MC02g0537 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC02g0537
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionDUF4228 domain-containing protein
LocationMC02: 4375021 .. 4375443 (+)
RNA-Seq ExpressionMC02g0537
SyntenyMC02g0537
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AACTGCTTGAGGAGCAACAGAGTGATGGCGCAGGATGAGGCTTGTTCGCCTTCGCCTAATTCGTCTTTGACAGAAACTAATTACAAAGTGGAAGATAAACCAGCCGCCGGATCGGCGCTGGCGCGGCCGAAGACGGAGGAGGCGAGAATCGCCGCGCGACGTAAGAAGGTTGTGAGGTTTCAGCTACGAGAAGATGAAATTTCCGGCGGCGGAGGCGGAGTATTGAGGATTAAAGTGGTGGTGTCGCAGAAAGAGTTGAAGCAGATATTGAAGGATAGAGAAAGCAATTCCTCCACATTGGAGGAATTGTTAGCTGAATTGAAGATGAAAGGCAGGACAATTTCAGATGCTAGAGCCGATAATGAGGAGGATGAAAATGGAAGCTGGAGACCGGCCTTGGAAAGCATTCCTGAAGATCTCCAT

mRNA sequence

AACTGCTTGAGGAGCAACAGAGTGATGGCGCAGGATGAGGCTTGTTCGCCTTCGCCTAATTCGTCTTTGACAGAAACTAATTACAAAGTGGAAGATAAACCAGCCGCCGGATCGGCGCTGGCGCGGCCGAAGACGGAGGAGGCGAGAATCGCCGCGCGACGTAAGAAGGTTGTGAGGTTTCAGCTACGAGAAGATGAAATTTCCGGCGGCGGAGGCGGAGTATTGAGGATTAAAGTGGTGGTGTCGCAGAAAGAGTTGAAGCAGATATTGAAGGATAGAGAAAGCAATTCCTCCACATTGGAGGAATTGTTAGCTGAATTGAAGATGAAAGGCAGGACAATTTCAGATGCTAGAGCCGATAATGAGGAGGATGAAAATGGAAGCTGGAGACCGGCCTTGGAAAGCATTCCTGAAGATCTCCAT

Coding sequence (CDS)

AACTGCTTGAGGAGCAACAGAGTGATGGCGCAGGATGAGGCTTGTTCGCCTTCGCCTAATTCGTCTTTGACAGAAACTAATTACAAAGTGGAAGATAAACCAGCCGCCGGATCGGCGCTGGCGCGGCCGAAGACGGAGGAGGCGAGAATCGCCGCGCGACGTAAGAAGGTTGTGAGGTTTCAGCTACGAGAAGATGAAATTTCCGGCGGCGGAGGCGGAGTATTGAGGATTAAAGTGGTGGTGTCGCAGAAAGAGTTGAAGCAGATATTGAAGGATAGAGAAAGCAATTCCTCCACATTGGAGGAATTGTTAGCTGAATTGAAGATGAAAGGCAGGACAATTTCAGATGCTAGAGCCGATAATGAGGAGGATGAAAATGGAAGCTGGAGACCGGCCTTGGAAAGCATTCCTGAAGATCTCCAT

Protein sequence

NCLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARRKKVVRFQLREDEISGGGGGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGRTISDARADNEEDENGSWRPALESIPEDLH
Homology
BLAST of MC02g0537 vs. NCBI nr
Match: XP_022140639.1 (uncharacterized protein LOC111011249 [Momordica charantia])

HSP 1 Score: 264 bits (675), Expect = 4.47e-88
Identity = 139/141 (98.58%), Postives = 140/141 (99.29%), Query Frame = 0

Query: 1   NCLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARRKKVVRF 60
           NCLR+NRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARRKKVVRF
Sbjct: 45  NCLRNNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARRKKVVRF 104

Query: 61  QLREDEISGGGGGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGRTISDARAD 120
           Q REDEISGGGGGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGRTISDARAD
Sbjct: 105 QQREDEISGGGGGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGRTISDARAD 164

Query: 121 NEEDENGSWRPALESIPEDLH 141
           NEEDENGSWRPALESIPEDLH
Sbjct: 165 NEEDENGSWRPALESIPEDLH 185

BLAST of MC02g0537 vs. NCBI nr
Match: KAG6570883.1 (hypothetical protein SDJN03_29798, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 150 bits (379), Expect = 1.70e-43
Identity = 94/149 (63.09%), Postives = 111/149 (74.50%), Query Frame = 0

Query: 2   CLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARI-AARRKKVVRF 61
           C +SN+VMAQDE+C    NS   E   KVE+KP AGSA+A+PKT E R  AA  KKVVRF
Sbjct: 5   CFKSNKVMAQDESCLALSNSPPVEAK-KVEEKPVAGSAMAKPKTAEERSGAAAGKKVVRF 64

Query: 62  QLRE-DEISGGGGG------VLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGRT 121
           +L+E DE SGG GG      VLRIKVV+SQ+ELKQILK+ E++S +LEEL+AE K+KGRT
Sbjct: 65  KLQEEDENSGGSGGDGDRAGVLRIKVVMSQRELKQILKENENSSRSLEELIAEFKVKGRT 124

Query: 122 -ISDARADNEEDENGSWRPALESIPEDLH 141
            +SDA  D  EDENGS RPALE IPE LH
Sbjct: 125 TVSDAITDEVEDENGSRRPALECIPEGLH 152

BLAST of MC02g0537 vs. NCBI nr
Match: XP_038902397.1 (uncharacterized protein LOC120089037 [Benincasa hispida])

HSP 1 Score: 150 bits (378), Expect = 2.20e-43
Identity = 89/141 (63.12%), Postives = 103/141 (73.05%), Query Frame = 0

Query: 1   NCLRSNRVMAQDEACSPSPNSSLTETNYK-VEDKPAAGSALARPKTEEARIAARRKKVVR 60
           NC +SN+VMAQDE     P   L     K VE+KP  GSA+A+PKT EAR     KKVVR
Sbjct: 4   NCFKSNKVMAQDE-----PEDLLPPIEAKKVEEKPRPGSAMAKPKTAEARTGGASKKVVR 63

Query: 61  FQLREDEISGGG-GGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGRT-ISDA 120
           F+L+E+E    G GGVLRIKVV+SQKELKQ+LKDRE+NS TLEEL+ ELK+KGRT ISD 
Sbjct: 64  FKLQEEEEKNSGDGGVLRIKVVMSQKELKQMLKDRENNSCTLEELITELKVKGRTTISDG 123

Query: 121 RADNEEDENGSWRPALESIPE 138
           R D  EDENG W+P LE IPE
Sbjct: 124 RIDAVEDENGRWKPDLEGIPE 139

BLAST of MC02g0537 vs. NCBI nr
Match: KGN63254.1 (hypothetical protein Csa_022493 [Cucumis sativus])

HSP 1 Score: 119 bits (297), Expect = 3.97e-31
Identity = 77/144 (53.47%), Postives = 95/144 (65.97%), Query Frame = 0

Query: 2   CLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARRKKVVRFQ 61
           C +SN+VMAQD++    P   L E   KV+ +P  GSA+A+PK      A   KKVVRF 
Sbjct: 5   CFKSNKVMAQDDSYDDFPPHHLIEPK-KVQQQPLPGSAMAKPKNGTGGAAG--KKVVRFN 64

Query: 62  LREDEI------SGGGG-GVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGRTI 121
           L+E+E       SG  G GVLRIKVV+SQKELKQILK RE+NS +LEEL+ ELK+KGR  
Sbjct: 65  LQEEEKDEEGRNSGDSGPGVLRIKVVISQKELKQILKSRENNSCSLEELIEELKVKGRAT 124

Query: 122 SDARADNEEDENGSWRPALESIPE 138
           + +      DE GSW+PALE IPE
Sbjct: 125 TVSA-----DETGSWKPALECIPE 140

BLAST of MC02g0537 vs. NCBI nr
Match: TYK24218.1 (hypothetical protein E5676_scaffold27G00200 [Cucumis melo var. makuwa])

HSP 1 Score: 115 bits (288), Expect = 9.39e-30
Identity = 80/152 (52.63%), Postives = 98/152 (64.47%), Query Frame = 0

Query: 2   CLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAA-GSALARPKTEEARIAARRKKVVRF 61
           C R+N+VMAQD++    P     E   KVE++P   GSA+A+PK      A   KKVVRF
Sbjct: 5   CFRTNKVMAQDDSYDNLPPDQFIEAE-KVEEQPLRPGSAMAKPKNGTGGAAG--KKVVRF 64

Query: 62  QLREDEI------SG--GGGGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGR 121
            L+E+E       SG   G GVLRIKVV+SQKELK+ILK+RE+NS +LEEL+ ELK+KGR
Sbjct: 65  NLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELKVKGR 124

Query: 122 TISDARADNEEDENGSWRPALESIPE---DLH 141
                 A    DE GSW+PALE IPE   DLH
Sbjct: 125 ------ATTVSDEIGSWKPALECIPEGEGDLH 147

BLAST of MC02g0537 vs. ExPASy TrEMBL
Match: A0A6J1CG85 (uncharacterized protein LOC111011249 OS=Momordica charantia OX=3673 GN=LOC111011249 PE=4 SV=1)

HSP 1 Score: 264 bits (675), Expect = 2.16e-88
Identity = 139/141 (98.58%), Postives = 140/141 (99.29%), Query Frame = 0

Query: 1   NCLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARRKKVVRF 60
           NCLR+NRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARRKKVVRF
Sbjct: 45  NCLRNNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARRKKVVRF 104

Query: 61  QLREDEISGGGGGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGRTISDARAD 120
           Q REDEISGGGGGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGRTISDARAD
Sbjct: 105 QQREDEISGGGGGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGRTISDARAD 164

Query: 121 NEEDENGSWRPALESIPEDLH 141
           NEEDENGSWRPALESIPEDLH
Sbjct: 165 NEEDENGSWRPALESIPEDLH 185

BLAST of MC02g0537 vs. ExPASy TrEMBL
Match: A0A0A0LQE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418890 PE=4 SV=1)

HSP 1 Score: 119 bits (297), Expect = 1.92e-31
Identity = 77/144 (53.47%), Postives = 95/144 (65.97%), Query Frame = 0

Query: 2   CLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARRKKVVRFQ 61
           C +SN+VMAQD++    P   L E   KV+ +P  GSA+A+PK      A   KKVVRF 
Sbjct: 5   CFKSNKVMAQDDSYDDFPPHHLIEPK-KVQQQPLPGSAMAKPKNGTGGAAG--KKVVRFN 64

Query: 62  LREDEI------SGGGG-GVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGRTI 121
           L+E+E       SG  G GVLRIKVV+SQKELKQILK RE+NS +LEEL+ ELK+KGR  
Sbjct: 65  LQEEEKDEEGRNSGDSGPGVLRIKVVISQKELKQILKSRENNSCSLEELIEELKVKGRAT 124

Query: 122 SDARADNEEDENGSWRPALESIPE 138
           + +      DE GSW+PALE IPE
Sbjct: 125 TVSA-----DETGSWKPALECIPE 140

BLAST of MC02g0537 vs. ExPASy TrEMBL
Match: A0A5D3DKZ8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00200 PE=4 SV=1)

HSP 1 Score: 115 bits (288), Expect = 4.55e-30
Identity = 80/152 (52.63%), Postives = 98/152 (64.47%), Query Frame = 0

Query: 2   CLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAA-GSALARPKTEEARIAARRKKVVRF 61
           C R+N+VMAQD++    P     E   KVE++P   GSA+A+PK      A   KKVVRF
Sbjct: 5   CFRTNKVMAQDDSYDNLPPDQFIEAE-KVEEQPLRPGSAMAKPKNGTGGAAG--KKVVRF 64

Query: 62  QLREDEI------SG--GGGGVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGR 121
            L+E+E       SG   G GVLRIKVV+SQKELK+ILK+RE+NS +LEEL+ ELK+KGR
Sbjct: 65  NLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELKVKGR 124

Query: 122 TISDARADNEEDENGSWRPALESIPE---DLH 141
                 A    DE GSW+PALE IPE   DLH
Sbjct: 125 ------ATTVSDEIGSWKPALECIPEGEGDLH 147

BLAST of MC02g0537 vs. ExPASy TrEMBL
Match: A0A6J1B1M6 (uncharacterized protein LOC110423293 OS=Herrania umbratica OX=108875 GN=LOC110423293 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 9.95e-18
Identity = 64/153 (41.83%), Postives = 90/153 (58.82%), Query Frame = 0

Query: 1   NCLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAA------RR 60
           NCL SN+++AQ++   P P     E    +E+    G   A  K E A +AA      ++
Sbjct: 3   NCLTSNKIVAQNDQ--PEPQGCRAEV---IEE---TGKVTA-SKLERAEVAADEGEKVKK 62

Query: 61  KKVVRFQLREDEISGGG------GGVLRIKVVVSQKELKQILKDRESNSST-LEELLAEL 120
           KK+VRF+L E+    GG       GV+RI++VV+QKELKQIL  RE    T LE L+  +
Sbjct: 63  KKMVRFKLNEENDVDGGRQGESKDGVVRIRLVVTQKELKQILSSREDLKHTSLEGLIRVM 122

Query: 121 KMKGRTISDARADNEEDE-NGSWRPALESIPED 139
           K++G  IS+    N++D  +G WRPALESIPE+
Sbjct: 123 KLRGVRISEGGRTNDDDGFHGGWRPALESIPEE 146

BLAST of MC02g0537 vs. ExPASy TrEMBL
Match: A0A4V3WQ11 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_029836 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.50e-17
Identity = 58/153 (37.91%), Postives = 86/153 (56.21%), Query Frame = 0

Query: 1   NCLRSNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARIAARRKKVVRF 60
           NC+ SN+++ QDE                 +++P    A+ R       +   +KK VRF
Sbjct: 3   NCVTSNKILGQDEK----------------DEQPREERAIERSVRH---VDGGKKKSVRF 62

Query: 61  QLREDEIS------GGG--------GGVLRIKVVVSQKELKQILKDRESNSSTLEELLAE 120
           +L E+E        G G        GG +RI+VVV+Q+EL +IL + +S  S++E++L E
Sbjct: 63  KLHEEEEEEEEEEDGNGEERQGCSKGGAVRIRVVVTQRELIRIL-NTKSKYSSVEQMLGE 122

Query: 121 LKMKGRTISDARADNEEDENGSWRPALESIPED 139
           +K+K R IS  R+ ++E  NGSWRPALESIPED
Sbjct: 123 MKLKSRKISQIRSSDDEGTNGSWRPALESIPED 135

BLAST of MC02g0537 vs. TAIR 10
Match: AT3G21680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 4.1e-08
Identity = 33/67 (49.25%), Postives = 48/67 (71.64%), Query Frame = 0

Query: 74  VLRIKVVVSQKELKQILKDRESNSSTLEELLAELKMKGRTISDARADNEEDENG--SWRP 133
           V+RIKVVV++KEL+QIL   ++  +++++L+  LK  GR IS A  + +E E G  +WRP
Sbjct: 51  VVRIKVVVTKKELRQIL-GHKNGINSIQQLVHVLKDSGRNISMASYEEDEKEEGDENWRP 110

Query: 134 ALESIPE 139
            LESIPE
Sbjct: 111 TLESIPE 116

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022140639.14.47e-8898.58uncharacterized protein LOC111011249 [Momordica charantia][more]
KAG6570883.11.70e-4363.09hypothetical protein SDJN03_29798, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_038902397.12.20e-4363.12uncharacterized protein LOC120089037 [Benincasa hispida][more]
KGN63254.13.97e-3153.47hypothetical protein Csa_022493 [Cucumis sativus][more]
TYK24218.19.39e-3052.63hypothetical protein E5676_scaffold27G00200 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A6J1CG852.16e-8898.58uncharacterized protein LOC111011249 OS=Momordica charantia OX=3673 GN=LOC111011... [more]
A0A0A0LQE91.92e-3153.47Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418890 PE=4 SV=1[more]
A0A5D3DKZ84.55e-3052.63Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1B1M69.95e-1841.83uncharacterized protein LOC110423293 OS=Herrania umbratica OX=108875 GN=LOC11042... [more]
A0A4V3WQ111.50e-1737.91Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_0298... [more]
Match NameE-valueIdentityDescription
AT3G21680.14.1e-0849.25unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 90..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..129
NoneNo IPR availablePANTHERPTHR33148PLASTID MOVEMENT IMPAIRED PROTEIN-RELATEDcoord: 1..139
NoneNo IPR availablePANTHERPTHR33148:SF55OS01G0219300 PROTEINcoord: 1..139

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC02g0537.1MC02g0537.1mRNA