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MC02g0787 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: utr5polypeptideCDSutr3 Hold the cursor over a type above to highlight its positions in the sequence below.GTGAGCATTACGGCGTCGTAGCGGGCAAAAACGCGTACAAACCATGACCCGACCCGATCCGACCCGATTATATTAAGTCTTCATATCAATATCAACAAATAAAAAATCTTCAGGTATCGCCTTATTCTCTCCCAAACCCTTCTCTTCCGACGGAACAGCGAAACCCTAATTTCCTATTTTCTCAGTCTTCTCTTTCGACTGCTTCACTGTTTCTTCTCGATTTCTCTTCGAACATGGCTGCTCCTCTGGATATGAGCCTCGACGATATCATAAAGAACAACAAAAAATCCAGATCCGGAAATTCCAGAGGTGGTCGCGGCCGACCTTCCGGACCCGGTCCCGTCCGCCGATTTCCCAATCGTGCCGCTAATCGCACGCCTTATGCCGCACCCAAGGTATGGCTTCGAGTTCTAGGTCGCTGTATCTCCTCTTTTCCCTTTCGAATTTTTTTTAATTTTTGTTTTGATTTGTGAATCTTGCGATAGGCACCGGAAACGGCTTGGCAGCATGATATGTTTATCGATCAGACTTCTGGATTCGCTGTGCAAGCGGGGCGAGCCTCTGCCATTCAGACTGGGACTAAGCTTTACATATCTAATTTGGATTACGGCGTTTCCAATGAAGATATCAAGGTATTTATTACTCTTGTGAATGAATAAAAAGAGAGGAGAGATAGATAGTTTCTTTTTGCCTACTGAAAGTGGTGGTGCTTACAGGAACTTTTTTCAGAAGTTGGTGATATGAAACACTACTCAATCCATTATGATAAGAGTGGAAGATCCAAGGTATCCTACGAAGCCTGGCATAATACTGGTTCTTGTGAATTCATTATATTGGTCGAAGTTTAGAAGTCCTCTTTTCCATAGGGAACGGCAGAAGTAGTTTTCTCACGACGAGTAGATGCTGTTGCGGCTGTCAAGAAGTACAACAACGTGCAGCTTGATGGAAAACCAATGAAGATAGAGATTGTTGGAACTAATATTGCGACCCCTGCTGCTGTTCCTACTGCCGCTGTAGCCCCCTTCGAAAATTTAAACGGGTTTCCTAGAAGGTACTGGATCTTATTCTAAGTGGCAGAAAATAGGGCATGAGTGATCTGCTTGATGAATATAATTGGCTGCAAGCACTAACACAATGTTCCAAAACTTATTATGAATCGCAAGTTGTGTTCGTATGTCATGTGATATTTGCTGTTTTTAGTTTCTATAAAGCCTTTGTTGATATAACTATTAATATTTTCCTTGTATTCACGAGCTTTTGTTCTGCTTTTATAACTATTAATATTTGCTGTTTTTAGTTTCTATAAAGCCTTTGTTCCTATAACTATTAATATTTTCCTTGTATTCACGAGCTTTTGTTCTGTTTTTAAGAATCTCCACTGCAGCCTGCCCATGGCTGCTACTTAATGTATCTAGTACATTTTAGGTTGTAATATGCTATTGTATTTCTAGTCTTGAAATCTGCCTCTAGGCTCATTATGCACTTGTATATATTTATAAACTTTATTCTGGTTCTTTTTTATTTTCAGCTGTGTTTGCTTGATTCTGGTGGCATTCATTTTATAATTAGCAGTACCATTGGCTATGGCATTGTATATCGTATGAACATTGTTTTTGACGTGGAACAGGCAGCAAGGTAGGGGTGGTCTGCCATCACGTCAACGTGGCGGAGGCGGAGGAGGTCGTGGTTTTGGAAGAGGGCGTGGGAGAGGAAGAGGTCCCAGTGAAAAAGTTTCTGCCGAAGATCTTGATGCGGACTTAGAGAAGTATCATGCCGAATCTATGCAAATAAATTAGTGGATGCTTATATGCTTTGATGCAGCCACCCCCCATCTGTTTGCTGTATCGCTACCATTGTCTTACCTTCGCAGAAATGGGCTATAGTGTTCCTTAGAATTGGTTTGAATTTCTTTACAACTTTTTGGGCTTTTGTTGTTTAGCTTTCATATGACTTCAGCATGGTAATGTAATTGACGAACAGAAGTCAGTGTGTACTCTGCTTTCATTCACTAAGTCCTTTCTGTTTCATTTAATGAGTTGGGAATCGAAGTGGATCTATTACCCTTTTGCCTCCCGATCACATCTGCAAGGATGACATTGGTTGGAATAAAATGCCACCCACCGCTGCAAATTATACAACAAATGAGTTGCTGTTCCCAATTGAGGTAAGGCATCTTCATTTCTGTACAGTCGATTTCTGAATTCTTTTCTAATAATTTCTAACAAATTCGTTATTTCTCTTTTAATGTTTTCTCAGGGAACTTCGACTCGATTAAAAACGAATATTTAACCATGAAGTGTTGAACATTTCAAGGGTTGGCTAACGTGCTAAAAGACAAATAGTCTTGATAGCTATGGGATCCGACTTGGTCGAATTATTTTAAGAAACTACCAAGCTGAATTTGTTGCCTTTTGGTCTTACGGAATCCTCATCTCTGCCTGCGTTTTATGGTAAAAATGCCTGGTTACAGGTGATATTCTTGTTTTAAAAGTAATTGTTGATCAAACATGTGCAACGTGGTGGTATTCTACTGCTGTTCTTGTGGAAAAATCCGCAGAGCAATTTGCCGCAAACATGGGGGCGGCGGGCATATTTATGAGGTACCATACCATCACTGGTGAGGACTGGACTGGTCAAGTTTTTCGATATCTGCTCGAGTTCTGCTAGCACATGATGGATTGCATCATGCGGTCTTGGCTGATCAACGAGCGGGAAAAACTTGGCCTCGCAGGAATTTATTTAAATACGCATTTTCTGCATGTGTTTGAATATGTTTTAAACCTTCCTGTGGATTGTGTTCCCATGTGTTAGTTATAGATGATGAAGGTATGTATAGTGGTGTAATGTTATTGGATTCTAGAACACATTCAGCGATGCCGTAAGTGGCTGTCTGTGTGTTTGATTTTATCTTTTCCTTTTTCTTTTTTGCTCTTCGATTAAGCAGCAAGAATTGCGAATTGCCCTTATCTTTAGCTTGTTCTATGCGTTTGGTATTAATGTATCTAGGTTGATCGCGCTGTCCCAATTTTGGTATTTGTTATATGTTCTTAGGTTTTTACTAGATGTTACAGTATGAATTTTAACTCTTG GTGAGCATTACGGCGTCGTAGCGGGCAAAAACGCGTACAAACCATGACCCGACCCGATCCGACCCGATTATATTAAGTCTTCATATCAATATCAACAAATAAAAAATCTTCAGGTATCGCCTTATTCTCTCCCAAACCCTTCTCTTCCGACGGAACAGCGAAACCCTAATTTCCTATTTTCTCAGTCTTCTCTTTCGACTGCTTCACTGTTTCTTCTCGATTTCTCTTCGAACATGGCTGCTCCTCTGGATATGAGCCTCGACGATATCATAAAGAACAACAAAAAATCCAGATCCGGAAATTCCAGAGGTGGTCGCGGCCGACCTTCCGGACCCGGTCCCGTCCGCCGATTTCCCAATCGTGCCGCTAATCGCACGCCTTATGCCGCACCCAAGGCACCGGAAACGGCTTGGCAGCATGATATGTTTATCGATCAGACTTCTGGATTCGCTGTGCAAGCGGGGCGAGCCTCTGCCATTCAGACTGGGACTAAGCTTTACATATCTAATTTGGATTACGGCGTTTCCAATGAAGATATCAAGGAACTTTTTTCAGAAGTTGGTGATATGAAACACTACTCAATCCATTATGATAAGAGTGGAAGATCCAAGGGAACGGCAGAAGTAGTTTTCTCACGACGAGTAGATGCTGTTGCGGCTGTCAAGAAGTACAACAACGTGCAGCTTGATGGAAAACCAATGAAGATAGAGATTGTTGGAACTAATATTGCGACCCCTGCTGCTGTTCCTACTGCCGCTGTAGCCCCCTTCGAAAATTTAAACGGGTTTCCTAGAAGGCAGCAAGGTAGGGGTGGTCTGCCATCACGTCAACGTGGCGGAGGCGGAGGAGGTCGTGGTTTTGGAAGAGGGCGTGGGAGAGGAAGAGGTCCCAGTGAAAAAGTTTCTGCCGAAGATCTTGATGCGGACTTAGAGAAGTATCATGCCGAATCTATGCAAATAAATTAGTGGATGCTTATATGCTTTGATGCAGCCACCCCCCATCTGTTTGCTGTATCGCTACCATTGTCTTACCTTCGCAGAAATGGGCTATAGTGTTCCTTAGAATTGGTTTGAATTTCTTTACAACTTTTTGGGCTTTTGTTGTTTAGCTTTCATATGACTTCAGCATGGTAATGTAATTGACGAACAGAAGTCAGTGTGTACTCTGCTTTCATTCACTAAGTCCTTTCTGTTTCATTTAATGAGTTGGGAATCGAAGTGGATCTATTACCCTTTTGCCTCCCGATCACATCTGCAAGGATGACATTGGTTGGAATAAAATGCCACCCACCGCTGCAAATTATACAACAAATGAGTTGCTGTTCCCAATTGAGGGAACTTCGACTCGATTAAAAACGAATATTTAACCATGAAGTGTTGAACATTTCAAGGGTTGGCTAACGTGCTAAAAGACAAATAGTCTTGATAGCTATGGGATCCGACTTGGTCGAATTATTTTAAGAAACTACCAAGCTGAATTTGTTGCCTTTTGGTCTTACGGAATCCTCATCTCTGCCTGCGTTTTATGGTAAAAATGCCTGGTTACAGGTGATATTCTTGTTTTAAAAGTAATTGTTGATCAAACATGTGCAACGTGGTGGTATTCTACTGCTGTTCTTGTGGAAAAATCCGCAGAGCAATTTGCCGCAAACATGGGGGCGGCGGGCATATTTATGAGGTACCATACCATCACTGGTGAGGACTGGACTGGTCAAGTTTTTCGATATCTGCTCGAGTTCTGCTAGCACATGATGGATTGCATCATGCGGTCTTGGCTGATCAACGAGCGGGAAAAACTTGGCCTCGCAGGAATTTATTTAAATACGCATTTTCTGCATGTGTTTGAATATGTTTTAAACCTTCCTGTGGATTGTGTTCCCATGTGTTAGTTATAGATGATGAAGGTATGTATAGTGGTGTAATGTTATTGGATTCTAGAACACATTCAGCGATGCCGTAAGTGGCTGTCTGTGTGTTTGATTTTATCTTTTCCTTTTTCTTTTTTGCTCTTCGATTAAGCAGCAAGAATTGCGAATTGCCCTTATCTTTAGCTTGTTCTATGCGTTTGGTATTAATGTATCTAGGTTGATCGCGCTGTCCCAATTTTGGTATTTGTTATATGTTCTTAGGTTTTTACTAGATGTTACAGTATGAATTTTAACTCTTG ATGGCTGCTCCTCTGGATATGAGCCTCGACGATATCATAAAGAACAACAAAAAATCCAGATCCGGAAATTCCAGAGGTGGTCGCGGCCGACCTTCCGGACCCGGTCCCGTCCGCCGATTTCCCAATCGTGCCGCTAATCGCACGCCTTATGCCGCACCCAAGGCACCGGAAACGGCTTGGCAGCATGATATGTTTATCGATCAGACTTCTGGATTCGCTGTGCAAGCGGGGCGAGCCTCTGCCATTCAGACTGGGACTAAGCTTTACATATCTAATTTGGATTACGGCGTTTCCAATGAAGATATCAAGGAACTTTTTTCAGAAGTTGGTGATATGAAACACTACTCAATCCATTATGATAAGAGTGGAAGATCCAAGGGAACGGCAGAAGTAGTTTTCTCACGACGAGTAGATGCTGTTGCGGCTGTCAAGAAGTACAACAACGTGCAGCTTGATGGAAAACCAATGAAGATAGAGATTGTTGGAACTAATATTGCGACCCCTGCTGCTGTTCCTACTGCCGCTGTAGCCCCCTTCGAAAATTTAAACGGGTTTCCTAGAAGGCAGCAAGGTAGGGGTGGTCTGCCATCACGTCAACGTGGCGGAGGCGGAGGAGGTCGTGGTTTTGGAAGAGGGCGTGGGAGAGGAAGAGGTCCCAGTGAAAAAGTTTCTGCCGAAGATCTTGATGCGGACTTAGAGAAGTATCATGCCGAATCTATGCAAATAAATTAG MAAPLDMSLDDIIKNNKKSRSGNSRGGRGRPSGPGPVRRFPNRAANRTPYAAPKAPETAWQHDMFIDQTSGFAVQAGRASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKHYSIHYDKSGRSKGTAEVVFSRRVDAVAAVKKYNNVQLDGKPMKIEIVGTNIATPAAVPTAAVAPFENLNGFPRRQQGRGGLPSRQRGGGGGGRGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN Homology
BLAST of MC02g0787 vs. ExPASy Swiss-Prot
Match: Q8L773 (THO complex subunit 4A OS=Arabidopsis thaliana OX=3702 GN=ALY1 PE=1 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 3.5e-68 Identity = 160/251 (63.75%), Postives = 192/251 (76.49%), Query Frame = 0
BLAST of MC02g0787 vs. ExPASy Swiss-Prot
Match: Q8L719 (THO complex subunit 4B OS=Arabidopsis thaliana OX=3702 GN=ALY2 PE=1 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 1.9e-61 Identity = 162/291 (55.67%), Postives = 185/291 (63.57%), Query Frame = 0
BLAST of MC02g0787 vs. ExPASy Swiss-Prot
Match: Q6NQ72 (THO complex subunit 4D OS=Arabidopsis thaliana OX=3702 GN=ALY4 PE=1 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 3.3e-42 Identity = 126/292 (43.15%), Postives = 164/292 (56.16%), Query Frame = 0
BLAST of MC02g0787 vs. ExPASy Swiss-Prot
Match: B5FXN8 (THO complex subunit 4 OS=Taeniopygia guttata OX=59729 GN=ALYREF PE=2 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 1.2e-39 Identity = 122/267 (45.69%), Postives = 154/267 (57.68%), Query Frame = 0
BLAST of MC02g0787 vs. ExPASy Swiss-Prot
Match: Q94EH8 (THO complex subunit 4C OS=Arabidopsis thaliana OX=3702 GN=ALY3 PE=1 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 3.4e-39 Identity = 123/303 (40.59%), Postives = 166/303 (54.79%), Query Frame = 0
BLAST of MC02g0787 vs. NCBI nr
Match: XP_022148377.1 (THO complex subunit 4A-like [Momordica charantia]) HSP 1 Score: 473 bits (1216), Expect = 7.61e-168 Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0
BLAST of MC02g0787 vs. NCBI nr
Match: XP_038901991.1 (THO complex subunit 4A-like [Benincasa hispida]) HSP 1 Score: 416 bits (1069), Expect = 1.56e-145 Identity = 220/243 (90.53%), Postives = 223/243 (91.77%), Query Frame = 0
BLAST of MC02g0787 vs. NCBI nr
Match: XP_004143092.1 (THO complex subunit 4A [Cucumis sativus] >KGN47175.1 hypothetical protein Csa_020836 [Cucumis sativus]) HSP 1 Score: 412 bits (1058), Expect = 7.40e-144 Identity = 217/243 (89.30%), Postives = 222/243 (91.36%), Query Frame = 0
BLAST of MC02g0787 vs. NCBI nr
Match: XP_008448384.1 (PREDICTED: THO complex subunit 4A-like isoform X1 [Cucumis melo] >XP_008448386.1 PREDICTED: THO complex subunit 4A-like isoform X1 [Cucumis melo] >XP_008448387.1 PREDICTED: THO complex subunit 4A-like isoform X1 [Cucumis melo] >XP_016900540.1 PREDICTED: THO complex subunit 4A-like isoform X1 [Cucumis melo]) HSP 1 Score: 409 bits (1051), Expect = 8.63e-143 Identity = 216/243 (88.89%), Postives = 222/243 (91.36%), Query Frame = 0
BLAST of MC02g0787 vs. NCBI nr
Match: XP_023006955.1 (THO complex subunit 4A-like [Cucurbita maxima]) HSP 1 Score: 407 bits (1045), Expect = 7.34e-142 Identity = 216/243 (88.89%), Postives = 220/243 (90.53%), Query Frame = 0
BLAST of MC02g0787 vs. ExPASy TrEMBL
Match: A0A6J1D4W8 (THO complex subunit 4A-like OS=Momordica charantia OX=3673 GN=LOC111017043 PE=4 SV=1) HSP 1 Score: 473 bits (1216), Expect = 3.69e-168 Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0
BLAST of MC02g0787 vs. ExPASy TrEMBL
Match: A0A0A0KBU2 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G193610 PE=4 SV=1) HSP 1 Score: 412 bits (1058), Expect = 3.58e-144 Identity = 217/243 (89.30%), Postives = 222/243 (91.36%), Query Frame = 0
BLAST of MC02g0787 vs. ExPASy TrEMBL
Match: A0A1S3BK70 (THO complex subunit 4A-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490589 PE=4 SV=1) HSP 1 Score: 409 bits (1051), Expect = 4.18e-143 Identity = 216/243 (88.89%), Postives = 222/243 (91.36%), Query Frame = 0
BLAST of MC02g0787 vs. ExPASy TrEMBL
Match: A0A6J1L1M6 (THO complex subunit 4A-like OS=Cucurbita maxima OX=3661 GN=LOC111499593 PE=4 SV=1) HSP 1 Score: 407 bits (1045), Expect = 3.55e-142 Identity = 216/243 (88.89%), Postives = 220/243 (90.53%), Query Frame = 0
BLAST of MC02g0787 vs. ExPASy TrEMBL
Match: A0A6J1G721 (THO complex subunit 4A-like OS=Cucurbita moschata OX=3662 GN=LOC111451345 PE=4 SV=1) HSP 1 Score: 406 bits (1044), Expect = 5.05e-142 Identity = 216/243 (88.89%), Postives = 220/243 (90.53%), Query Frame = 0
BLAST of MC02g0787 vs. TAIR 10
Match: AT5G59950.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 259.6 bits (662), Expect = 2.5e-69 Identity = 160/251 (63.75%), Postives = 192/251 (76.49%), Query Frame = 0
BLAST of MC02g0787 vs. TAIR 10
Match: AT5G59950.5 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 259.2 bits (661), Expect = 3.3e-69 Identity = 160/252 (63.49%), Postives = 192/252 (76.19%), Query Frame = 0
BLAST of MC02g0787 vs. TAIR 10
Match: AT5G59950.3 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 253.4 bits (646), Expect = 1.8e-67 Identity = 159/251 (63.35%), Postives = 191/251 (76.10%), Query Frame = 0
BLAST of MC02g0787 vs. TAIR 10
Match: AT5G02530.2 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 239.2 bits (609), Expect = 3.5e-63 Identity = 162/289 (56.06%), Postives = 185/289 (64.01%), Query Frame = 0
BLAST of MC02g0787 vs. TAIR 10
Match: AT5G02530.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 237.3 bits (604), Expect = 1.3e-62 Identity = 162/291 (55.67%), Postives = 185/291 (63.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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