MC02g0484 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g0484
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Peroxisomal membrane protein 2
Location	MC02: 4015411 .. 4015581 (-)
RNA-Seq Expression	MC02g0484
Synteny	MC02g0484

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAATGGCGAAACTGGAGCAACTTGACCAGCAGGCCAAAGATAACAACGTCTCCGGAAAGAAGCAGAAGAGAAATCACGGCTCCACTTCGTTTTTCGTCTTCGTCGATTACCTTTTTCTCTTCATCTTTCTTGGCTTCCTCTGCTTCATCATTTTCAAGATGTTCGGTGTT

mRNA sequence

ATAATGGCGAAACTGGAGCAACTTGACCAGCAGGCCAAAGATAACAACGTCTCCGGAAAGAAGCAGAAGAGAAATCACGGCTCCACTTCGTTTTTCGTCTTCGTCGATTACCTTTTTCTCTTCATCTTTCTTGGCTTCCTCTGCTTCATCATTTTCAAGATGTTCGGTGTT

Coding sequence (CDS)

ATAATGGCGAAACTGGAGCAACTTGACCAGCAGGCCAAAGATAACAACGTCTCCGGAAAGAAGCAGAAGAGAAATCACGGCTCCACTTCGTTTTTCGTCTTCGTCGATTACCTTTTTCTCTTCATCTTTCTTGGCTTCCTCTGCTTCATCATTTTCAAGATGTTCGGTGTT

Protein sequence

IMAKLEQLDQQAKDNNVSGKKQKRNHGSTSFFVFVDYLFLFIFLGFLCFIIFKMFGV

Homology

[Close]

BLAST of MC02g0484 vs. NCBI nr
Match: KAG8641474.1 (hypothetical protein MANES_13G149401v8 [Manihot esculenta])

HSP 1 Score: 82.8 bits (203), Expect = 2.37e-19
Identity = 43/56 (76.79%), Postives = 50/56 (89.29%), Query Frame = 0


Query: 2  MAKLEQLDQQAKDNNVSGKKQKRNHGSTSFFVFVDYLFLFIFLGFLCFIIFKMFGV 57
          MAKLEQLD + K  N++ KK+KRNHGST+FFVFVDYLFLFIFLGFLCFI+FKM G+
Sbjct: 1  MAKLEQLDDEPKQLNINIKKKKRNHGSTTFFVFVDYLFLFIFLGFLCFILFKMVGI 56

[Close]

BLAST of MC02g0484 vs. NCBI nr
Match: KAG5020934.1 (hypothetical protein JHK87_016789 [Glycine soja] >KAG5033284.1 hypothetical protein JHK85_017266 [Glycine max] >KAG5047487.1 hypothetical protein JHK86_016893 [Glycine max] >KAG5149968.1 hypothetical protein JHK82_016849 [Glycine max] >KHN31947.1 hypothetical protein glysoja_025781 [Glycine soja])

HSP 1 Score: 70.5 bits (171), Expect = 1.62e-14
Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = 0


Query: 2  MAKLEQLDQQAKDNNVSGKKQKRNHGSTSFFVFVDYLFLFIFLGFLCFIIFKMFGV 57
          MAKLE++D     N+VS  K+KRNHGST FFVFVDYL+L IFLGFLCFIIFK+ G+
Sbjct: 1  MAKLEEID-----NSVSKTKKKRNHGSTGFFVFVDYLYLLIFLGFLCFIIFKIVGI 51

[Close]

BLAST of MC02g0484 vs. NCBI nr
Match: XP_007132650.1 (hypothetical protein PHAVU_011G113100g [Phaseolus vulgaris] >ESW04644.1 hypothetical protein PHAVU_011G113100g [Phaseolus vulgaris])

HSP 1 Score: 69.7 bits (169), Expect = 3.26e-14
Identity = 39/52 (75.00%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 2  MAKLEQLDQQAKDNNVSGKKQKRNHGSTSFFVFVDYLFLFIFLGFLCFIIFK 53
          MAKLE++D     N+V+  K+KRNHGST FFVFVDYLFLFIFLGFLCFIIFK
Sbjct: 1  MAKLEEMD-----NSVAKIKKKRNHGSTRFFVFVDYLFLFIFLGFLCFIIFK 47

[Close]

BLAST of MC02g0484 vs. NCBI nr
Match: KAG4385490.1 (hypothetical protein GLYMA_12G109302v4 [Glycine max])

HSP 1 Score: 67.4 bits (163), Expect = 2.69e-13
Identity = 38/56 (67.86%), Postives = 45/56 (80.36%), Query Frame = 0


Query: 2  MAKLEQLDQQAKDNNVSGKKQKRNHGSTSFFVFVDYLFLFIFLGFLCFIIFKMFGV 57
          MAKLE++D     N+VS  K+KRN GST FFVFVDYL+L IFLGFLCFIIFK+ G+
Sbjct: 1  MAKLEEID-----NSVSKTKKKRNQGSTGFFVFVDYLYLLIFLGFLCFIIFKIVGI 51

[Close]

BLAST of MC02g0484 vs. NCBI nr
Match: CAB4304873.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 66.6 bits (161), Expect = 7.39e-13
Identity = 34/52 (65.38%), Postives = 42/52 (80.77%), Query Frame = 0


Query: 2  MAKLEQLDQQAKDNNVSGKKQKRNHGSTSFFVFVDYLFLFIFLGFLCFIIFK 53
          MAK+E++ Q +  NN+  +K+KRNHGST FFVFVDY+FL IF  FLCFIIFK
Sbjct: 1  MAKVEEVHQDSNGNNIVKQKKKRNHGSTEFFVFVDYVFLSIFFAFLCFIIFK 52

[Close]

BLAST of MC02g0484 vs. ExPASy TrEMBL
Match: A0A0B2RJE1 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_016173 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 7.82e-15
Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = 0


Query: 2  MAKLEQLDQQAKDNNVSGKKQKRNHGSTSFFVFVDYLFLFIFLGFLCFIIFKMFGV 57
          MAKLE++D     N+VS  K+KRNHGST FFVFVDYL+L IFLGFLCFIIFK+ G+
Sbjct: 1  MAKLEEID-----NSVSKTKKKRNHGSTGFFVFVDYLYLLIFLGFLCFIIFKIVGI 51

[Close]

BLAST of MC02g0484 vs. ExPASy TrEMBL
Match: K7KY59 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_06G296400 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 7.82e-15
Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = 0


Query: 2  MAKLEQLDQQAKDNNVSGKKQKRNHGSTSFFVFVDYLFLFIFLGFLCFIIFKMFGV 57
          MAKLE++D     N+VS  K+KRNHGST FFVFVDYL+L IFLGFLCFIIFK+ G+
Sbjct: 1  MAKLEEID-----NSVSKTKKKRNHGSTGFFVFVDYLYLLIFLGFLCFIIFKIVGI 51

[Close]

BLAST of MC02g0484 vs. ExPASy TrEMBL
Match: V7AGI2 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G113100g PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.58e-14
Identity = 39/52 (75.00%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 2  MAKLEQLDQQAKDNNVSGKKQKRNHGSTSFFVFVDYLFLFIFLGFLCFIIFK 53
          MAKLE++D     N+V+  K+KRNHGST FFVFVDYLFLFIFLGFLCFIIFK
Sbjct: 1  MAKLEEMD-----NSVAKIKKKRNHGSTRFFVFVDYLFLFIFLGFLCFIIFK 47

[Close]

BLAST of MC02g0484 vs. ExPASy TrEMBL
Match: A0A2P2P083 (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 3.50e-14
Identity = 40/56 (71.43%), Postives = 43/56 (76.79%), Query Frame = 0


Query: 2  MAKLEQLDQQAKDNNVSGKKQKRNHGSTSFFVFVDYLFLFIFLGFLCFIIFKMFGV 57
          MAKLE LD + K      KK KRNHGST FFVFVDYLFL IFLGFLCFI+FK+ GV
Sbjct: 1  MAKLELLDNEPKQQKTEDKK-KRNHGSTKFFVFVDYLFLCIFLGFLCFILFKIVGV 55

[Close]

BLAST of MC02g0484 vs. ExPASy TrEMBL
Match: A0A6J5WX02 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS22652 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.58e-13
Identity = 34/52 (65.38%), Postives = 42/52 (80.77%), Query Frame = 0


Query: 2  MAKLEQLDQQAKDNNVSGKKQKRNHGSTSFFVFVDYLFLFIFLGFLCFIIFK 53
          MAK+E++ Q +  NN+  +K+KRNHGST FFVFVDY+FL IF  FLCFIIFK
Sbjct: 1  MAKVEEVHQDSNGNNIVKQKKKRNHGSTEFFVFVDYVFLSIFFAFLCFIIFK 52

The following BLAST results are available for this feature:

BLAST of MC02g0484 vs.


Match Name	E-value	Identity	Description

BLAST of MC02g0484 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG8641474.1	2.37e-19	76.79	hypothetical protein MANES_13G149401v8 [Manihot esculenta]	[more]
KAG5020934.1	1.62e-14	69.64	hypothetical protein JHK87_016789 [Glycine soja] >KAG5033284.1 hypothetical prot...	[more]
XP_007132650.1	3.26e-14	75.00	hypothetical protein PHAVU_011G113100g [Phaseolus vulgaris] >ESW04644.1 hypothet...	[more]
KAG4385490.1	2.69e-13	67.86	hypothetical protein GLYMA_12G109302v4 [Glycine max]	[more]
CAB4304873.1	7.39e-13	65.38	unnamed protein product [Prunus armeniaca]	[more]

BLAST of MC02g0484 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0B2RJE1	7.82e-15	69.64	Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_016173 PE=4 SV=1	[more]
K7KY59	7.82e-15	69.64	Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_06G296400 PE=4 SV=1	[more]
V7AGI2	1.58e-14	75.00	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_011G113100g PE=4 ...	[more]
A0A2P2P083	3.50e-14	71.43	Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1	[more]
A0A6J5WX02	3.58e-13	65.38	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS22652 PE=...	[more]

BLAST of MC02g0484 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g0484.1	MC02g0484.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane