MC02g0710 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC02g0710
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionselT-like protein
LocationMC02: 5727985 .. 5728284 (-)
RNA-Seq ExpressionMC02g0710
SyntenyMC02g0710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCGAAGAGTGTTGCTTCTGACATTGCTGCCGCTCTCTGTCTTCTGCTTCGACATCTACAGTTTCTTCTCTACTCCGCCTCCGAAATCATCCAATTCTCTCGTCTTTCATCATCCACACGGAGCCAATTTGAATCAGACATTTACAGCCAAATTGAACCAAACGCTTACAGCCAATTTGAATCGAACACTTGGAGCCGATTTGAACCGGACACAATCGGGGAGTTCGAATCAGACGCAAACAGCCAACGTAGGCGATACGATTCTCATCAAATTCAGCTCTCTGTGCTCTTACAGG

mRNA sequence

ATGGATCGAAGAGTGTTGCTTCTGACATTGCTGCCGCTCTCTGTCTTCTGCTTCGACATCTACAGTTTCTTCTCTACTCCGCCTCCGAAATCATCCAATTCTCTCGTCTTTCATCATCCACACGGAGCCAATTTGAATCAGACATTTACAGCCAAATTGAACCAAACGCTTACAGCCAATTTGAATCGAACACTTGGAGCCGATTTGAACCGGACACAATCGGGGAGTTCGAATCAGACGCAAACAGCCAACGTAGGCGATACGATTCTCATCAAATTCAGCTCTCTGTGCTCTTACAGG

Coding sequence (CDS)

ATGGATCGAAGAGTGTTGCTTCTGACATTGCTGCCGCTCTCTGTCTTCTGCTTCGACATCTACAGTTTCTTCTCTACTCCGCCTCCGAAATCATCCAATTCTCTCGTCTTTCATCATCCACACGGAGCCAATTTGAATCAGACATTTACAGCCAAATTGAACCAAACGCTTACAGCCAATTTGAATCGAACACTTGGAGCCGATTTGAACCGGACACAATCGGGGAGTTCGAATCAGACGCAAACAGCCAACGTAGGCGATACGATTCTCATCAAATTCAGCTCTCTGTGCTCTTACAGG

Protein sequence

MDRRVLLLTLLPLSVFCFDIYSFFSTPPPKSSNSLVFHHPHGANLNQTFTAKLNQTLTANLNRTLGADLNRTQSGSSNQTQTANVGDTILIKFSSLCSYR
Homology
[Close]
BLAST of MC02g0710 vs. NCBI nr
Match: XP_022148433.1 (selT-like protein [Momordica charantia])

HSP 1 Score: 194 bits (493), Expect = 1.84e-60
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0 

Query: 1   MDRRVLLLTLLPLSVFCFDIYSFFSTPPPKSSNSLVFHHPHGANLNQTFTAKLNQTLTAN 60
           MDRRVLLLTLLPLSVFCFDIY FFSTPPPKSSNSLVFHHPHGANLNQTFTAKLNQTLTAN
Sbjct: 1   MDRRVLLLTLLPLSVFCFDIYXFFSTPPPKSSNSLVFHHPHGANLNQTFTAKLNQTLTAN 60

Query: 61  LNRTLGADLNRTQSGSSNQTQTANVGDTILIKFSSLCSYR 100
           LNRTLGADLNRTQSGSSNQTQTANVGDTILIKFSSLCSYR
Sbjct: 61  LNRTLGADLNRTQSGSSNQTQTANVGDTILIKFSSLCSYR 100

[Close]
BLAST of MC02g0710 vs. NCBI nr
Match: OVA02711.1 (Selenoprotein [Macleaya cordata])

HSP 1 Score: 51.6 bits (122), Expect = 4.28e-05
Identity = 40/100 (40.00%), Postives = 48/100 (48.00%), Query Frame = 0 

Query: 1   MDRRVLLLTLLPLSVFCFDIYSFFSTPPPKSSNSLVFHHPHGANLNQTFTAKLNQTLTAN 60
           MDR  +LL  LPL +FC D+ +FF+ PPPKSS     HH H  N +Q     + QTL   
Sbjct: 1   MDRVQILLIGLPLFLFCSDLLNFFTPPPPKSSQGHHHHHHHHHN-HQQQQPPIQQTL--- 60

Query: 61  LNRTLGADLNRTQSGSSNQTQTANVGDTILIKFSSLCSYR 100
                  DL     G+         G TI I F S CSYR
Sbjct: 61  -------DLPTKTIGNGG----IGYGTTIKINFCSSCSYR 85

[Close]
BLAST of MC02g0710 vs. NCBI nr
Match: XP_042508242.1 (selT-like protein isoform X2 [Macadamia integrifolia])

HSP 1 Score: 47.0 bits (110), Expect = 7.18e-04
Identity = 34/100 (34.00%), Postives = 47/100 (47.00%), Query Frame = 0 

Query: 1   MDRRVLLLTLLPLSVFCFDIYSFFSTPPPKSSNSLVFHHPHGANLNQTFTAKLNQTLTAN 60
           MDR  ++L  LPL +FC D+ + F+ PPPK S     HH H  +  Q     + Q L   
Sbjct: 34  MDRVQMILLGLPLFLFCSDLLNLFTVPPPKPSGHQHHHHHHHGHHPQQ--PPVQQNLEFP 93

Query: 61  LNRTLGADLNRTQSGSSNQTQTANVGDTILIKFSSLCSYR 100
           + +++GA                  G+TI I F S CSYR
Sbjct: 94  IQKSVGAG-------------GIGYGNTININFCSSCSYR 118

[Close]
BLAST of MC02g0710 vs. NCBI nr
Match: CAA2980256.1 (Hypothetical predicted protein [Olea europaea subsp. europaea])

HSP 1 Score: 48.1 bits (113), Expect = 7.73e-04
Identity = 34/100 (34.00%), Postives = 47/100 (47.00%), Query Frame = 0 

Query: 1   MDRRVLLLTLLPLSVFCFDIYSFFSTPPPKSSNSLVFHHPHGANLNQTFTAKLNQTLTAN 60
           MDR  LLL  LPL +FC DI S FS PP K + + + HH H  + + +      Q   ++
Sbjct: 1   MDRAQLLLVGLPLFLFCSDIVSLFSPPPAKPATTPLHHHHHHHHQSNSPPLIQQQQQQSS 60

Query: 61  LNRTLGADLNRTQSGSSNQTQTANVGDTILIKFSSLCSYR 100
           L               S +     +G+T+ I F S CSYR
Sbjct: 61  L------------EFPSQKASGIGIGNTVKIDFCSSCSYR 88

[Close]
BLAST of MC02g0710 vs. NCBI nr
Match: XP_022880993.1 (selT-like protein [Olea europaea var. sylvestris])

HSP 1 Score: 48.1 bits (113), Expect = 7.73e-04
Identity = 34/100 (34.00%), Postives = 47/100 (47.00%), Query Frame = 0 

Query: 1   MDRRVLLLTLLPLSVFCFDIYSFFSTPPPKSSNSLVFHHPHGANLNQTFTAKLNQTLTAN 60
           MDR  LLL  LPL +FC DI S FS PP K + + + HH H  + + +      Q   ++
Sbjct: 1   MDRAQLLLVGLPLFLFCSDIVSLFSPPPAKPATTPLHHHHHHHHQSNSPPLIQQQQQQSS 60

Query: 61  LNRTLGADLNRTQSGSSNQTQTANVGDTILIKFSSLCSYR 100
           L               S +     +G+T+ I F S CSYR
Sbjct: 61  L------------EFPSQKASGIGIGNTVKIDFCSSCSYR 88

[Close]
BLAST of MC02g0710 vs. ExPASy TrEMBL
Match: A0A6J1D431 (selT-like protein OS=Momordica charantia OX=3673 GN=LOC111017081 PE=4 SV=1)

HSP 1 Score: 194 bits (493), Expect = 8.89e-61
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0 

Query: 1   MDRRVLLLTLLPLSVFCFDIYSFFSTPPPKSSNSLVFHHPHGANLNQTFTAKLNQTLTAN 60
           MDRRVLLLTLLPLSVFCFDIY FFSTPPPKSSNSLVFHHPHGANLNQTFTAKLNQTLTAN
Sbjct: 1   MDRRVLLLTLLPLSVFCFDIYXFFSTPPPKSSNSLVFHHPHGANLNQTFTAKLNQTLTAN 60

Query: 61  LNRTLGADLNRTQSGSSNQTQTANVGDTILIKFSSLCSYR 100
           LNRTLGADLNRTQSGSSNQTQTANVGDTILIKFSSLCSYR
Sbjct: 61  LNRTLGADLNRTQSGSSNQTQTANVGDTILIKFSSLCSYR 100

[Close]
BLAST of MC02g0710 vs. ExPASy TrEMBL
Match: A0A200PWW3 (Selenoprotein OS=Macleaya cordata OX=56857 GN=BVC80_9093g54 PE=4 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.07e-05
Identity = 40/100 (40.00%), Postives = 48/100 (48.00%), Query Frame = 0 

Query: 1   MDRRVLLLTLLPLSVFCFDIYSFFSTPPPKSSNSLVFHHPHGANLNQTFTAKLNQTLTAN 60
           MDR  +LL  LPL +FC D+ +FF+ PPPKSS     HH H  N +Q     + QTL   
Sbjct: 1   MDRVQILLIGLPLFLFCSDLLNFFTPPPPKSSQGHHHHHHHHHN-HQQQQPPIQQTL--- 60

Query: 61  LNRTLGADLNRTQSGSSNQTQTANVGDTILIKFSSLCSYR 100
                  DL     G+         G TI I F S CSYR
Sbjct: 61  -------DLPTKTIGNGG----IGYGTTIKINFCSSCSYR 85

[Close]
BLAST of MC02g0710 vs. ExPASy TrEMBL
Match: A0A2R6RXE6 (SelT-like protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc01797 PE=4 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 9.91e-04
Identity = 35/104 (33.65%), Postives = 47/104 (45.19%), Query Frame = 0 

Query: 1   MDRRVLLLTLLPLSVFCFDIYSFFST----PPPKSSNSLVFHHPHGANLNQTFTAKLNQT 60
           MDR  +LL  LPL +FC DI + F++    PPPK  +    HH H  N        + QT
Sbjct: 1   MDRAQILLVGLPLFLFCSDIINLFASSPPPPPPKPHHHHHHHHHHDDNHRSQPQPVVQQT 60

Query: 61  LTANLNRTLGADLNRTQSGSSNQTQTANVGDTILIKFSSLCSYR 100
           L     +++G                  VG+T+ I F S CSYR
Sbjct: 61  LDFPTQKSIGIG-------------AIGVGNTVNINFCSSCSYR 91

The following BLAST results are available for this feature:
BLAST of MC02g0710 vs.
Match NameE-valueIdentityDescription
BLAST of MC02g0710 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022148433.11.84e-6099.00selT-like protein [Momordica charantia][more]
OVA02711.14.28e-0540.00Selenoprotein [Macleaya cordata][more]
XP_042508242.17.18e-0434.00selT-like protein isoform X2 [Macadamia integrifolia][more]
CAA2980256.17.73e-0434.00Hypothetical predicted protein [Olea europaea subsp. europaea][more]
XP_022880993.17.73e-0434.00selT-like protein [Olea europaea var. sylvestris][more]
BLAST of MC02g0710 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D4318.89e-6199.00selT-like protein OS=Momordica charantia OX=3673 GN=LOC111017081 PE=4 SV=1[more]
A0A200PWW32.07e-0540.00Selenoprotein OS=Macleaya cordata OX=56857 GN=BVC80_9093g54 PE=4 SV=1[more]
A0A2R6RXE69.91e-0433.65SelT-like protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc0... [more]
BLAST of MC02g0710 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC02g0710.1MC02g0710.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane