MC02g0511 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g0511
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC02: 4214667 .. 4214969 (-)
RNA-Seq Expression	MC02g0511
Synteny	MC02g0511

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTGTGGTTCGACTTGGTTTGCTGTGTCTGATTCTCGCCGGGATGACGTCGATCCAACCCACGGCAGCGGATACCGCCGAGGCGCCAGCTGTTGCCGCCGCGACGCCATATTTTGCAGCTGGAATCGGAAAGGAGGAGGAGCAGGCAGTAGTGGCTGAAGCTCCTGAAATCCGACGGCTGGGAAGGCATCATTTTCACACCTCCATGGCCGGTGGAGGGGTGCTGATCGGCGGCCTCGCCACTGCTGTATTTGCTGTGGTCTTTTGCTACATTCGGGTGACTAGAAAACCAAACGCTGTCAAT

mRNA sequence

GCTGTGGTTCGACTTGGTTTGCTGTGTCTGATTCTCGCCGGGATGACGTCGATCCAACCCACGGCAGCGGATACCGCCGAGGCGCCAGCTGTTGCCGCCGCGACGCCATATTTTGCAGCTGGAATCGGAAAGGAGGAGGAGCAGGCAGTAGTGGCTGAAGCTCCTGAAATCCGACGGCTGGGAAGGCATCATTTTCACACCTCCATGGCCGGTGGAGGGGTGCTGATCGGCGGCCTCGCCACTGCTGTATTTGCTGTGGTCTTTTGCTACATTCGGGTGACTAGAAAACCAAACGCTGTCAAT

Coding sequence (CDS)

GCTGTGGTTCGACTTGGTTTGCTGTGTCTGATTCTCGCCGGGATGACGTCGATCCAACCCACGGCAGCGGATACCGCCGAGGCGCCAGCTGTTGCCGCCGCGACGCCATATTTTGCAGCTGGAATCGGAAAGGAGGAGGAGCAGGCAGTAGTGGCTGAAGCTCCTGAAATCCGACGGCTGGGAAGGCATCATTTTCACACCTCCATGGCCGGTGGAGGGGTGCTGATCGGCGGCCTCGCCACTGCTGTATTTGCTGTGGTCTTTTGCTACATTCGGGTGACTAGAAAACCAAACGCTGTCAAT

Protein sequence

AVVRLGLLCLILAGMTSIQPTAADTAEAPAVAAATPYFAAGIGKEEEQAVVAEAPEIRRLGRHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKPNAVN

Homology

[Close]

BLAST of MC02g0511 vs. NCBI nr
Match: XP_023532519.1 (uncharacterized protein LOC111794654 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 134 bits (338), Expect = 2.17e-38
Identity = 75/104 (72.12%), Postives = 80/104 (76.92%), Query Frame = 0


Query: 1   AVVRLGLLCLILAGMTSIQPTAADTAEAPAVAAATPYFAAGIGKE---EEQAVVAEAPEI 60
           AVVR GLLCL+L GM   Q TAA TAEAP VA A P+F A IG E   E Q  VA  PEI
Sbjct: 15  AVVRHGLLCLVLVGMWLSQLTAASTAEAPTVATAMPFFGAEIGMEMEMENQQGVAAGPEI 74

Query: 61  RRLGRHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKPNAVN 101
           RRLG+HH HTSMAGGGVL+GGLATAVFAVVFCYIRVTRKP+ V 
Sbjct: 75  RRLGKHHLHTSMAGGGVLLGGLATAVFAVVFCYIRVTRKPDPVK 118

[Close]

BLAST of MC02g0511 vs. NCBI nr
Match: XP_022947872.1 (uncharacterized protein LOC111451632 [Cucurbita moschata] >KAG6604835.1 hypothetical protein SDJN03_02152, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 128 bits (321), Expect = 5.52e-36
Identity = 74/104 (71.15%), Postives = 79/104 (75.96%), Query Frame = 0


Query: 1   AVVRLGLLCLILAGMTSIQPTAADTAEAPAVAAATPYFAAGIGKE---EEQAVVAEAPEI 60
           AVVR GLLCL+L GM   Q TAA TAEAP VA A P+F   IGKE   E Q  VA  PEI
Sbjct: 2   AVVRHGLLCLVLVGMWLSQLTAASTAEAPTVATAMPFFGE-IGKEVEMENQPGVAAGPEI 61

Query: 61  RRLGRHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKPNAVN 101
           RRLG+HH HTSMAGGGVL+GGLATAVFAVVFCYIRVTRK + V 
Sbjct: 62  RRLGKHHLHTSMAGGGVLLGGLATAVFAVVFCYIRVTRKSDPVK 104

[Close]

BLAST of MC02g0511 vs. NCBI nr
Match: KAG7034949.1 (hypothetical protein SDJN02_01742 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 128 bits (321), Expect = 2.11e-35
Identity = 74/104 (71.15%), Postives = 79/104 (75.96%), Query Frame = 0


Query: 1   AVVRLGLLCLILAGMTSIQPTAADTAEAPAVAAATPYFAAGIGKE---EEQAVVAEAPEI 60
           AVVR GLLCL+L GM   Q TAA TAEAP VA A P+F   IGKE   E Q  VA  PEI
Sbjct: 47  AVVRHGLLCLVLVGMWLSQLTAASTAEAPTVATAMPFFGE-IGKEVEMENQPGVAAGPEI 106

Query: 61  RRLGRHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKPNAVN 101
           RRLG+HH HTSMAGGGVL+GGLATAVFAVVFCYIRVTRK + V 
Sbjct: 107 RRLGKHHLHTSMAGGGVLLGGLATAVFAVVFCYIRVTRKSDPVK 149

[Close]

BLAST of MC02g0511 vs. NCBI nr
Match: KGN46704.1 (hypothetical protein Csa_020980 [Cucumis sativus])

HSP 1 Score: 123 bits (309), Expect = 3.71e-34
Identity = 72/103 (69.90%), Postives = 80/103 (77.67%), Query Frame = 0


Query: 1   AVVRLGLLCLILAGMTSIQPTAADTAEAPAVAAATPYFAAGIGKEE--EQAVVAEAPEIR 60
           AVVRL L+ LILAGM  IQ TAA+  EAP V  A  +F + IGKEE  +  VVAE P IR
Sbjct: 3   AVVRLALMSLILAGMFFIQLTAANVKEAPMVDTAL-FFGSKIGKEEAVQGPVVAEGPAIR 62

Query: 61  RLGRHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKPNAVN 101
           RLG+HHFHTS+AGG VLIG LATAVFA+VFCYIRVTRKPN VN
Sbjct: 63  RLGKHHFHTSVAGGRVLIGSLATAVFAIVFCYIRVTRKPNHVN 104

[Close]

BLAST of MC02g0511 vs. NCBI nr
Match: KAG6572323.1 (hypothetical protein SDJN03_29051, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 86.3 bits (212), Expect = 1.90e-19
Identity = 54/100 (54.00%), Postives = 65/100 (65.00%), Query Frame = 0


Query: 4   RLGLLCLILAGMTSIQPTA--ADTAEAPAVAAATPYFAAGIGKEEEQAVVAEAPEIRRLG 63
           ++ LLCLILA +  IQ  A  A T  +   AA  P     +    E   +AEAPEIRRLG
Sbjct: 3   KISLLCLILAQILLIQAMASTATTTTSHVSAAPEPSETDNV----EGPGLAEAPEIRRLG 62

Query: 64  RHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKPNAVN 101
           +HH   S+AGGGV+IGGL TAVFA VFCYIRVTRK + V+
Sbjct: 63  KHHVDKSVAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVD 98

[Close]

BLAST of MC02g0511 vs. ExPASy TrEMBL
Match: A0A6J1G7L7 (uncharacterized protein LOC111451632 OS=Cucurbita moschata OX=3662 GN=LOC111451632 PE=4 SV=1)

HSP 1 Score: 128 bits (321), Expect = 2.67e-36
Identity = 74/104 (71.15%), Postives = 79/104 (75.96%), Query Frame = 0


Query: 1   AVVRLGLLCLILAGMTSIQPTAADTAEAPAVAAATPYFAAGIGKE---EEQAVVAEAPEI 60
           AVVR GLLCL+L GM   Q TAA TAEAP VA A P+F   IGKE   E Q  VA  PEI
Sbjct: 2   AVVRHGLLCLVLVGMWLSQLTAASTAEAPTVATAMPFFGE-IGKEVEMENQPGVAAGPEI 61

Query: 61  RRLGRHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKPNAVN 101
           RRLG+HH HTSMAGGGVL+GGLATAVFAVVFCYIRVTRK + V 
Sbjct: 62  RRLGKHHLHTSMAGGGVLLGGLATAVFAVVFCYIRVTRKSDPVK 104

[Close]

BLAST of MC02g0511 vs. ExPASy TrEMBL
Match: A0A0A0KCY0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G124190 PE=4 SV=1)

HSP 1 Score: 123 bits (309), Expect = 1.80e-34
Identity = 72/103 (69.90%), Postives = 80/103 (77.67%), Query Frame = 0


Query: 1   AVVRLGLLCLILAGMTSIQPTAADTAEAPAVAAATPYFAAGIGKEE--EQAVVAEAPEIR 60
           AVVRL L+ LILAGM  IQ TAA+  EAP V  A  +F + IGKEE  +  VVAE P IR
Sbjct: 3   AVVRLALMSLILAGMFFIQLTAANVKEAPMVDTAL-FFGSKIGKEEAVQGPVVAEGPAIR 62

Query: 61  RLGRHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKPNAVN 101
           RLG+HHFHTS+AGG VLIG LATAVFA+VFCYIRVTRKPN VN
Sbjct: 63  RLGKHHFHTSVAGGRVLIGSLATAVFAIVFCYIRVTRKPNHVN 104

[Close]

BLAST of MC02g0511 vs. ExPASy TrEMBL
Match: A0A5D3C590 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003890 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 7.70e-19
Identity = 52/97 (53.61%), Postives = 63/97 (64.95%), Query Frame = 0


Query: 7   LLCLILAGMTSIQP--TAADTAEAPAVAAATPYFAAGIGKEEEQAVVAEAPEIRRLGRHH 66
           L CLI+A +  IQ   + A T + P  AA  P          E + VAEAPEIRRLG+HH
Sbjct: 7   LFCLIVAEILLIQAMTSIATTTDLPLSAAPEPAEKG----TREGSDVAEAPEIRRLGKHH 66

Query: 67  FHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKPNAVN 101
              S+AGGGV+IGGL TA+FA VFCYIRVTRK + V+
Sbjct: 67  GDKSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVD 99

[Close]

BLAST of MC02g0511 vs. ExPASy TrEMBL
Match: A0A0A0K3N0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G045480 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.12e-18
Identity = 41/55 (74.55%), Postives = 46/55 (83.64%), Query Frame = 0


Query: 47  EQAVVAEAPEIRRLGRHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKPNAVN 101
           E + VAEAPEIRRLG+HH   SMAGGGV+IGGL TAVFA VFCYIRVTRK + V+
Sbjct: 46  EGSEVAEAPEIRRLGKHHGDKSMAGGGVIIGGLVTAVFAAVFCYIRVTRKRDGVD 100

[Close]

BLAST of MC02g0511 vs. ExPASy TrEMBL
Match: A0A200QMD0 (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_8997g5 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.23e-18
Identity = 41/59 (69.49%), Postives = 49/59 (83.05%), Query Frame = 0


Query: 44  KEEEQAVVAEAPEIRRLGRHHFHTS----MAGGGVLIGGLATAVFAVVFCYIRVTRKPN 98
           K E+Q  VAEAPEIRR+G+HH H+S    +AGGGV+IGGLATA+FA VFCYIRVTR+ N
Sbjct: 69  KTEDQDEVAEAPEIRRMGKHHHHSSTDESIAGGGVIIGGLATAIFAAVFCYIRVTRRRN 127

[Close]

BLAST of MC02g0511 vs. TAIR 10
Match: AT3G09280.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; Has 31 Blast hits to 31 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 56.2 bits (134), Expect = 1.7e-08
Identity = 41/98 (41.84%), Postives = 52/98 (53.06%), Query Frame = 0


Query: 7  LLCLILAGMTSIQPTAADTAEAPAVAAATPYFAAGIGKEEEQAVVAEAPEIRRL------ 66
          +LC +L  + S+   A+  AE PA           +G+ E     AEAPE+  L      
Sbjct: 7  VLCFLLTYVFSM-AAASSEAEPPATRK--------LGRHEWPGEEAEAPEVSHLEETVRR 66

Query: 67 GRHH--FHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK 97
          G HH     S+AGGGV++GGLAT    VVFCYIR TRK
Sbjct: 67 GHHHSTVERSVAGGGVILGGLATTFLVVVFCYIRATRK 95

The following BLAST results are available for this feature:

BLAST of MC02g0511 vs.


Match Name	E-value	Identity	Description

BLAST of MC02g0511 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532519.1	2.17e-38	72.12	uncharacterized protein LOC111794654 [Cucurbita pepo subsp. pepo]	[more]
XP_022947872.1	5.52e-36	71.15	uncharacterized protein LOC111451632 [Cucurbita moschata] >KAG6604835.1 hypothet...	[more]
KAG7034949.1	2.11e-35	71.15	hypothetical protein SDJN02_01742 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KGN46704.1	3.71e-34	69.90	hypothetical protein Csa_020980 [Cucumis sativus]	[more]
KAG6572323.1	1.90e-19	54.00	hypothetical protein SDJN03_29051, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MC02g0511 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G7L7	2.67e-36	71.15	uncharacterized protein LOC111451632 OS=Cucurbita moschata OX=3662 GN=LOC1114516...	[more]
A0A0A0KCY0	1.80e-34	69.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G124190 PE=4 SV=1	[more]
A0A5D3C590	7.70e-19	53.61	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0K3N0	1.12e-18	74.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G045480 PE=4 SV=1	[more]
A0A200QMD0	1.23e-18	69.49	Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_8997g5 PE=4 SV=1	[more]

BLAST of MC02g0511 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09280.1	1.7e-08	41.84	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34558	EXPRESSED PROTEIN	coord: 4..98
None	No IPR available	PANTHER	PTHR34558:SF4	EXPRESSED PROTEIN	coord: 4..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g0511.1	MC02g0511.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane