MC02g0785 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g0785
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Pentatricopeptide repeat-containing protein
Location	MC02: 6233818 .. 6234357 (+)
RNA-Seq Expression	MC02g0785
Synteny	MC02g0785

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAGAAAATGTTTTGATTCGAACTCTCGATGACTCCAGGTTGGCCTTGAGATTCTTCAATTTCTTGGGATTGCATAGGAATTTCCATCACTCCACTGCCTCATTTTGTATTTTAATTCATTCTTTGGTTCAGAGTAGTCTGTTTTGGCCTGCCTCTTCGCTTTTGCAAACCCTTTTGCTCCGTGGGCTAAACCCACTGGAGATTTTTTCGAATTTTTTGGAATCTTATAGGAAGTACAAATTTTCTTCTAGTTCGGGTTTTGATATGTTGATTCAGTATTACGTGCAAAACAAGAGGGAAATGGATGGTGTTCTGGTTATAAATCTCATGAGGGACCATGGGATTTGGCCTGAAGTTAGGACTTTAAGTGCTCTGTTAAATGCTCTTGCGAGAATTAGGAAGTTCCGCCAGGTCTTGGAACTCTTTGATACCCTTGTGAATGCGGGTGTTAAGCCTGATAGTTATATTTACACGGTGGCGGTTCGATGCTTGTGTGAATTGAAGTACTTTAGCAAGGCCAAGGAAGTAATCAATCAGGCC

mRNA sequence

GTAGAAAATGTTTTGATTCGAACTCTCGATGACTCCAGGTTGGCCTTGAGATTCTTCAATTTCTTGGGATTGCATAGGAATTTCCATCACTCCACTGCCTCATTTTGTATTTTAATTCATTCTTTGGTTCAGAGTAGTCTGTTTTGGCCTGCCTCTTCGCTTTTGCAAACCCTTTTGCTCCGTGGGCTAAACCCACTGGAGATTTTTTCGAATTTTTTGGAATCTTATAGGAAGTACAAATTTTCTTCTAGTTCGGGTTTTGATATGTTGATTCAGTATTACGTGCAAAACAAGAGGGAAATGGATGGTGTTCTGGTTATAAATCTCATGAGGGACCATGGGATTTGGCCTGAAGTTAGGACTTTAAGTGCTCTGTTAAATGCTCTTGCGAGAATTAGGAAGTTCCGCCAGGTCTTGGAACTCTTTGATACCCTTGTGAATGCGGGTGTTAAGCCTGATAGTTATATTTACACGGTGGCGGTTCGATGCTTGTGTGAATTGAAGTACTTTAGCAAGGCCAAGGAAGTAATCAATCAGGCC

Coding sequence (CDS)

GTAGAAAATGTTTTGATTCGAACTCTCGATGACTCCAGGTTGGCCTTGAGATTCTTCAATTTCTTGGGATTGCATAGGAATTTCCATCACTCCACTGCCTCATTTTGTATTTTAATTCATTCTTTGGTTCAGAGTAGTCTGTTTTGGCCTGCCTCTTCGCTTTTGCAAACCCTTTTGCTCCGTGGGCTAAACCCACTGGAGATTTTTTCGAATTTTTTGGAATCTTATAGGAAGTACAAATTTTCTTCTAGTTCGGGTTTTGATATGTTGATTCAGTATTACGTGCAAAACAAGAGGGAAATGGATGGTGTTCTGGTTATAAATCTCATGAGGGACCATGGGATTTGGCCTGAAGTTAGGACTTTAAGTGCTCTGTTAAATGCTCTTGCGAGAATTAGGAAGTTCCGCCAGGTCTTGGAACTCTTTGATACCCTTGTGAATGCGGGTGTTAAGCCTGATAGTTATATTTACACGGTGGCGGTTCGATGCTTGTGTGAATTGAAGTACTTTAGCAAGGCCAAGGAAGTAATCAATCAGGCC

Protein sequence

VENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYYVQNKREMDGVLVINLMRDHGIWPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDSYIYTVAVRCLCELKYFSKAKEVINQA

Homology

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BLAST of MC02g0785 vs. ExPASy Swiss-Prot
Match: Q9FJE6 (Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana OX=3702 GN=At5g59900 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.1e-53
Identity = 107/178 (60.11%), Postives = 136/178 (76.40%), Query Frame = 0


Query: 1   VENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLL 60
           VE +LI T+DD +L LRFFNFLGLHR F HSTASFCILIH+LV+++LFWPASSLLQTLLL
Sbjct: 73  VEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLL 132

Query: 61  RGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYYVQNKREMDGVLVINLM-RDHGIWPEV 120
           R L P ++F+     Y K K SSSS FD+LIQ+YV+++R +DGVLV  +M     + PEV
Sbjct: 133 RALKPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEV 192

Query: 121 RTLSALLNALARIRKFRQVLELFDTLVNAGVKPDSYIYTVAVRCLCELKYFSKAKEVI 178
           RTLSALL+ L + R F   +ELF+ +V+ G++PD YIYT  +R LCELK  S+AKE+I
Sbjct: 193 RTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMI 250

[Close]

BLAST of MC02g0785 vs. ExPASy Swiss-Prot
Match: P0C894 (Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis thaliana OX=3702 GN=At2g02150 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.5e-12
Identity = 42/166 (25.30%), Postives = 83/166 (50.00%), Query Frame = 0


Query: 1   VENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLL 60
           V  VL+   +D +LA +FF +      F HS  S+CI+ H L  + +++ A+S+L+ ++L
Sbjct: 111 VPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVL 170

Query: 61  RGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYYVQNKREMDGVLVINLMRDHGIWPEVR 120
              +  ++F + L S R         FD L    +      + +   + M+   ++P+ R
Sbjct: 171 SKAD-CDVF-DVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTR 230

Query: 121 TLSALLNALARIRKFRQVLELFDTLVNAGVKPDSYIYTVAVRCLCE 167
           + + LL+  A++ K   V   F  ++ AG +P  + Y + + C+C+
Sbjct: 231 SCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCK 274

[Close]

BLAST of MC02g0785 vs. ExPASy Swiss-Prot
Match: Q9CA58 (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana OX=3702 GN=At1g74580 PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.1e-08
Identity = 35/146 (23.97%), Postives = 74/146 (50.68%), Query Frame = 0


Query: 34  SFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQY 93
           +F IL++ L +      A  L++ ++ +G  P +IF+                F++LI  
Sbjct: 428 TFNILVNGLCKMGCVSDADGLVKVMISKGYFP-DIFT----------------FNILIHG 487

Query: 94  YVQNKREMDGVLVINLMRDHGIWPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPD 153
           Y    +  + + ++++M D+G+ P+V T ++LLN L +  KF  V+E + T+V  G  P+
Sbjct: 488 YSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN 547

Query: 154 SYIYTVAVRCLCELKYFSKAKEVINQ 180
            + + + +  LC  +   +A  ++ +
Sbjct: 548 LFTFNILLESLCRYRKLDEALGLLEE 556

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BLAST of MC02g0785 vs. ExPASy Swiss-Prot
Match: Q9FND8 (Pentatricopeptide repeat-containing protein At5g40400 OS=Arabidopsis thaliana OX=3702 GN=At5g40400 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.3e-06
Identity = 39/181 (21.55%), Postives = 79/181 (43.65%), Query Frame = 0


Query: 1   VENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTL-- 60
           +  VL+R   D+  A+ FF ++        +  ++C+L+H LV S  F  A   L  L  
Sbjct: 82  ISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIE 141

Query: 61  LLRGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYYVQNKREMDGVLVINLMRDHGIWPE 120
           L      +++F   + +  +  +     FDML++ Y++     +G  V   + D G    
Sbjct: 142 LTSKKEEVDVFRVLVSATDECNWDPVV-FDMLVKGYLKLGLVEEGFRVFREVLDSGFSVS 201

Query: 121 VRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDSYIYTVAVRCLCELKYFSKAKEVIN 180
           V T + LLN L ++       +++  +   G+ P++Y + +     C    F +  + + 
Sbjct: 202 VVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLE 261

[Close]

BLAST of MC02g0785 vs. ExPASy Swiss-Prot
Match: Q8S9D1 (Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana OX=3702 GN=ATC401 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.8e-06
Identity = 27/94 (28.72%), Postives = 56/94 (59.57%), Query Frame = 0


Query: 87  FDMLIQYYVQNKREMDGV-LVINLMRDHGIWPEVRTLSALLNALARIRKFRQVLELFDTL 146
           F+ LI+ ++ N  +MDGV  V++LM + G+ P+V T S L+NA + +   ++  E++  +
Sbjct: 569 FNSLIKGFL-NINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDM 628

Query: 147 VNAGVKPDSYIYTVAVRCLCELKYFSKAKEVINQ 180
           +  G+ PD + +++  +         KA++++NQ
Sbjct: 629 LEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQ 661

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BLAST of MC02g0785 vs. NCBI nr
Match: XP_022148373.1 (putative pentatricopeptide repeat-containing protein At5g59900 isoform X2 [Momordica charantia])

HSP 1 Score: 347 bits (889), Expect = 2.59e-111
Identity = 178/180 (98.89%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 1   VENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLL 60
           VENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLL
Sbjct: 72  VENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLL 131

Query: 61  RGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYYVQNKREMDGVLVINLMRDHGIWPEVR 120
           RGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYYVQNKR MDGVLVINLMRDHGIWPEVR
Sbjct: 132 RGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYYVQNKRXMDGVLVINLMRDHGIWPEVR 191

Query: 121 TLSALLNALARIRKFRQVLELFDTLVNAGVKPDSYIYTVAVRCLCELKYFSKAKEVINQA 180
           TLSALLNALARIRKFRQVLELFDTLVNAGVKPDSYIYTVAVRCLCELK FSKAKEVINQA
Sbjct: 192 TLSALLNALARIRKFRQVLELFDTLVNAGVKPDSYIYTVAVRCLCELKXFSKAKEVINQA 251

[Close]

BLAST of MC02g0785 vs. NCBI nr
Match: XP_022148372.1 (putative pentatricopeptide repeat-containing protein At5g59900 isoform X1 [Momordica charantia])

HSP 1 Score: 347 bits (889), Expect = 5.43e-111
Identity = 178/180 (98.89%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 1   VENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLL 60
           VENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLL
Sbjct: 72  VENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLL 131

Query: 61  RGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYYVQNKREMDGVLVINLMRDHGIWPEVR 120
           RGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYYVQNKR MDGVLVINLMRDHGIWPEVR
Sbjct: 132 RGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYYVQNKRXMDGVLVINLMRDHGIWPEVR 191

Query: 121 TLSALLNALARIRKFRQVLELFDTLVNAGVKPDSYIYTVAVRCLCELKYFSKAKEVINQA 180
           TLSALLNALARIRKFRQVLELFDTLVNAGVKPDSYIYTVAVRCLCELK FSKAKEVINQA
Sbjct: 192 TLSALLNALARIRKFRQVLELFDTLVNAGVKPDSYIYTVAVRCLCELKXFSKAKEVINQA 251

[Close]

BLAST of MC02g0785 vs. NCBI nr
Match: XP_004147277.1 (putative pentatricopeptide repeat-containing protein At5g59900 [Cucumis sativus])

HSP 1 Score: 315 bits (807), Expect = 7.28e-99
Identity = 159/180 (88.33%), Postives = 171/180 (95.00%), Query Frame = 0


Query: 1   VENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLL 60
           VE VLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSL+Q++LFWPASSLLQTLLL
Sbjct: 72  VEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFWPASSLLQTLLL 131

Query: 61  RGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYYVQNKREMDGVLVINLMRDHGIWPEVR 120
           RGLNP +IF NF ESY+KYKFSSSSGFDMLIQ+YVQNKR MDGVLV+NLMRD+G+ PEVR
Sbjct: 132 RGLNPHQIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVR 191

Query: 121 TLSALLNALARIRKFRQVLELFDTLVNAGVKPDSYIYTVAVRCLCELKYFSKAKEVINQA 180
           TLSALLNALARIRKFRQVLELFDTLVNAGVKPD YIYTV V+CLCELK F+KAKE+INQA
Sbjct: 192 TLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQA 251

[Close]

BLAST of MC02g0785 vs. NCBI nr
Match: XP_038901679.1 (putative pentatricopeptide repeat-containing protein At5g59900 [Benincasa hispida] >XP_038901680.1 putative pentatricopeptide repeat-containing protein At5g59900 [Benincasa hispida] >XP_038901681.1 putative pentatricopeptide repeat-containing protein At5g59900 [Benincasa hispida] >XP_038901682.1 putative pentatricopeptide repeat-containing protein At5g59900 [Benincasa hispida] >XP_038901683.1 putative pentatricopeptide repeat-containing protein At5g59900 [Benincasa hispida])

HSP 1 Score: 308 bits (789), Expect = 2.84e-96
Identity = 157/180 (87.22%), Postives = 167/180 (92.78%), Query Frame = 0


Query: 1   VENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLL 60
           VE VLIRTLDDSRLALRFFNFLGLHRNFHHS ASFCILIHSLVQ+SLFWPASSLLQTLLL
Sbjct: 72  VEKVLIRTLDDSRLALRFFNFLGLHRNFHHSAASFCILIHSLVQNSLFWPASSLLQTLLL 131

Query: 61  RGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYYVQNKREMDGVLVINLMRDHGIWPEVR 120
           RG  PLEIF N LES++KYKFSSSSGFD+LIQYYVQNKRE+D VLV+NLMR++G+ PEVR
Sbjct: 132 RGQKPLEIFENLLESHKKYKFSSSSGFDLLIQYYVQNKREIDAVLVVNLMREYGLLPEVR 191

Query: 121 TLSALLNALARIRKFRQVLELFDTLVNAGVKPDSYIYTVAVRCLCELKYFSKAKEVINQA 180
           TLSALLNALARIRKF QVLELFDTLVNAGVKPDSYIYTV VRC CELK F KAKE+INQA
Sbjct: 192 TLSALLNALARIRKFCQVLELFDTLVNAGVKPDSYIYTVVVRCFCELKDFDKAKEIINQA 251

[Close]

BLAST of MC02g0785 vs. NCBI nr
Match: XP_022944483.1 (putative pentatricopeptide repeat-containing protein At5g59900 isoform X2 [Cucurbita moschata])

HSP 1 Score: 308 bits (788), Expect = 4.06e-96
Identity = 153/180 (85.00%), Postives = 169/180 (93.89%), Query Frame = 0


Query: 1   VENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLL 60
           VE VL+RT DDSRLALRFFNF+GLHRNFHHSTASFCILIHSLVQ+SLFWPASSLL T+LL
Sbjct: 72  VEKVLVRTRDDSRLALRFFNFMGLHRNFHHSTASFCILIHSLVQNSLFWPASSLLHTVLL 131

Query: 61  RGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYYVQNKREMDGVLVINLMRDHGIWPEVR 120
           RGLNP+EIF N LESY++YKFSSSSGFDMLIQYYVQNKRE DGVL+INLMRD+G++PEVR
Sbjct: 132 RGLNPVEIFDNLLESYKRYKFSSSSGFDMLIQYYVQNKRERDGVLIINLMRDYGLFPEVR 191

Query: 121 TLSALLNALARIRKFRQVLELFDTLVNAGVKPDSYIYTVAVRCLCELKYFSKAKEVINQA 180
           TLSALLNALARIRKF QVLELFD LVNAGVKPD+YIYTV V+CLCELK F+KA ++INQA
Sbjct: 192 TLSALLNALARIRKFCQVLELFDALVNAGVKPDNYIYTVVVKCLCELKDFNKANDIINQA 251

[Close]

BLAST of MC02g0785 vs. ExPASy TrEMBL
Match: A0A6J1D3X3 (putative pentatricopeptide repeat-containing protein At5g59900 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111017039 PE=4 SV=1)

HSP 1 Score: 347 bits (889), Expect = 1.25e-111
Identity = 178/180 (98.89%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 1   VENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLL 60
           VENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLL
Sbjct: 72  VENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLL 131

Query: 61  RGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYYVQNKREMDGVLVINLMRDHGIWPEVR 120
           RGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYYVQNKR MDGVLVINLMRDHGIWPEVR
Sbjct: 132 RGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYYVQNKRXMDGVLVINLMRDHGIWPEVR 191

Query: 121 TLSALLNALARIRKFRQVLELFDTLVNAGVKPDSYIYTVAVRCLCELKYFSKAKEVINQA 180
           TLSALLNALARIRKFRQVLELFDTLVNAGVKPDSYIYTVAVRCLCELK FSKAKEVINQA
Sbjct: 192 TLSALLNALARIRKFRQVLELFDTLVNAGVKPDSYIYTVAVRCLCELKXFSKAKEVINQA 251

[Close]

BLAST of MC02g0785 vs. ExPASy TrEMBL
Match: A0A6J1D4W4 (putative pentatricopeptide repeat-containing protein At5g59900 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017039 PE=4 SV=1)

HSP 1 Score: 347 bits (889), Expect = 2.63e-111
Identity = 178/180 (98.89%), Postives = 178/180 (98.89%), Query Frame = 0


Query: 1   VENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLL 60
           VENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLL
Sbjct: 72  VENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLL 131

Query: 61  RGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYYVQNKREMDGVLVINLMRDHGIWPEVR 120
           RGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYYVQNKR MDGVLVINLMRDHGIWPEVR
Sbjct: 132 RGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYYVQNKRXMDGVLVINLMRDHGIWPEVR 191

Query: 121 TLSALLNALARIRKFRQVLELFDTLVNAGVKPDSYIYTVAVRCLCELKYFSKAKEVINQA 180
           TLSALLNALARIRKFRQVLELFDTLVNAGVKPDSYIYTVAVRCLCELK FSKAKEVINQA
Sbjct: 192 TLSALLNALARIRKFRQVLELFDTLVNAGVKPDSYIYTVAVRCLCELKXFSKAKEVINQA 251

[Close]

BLAST of MC02g0785 vs. ExPASy TrEMBL
Match: A0A0A0LVC6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G096070 PE=4 SV=1)

HSP 1 Score: 315 bits (807), Expect = 3.52e-99
Identity = 159/180 (88.33%), Postives = 171/180 (95.00%), Query Frame = 0


Query: 1   VENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLL 60
           VE VLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSL+Q++LFWPASSLLQTLLL
Sbjct: 72  VEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFWPASSLLQTLLL 131

Query: 61  RGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYYVQNKREMDGVLVINLMRDHGIWPEVR 120
           RGLNP +IF NF ESY+KYKFSSSSGFDMLIQ+YVQNKR MDGVLV+NLMRD+G+ PEVR
Sbjct: 132 RGLNPHQIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVR 191

Query: 121 TLSALLNALARIRKFRQVLELFDTLVNAGVKPDSYIYTVAVRCLCELKYFSKAKEVINQA 180
           TLSALLNALARIRKFRQVLELFDTLVNAGVKPD YIYTV V+CLCELK F+KAKE+INQA
Sbjct: 192 TLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQA 251

[Close]

BLAST of MC02g0785 vs. ExPASy TrEMBL
Match: A0A6J1FY36 (putative pentatricopeptide repeat-containing protein At5g59900 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448927 PE=4 SV=1)

HSP 1 Score: 308 bits (788), Expect = 1.96e-96
Identity = 153/180 (85.00%), Postives = 169/180 (93.89%), Query Frame = 0


Query: 1   VENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLL 60
           VE VL+RT DDSRLALRFFNF+GLHRNFHHSTASFCILIHSLVQ+SLFWPASSLL T+LL
Sbjct: 72  VEKVLVRTRDDSRLALRFFNFMGLHRNFHHSTASFCILIHSLVQNSLFWPASSLLHTVLL 131

Query: 61  RGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYYVQNKREMDGVLVINLMRDHGIWPEVR 120
           RGLNP+EIF N LESY++YKFSSSSGFDMLIQYYVQNKRE DGVL+INLMRD+G++PEVR
Sbjct: 132 RGLNPVEIFDNLLESYKRYKFSSSSGFDMLIQYYVQNKRERDGVLIINLMRDYGLFPEVR 191

Query: 121 TLSALLNALARIRKFRQVLELFDTLVNAGVKPDSYIYTVAVRCLCELKYFSKAKEVINQA 180
           TLSALLNALARIRKF QVLELFD LVNAGVKPD+YIYTV V+CLCELK F+KA ++INQA
Sbjct: 192 TLSALLNALARIRKFCQVLELFDALVNAGVKPDNYIYTVVVKCLCELKDFNKANDIINQA 251

[Close]

BLAST of MC02g0785 vs. ExPASy TrEMBL
Match: A0A6J1FVS2 (putative pentatricopeptide repeat-containing protein At5g59900 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448927 PE=4 SV=1)

HSP 1 Score: 308 bits (788), Expect = 2.18e-96
Identity = 153/180 (85.00%), Postives = 169/180 (93.89%), Query Frame = 0


Query: 1   VENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLL 60
           VE VL+RT DDSRLALRFFNF+GLHRNFHHSTASFCILIHSLVQ+SLFWPASSLL T+LL
Sbjct: 72  VEKVLVRTRDDSRLALRFFNFMGLHRNFHHSTASFCILIHSLVQNSLFWPASSLLHTVLL 131

Query: 61  RGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYYVQNKREMDGVLVINLMRDHGIWPEVR 120
           RGLNP+EIF N LESY++YKFSSSSGFDMLIQYYVQNKRE DGVL+INLMRD+G++PEVR
Sbjct: 132 RGLNPVEIFDNLLESYKRYKFSSSSGFDMLIQYYVQNKRERDGVLIINLMRDYGLFPEVR 191

Query: 121 TLSALLNALARIRKFRQVLELFDTLVNAGVKPDSYIYTVAVRCLCELKYFSKAKEVINQA 180
           TLSALLNALARIRKF QVLELFD LVNAGVKPD+YIYTV V+CLCELK F+KA ++INQA
Sbjct: 192 TLSALLNALARIRKFCQVLELFDALVNAGVKPDNYIYTVVVKCLCELKDFNKANDIINQA 251

[Close]

BLAST of MC02g0785 vs. TAIR 10
Match: AT5G59900.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 211.1 bits (536), Expect = 7.5e-55
Identity = 107/178 (60.11%), Postives = 136/178 (76.40%), Query Frame = 0


Query: 1   VENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLL 60
           VE +LI T+DD +L LRFFNFLGLHR F HSTASFCILIH+LV+++LFWPASSLLQTLLL
Sbjct: 73  VEEILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLL 132

Query: 61  RGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYYVQNKREMDGVLVINLM-RDHGIWPEV 120
           R L P ++F+     Y K K SSSS FD+LIQ+YV+++R +DGVLV  +M     + PEV
Sbjct: 133 RALKPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEV 192

Query: 121 RTLSALLNALARIRKFRQVLELFDTLVNAGVKPDSYIYTVAVRCLCELKYFSKAKEVI 178
           RTLSALL+ L + R F   +ELF+ +V+ G++PD YIYT  +R LCELK  S+AKE+I
Sbjct: 193 RTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMI 250

[Close]

BLAST of MC02g0785 vs. TAIR 10
Match: AT2G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 72.8 bits (177), Expect = 3.2e-13
Identity = 42/166 (25.30%), Postives = 83/166 (50.00%), Query Frame = 0


Query: 1   VENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTLLL 60
           V  VL+   +D +LA +FF +      F HS  S+CI+ H L  + +++ A+S+L+ ++L
Sbjct: 111 VPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVL 170

Query: 61  RGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYYVQNKREMDGVLVINLMRDHGIWPEVR 120
              +  ++F + L S R         FD L    +      + +   + M+   ++P+ R
Sbjct: 171 SKAD-CDVF-DVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTR 230

Query: 121 TLSALLNALARIRKFRQVLELFDTLVNAGVKPDSYIYTVAVRCLCE 167
           + + LL+  A++ K   V   F  ++ AG +P  + Y + + C+C+
Sbjct: 231 SCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCK 274

[Close]

BLAST of MC02g0785 vs. TAIR 10
Match: AT1G74580.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 3.7e-09
Identity = 35/146 (23.97%), Postives = 74/146 (50.68%), Query Frame = 0


Query: 34  SFCILIHSLVQSSLFWPASSLLQTLLLRGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQY 93
           +F IL++ L +      A  L++ ++ +G  P +IF+                F++LI  
Sbjct: 428 TFNILVNGLCKMGCVSDADGLVKVMISKGYFP-DIFT----------------FNILIHG 487

Query: 94  YVQNKREMDGVLVINLMRDHGIWPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPD 153
           Y    +  + + ++++M D+G+ P+V T ++LLN L +  KF  V+E + T+V  G  P+
Sbjct: 488 YSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPN 547

Query: 154 SYIYTVAVRCLCELKYFSKAKEVINQ 180
            + + + +  LC  +   +A  ++ +
Sbjct: 548 LFTFNILLESLCRYRKLDEALGLLEE 556

[Close]

BLAST of MC02g0785 vs. TAIR 10
Match: AT5G40400.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 54.7 bits (130), Expect = 9.0e-08
Identity = 39/181 (21.55%), Postives = 79/181 (43.65%), Query Frame = 0


Query: 1   VENVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLVQSSLFWPASSLLQTL-- 60
           +  VL+R   D+  A+ FF ++        +  ++C+L+H LV S  F  A   L  L  
Sbjct: 82  ISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIE 141

Query: 61  LLRGLNPLEIFSNFLESYRKYKFSSSSGFDMLIQYYVQNKREMDGVLVINLMRDHGIWPE 120
           L      +++F   + +  +  +     FDML++ Y++     +G  V   + D G    
Sbjct: 142 LTSKKEEVDVFRVLVSATDECNWDPVV-FDMLVKGYLKLGLVEEGFRVFREVLDSGFSVS 201

Query: 121 VRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDSYIYTVAVRCLCELKYFSKAKEVIN 180
           V T + LLN L ++       +++  +   G+ P++Y + +     C    F +  + + 
Sbjct: 202 VVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLE 261

[Close]

BLAST of MC02g0785 vs. TAIR 10
Match: AT5G21222.1 (protein kinase family protein )

HSP 1 Score: 52.8 bits (125), Expect = 3.4e-07
Identity = 27/94 (28.72%), Postives = 56/94 (59.57%), Query Frame = 0


Query: 87  FDMLIQYYVQNKREMDGV-LVINLMRDHGIWPEVRTLSALLNALARIRKFRQVLELFDTL 146
           F+ LI+ ++ N  +MDGV  V++LM + G+ P+V T S L+NA + +   ++  E++  +
Sbjct: 569 FNSLIKGFL-NINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDM 628

Query: 147 VNAGVKPDSYIYTVAVRCLCELKYFSKAKEVINQ 180
           +  G+ PD + +++  +         KA++++NQ
Sbjct: 629 LEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQ 661

The following BLAST results are available for this feature:

BLAST of MC02g0785 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJE6	1.1e-53	60.11	Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis th...	[more]
P0C894	4.5e-12	25.30	Putative pentatricopeptide repeat-containing protein At2g02150 OS=Arabidopsis th...	[more]
Q9CA58	5.1e-08	23.97	Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th...	[more]
Q9FND8	1.3e-06	21.55	Pentatricopeptide repeat-containing protein At5g40400 OS=Arabidopsis thaliana OX...	[more]
Q8S9D1	4.8e-06	28.72	Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana OX...	[more]

BLAST of MC02g0785 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148373.1	2.59e-111	98.89	putative pentatricopeptide repeat-containing protein At5g59900 isoform X2 [Momor...	[more]
XP_022148372.1	5.43e-111	98.89	putative pentatricopeptide repeat-containing protein At5g59900 isoform X1 [Momor...	[more]
XP_004147277.1	7.28e-99	88.33	putative pentatricopeptide repeat-containing protein At5g59900 [Cucumis sativus]	[more]
XP_038901679.1	2.84e-96	87.22	putative pentatricopeptide repeat-containing protein At5g59900 [Benincasa hispid...	[more]
XP_022944483.1	4.06e-96	85.00	putative pentatricopeptide repeat-containing protein At5g59900 isoform X2 [Cucur...	[more]

BLAST of MC02g0785 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D3X3	1.25e-111	98.89	putative pentatricopeptide repeat-containing protein At5g59900 isoform X2 OS=Mom...	[more]
A0A6J1D4W4	2.63e-111	98.89	putative pentatricopeptide repeat-containing protein At5g59900 isoform X1 OS=Mom...	[more]
A0A0A0LVC6	3.52e-99	88.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G096070 PE=4 SV=1	[more]
A0A6J1FY36	1.96e-96	85.00	putative pentatricopeptide repeat-containing protein At5g59900 isoform X2 OS=Cuc...	[more]
A0A6J1FVS2	2.18e-96	85.00	putative pentatricopeptide repeat-containing protein At5g59900 isoform X1 OS=Cuc...	[more]

BLAST of MC02g0785 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59900.1	7.5e-55	60.11	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G02150.1	3.2e-13	25.30	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G74580.1	3.7e-09	23.97	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G40400.1	9.0e-08	21.55	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G21222.1	3.4e-07	28.72	protein kinase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 121..150 e-value: 0.13 score: 12.5
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 121..154 e-value: 1.1E-4 score: 20.1
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 118..152 score: 9.832344
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 3..180 e-value: 1.9E-19 score: 71.9
None	No IPR available	PANTHER	PTHR45613:SF62	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 1..178
None	No IPR available	PANTHER	PTHR45613	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 1..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g0785.1	MC02g0785.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding