MC02g0397 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g0397
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	F-box protein SNE-like
Location	MC02: 3412676 .. 3413122 (+)
RNA-Seq Expression	MC02g0397
Synteny	MC02g0397

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCGCATACCTGAGCGGAATGAGAAGAGGCGGAAGTTCTTAATCAATGACCATCTCGACATTCTGATAGAAATCCTGAAGCGGCTGGATGGACCGTCGATTGGCGTGGCGGCGTGCGTCTGCCACCTCTGGTGCACCATCGCTCGAAGCGAATCGCTGTGGGAACACCTCTGCTTCCGGCACGTGAGATCGCCGCTTCCTTCGTCGGTGAAGTCCGTGGTCGCCGCCCTGGGAGGGTACAAGCGGCTGTACATGGTGAGCATACGGCCGGTGCTGAGTCGACTCGGGTACTCGGACCTGGTGAGGCGAGTTTGGACTCAGGACGAGGTCCAACTTTCGCTGTCTCTGTTCTGCGTGGATTACTACGAGCGCCTCACAGGGAGCGGCAGAATCGGCGGCGATGCGTCCGCATTGTCCCTCATGTTCCTCTGCAACACCGTCAACGTC

mRNA sequence

AATCGCATACCTGAGCGGAATGAGAAGAGGCGGAAGTTCTTAATCAATGACCATCTCGACATTCTGATAGAAATCCTGAAGCGGCTGGATGGACCGTCGATTGGCGTGGCGGCGTGCGTCTGCCACCTCTGGTGCACCATCGCTCGAAGCGAATCGCTGTGGGAACACCTCTGCTTCCGGCACGTGAGATCGCCGCTTCCTTCGTCGGTGAAGTCCGTGGTCGCCGCCCTGGGAGGGTACAAGCGGCTGTACATGGTGAGCATACGGCCGGTGCTGAGTCGACTCGGGTACTCGGACCTGGTGAGGCGAGTTTGGACTCAGGACGAGGTCCAACTTTCGCTGTCTCTGTTCTGCGTGGATTACTACGAGCGCCTCACAGGGAGCGGCAGAATCGGCGGCGATGCGTCCGCATTGTCCCTCATGTTCCTCTGCAACACCGTCAACGTC

Coding sequence (CDS)

AATCGCATACCTGAGCGGAATGAGAAGAGGCGGAAGTTCTTAATCAATGACCATCTCGACATTCTGATAGAAATCCTGAAGCGGCTGGATGGACCGTCGATTGGCGTGGCGGCGTGCGTCTGCCACCTCTGGTGCACCATCGCTCGAAGCGAATCGCTGTGGGAACACCTCTGCTTCCGGCACGTGAGATCGCCGCTTCCTTCGTCGGTGAAGTCCGTGGTCGCCGCCCTGGGAGGGTACAAGCGGCTGTACATGGTGAGCATACGGCCGGTGCTGAGTCGACTCGGGTACTCGGACCTGGTGAGGCGAGTTTGGACTCAGGACGAGGTCCAACTTTCGCTGTCTCTGTTCTGCGTGGATTACTACGAGCGCCTCACAGGGAGCGGCAGAATCGGCGGCGATGCGTCCGCATTGTCCCTCATGTTCCTCTGCAACACCGTCAACGTC

Protein sequence

NRIPERNEKRRKFLINDHLDILIEILKRLDGPSIGVAACVCHLWCTIARSESLWEHLCFRHVRSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGRIGGDASALSLMFLCNTVNV

Homology

[Close]

BLAST of MC02g0397 vs. ExPASy Swiss-Prot
Match: Q9LUB6 (F-box protein SNE OS=Arabidopsis thaliana OX=3702 GN=SNE PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 6.3e-36
Identity = 84/154 (54.55%), Postives = 109/154 (70.78%), Query Frame = 0


Query: 3   IPERNEKRRK------FLINDHLDILIEILKRLDGPSIGVAACVCHLWCTIARSESLWEH 62
           + + N KR++      F INDH D+L+EIL+RLDG S+  AACVC LW  +AR++S+WE 
Sbjct: 10  VEKSNNKRQRVNQVPVFSINDHHDVLVEILRRLDGSSLCSAACVCRLWSAVARNDSIWEE 69

Query: 63  LCFRHVRSPLPS-SVKSVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLS 122
           LCFR V SP PS S++SVV+ALGGY+ LY + IRPVL+R     L + +WT+D++QLSLS
Sbjct: 70  LCFRQV-SPRPSLSLRSVVSALGGYRCLYFLCIRPVLAR-----LPKLLWTRDQLQLSLS 129

Query: 123 LFCVDYYERLTGSGRIGGDASALSLMFLCNTVNV 150
           L+CV YYERL   G   GDA   SL+FL   VNV
Sbjct: 130 LYCVHYYERLY-VGAWLGDAPPSSLIFLRKPVNV 156

[Close]

BLAST of MC02g0397 vs. ExPASy Swiss-Prot
Match: Q9STX3 (F-box protein GID2 OS=Arabidopsis thaliana OX=3702 GN=GID2 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.8e-11
Identity = 38/113 (33.63%), Postives = 71/113 (62.83%), Query Frame = 0


Query: 20  DILIEILKRLDGPSIGVAACVCHLWCTIARSESLWEHLCFRHVRS--PLPSSVKSVVAAL 79
           +++ E+LK +D  ++ +++CV  +W   A+ E LWE +C RH  +     + ++SVV AL
Sbjct: 38  NLVYEVLKHVDAKTLAMSSCVSKIWHKTAQDERLWELICTRHWTNIGCGQNQLRSVVLAL 97

Query: 80  GGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGR 131
           GG++RL+ + + P LS+       R  + +DE++L+LSL  + YYE+++ + R
Sbjct: 98  GGFRRLHSLYLWP-LSKPN----PRARFGKDELKLTLSLLSIRYYEKMSFTKR 145

[Close]

BLAST of MC02g0397 vs. ExPASy Swiss-Prot
Match: Q7XAK4 (F-box protein GID2 OS=Oryza sativa subsp. japonica OX=39947 GN=GID2 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.5e-10
Identity = 39/115 (33.91%), Postives = 64/115 (55.65%), Query Frame = 0


Query: 20  DILIEILKRLDGPSIGVAACVCHLWCTIARSESLWEHLCFRHVRSP--LPSSVKSVVAAL 79
           D++ E+L+R +  ++  AACV   W  +A  E LWE  C R   +       +++VV +L
Sbjct: 79  DLVFEVLRRAEARTLAAAACVSRGWRQLAEDERLWEAACVREWANLGFSERQLRAVVLSL 138

Query: 80  GGYKRLYMVSIRP-------VLSRLGYSDLVRRVWTQDEVQLSLSLFCVDYYERL 126
           GG++RL+ V IRP       V  + G      R+  +D+VQLSLSLF + +++ +
Sbjct: 139 GGFRRLHAVYIRPLQWRGAGVPRQQGRRQPPVRL-GRDQVQLSLSLFSIGFFQNM 192

[Close]

BLAST of MC02g0397 vs. NCBI nr
Match: XP_022140541.1 (F-box protein SNE-like [Momordica charantia])

HSP 1 Score: 305 bits (780), Expect = 1.89e-104
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   NRIPERNEKRRKFLINDHLDILIEILKRLDGPSIGVAACVCHLWCTIARSESLWEHLCFR 60
           NRIPERNEKRRKFLINDHLDILIEILKRLDGPSIGVAACVCHLWCTIARSESLWEHLCFR
Sbjct: 3   NRIPERNEKRRKFLINDHLDILIEILKRLDGPSIGVAACVCHLWCTIARSESLWEHLCFR 62

Query: 61  HVRSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVD 120
           HVRSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVD
Sbjct: 63  HVRSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVD 122

Query: 121 YYERLTGSGRIGGDASALSLMFLCNTVNV 149
           YYERLTGSGRIGGDASALSLMFLCNTVNV
Sbjct: 123 YYERLTGSGRIGGDASALSLMFLCNTVNV 151

[Close]

BLAST of MC02g0397 vs. NCBI nr
Match: XP_038902594.1 (F-box protein SNE [Benincasa hispida])

HSP 1 Score: 284 bits (727), Expect = 2.38e-96
Identity = 139/149 (93.29%), Postives = 143/149 (95.97%), Query Frame = 0


Query: 1   NRIPERNEKRRKFLINDHLDILIEILKRLDGPSIGVAACVCHLWCTIARSESLWEHLCFR 60
           N IPE NEKRRKFLIND+LDILIEILKRLDGPS+GVA CVC LWCTIARSES+WE +CFR
Sbjct: 4   NHIPEPNEKRRKFLINDNLDILIEILKRLDGPSLGVATCVCRLWCTIARSESVWEQVCFR 63

Query: 61  HVRSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVD 120
           HV SPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVD
Sbjct: 64  HVTSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVD 123

Query: 121 YYERLTGSGRIGGDASALSLMFLCNTVNV 149
           YYERLTGSGRIGGDASALSLMFLCNTVNV
Sbjct: 124 YYERLTGSGRIGGDASALSLMFLCNTVNV 152

[Close]

BLAST of MC02g0397 vs. NCBI nr
Match: KAA0060791.1 (F-box protein SNE [Cucumis melo var. makuwa] >TYK11951.1 F-box protein SNE [Cucumis melo var. makuwa])

HSP 1 Score: 284 bits (727), Expect = 2.38e-96
Identity = 137/149 (91.95%), Postives = 145/149 (97.32%), Query Frame = 0


Query: 1   NRIPERNEKRRKFLINDHLDILIEILKRLDGPSIGVAACVCHLWCTIARSESLWEHLCFR 60
           N IPE+NEK+RKFLIND+LDILIEILKRLDGPS+GVA CVC LWCTIARSES+WE +CFR
Sbjct: 4   NHIPEQNEKKRKFLINDNLDILIEILKRLDGPSLGVATCVCRLWCTIARSESVWEQVCFR 63

Query: 61  HVRSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVD 120
           HV+SPLPSSVK+VVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVD
Sbjct: 64  HVKSPLPSSVKTVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVD 123

Query: 121 YYERLTGSGRIGGDASALSLMFLCNTVNV 149
           YYERLTGSGRIGGDASALSLMFLCNTVNV
Sbjct: 124 YYERLTGSGRIGGDASALSLMFLCNTVNV 152

[Close]

BLAST of MC02g0397 vs. NCBI nr
Match: XP_016903159.1 (PREDICTED: F-box protein SNE [Cucumis melo])

HSP 1 Score: 283 bits (725), Expect = 4.80e-96
Identity = 137/149 (91.95%), Postives = 144/149 (96.64%), Query Frame = 0


Query: 1   NRIPERNEKRRKFLINDHLDILIEILKRLDGPSIGVAACVCHLWCTIARSESLWEHLCFR 60
           N IPE+NEK+RKFLIND LDILIEILKRLDGPS+GVA CVC LWCTIARSES+WE +CFR
Sbjct: 4   NHIPEQNEKKRKFLINDDLDILIEILKRLDGPSLGVATCVCRLWCTIARSESVWEQVCFR 63

Query: 61  HVRSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVD 120
           HV+SPLPSSVK+VVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVD
Sbjct: 64  HVKSPLPSSVKTVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVD 123

Query: 121 YYERLTGSGRIGGDASALSLMFLCNTVNV 149
           YYERLTGSGRIGGDASALSLMFLCNTVNV
Sbjct: 124 YYERLTGSGRIGGDASALSLMFLCNTVNV 152

[Close]

BLAST of MC02g0397 vs. NCBI nr
Match: XP_004140002.1 (F-box protein SNE [Cucumis sativus] >XP_031743985.1 F-box protein SNE [Cucumis sativus] >KGN46603.1 hypothetical protein Csa_005230 [Cucumis sativus])

HSP 1 Score: 283 bits (723), Expect = 9.68e-96
Identity = 137/149 (91.95%), Postives = 144/149 (96.64%), Query Frame = 0


Query: 1   NRIPERNEKRRKFLINDHLDILIEILKRLDGPSIGVAACVCHLWCTIARSESLWEHLCFR 60
           N IPE NEKRRKFLIND+LDILIEILKRLDGPS+GVA CVC LWCTIARSES+WE +CFR
Sbjct: 4   NHIPEPNEKRRKFLINDNLDILIEILKRLDGPSLGVATCVCRLWCTIARSESVWEQVCFR 63

Query: 61  HVRSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVD 120
           HV+SPLPSSVK+VVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVD
Sbjct: 64  HVKSPLPSSVKTVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVD 123

Query: 121 YYERLTGSGRIGGDASALSLMFLCNTVNV 149
           YYERLTGSGRIGG+ASALSLMFLCNTVNV
Sbjct: 124 YYERLTGSGRIGGEASALSLMFLCNTVNV 152

[Close]

BLAST of MC02g0397 vs. ExPASy TrEMBL
Match: A0A6J1CGD7 (F-box protein SNE-like OS=Momordica charantia OX=3673 GN=LOC111011176 PE=4 SV=1)

HSP 1 Score: 305 bits (780), Expect = 9.17e-105
Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0


Query: 1   NRIPERNEKRRKFLINDHLDILIEILKRLDGPSIGVAACVCHLWCTIARSESLWEHLCFR 60
           NRIPERNEKRRKFLINDHLDILIEILKRLDGPSIGVAACVCHLWCTIARSESLWEHLCFR
Sbjct: 3   NRIPERNEKRRKFLINDHLDILIEILKRLDGPSIGVAACVCHLWCTIARSESLWEHLCFR 62

Query: 61  HVRSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVD 120
           HVRSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVD
Sbjct: 63  HVRSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVD 122

Query: 121 YYERLTGSGRIGGDASALSLMFLCNTVNV 149
           YYERLTGSGRIGGDASALSLMFLCNTVNV
Sbjct: 123 YYERLTGSGRIGGDASALSLMFLCNTVNV 151

[Close]

BLAST of MC02g0397 vs. ExPASy TrEMBL
Match: A0A5A7V4V6 (F-box protein SNE OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G001340 PE=4 SV=1)

HSP 1 Score: 284 bits (727), Expect = 1.15e-96
Identity = 137/149 (91.95%), Postives = 145/149 (97.32%), Query Frame = 0


Query: 1   NRIPERNEKRRKFLINDHLDILIEILKRLDGPSIGVAACVCHLWCTIARSESLWEHLCFR 60
           N IPE+NEK+RKFLIND+LDILIEILKRLDGPS+GVA CVC LWCTIARSES+WE +CFR
Sbjct: 4   NHIPEQNEKKRKFLINDNLDILIEILKRLDGPSLGVATCVCRLWCTIARSESVWEQVCFR 63

Query: 61  HVRSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVD 120
           HV+SPLPSSVK+VVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVD
Sbjct: 64  HVKSPLPSSVKTVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVD 123

Query: 121 YYERLTGSGRIGGDASALSLMFLCNTVNV 149
           YYERLTGSGRIGGDASALSLMFLCNTVNV
Sbjct: 124 YYERLTGSGRIGGDASALSLMFLCNTVNV 152

[Close]

BLAST of MC02g0397 vs. ExPASy TrEMBL
Match: A0A1S4E4K7 (F-box protein SNE OS=Cucumis melo OX=3656 GN=LOC103502114 PE=4 SV=1)

HSP 1 Score: 283 bits (725), Expect = 2.32e-96
Identity = 137/149 (91.95%), Postives = 144/149 (96.64%), Query Frame = 0


Query: 1   NRIPERNEKRRKFLINDHLDILIEILKRLDGPSIGVAACVCHLWCTIARSESLWEHLCFR 60
           N IPE+NEK+RKFLIND LDILIEILKRLDGPS+GVA CVC LWCTIARSES+WE +CFR
Sbjct: 4   NHIPEQNEKKRKFLINDDLDILIEILKRLDGPSLGVATCVCRLWCTIARSESVWEQVCFR 63

Query: 61  HVRSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVD 120
           HV+SPLPSSVK+VVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVD
Sbjct: 64  HVKSPLPSSVKTVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVD 123

Query: 121 YYERLTGSGRIGGDASALSLMFLCNTVNV 149
           YYERLTGSGRIGGDASALSLMFLCNTVNV
Sbjct: 124 YYERLTGSGRIGGDASALSLMFLCNTVNV 152

[Close]

BLAST of MC02g0397 vs. ExPASy TrEMBL
Match: A0A0A0KAT5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G111930 PE=4 SV=1)

HSP 1 Score: 283 bits (723), Expect = 4.69e-96
Identity = 137/149 (91.95%), Postives = 144/149 (96.64%), Query Frame = 0


Query: 1   NRIPERNEKRRKFLINDHLDILIEILKRLDGPSIGVAACVCHLWCTIARSESLWEHLCFR 60
           N IPE NEKRRKFLIND+LDILIEILKRLDGPS+GVA CVC LWCTIARSES+WE +CFR
Sbjct: 4   NHIPEPNEKRRKFLINDNLDILIEILKRLDGPSLGVATCVCRLWCTIARSESVWEQVCFR 63

Query: 61  HVRSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVD 120
           HV+SPLPSSVK+VVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVD
Sbjct: 64  HVKSPLPSSVKTVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVD 123

Query: 121 YYERLTGSGRIGGDASALSLMFLCNTVNV 149
           YYERLTGSGRIGG+ASALSLMFLCNTVNV
Sbjct: 124 YYERLTGSGRIGGEASALSLMFLCNTVNV 152

[Close]

BLAST of MC02g0397 vs. ExPASy TrEMBL
Match: A0A6J1I140 (F-box protein SNE-like OS=Cucurbita maxima OX=3661 GN=LOC111469889 PE=4 SV=1)

HSP 1 Score: 282 bits (722), Expect = 6.66e-96
Identity = 136/149 (91.28%), Postives = 144/149 (96.64%), Query Frame = 0


Query: 1   NRIPERNEKRRKFLINDHLDILIEILKRLDGPSIGVAACVCHLWCTIARSESLWEHLCFR 60
           N IPE NEKRRKFLIND+LDILIEILKRLDGPS+GVAACVC LWCTIAR+ES+WEH+CFR
Sbjct: 4   NHIPEANEKRRKFLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIARNESVWEHVCFR 63

Query: 61  HVRSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVD 120
           HV SPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGYS++VRRVWTQDEVQLSLSLFCVD
Sbjct: 64  HVTSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGYSEVVRRVWTQDEVQLSLSLFCVD 123

Query: 121 YYERLTGSGRIGGDASALSLMFLCNTVNV 149
           YYERLTGSGR+ GDASALSLMFLCNTVNV
Sbjct: 124 YYERLTGSGRLSGDASALSLMFLCNTVNV 152

[Close]

BLAST of MC02g0397 vs. TAIR 10
Match: AT5G48170.1 (F-box family protein )

HSP 1 Score: 151.8 bits (382), Expect = 4.5e-37
Identity = 84/154 (54.55%), Postives = 109/154 (70.78%), Query Frame = 0


Query: 3   IPERNEKRRK------FLINDHLDILIEILKRLDGPSIGVAACVCHLWCTIARSESLWEH 62
           + + N KR++      F INDH D+L+EIL+RLDG S+  AACVC LW  +AR++S+WE 
Sbjct: 10  VEKSNNKRQRVNQVPVFSINDHHDVLVEILRRLDGSSLCSAACVCRLWSAVARNDSIWEE 69

Query: 63  LCFRHVRSPLPS-SVKSVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLS 122
           LCFR V SP PS S++SVV+ALGGY+ LY + IRPVL+R     L + +WT+D++QLSLS
Sbjct: 70  LCFRQV-SPRPSLSLRSVVSALGGYRCLYFLCIRPVLAR-----LPKLLWTRDQLQLSLS 129

Query: 123 LFCVDYYERLTGSGRIGGDASALSLMFLCNTVNV 150
           L+CV YYERL   G   GDA   SL+FL   VNV
Sbjct: 130 LYCVHYYERLY-VGAWLGDAPPSSLIFLRKPVNV 156

[Close]

BLAST of MC02g0397 vs. TAIR 10
Match: AT4G24210.1 (F-box family protein )

HSP 1 Score: 70.5 bits (171), Expect = 1.3e-12
Identity = 38/113 (33.63%), Postives = 71/113 (62.83%), Query Frame = 0


Query: 20  DILIEILKRLDGPSIGVAACVCHLWCTIARSESLWEHLCFRHVRS--PLPSSVKSVVAAL 79
           +++ E+LK +D  ++ +++CV  +W   A+ E LWE +C RH  +     + ++SVV AL
Sbjct: 38  NLVYEVLKHVDAKTLAMSSCVSKIWHKTAQDERLWELICTRHWTNIGCGQNQLRSVVLAL 97

Query: 80  GGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGR 131
           GG++RL+ + + P LS+       R  + +DE++L+LSL  + YYE+++ + R
Sbjct: 98  GGFRRLHSLYLWP-LSKPN----PRARFGKDELKLTLSLLSIRYYEKMSFTKR 145

The following BLAST results are available for this feature:

BLAST of MC02g0397 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUB6	6.3e-36	54.55	F-box protein SNE OS=Arabidopsis thaliana OX=3702 GN=SNE PE=1 SV=1	[more]
Q9STX3	1.8e-11	33.63	F-box protein GID2 OS=Arabidopsis thaliana OX=3702 GN=GID2 PE=1 SV=1	[more]
Q7XAK4	3.5e-10	33.91	F-box protein GID2 OS=Oryza sativa subsp. japonica OX=39947 GN=GID2 PE=1 SV=1	[more]

BLAST of MC02g0397 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140541.1	1.89e-104	100.00	F-box protein SNE-like [Momordica charantia]	[more]
XP_038902594.1	2.38e-96	93.29	F-box protein SNE [Benincasa hispida]	[more]
KAA0060791.1	2.38e-96	91.95	F-box protein SNE [Cucumis melo var. makuwa] >TYK11951.1 F-box protein SNE [Cucu...	[more]
XP_016903159.1	4.80e-96	91.95	PREDICTED: F-box protein SNE [Cucumis melo]	[more]
XP_004140002.1	9.68e-96	91.95	F-box protein SNE [Cucumis sativus] >XP_031743985.1 F-box protein SNE [Cucumis s...	[more]

BLAST of MC02g0397 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CGD7	9.17e-105	100.00	F-box protein SNE-like OS=Momordica charantia OX=3673 GN=LOC111011176 PE=4 SV=1	[more]
A0A5A7V4V6	1.15e-96	91.95	F-box protein SNE OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00...	[more]
A0A1S4E4K7	2.32e-96	91.95	F-box protein SNE OS=Cucumis melo OX=3656 GN=LOC103502114 PE=4 SV=1	[more]
A0A0A0KAT5	4.69e-96	91.95	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G111930 PE=4 ...	[more]
A0A6J1I140	6.66e-96	91.28	F-box protein SNE-like OS=Cucurbita maxima OX=3661 GN=LOC111469889 PE=4 SV=1	[more]

BLAST of MC02g0397 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48170.1	4.5e-37	54.55	F-box family protein	[more]
AT4G24210.1	1.3e-12	33.63	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 20..60 e-value: 4.0E-8 score: 33.0
None	No IPR available	GENE3D	1.20.1280.50		coord: 5..89 e-value: 1.0E-9 score: 40.2
IPR044184	F-box protein SNE	PANTHER	PTHR47750	F-BOX PROTEIN SNE	coord: 5..149
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 20..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g0397.1	MC02g0397.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009937	regulation of gibberellic acid mediated signaling pathway
cellular_component	GO:0019005	SCF ubiquitin ligase complex
molecular_function	GO:0005515	protein binding