGGAATTGAGAAGAGATGCATCGGATCAA

Protein sequence

MPSSPPPPPPVPDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHFEENPNDASPQIHGHGLDASMIRLLPISQFKKNVEAGSPASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILREGDYQTIRAQILQSSELRRDASDQ

Homology

[Close]

BLAST of MC02g0797 vs. ExPASy Swiss-Prot
Match: P93823 (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.0e-20
Identity = 67/180 (37.22%), Postives = 97/180 (53.89%), Query Frame = 0


Query: 6   PPPPPVPDYSGWSP--------------LSISTIVVVCIIFLLLSNYRILKRLCHVLHGV 65
           PPPPP P  +  SP              L+I+ I ++   FLL+S Y  + + C   H +
Sbjct: 16  PPPPPPPSTTFTSPIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQI 75

Query: 66  -IFCRPRAHFEENP-NDASPQIHGHGLDASMIRLLPISQFKK-NVEAG--SPASINTECA 125
            IF R R   ++NP    SP     GLD S IR +P+ +FKK +V AG    +  + EC+
Sbjct: 76  DIFRRRRRSSDQNPLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECS 135

Query: 126 VCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHV---LDFSADFTSPNSA 164
           VCL +F+E E ++ +PNC H FH  CID W + +++CPLCR+ V     F+ D  S  S+
Sbjct: 136 VCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSS 195

[Close]

BLAST of MC02g0797 vs. ExPASy Swiss-Prot
Match: Q7XLY8 (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 98.2 bits (243), Expect = 1.1e-19
Identity = 60/182 (32.97%), Postives = 91/182 (50.00%), Query Frame = 0


Query: 5   PPPPP------PVPDYSG--WSPLSISTIVVVCIIFLLLSNYRILKRLCHV---LHGVIF 64
           PPPPP         D SG  +SPL I+ I V+   FLL+S Y  + + C     L G +F
Sbjct: 35  PPPPPFDVAGTSADDSSGPVFSPLVIAIIGVLASAFLLVSYYTFISKYCGTVSSLRGRVF 94

Query: 65  CRPRAHFEENPNDASPQIHGH---------------GLDASMIRLLPISQFKKNVEAGSP 124
                         S   HGH               GLD ++I  + + ++++    G  
Sbjct: 95  GSSSGGAAYGGGAGSGGRHGHGQSRSHESWNVSPPSGLDETLINKITVCKYRR----GDG 154

Query: 125 ASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFT 161
               T+C+VCLG+F +GE ++ LP C+H+FH  CID+W ++HS+CPLCR+++   +    
Sbjct: 155 FVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANITFVTVGLA 212

[Close]

BLAST of MC02g0797 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 3.2e-19
Identity = 62/215 (28.84%), Postives = 107/215 (49.77%), Query Frame = 0


Query: 5   PPPPPPV-----PDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLC------HVLHGVIF 64
           PPPPPP+        + +  L+++ I ++   FLL+S Y  + + C       +L     
Sbjct: 17  PPPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSL 76

Query: 65  CRPRAHFEENPNDASPQIHGHGLDASMIRLLPISQFKKNVEAG----------SPASINT 124
            R R + ++     SP++   GLD S+IR +PI +FKK  +                 + 
Sbjct: 77  SRRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQ 136

Query: 125 ECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSA 184
           EC+VCL +F++ E ++ +PNC+H FH  CID W +N+++CPLCR+ V   S D + P   
Sbjct: 137 ECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRV---SCDTSFPPDR 196

Query: 185 SAMLETLGREDILREGDYQTIRAQILQSSELRRDA 199
            +   T     ++  G+ + +  ++  S    RD+
Sbjct: 197 VSAPSTSPENLVMLRGENEYVVIELGSSIGSDRDS 228

[Close]

BLAST of MC02g0797 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.2e-18
Identity = 55/157 (35.03%), Postives = 87/157 (55.41%), Query Frame = 0


Query: 5   PPPPPPV-------PDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRP- 64
           PPPPP            S +SPL I+ I ++    +L+S Y ++ + CH  H        
Sbjct: 35  PPPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSETL 94

Query: 65  -RAHFEENPNDASPQI--HGHGLDASMIRLLPISQFKKNVEAGSPASINTECAVCLGDFE 124
              H  E    ++ +I  +G GL+ SMI+ + + ++K    +G      ++C+VCL +FE
Sbjct: 95  NLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYK----SGDGFVDGSDCSVCLSEFE 154

Query: 125 EGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHV 151
           E E ++ LP CNH+FH  CID+W ++HS+CPLCR+ V
Sbjct: 155 ENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFV 187

[Close]

BLAST of MC02g0797 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 3.0e-17
Identity = 57/179 (31.84%), Postives = 89/179 (49.72%), Query Frame = 0


Query: 5   PPPPPPVPD------YSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRA 64
           PPPP    D       S +SPL I+ I ++   F+L+S Y ++ + CH           A
Sbjct: 38  PPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAA 97

Query: 65  HFEE-------------------NPNDASPQIHGHGLDASMIRLLPISQFKKN---VEAG 124
                                  NPN       G GLD S+I+ + + +++K    VE  
Sbjct: 98  AINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVE-- 157

Query: 125 SPASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSA 156
                +++C+VCL +F+E E ++ LP CNH+FH  CID+W ++HS+CPLCR+ ++  SA
Sbjct: 158 -----SSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSA 209

[Close]

BLAST of MC02g0797 vs. NCBI nr
Match: XP_031743630.1 (RING-H2 finger protein ATL52-like [Cucumis sativus] >KGN47355.1 hypothetical protein Csa_023057 [Cucumis sativus])

HSP 1 Score: 299 bits (765), Expect = 2.07e-100
Identity = 154/203 (75.86%), Postives = 168/203 (82.76%), Query Frame = 0


Query: 1   MPSSPPPPPPVPDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHF 60
           MPSSPPPP PVPDYS WSP SISTIVVVCI+FLLLSNYR+LK+LC VLHG+   RP   F
Sbjct: 1   MPSSPPPPSPVPDYSSWSPWSISTIVVVCIVFLLLSNYRLLKQLCRVLHGLFTGRPTVQF 60

Query: 61  EENPNDASPQIHGHGLDASMIRLLPISQFKKNVEAGSPASINTECAVCLGDFEEGELIKH 120
           EENPN+ S QIHGHGL+ SMIRLLPISQFKKN E+ S  S NTECAVCLG+FEEGELIKH
Sbjct: 61  EENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGELIKH 120

Query: 121 LPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILRE-- 180
           LPNCNHSFHS CID+WFRNHSSCPLCR  VL FS   T  +S+SAMLETLGRE++LRE  
Sbjct: 121 LPNCNHSFHSPCIDAWFRNHSSCPLCRLQVLSFS---TPDSSSSAMLETLGRENVLRERV 180

Query: 181 GDYQTIRAQILQSSELRRDASDQ 201
             YQT+RAQILQ  E RRDAS Q
Sbjct: 181 AHYQTLRAQILQHPEFRRDASIQ 200

[Close]

BLAST of MC02g0797 vs. NCBI nr
Match: KAG6570731.1 (RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010575.1 RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 292 bits (748), Expect = 9.84e-98
Identity = 152/206 (73.79%), Postives = 169/206 (82.04%), Query Frame = 0


Query: 1   MPSSPPPPPP---VPDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPR 60
           MPSSPPPPPP   VPDYS WSP SIS I +VCI+ LLLSNYRILKR C VLHG+   R  
Sbjct: 1   MPSSPPPPPPPSPVPDYSSWSPWSISIIAIVCIVVLLLSNYRILKRWCRVLHGLFCGRFV 60

Query: 61  AHFEENPNDASPQIHGHGLDASMIRLLPISQFKKNVEAGSPASINTECAVCLGDFEEGEL 120
             F+ENPND SP++H HGL+AS IRLLPISQFKKN EA S ASINTECAVCLG+FEEGEL
Sbjct: 61  VQFDENPNDPSPEVHVHGLEASTIRLLPISQFKKNEEAESTASINTECAVCLGEFEEGEL 120

Query: 121 IKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILR 180
           IK+LPNCNHSFHSSCID+W RNHSSCPLCR HV + S D  +P+S+SAMLETLGRED+ R
Sbjct: 121 IKNLPNCNHSFHSSCIDAWLRNHSSCPLCRLHVSNLSIDCPTPDSSSAMLETLGREDVER 180

Query: 181 E--GDYQTIRAQILQSSELRRDASDQ 201
           E    YQT+RAQILQ+ ELRRDAS Q
Sbjct: 181 ERVSYYQTLRAQILQNPELRRDASVQ 206

[Close]

BLAST of MC02g0797 vs. NCBI nr
Match: XP_023512261.1 (RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 287 bits (734), Expect = 1.33e-95
Identity = 149/206 (72.33%), Postives = 166/206 (80.58%), Query Frame = 0


Query: 1   MPSSPPPPPP---VPDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPR 60
           MPSSPPPPPP   VPDYS WSP SIS I +VCI+ LLLSNYRILKR C V HG+   R  
Sbjct: 1   MPSSPPPPPPPSPVPDYSSWSPWSISIIAIVCIVVLLLSNYRILKRWCRVFHGLFCGRSV 60

Query: 61  AHFEENPNDASPQIHGHGLDASMIRLLPISQFKKNVEAGSPASINTECAVCLGDFEEGEL 120
             F+ENPND SPQ+H HGL+AS IRLLPISQFKKN EA S ASINTECAVCLG+FEEGEL
Sbjct: 61  VQFDENPNDPSPQVHVHGLEASTIRLLPISQFKKNEEAESTASINTECAVCLGEFEEGEL 120

Query: 121 IKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDI-- 180
           IK+LPNCNHSFHSSCID+W RNHSSCPLCR HV + S D  +P+S+SAMLETL RED+  
Sbjct: 121 IKNLPNCNHSFHSSCIDAWLRNHSSCPLCRLHVSNLSIDCPTPDSSSAMLETLSREDVDG 180

Query: 181 LREGDYQTIRAQILQSSELRRDASDQ 201
            R   YQT+RAQILQ+ +LRRDAS Q
Sbjct: 181 ERVSYYQTLRAQILQNPDLRRDASVQ 206

[Close]

BLAST of MC02g0797 vs. NCBI nr
Match: XP_008448367.1 (PREDICTED: RING-H2 finger protein ATL66-like [Cucumis melo] >KAA0061954.1 RING-H2 finger protein ATL66-like [Cucumis melo var. makuwa] >TYK23976.1 RING-H2 finger protein ATL66-like [Cucumis melo var. makuwa])

HSP 1 Score: 286 bits (731), Expect = 3.21e-95
Identity = 148/203 (72.91%), Postives = 165/203 (81.28%), Query Frame = 0


Query: 1   MPSSPPPPPPVPDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHF 60
           MPSSPPPP PVPDYS WSP SISTIV+VC+IFLLLSNYR+LK+LC VLH +   RP   F
Sbjct: 1   MPSSPPPPSPVPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAVQF 60

Query: 61  EENPNDASPQIHGHGLDASMIRLLPISQFKKNVEAGSPASINTECAVCLGDFEEGELIKH 120
           EENPN+ S QIH HGL+ SMIRLLPISQFKK  E+ S  S NTECAVCLG+FEEGELIK+
Sbjct: 61  EENPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFEEGELIKN 120

Query: 121 LPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILRE-- 180
           LPNCNHSFHSSCID+WFR+HSSCPLCR  V  FS    +P+S+SAMLETLGRE+ILRE  
Sbjct: 121 LPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFS----TPDSSSAMLETLGRENILRERV 180

Query: 181 GDYQTIRAQILQSSELRRDASDQ 201
             YQT+RAQILQ  E RRD S Q
Sbjct: 181 AHYQTLRAQILQHPEFRRDESIQ 199

[Close]

BLAST of MC02g0797 vs. NCBI nr
Match: XP_021681156.1 (RING-H2 finger protein ATL39-like [Hevea brasiliensis])

HSP 1 Score: 170 bits (431), Expect = 1.27e-49
Identity = 99/201 (49.25%), Postives = 128/201 (63.68%), Query Frame = 0


Query: 1   MPSSPPPPPPVPDYSG---WSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPR 60
           MPSSP P P +  + G   W+P  I  ++VVCI  +L S YRILKR C  L+ + F R R
Sbjct: 1   MPSSPVPAPQL-QFEGSSQWNPYVIGPVIVVCIFIVLFSYYRILKRFCCALNVLTFSRNR 60

Query: 61  AHF----EENPNDASPQIHGHGLDASMIRLLPISQFKKNVEAGSPASINTECAVCLGDFE 120
                  E N  D S Q H HG +++++  LPISQF+K  E  S AS N ECAVCLG+FE
Sbjct: 61  VRMRHGSENNLEDLSLQYHSHGRESTIVCSLPISQFRKGKEEESRAS-NYECAVCLGEFE 120

Query: 121 EGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGRE 180
           EGE +KHLPNC H FH +CID+W +  S+CPLCRSHV D S +++   S + MLET  RE
Sbjct: 121 EGEWLKHLPNCAHVFHVACIDTWLQTRSNCPLCRSHVYDSSHEYSF--SMNTMLETTRRE 180

Query: 181 DIL--REGDYQTIRAQILQSS 192
           D    R   YQ +R++IL++S
Sbjct: 181 DFFHYRADHYQILRSEILRNS 197

[Close]

BLAST of MC02g0797 vs. ExPASy TrEMBL
Match: A0A0A0KCA5 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_6G303210 PE=3 SV=1)

HSP 1 Score: 299 bits (765), Expect = 1.00e-100
Identity = 154/203 (75.86%), Postives = 168/203 (82.76%), Query Frame = 0


Query: 1   MPSSPPPPPPVPDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHF 60
           MPSSPPPP PVPDYS WSP SISTIVVVCI+FLLLSNYR+LK+LC VLHG+   RP   F
Sbjct: 1   MPSSPPPPSPVPDYSSWSPWSISTIVVVCIVFLLLSNYRLLKQLCRVLHGLFTGRPTVQF 60

Query: 61  EENPNDASPQIHGHGLDASMIRLLPISQFKKNVEAGSPASINTECAVCLGDFEEGELIKH 120
           EENPN+ S QIHGHGL+ SMIRLLPISQFKKN E+ S  S NTECAVCLG+FEEGELIKH
Sbjct: 61  EENPNNPSLQIHGHGLETSMIRLLPISQFKKNEESESTTSFNTECAVCLGEFEEGELIKH 120

Query: 121 LPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILRE-- 180
           LPNCNHSFHS CID+WFRNHSSCPLCR  VL FS   T  +S+SAMLETLGRE++LRE  
Sbjct: 121 LPNCNHSFHSPCIDAWFRNHSSCPLCRLQVLSFS---TPDSSSSAMLETLGRENVLRERV 180

Query: 181 GDYQTIRAQILQSSELRRDASDQ 201
             YQT+RAQILQ  E RRDAS Q
Sbjct: 181 AHYQTLRAQILQHPEFRRDASIQ 200

[Close]

BLAST of MC02g0797 vs. ExPASy TrEMBL
Match: A0A5A7V3S2 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00390 PE=3 SV=1)

HSP 1 Score: 286 bits (731), Expect = 1.55e-95
Identity = 148/203 (72.91%), Postives = 165/203 (81.28%), Query Frame = 0


Query: 1   MPSSPPPPPPVPDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHF 60
           MPSSPPPP PVPDYS WSP SISTIV+VC+IFLLLSNYR+LK+LC VLH +   RP   F
Sbjct: 1   MPSSPPPPSPVPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAVQF 60

Query: 61  EENPNDASPQIHGHGLDASMIRLLPISQFKKNVEAGSPASINTECAVCLGDFEEGELIKH 120
           EENPN+ S QIH HGL+ SMIRLLPISQFKK  E+ S  S NTECAVCLG+FEEGELIK+
Sbjct: 61  EENPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFEEGELIKN 120

Query: 121 LPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILRE-- 180
           LPNCNHSFHSSCID+WFR+HSSCPLCR  V  FS    +P+S+SAMLETLGRE+ILRE  
Sbjct: 121 LPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFS----TPDSSSAMLETLGRENILRERV 180

Query: 181 GDYQTIRAQILQSSELRRDASDQ 201
             YQT+RAQILQ  E RRD S Q
Sbjct: 181 AHYQTLRAQILQHPEFRRDESIQ 199

[Close]

BLAST of MC02g0797 vs. ExPASy TrEMBL
Match: A0A1S3BIX6 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103490579 PE=3 SV=1)

HSP 1 Score: 286 bits (731), Expect = 1.55e-95
Identity = 148/203 (72.91%), Postives = 165/203 (81.28%), Query Frame = 0


Query: 1   MPSSPPPPPPVPDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHF 60
           MPSSPPPP PVPDYS WSP SISTIV+VC+IFLLLSNYR+LK+LC VLH +   RP   F
Sbjct: 1   MPSSPPPPSPVPDYSSWSPWSISTIVIVCVIFLLLSNYRLLKQLCRVLHELFSGRPAVQF 60

Query: 61  EENPNDASPQIHGHGLDASMIRLLPISQFKKNVEAGSPASINTECAVCLGDFEEGELIKH 120
           EENPN+ S QIH HGL+ SMIRLLPISQFKK  E+ S  S NTECAVCLG+FEEGELIK+
Sbjct: 61  EENPNNPSLQIHAHGLETSMIRLLPISQFKKKEESESTTSFNTECAVCLGEFEEGELIKN 120

Query: 121 LPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGREDILRE-- 180
           LPNCNHSFHSSCID+WFR+HSSCPLCR  V  FS    +P+S+SAMLETLGRE+ILRE  
Sbjct: 121 LPNCNHSFHSSCIDAWFRDHSSCPLCRLQVWSFS----TPDSSSAMLETLGRENILRERV 180

Query: 181 GDYQTIRAQILQSSELRRDASDQ 201
             YQT+RAQILQ  E RRD S Q
Sbjct: 181 AHYQTLRAQILQHPEFRRDESIQ 199

[Close]

BLAST of MC02g0797 vs. ExPASy TrEMBL
Match: A0A2C9W1B6 (RING-type E3 ubiquitin transferase OS=Manihot esculenta OX=3983 GN=MANES_04G030200 PE=3 SV=1)

HSP 1 Score: 164 bits (415), Expect = 1.70e-47
Identity = 96/200 (48.00%), Postives = 128/200 (64.00%), Query Frame = 0


Query: 1   MPSSPPPPPPV--PDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRA 60
           MP SP P  P+   +YS W+   I  ++ VC   +L S YR+L+RLC  L+     R RA
Sbjct: 1   MPPSPTPEAPLRLENYSQWNAYVIGPVIAVCSSVVLFSYYRMLRRLCCTLNTQTLPRNRA 60

Query: 61  HF----EENPNDASPQIHGHGLDASMIRLLPISQFKKNVEAGSPASINTECAVCLGDFEE 120
                 + N  D+S Q + HGL+++++R LPISQFKK  E  S AS N ECAVCLG+FEE
Sbjct: 61  QMSRINQNNLEDSSLQNYSHGLESNIMRSLPISQFKKEEE--SEAS-NRECAVCLGEFEE 120

Query: 121 GELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGRED 180
           GE +KHLPNC H FH +CID+WF+ HS+CPLCRSHV D   +++   S   +L TL RED
Sbjct: 121 GEWLKHLPNCAHVFHVACIDTWFQTHSNCPLCRSHVYDLCHEYSI--SMDTLLHTLRRED 180

Query: 181 ILREG--DYQTIRAQILQSS 192
              E    YQ +R++IL++S
Sbjct: 181 FFNERAEHYQNLRSEILRNS 195

[Close]

BLAST of MC02g0797 vs. ExPASy TrEMBL
Match: A0A5B7BBH0 (RING-type E3 ubiquitin transferase OS=Davidia involucrata OX=16924 GN=Din_035711 PE=3 SV=1)

HSP 1 Score: 161 bits (407), Expect = 8.98e-47
Identity = 82/170 (48.24%), Postives = 107/170 (62.94%), Query Frame = 0


Query: 9   PPVPDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHF----EENP 68
           PP  +   W+P  I+++  VC IFLL S YRIL+R C    G+ F R R       E NP
Sbjct: 8   PPTIEPPHWNPWVIASVGTVCTIFLLFSYYRILERHCCSFRGMTFSRHRRQRQLLNENNP 67

Query: 69  NDASPQIHGHGLDASMIRLLPISQFKKNVEAGSPASINTECAVCLGDFEEGELIKHLPNC 128
           +D S Q    GLD+ ++  LPI+QFKK  +       NT+CAVCLG+FEE E ++HLPNC
Sbjct: 68  DDPSLQFQSQGLDSYILHSLPITQFKKKKKEEELRQSNTDCAVCLGEFEESEWLRHLPNC 127

Query: 129 NHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSASAMLETLGRED 174
           +H+FH SCID+WF+NHS+CPLCRSH+ D +       S   +LET  RED
Sbjct: 128 SHAFHVSCIDTWFQNHSNCPLCRSHIYDLAMHHEYSVSMYTLLETSRRED 177

[Close]

BLAST of MC02g0797 vs. TAIR 10
Match: AT1G04360.1 (RING/U-box superfamily protein )

HSP 1 Score: 101.7 bits (252), Expect = 7.2e-22
Identity = 67/180 (37.22%), Postives = 97/180 (53.89%), Query Frame = 0


Query: 6   PPPPPVPDYSGWSP--------------LSISTIVVVCIIFLLLSNYRILKRLCHVLHGV 65
           PPPPP P  +  SP              L+I+ I ++   FLL+S Y  + + C   H +
Sbjct: 16  PPPPPPPSTTFTSPIFPRTSSSGTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQI 75

Query: 66  -IFCRPRAHFEENP-NDASPQIHGHGLDASMIRLLPISQFKK-NVEAG--SPASINTECA 125
            IF R R   ++NP    SP     GLD S IR +P+ +FKK +V AG    +  + EC+
Sbjct: 76  DIFRRRRRSSDQNPLMIYSPHEVNRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECS 135

Query: 126 VCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHV---LDFSADFTSPNSA 164
           VCL +F+E E ++ +PNC H FH  CID W + +++CPLCR+ V     F+ D  S  S+
Sbjct: 136 VCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSS 195

[Close]

BLAST of MC02g0797 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 96.7 bits (239), Expect = 2.3e-20
Identity = 62/215 (28.84%), Postives = 107/215 (49.77%), Query Frame = 0


Query: 5   PPPPPPV-----PDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLC------HVLHGVIF 64
           PPPPPP+        + +  L+++ I ++   FLL+S Y  + + C       +L     
Sbjct: 17  PPPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSL 76

Query: 65  CRPRAHFEENPNDASPQIHGHGLDASMIRLLPISQFKKNVEAG----------SPASINT 124
            R R + ++     SP++   GLD S+IR +PI +FKK  +                 + 
Sbjct: 77  SRRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQ 136

Query: 125 ECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSADFTSPNSA 184
           EC+VCL +F++ E ++ +PNC+H FH  CID W +N+++CPLCR+ V   S D + P   
Sbjct: 137 ECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRV---SCDTSFPPDR 196

Query: 185 SAMLETLGREDILREGDYQTIRAQILQSSELRRDA 199
            +   T     ++  G+ + +  ++  S    RD+
Sbjct: 197 VSAPSTSPENLVMLRGENEYVVIELGSSIGSDRDS 228

[Close]

BLAST of MC02g0797 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 94.7 bits (234), Expect = 8.8e-20
Identity = 55/157 (35.03%), Postives = 87/157 (55.41%), Query Frame = 0


Query: 5   PPPPPPV-------PDYSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRP- 64
           PPPPP            S +SPL I+ I ++    +L+S Y ++ + CH  H        
Sbjct: 35  PPPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYTLISKYCHRHHQTSSSETL 94

Query: 65  -RAHFEENPNDASPQI--HGHGLDASMIRLLPISQFKKNVEAGSPASINTECAVCLGDFE 124
              H  E    ++ +I  +G GL+ SMI+ + + ++K    +G      ++C+VCL +FE
Sbjct: 95  NLNHNGEGFFSSTQRISTNGDGLNESMIKSITVYKYK----SGDGFVDGSDCSVCLSEFE 154

Query: 125 EGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHV 151
           E E ++ LP CNH+FH  CID+W ++HS+CPLCR+ V
Sbjct: 155 ENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFV 187

[Close]

BLAST of MC02g0797 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 90.1 bits (222), Expect = 2.2e-18
Identity = 57/179 (31.84%), Postives = 89/179 (49.72%), Query Frame = 0


Query: 5   PPPPPPVPD------YSGWSPLSISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRA 64
           PPPP    D       S +SPL I+ I ++   F+L+S Y ++ + CH           A
Sbjct: 38  PPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAA 97

Query: 65  HFEE-------------------NPNDASPQIHGHGLDASMIRLLPISQFKKN---VEAG 124
                                  NPN       G GLD S+I+ + + +++K    VE  
Sbjct: 98  AINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVE-- 157

Query: 125 SPASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNHSSCPLCRSHVLDFSA 156
                +++C+VCL +F+E E ++ LP CNH+FH  CID+W ++HS+CPLCR+ ++  SA
Sbjct: 158 -----SSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSA 209

[Close]

BLAST of MC02g0797 vs. TAIR 10
Match: AT5G05280.1 (RING/U-box superfamily protein )

HSP 1 Score: 88.2 bits (217), Expect = 8.2e-18
Identity = 46/132 (34.85%), Postives = 73/132 (55.30%), Query Frame = 0


Query: 21  SISTIVVVCIIFLLLSNYRILKRLCHVLHGVIFCRPRAHFEENPNDASPQIHGHGLDASM 80
           S+ T +V+ +  LL +    L  +  VL  V+ C  R    E+P D +  +   G+    
Sbjct: 36  SMDTHMVIILAALLCALICAL-GINSVLRCVLRCTRRFTPNEDPVDTNANV-AKGIKKRA 95

Query: 81  IRLLPISQFKKNVEAGSPASINTECAVCLGDFEEGELIKHLPNCNHSFHSSCIDSWFRNH 140
           ++++P+  +   ++  +     TEC +CLGDF EGE ++ LP CNH FH  CID+W  +H
Sbjct: 96  LKVIPVDSYSPELKMKA-----TECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSH 155

Query: 141 SSCPLCRSHVLD 153
           SSCP CR  +L+
Sbjct: 156 SSCPTCRQSLLE 160

The following BLAST results are available for this feature:

BLAST of MC02g0797 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93823	1.0e-20	37.22	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1	[more]
Q7XLY8	1.1e-19	32.97	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=3994...	[more]
Q9LSW9	3.2e-19	28.84	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
Q9LF64	1.2e-18	35.03	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q9SRQ8	3.0e-17	31.84	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]

BLAST of MC02g0797 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031743630.1	2.07e-100	75.86	RING-H2 finger protein ATL52-like [Cucumis sativus] >KGN47355.1 hypothetical pro...	[more]
KAG6570731.1	9.84e-98	73.79	RING-H2 finger protein ATL16, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_023512261.1	1.33e-95	72.33	RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo]	[more]
XP_008448367.1	3.21e-95	72.91	PREDICTED: RING-H2 finger protein ATL66-like [Cucumis melo] >KAA0061954.1 RING-H...	[more]
XP_021681156.1	1.27e-49	49.25	RING-H2 finger protein ATL39-like [Hevea brasiliensis]	[more]

BLAST of MC02g0797 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCA5	1.00e-100	75.86	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_6G303210 PE...	[more]
A0A5A7V3S2	1.55e-95	72.91	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3BIX6	1.55e-95	72.91	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103490579 PE=3 ...	[more]
A0A2C9W1B6	1.70e-47	48.00	RING-type E3 ubiquitin transferase OS=Manihot esculenta OX=3983 GN=MANES_04G0302...	[more]
A0A5B7BBH0	8.98e-47	48.24	RING-type E3 ubiquitin transferase OS=Davidia involucrata OX=16924 GN=Din_035711...	[more]

BLAST of MC02g0797 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04360.1	7.2e-22	37.22	RING/U-box superfamily protein	[more]
AT5G43420.1	2.3e-20	28.84	RING/U-box superfamily protein	[more]
AT5G17600.1	8.8e-20	35.03	RING/U-box superfamily protein	[more]
AT3G03550.1	2.2e-18	31.84	RING/U-box superfamily protein	[more]
AT5G05280.1	8.2e-18	34.85	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 105..146 e-value: 1.1E-6 score: 38.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 104..147 e-value: 6.2E-13 score: 48.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 105..147 score: 12.622055
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 76..155 e-value: 1.7E-21 score: 77.2
None	No IPR available	PANTHER	PTHR45676:SF107	RING/U-BOX SUPERFAMILY PROTEIN	coord: 14..160
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 104..147 e-value: 4.88221E-17 score: 69.6381
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 104..152
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 14..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g0797.1	MC02g0797.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane