MC02g0591 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC02g0591
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionProtein RALF-like 17
LocationMC02: 4768620 .. 4768979 (+)
RNA-Seq ExpressionMC02g0591
SyntenyMC02g0591
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGTTTTCAGACGGGCGGCTCTTCTCTGCCTCGGAACAATCCTCCTCTGTTTCCTCTTCGCCGGAGCCGCGGCCTCCGATTCCGACTACGGCGACGACATCCACACCGTCCGGCACTCCTCCAACTCCGGCGCCGCCCTCGACGACTGCAAATCGGATCAGCAGGACAAAGGCGACCAATGCAGGGAGGAAAACGACATCGTCGGAGACGACGATTTCGACGACACCTACAAGATCGTCAACAACATTCCCCTGTCTCTATCGGCGGCCGGCAAGATTCTAAAAGAGGCCGAGGAATCGGACCAGGCTCCCGCCTCCGAGGAAGAACTCGGCAATAACCTCTCCATACTCGGCCAC

mRNA sequence

ATGGCTGTTTTCAGACGGGCGGCTCTTCTCTGCCTCGGAACAATCCTCCTCTGTTTCCTCTTCGCCGGAGCCGCGGCCTCCGATTCCGACTACGGCGACGACATCCACACCGTCCGGCACTCCTCCAACTCCGGCGCCGCCCTCGACGACTGCAAATCGGATCAGCAGGACAAAGGCGACCAATGCAGGGAGGAAAACGACATCGTCGGAGACGACGATTTCGACGACACCTACAAGATCGTCAACAACATTCCCCTGTCTCTATCGGCGGCCGGCAAGATTCTAAAAGAGGCCGAGGAATCGGACCAGGCTCCCGCCTCCGAGGAAGAACTCGGCAATAACCTCTCCATACTCGGCCAC

Coding sequence (CDS)

ATGGCTGTTTTCAGACGGGCGGCTCTTCTCTGCCTCGGAACAATCCTCCTCTGTTTCCTCTTCGCCGGAGCCGCGGCCTCCGATTCCGACTACGGCGACGACATCCACACCGTCCGGCACTCCTCCAACTCCGGCGCCGCCCTCGACGACTGCAAATCGGATCAGCAGGACAAAGGCGACCAATGCAGGGAGGAAAACGACATCGTCGGAGACGACGATTTCGACGACACCTACAAGATCGTCAACAACATTCCCCTGTCTCTATCGGCGGCCGGCAAGATTCTAAAAGAGGCCGAGGAATCGGACCAGGCTCCCGCCTCCGAGGAAGAACTCGGCAATAACCTCTCCATACTCGGCCAC

Protein sequence

MAVFRRAALLCLGTILLCFLFAGAAASDSDYGDDIHTVRHSSNSGAALDDCKSDQQDKGDQCREENDIVGDDDFDDTYKIVNNIPLSLSAAGKILKEAEESDQAPASEEELGNNLSILGH
Homology
BLAST of MC02g0591 vs. NCBI nr
Match: KAG6570557.1 (hypothetical protein SDJN03_29472, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 144 bits (364), Expect = 4.62e-42
Identity = 80/120 (66.67%), Postives = 92/120 (76.67%), Query Frame = 0

Query: 1   MAVFRRAALLCLGTILLCFLFAGAAASDSDYGDDIHTVRHSSNSGAALDDCKSDQQDKGD 60
           MAV RR ALL LGTILLC LF  AA ++SDYGDDIHTVRHSS+S    D+C  +Q  KGD
Sbjct: 1   MAVSRRLALLSLGTILLCLLFTRAAIAESDYGDDIHTVRHSSDS----DNCNREQPYKGD 60

Query: 61  QCREENDIVGDDDFDDTYKIVNNIPLSLSAAGKILKEAEESDQAPASEEELGNNLSILGH 120
           QCREEND V D+DFDDTYKIVNN+ + LSA+G  L+EAEE D  P  EEE+  NLSI+GH
Sbjct: 61  QCREENDGVEDEDFDDTYKIVNNVAIRLSASGSKLREAEEEDDLPVPEEEI-RNLSIVGH 115

BLAST of MC02g0591 vs. NCBI nr
Match: KAA0054503.1 (hypothetical protein E6C27_scaffold24G002830 [Cucumis melo var. makuwa] >TYK14536.1 hypothetical protein E5676_scaffold552G00150 [Cucumis melo var. makuwa])

HSP 1 Score: 135 bits (339), Expect = 3.13e-38
Identity = 77/122 (63.11%), Postives = 94/122 (77.05%), Query Frame = 0

Query: 1   MAVFRRAAL-LCLGTILLCFLFAGAAASDSDYGDDIHTVRHSSNSGAALDDCKSDQQDKG 60
           MA+ RR AL L LGTIL  FLF   +A+ SDYG+DIHTVRH S++     DCK +  DKG
Sbjct: 1   MAISRRLALILSLGTILFSFLFTRVSAAGSDYGNDIHTVRHPSDTA----DCKREHLDKG 60

Query: 61  DQCREENDIVGDDDFDDTYKIVNNIPLSLSAAGKILK-EAEESDQAPASEEELGNNLSIL 120
           DQCRE+ND+  DDDFDDTYKIVNNI ++LSA+G IL+ +AEESD  P+SEEE+GN L I+
Sbjct: 61  DQCREDNDLFEDDDFDDTYKIVNNIAITLSASGSILQPDAEESDDIPSSEEEIGNML-IV 117

BLAST of MC02g0591 vs. NCBI nr
Match: KAE8646929.1 (hypothetical protein Csa_021071 [Cucumis sativus])

HSP 1 Score: 129 bits (325), Expect = 5.33e-32
Identity = 74/118 (62.71%), Postives = 91/118 (77.12%), Query Frame = 0

Query: 1   MAVFRRAAL-LCLGTILLCFLFAG-AAASDSDYGDDIHTVRHSSNSGAALDDCKSDQQDK 60
           MA+ RR  L L LGTIL CFLF G +AA+  DYGDDIHTV+H S++     +CK +  DK
Sbjct: 1   MAISRRLPLILTLGTILFCFLFIGVSAAAGPDYGDDIHTVKHPSDTA----ECKREHLDK 60

Query: 61  GDQCREENDIVGDDDFDDTYKIVNNIPLSLSAAGKILK-EAEESDQAPASEEELGNNL 115
           GDQCREEND+  DDDFDDTYKIVNNI ++LSA+G+IL+ E EES+  P+SEEE+GN L
Sbjct: 61  GDQCREENDLFEDDDFDDTYKIVNNIAVTLSASGRILQQETEESEDIPSSEEEMGNIL 114

BLAST of MC02g0591 vs. NCBI nr
Match: KAG6604744.1 (hypothetical protein SDJN03_02061, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 102 bits (253), Expect = 1.73e-25
Identity = 58/97 (59.79%), Postives = 71/97 (73.20%), Query Frame = 0

Query: 1  MAVFRRAALLCLGTILLCFLFAGAAASDSDYGDDIHTVRHSSNSGAALDDCKSDQQDKGD 60
          MAV RR AL  LGTILLCFL   AA +DSD+G ++H VR+SS          +D+ +K  
Sbjct: 1  MAVSRRLALFSLGTILLCFLITRAAVADSDHGHNVHVVRYSS--------AATDESEKAH 60

Query: 61 QCREENDIVGDDDFDDTYKIVNNIPLSLSAAGKILKE 97
          QCR+END V DDDFDDTYKIVNNI ++LSA+G+ILKE
Sbjct: 61 QCRQENDDV-DDDFDDTYKIVNNIAITLSASGRILKE 88

BLAST of MC02g0591 vs. NCBI nr
Match: RXH90050.1 (hypothetical protein DVH24_032407 [Malus domestica])

HSP 1 Score: 73.9 bits (180), Expect = 2.80e-14
Identity = 49/122 (40.16%), Postives = 67/122 (54.92%), Query Frame = 0

Query: 1   MAVFRRAALLCLGTILLCFLFAGAAASDSDYGDDIHTVRHSSNSGAALDDCKSDQQDKGD 60
           MAV RR  LLCLGT+L        A +  ++GD                 C SD    GD
Sbjct: 1   MAVSRRLLLLCLGTLLASVFLLKVAEARENHGD-----------------CHSDPN-NGD 60

Query: 61  QCRE-ENDIVGDDDFDDTYKIVNNIPLSLSA-AGKILKEAEESDQAPASEEELGNNLSIL 120
           QCRE E D VGDDD DDTYKIVN + ++LSA  G++  +A+E   A  +E+   +++ ++
Sbjct: 61  QCREDETDAVGDDDVDDTYKIVNKVAVTLSARTGEVEPDADELPDADETEDNESSHVIVM 104

BLAST of MC02g0591 vs. ExPASy TrEMBL
Match: A0A5D3CVV2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00150 PE=4 SV=1)

HSP 1 Score: 135 bits (339), Expect = 1.52e-38
Identity = 77/122 (63.11%), Postives = 94/122 (77.05%), Query Frame = 0

Query: 1   MAVFRRAAL-LCLGTILLCFLFAGAAASDSDYGDDIHTVRHSSNSGAALDDCKSDQQDKG 60
           MA+ RR AL L LGTIL  FLF   +A+ SDYG+DIHTVRH S++     DCK +  DKG
Sbjct: 1   MAISRRLALILSLGTILFSFLFTRVSAAGSDYGNDIHTVRHPSDTA----DCKREHLDKG 60

Query: 61  DQCREENDIVGDDDFDDTYKIVNNIPLSLSAAGKILK-EAEESDQAPASEEELGNNLSIL 120
           DQCRE+ND+  DDDFDDTYKIVNNI ++LSA+G IL+ +AEESD  P+SEEE+GN L I+
Sbjct: 61  DQCREDNDLFEDDDFDDTYKIVNNIAITLSASGSILQPDAEESDDIPSSEEEIGNML-IV 117

BLAST of MC02g0591 vs. ExPASy TrEMBL
Match: A0A0A0KGZ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G169270 PE=4 SV=1)

HSP 1 Score: 133 bits (334), Expect = 9.00e-38
Identity = 77/123 (62.60%), Postives = 95/123 (77.24%), Query Frame = 0

Query: 1   MAVFRRAAL-LCLGTILLCFLFAG-AAASDSDYGDDIHTVRHSSNSGAALDDCKSDQQDK 60
           MA+ RR  L L LGTIL CFLF G +AA+  DYGDDIHTV+H S++     +CK +  DK
Sbjct: 1   MAISRRLPLILTLGTILFCFLFIGVSAAAGPDYGDDIHTVKHPSDTA----ECKREHLDK 60

Query: 61  GDQCREENDIVGDDDFDDTYKIVNNIPLSLSAAGKILK-EAEESDQAPASEEELGNNLSI 120
           GDQCREEND+  DDDFDDTYKIVNNI ++LSA+G+IL+ E EES+  P+SEEE+GN L I
Sbjct: 61  GDQCREENDLFEDDDFDDTYKIVNNIAVTLSASGRILQQETEESEDIPSSEEEMGNIL-I 118

BLAST of MC02g0591 vs. ExPASy TrEMBL
Match: A0A498J3I4 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_032407 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.35e-14
Identity = 49/122 (40.16%), Postives = 67/122 (54.92%), Query Frame = 0

Query: 1   MAVFRRAALLCLGTILLCFLFAGAAASDSDYGDDIHTVRHSSNSGAALDDCKSDQQDKGD 60
           MAV RR  LLCLGT+L        A +  ++GD                 C SD    GD
Sbjct: 1   MAVSRRLLLLCLGTLLASVFLLKVAEARENHGD-----------------CHSDPN-NGD 60

Query: 61  QCRE-ENDIVGDDDFDDTYKIVNNIPLSLSA-AGKILKEAEESDQAPASEEELGNNLSIL 120
           QCRE E D VGDDD DDTYKIVN + ++LSA  G++  +A+E   A  +E+   +++ ++
Sbjct: 61  QCREDETDAVGDDDVDDTYKIVNKVAVTLSARTGEVEPDADELPDADETEDNESSHVIVM 104

BLAST of MC02g0591 vs. ExPASy TrEMBL
Match: A0A540MMV8 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_014257 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.71e-14
Identity = 49/122 (40.16%), Postives = 67/122 (54.92%), Query Frame = 0

Query: 1   MAVFRRAALLCLGTILLCFLFAGAAASDSDYGDDIHTVRHSSNSGAALDDCKSDQQDKGD 60
           MAV RR  LLCLGT+L        A +  ++GD                 C SD    GD
Sbjct: 1   MAVSRRLLLLCLGTLLASVFLLKVAEAHENHGD-----------------CHSDPN-NGD 60

Query: 61  QCRE-ENDIVGDDDFDDTYKIVNNIPLSLSA-AGKILKEAEESDQAPASEEELGNNLSIL 120
           QCRE E D VGDDD DDTYKIVN + ++LSA  G++   A+E  +A  +E+   +++ ++
Sbjct: 61  QCREDETDAVGDDDVDDTYKIVNKVAVTLSARTGEVEPGADELPEADDTEDNESSHVIVM 104

BLAST of MC02g0591 vs. ExPASy TrEMBL
Match: A0A2P5B771 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_330420 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 8.53e-14
Identity = 49/118 (41.53%), Postives = 66/118 (55.93%), Query Frame = 0

Query: 11  CLGTILLCFLF-AGAAASDSDYGDDIHTVRHSSNSGAALDDCKSD-QQDKGDQCREENDI 70
           CLGT+L+  LF   AA +D  +  +IH VRH          CK     +KGDQC++ +D 
Sbjct: 12  CLGTLLVILLFFISAAEADDHHSSEIHAVRHGGGG------CKGGLNSEKGDQCQDNDDD 71

Query: 71  VGDD---DFDDTYKIVNNIPLSLSAAGKILKEAEESDQAPASEEE---LGNNLSILGH 120
             DD   D DDTYKIVNN+ +SLS+ GK L  AE  D   +SE +   +   + +LGH
Sbjct: 72  DDDDLDDDVDDTYKIVNNVKVSLSSTGK-LSTAESLDDDDSSESDVDRINEGVVVLGH 122

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6570557.14.62e-4266.67hypothetical protein SDJN03_29472, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0054503.13.13e-3863.11hypothetical protein E6C27_scaffold24G002830 [Cucumis melo var. makuwa] >TYK1453... [more]
KAE8646929.15.33e-3262.71hypothetical protein Csa_021071 [Cucumis sativus][more]
KAG6604744.11.73e-2559.79hypothetical protein SDJN03_02061, partial [Cucurbita argyrosperma subsp. sorori... [more]
RXH90050.12.80e-1440.16hypothetical protein DVH24_032407 [Malus domestica][more]
Match NameE-valueIdentityDescription
A0A5D3CVV21.52e-3863.11Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KGZ49.00e-3862.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G169270 PE=4 SV=1[more]
A0A498J3I41.35e-1440.16Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_032407 PE=4 SV=1[more]
A0A540MMV82.71e-1440.16Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_014257 PE=4 SV=1[more]
A0A2P5B7718.53e-1441.53Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_330420 PE=4 SV... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..120

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC02g0591.1MC02g0591.1mRNA