MC02g0648 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC02g0648
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionSec14p-like phosphatidylinositol transfer family protein
LocationMC02: 5222932 .. 5223105 (-)
RNA-Seq ExpressionMC02g0648
SyntenyMC02g0648
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTGTCGGGGCCACCGAGCTGGGTGACGGCGTCGACGAAGCGCTCGTGGAGCTCGACGGTCCAGCGGAGACGGGGCTTGGGGTCGGTGGTGAGGACGAGGCCGGAGTCGGCTTGGACGCACATTGGCCTGTCATTGATAGAGGAGGGTTTCTTGGGGGCATGGAACATTCTGAA

mRNA sequence

ACTGTCGGGGCCACCGAGCTGGGTGACGGCGTCGACGAAGCGCTCGTGGAGCTCGACGGTCCAGCGGAGACGGGGCTTGGGGTCGGTGGTGAGGACGAGGCCGGAGTCGGCTTGGACGCACATTGGCCTGTCATTGATAGAGGAGGGTTTCTTGGGGGCATGGAACATTCTGAA

Coding sequence (CDS)

ACTGTCGGGGCCACCGAGCTGGGTGACGGCGTCGACGAAGCGCTCGTGGAGCTCGACGGTCCAGCGGAGACGGGGCTTGGGGTCGGTGGTGAGGACGAGGCCGGAGTCGGCTTGGACGCACATTGGCCTGTCATTGATAGAGGAGGGTTTCTTGGGGGCATGGAACATTCTGAA

Protein sequence

TVGATELGDGVDEALVELDGPAETGLGVGGEDEAGVGLDAHWPVIDRGGFLGGMEHSE
Homology
[Close]
BLAST of MC02g0648 vs. NCBI nr
Match: GER47657.1 (Sec14p-like phosphatidylinositol transfer family protein [Striga asiatica])

HSP 1 Score: 52.8 bits (125), Expect = 3.96e-06
Identity = 25/34 (73.53%), Postives = 30/34 (88.24%), Query Frame = 0 

Query: 1  TVGATELGDGVDEALVELDGPAETGLGVGGEDEA 34
          TVGATELGDG+ +ALVEL+ P+E G GVGGED+A
Sbjct: 13 TVGATELGDGIYKALVELNSPSEAGFGVGGEDKA 46

[Close]
BLAST of MC02g0648 vs. NCBI nr
Match: CAN62026.1 (hypothetical protein VITISV_005440 [Vitis vinifera])

HSP 1 Score: 49.3 bits (116), Expect = 2.96e-05
Identity = 21/36 (58.33%), Postives = 31/36 (86.11%), Query Frame = 0 

Query: 1  TVGATELGDGVDEALVELDGPAETGLGVGGEDEAGV 36
          T+GATEL + ++++LVEL GPAE GLG+GGE++A +
Sbjct: 41 TIGATELSNSINKSLVELGGPAEAGLGIGGENQASI 76

[Close]
BLAST of MC02g0648 vs. ExPASy TrEMBL
Match: A0A5A7QTA6 (Sec14p-like phosphatidylinositol transfer family protein OS=Striga asiatica OX=4170 GN=STAS_24775 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.92e-06
Identity = 25/34 (73.53%), Postives = 30/34 (88.24%), Query Frame = 0 

Query: 1  TVGATELGDGVDEALVELDGPAETGLGVGGEDEA 34
          TVGATELGDG+ +ALVEL+ P+E G GVGGED+A
Sbjct: 13 TVGATELGDGIYKALVELNSPSEAGFGVGGEDKA 46

[Close]
BLAST of MC02g0648 vs. ExPASy TrEMBL
Match: A5C2D0 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_005440 PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 1.43e-05
Identity = 21/36 (58.33%), Postives = 31/36 (86.11%), Query Frame = 0 

Query: 1  TVGATELGDGVDEALVELDGPAETGLGVGGEDEAGV 36
          T+GATEL + ++++LVEL GPAE GLG+GGE++A +
Sbjct: 41 TIGATELSNSINKSLVELGGPAEAGLGIGGENQASI 76

The following BLAST results are available for this feature:
BLAST of MC02g0648 vs.
Match NameE-valueIdentityDescription
BLAST of MC02g0648 vs. NCBI nr
Match NameE-valueIdentityDescription
GER47657.13.96e-0673.53Sec14p-like phosphatidylinositol transfer family protein [Striga asiatica][more]
CAN62026.12.96e-0558.33hypothetical protein VITISV_005440 [Vitis vinifera][more]
BLAST of MC02g0648 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7QTA61.92e-0673.53Sec14p-like phosphatidylinositol transfer family protein OS=Striga asiatica OX=4... [more]
A5C2D01.43e-0558.33Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_005440 PE=4 SV=1[more]
BLAST of MC02g0648 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC02g0648.1MC02g0648.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane