MC02g0384 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g0384
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	RING-type domain-containing protein
Location	MC02: 3340651 .. 3341106 (+)
RNA-Seq Expression	MC02g0384
Synteny	MC02g0384

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCCTCTCCAGCCTTCCTGCCCCGTCTGAAGGTGTACTGGGTGTGATCCTTGTAAATACAGCCCTATCAATTTCCATCTTCAAAGGTTTAGTTCGATCGATTCTCCATGTTGTTGGCATCCATCTCTCGTCGCCTACATCGTCAGCAGACTCCATGGAGAATGCTCCTGAATCTGTAGAGTTCCGTCTTAACCCGAATGGAAGTTACATTGAAGAGTTCCGCAGCCGGATCCCAGCAATTCTGTACGACAAAGTTCACAGCTGCAAATGGCTAGAACAGGACTGCTCAGTCTGCCTAACCCAGTTTGAACCTGAATCAGAGATAAACCATTTATCTTGTGGCCATCTTTTCCACAGAGTGTGCTTGGAGAAGTGGCTGGACTACTGGAACCTTACGTGCCCACTGTGCCGGACTCCATTAATGCCCGAAGAAGAGACAGCTTCCTGCTTCTGG

mRNA sequence

ATGGGCCTCTCCAGCCTTCCTGCCCCGTCTGAAGGTGTACTGGGTGTGATCCTTGTAAATACAGCCCTATCAATTTCCATCTTCAAAGGTTTAGTTCGATCGATTCTCCATGTTGTTGGCATCCATCTCTCGTCGCCTACATCGTCAGCAGACTCCATGGAGAATGCTCCTGAATCTGTAGAGTTCCGTCTTAACCCGAATGGAAGTTACATTGAAGAGTTCCGCAGCCGGATCCCAGCAATTCTGTACGACAAAGTTCACAGCTGCAAATGGCTAGAACAGGACTGCTCAGTCTGCCTAACCCAGTTTGAACCTGAATCAGAGATAAACCATTTATCTTGTGGCCATCTTTTCCACAGAGTGTGCTTGGAGAAGTGGCTGGACTACTGGAACCTTACGTGCCCACTGTGCCGGACTCCATTAATGCCCGAAGAAGAGACAGCTTCCTGCTTCTGG

Coding sequence (CDS)

ATGGGCCTCTCCAGCCTTCCTGCCCCGTCTGAAGGTGTACTGGGTGTGATCCTTGTAAATACAGCCCTATCAATTTCCATCTTCAAAGGTTTAGTTCGATCGATTCTCCATGTTGTTGGCATCCATCTCTCGTCGCCTACATCGTCAGCAGACTCCATGGAGAATGCTCCTGAATCTGTAGAGTTCCGTCTTAACCCGAATGGAAGTTACATTGAAGAGTTCCGCAGCCGGATCCCAGCAATTCTGTACGACAAAGTTCACAGCTGCAAATGGCTAGAACAGGACTGCTCAGTCTGCCTAACCCAGTTTGAACCTGAATCAGAGATAAACCATTTATCTTGTGGCCATCTTTTCCACAGAGTGTGCTTGGAGAAGTGGCTGGACTACTGGAACCTTACGTGCCCACTGTGCCGGACTCCATTAATGCCCGAAGAAGAGACAGCTTCCTGCTTCTGG

Protein sequence

MGLSSLPAPSEGVLGVILVNTALSISIFKGLVRSILHVVGIHLSSPTSSADSMENAPESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSCGHLFHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW

Homology

[Close]

BLAST of MC02g0384 vs. ExPASy Swiss-Prot
Match: Q9SI09 (Probable E3 ubiquitin-protein ligase XERICO OS=Arabidopsis thaliana OX=3702 GN=XERICO PE=1 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 2.9e-44
Identity = 93/158 (58.86%), Postives = 117/158 (74.05%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGLVRSILHVVGIHL----SSPTSSADSMENA 60
           MGLSSLP PSEG+L VILVNTALSISI KG+VRS L +VGI L    SSP+S   S EN+
Sbjct: 1   MGLSSLPGPSEGMLCVILVNTALSISIVKGIVRSFLGIVGISLSPSSSSPSSVTVSSENS 60

Query: 61  --PESVEFRLNPNGSYIEEFRSRIPAILYDKVHSC-KWLEQDCSVCLTQFEPESEINHLS 120
              ES +FR+    SY+EEFR+R P + ++ +  C K  + +CSVCL++F+ +SEIN L 
Sbjct: 61  STSESFDFRVCQPESYLEEFRNRTPTLRFESLCRCKKQADNECSVCLSKFQGDSEINKLK 120

Query: 121 CGHLFHRVCLEKWLDYWNLTCPLCRTPL--MPEEETAS 150
           CGHLFH+ CLEKW+DYWN+TCPLCRTPL  +PE+   S
Sbjct: 121 CGHLFHKTCLEKWIDYWNITCPLCRTPLVVVPEDHQLS 158

[Close]

BLAST of MC02g0384 vs. ExPASy Swiss-Prot
Match: Q9XF92 (Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH1 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.3e-14
Identity = 34/73 (46.58%), Postives = 53/73 (72.60%), Query Frame = 0


Query: 75  RSRIPAILYDKV-HSCKWLEQDCSVCLTQFEPESEINHL-SCGHLFHRVCLEKWLDYWNL 134
           R  +P I ++++ +S + L ++C+VCL +FE E EI  L +C H+FHR CL++W+D+   
Sbjct: 72  REILPVIKFEELTNSGEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRSCLDRWMDHDQK 131

Query: 135 TCPLCRTPLMPEE 146
           TCPLCRTP +P+E
Sbjct: 132 TCPLCRTPFVPDE 144

[Close]

BLAST of MC02g0384 vs. ExPASy Swiss-Prot
Match: Q9ZU51 (E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana OX=3702 GN=RHA2B PE=1 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 7.2e-11
Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 0


Query: 95  DCSVCLTQFEPESEINHLSCGHLFHRVCLEKWLDYWNLTCPLCRTPLMP 144
           DC VCL++ +   E+  L C H+FH+ CLE WL + N  CPLCR+PL+P
Sbjct: 73  DCIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRSPLLP 121

[Close]

BLAST of MC02g0384 vs. ExPASy Swiss-Prot
Match: Q9ZT50 (E3 ubiquitin-protein ligase RHA2A OS=Arabidopsis thaliana OX=3702 GN=RHA2A PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 6.1e-10
Identity = 24/51 (47.06%), Postives = 35/51 (68.63%), Query Frame = 0


Query: 95  DCSVCLTQFEPESEINHLSCGHLFHRVCLEKWLDYWNLTCPLCRTPLMPEE 146
           DC VCL++ +   E+  L C H+FH+ CLE WL  +N TCPLCR+ L+ ++
Sbjct: 85  DCVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQFNFTCPLCRSALVSDD 135

[Close]

BLAST of MC02g0384 vs. ExPASy Swiss-Prot
Match: Q9SUS5 (E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis thaliana OX=3702 GN=RHA1B PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.0e-09
Identity = 36/137 (26.28%), Postives = 68/137 (49.64%), Query Frame = 0


Query: 18  LVNTALSISIFKGLVRSILHVVGIHLSSPTSSADSMENAPESVEFRLNPNGSYIEEFRSR 77
           ++ T   I  F+ +V ++   +G+    P+    +  +  +     L+ + +   E    
Sbjct: 16  VLKTLYVIGFFRDMVDALCPYIGL----PSFLDHNETSRSDPTRLALSTSATLANEL--- 75

Query: 78  IPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHL-SCGHLFHRVCLEKWL-DYWNLTCP 137
           IP + +  + +    E  C+VCL+ F  + +I  L  CGH+FH  CL++W+ D   +TCP
Sbjct: 76  IPVVRFSDLLTDP--EDCCTVCLSDFVSDDKIRQLPKCGHVFHHRCLDRWIVDCNKITCP 135

Query: 138 LCRTPLMPEEETASCFW 153
           +CR   +PEE++    W
Sbjct: 136 ICRNRFLPEEKSTPFDW 143

[Close]

BLAST of MC02g0384 vs. NCBI nr
Match: XP_022140382.1 (probable E3 ubiquitin-protein ligase XERICO [Momordica charantia] >XP_022140383.1 probable E3 ubiquitin-protein ligase XERICO [Momordica charantia])

HSP 1 Score: 317 bits (813), Expect = 2.05e-109
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGLVRSILHVVGIHLSSPTSSADSMENAPESV 60
           MGLSSLPAPSEGVLGVILVNTALSISIFKGLVRSILHVVGIHLSSPTSSADSMENAPESV
Sbjct: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGLVRSILHVVGIHLSSPTSSADSMENAPESV 60

Query: 61  EFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSCGHLFHR 120
           EFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSCGHLFHR
Sbjct: 61  EFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSCGHLFHR 120

Query: 121 VCLEKWLDYWNLTCPLCRTPLMPEEETASCFW 152
           VCLEKWLDYWNLTCPLCRTPLMPEEETASCFW
Sbjct: 121 VCLEKWLDYWNLTCPLCRTPLMPEEETASCFW 152

[Close]

BLAST of MC02g0384 vs. NCBI nr
Match: XP_004139989.1 (probable E3 ubiquitin-protein ligase XERICO [Cucumis sativus] >XP_031742532.1 probable E3 ubiquitin-protein ligase XERICO [Cucumis sativus] >XP_031742533.1 probable E3 ubiquitin-protein ligase XERICO [Cucumis sativus] >KGN46618.1 hypothetical protein Csa_005123 [Cucumis sativus])

HSP 1 Score: 295 bits (755), Expect = 1.60e-100
Identity = 144/155 (92.90%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGLVRSILHVVGIHLSS-PT--SSADSMENAP 60
           MGLSSLPAPSEGVLGVILVNTALSISIFKG+VRSILHVVGIHLSS PT  SS DSMENAP
Sbjct: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHLSSSPTLPSSPDSMENAP 60

Query: 61  ESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSCGHL 120
           ES+EF LNPNGSYIEEFRSRIPAIL+DKV SCKWLE DCSVCLTQFEPESEINHLSCGHL
Sbjct: 61  ESIEFHLNPNGSYIEEFRSRIPAILFDKVRSCKWLEHDCSVCLTQFEPESEINHLSCGHL 120

Query: 121 FHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW 152
           FHRVCLEKWLDYWNLTCPLCRTPLMPEE+TASCFW
Sbjct: 121 FHRVCLEKWLDYWNLTCPLCRTPLMPEEDTASCFW 155

[Close]

BLAST of MC02g0384 vs. NCBI nr
Match: XP_008448128.1 (PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Cucumis melo] >KAA0060845.1 putative E3 ubiquitin-protein ligase XERICO [Cucumis melo var. makuwa] >TYK27107.1 putative E3 ubiquitin-protein ligase XERICO [Cucumis melo var. makuwa])

HSP 1 Score: 292 bits (747), Expect = 2.75e-99
Identity = 141/156 (90.38%), Postives = 146/156 (93.59%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGLVRSILHVVGIHLSSPT----SSADSMENA 60
           MGLSSLPAPSEGVLGVILVNTALSISIFKG+VRSILHVVGIHLSS +    SS DSMENA
Sbjct: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHLSSSSATLPSSPDSMENA 60

Query: 61  PESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSCGH 120
           PES+EF LNPNGSYIEEFRSRIPAIL+DKV SCKWLE DCSVCLTQFEPESEINHLSCGH
Sbjct: 61  PESIEFHLNPNGSYIEEFRSRIPAILFDKVRSCKWLEHDCSVCLTQFEPESEINHLSCGH 120

Query: 121 LFHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW 152
           LFH VCLEKWLDYWNLTCPLCRTPLMPEE+TASCFW
Sbjct: 121 LFHSVCLEKWLDYWNLTCPLCRTPLMPEEDTASCFW 156

[Close]

BLAST of MC02g0384 vs. NCBI nr
Match: XP_022947327.1 (probable E3 ubiquitin-protein ligase XERICO [Cucurbita moschata] >XP_022947328.1 probable E3 ubiquitin-protein ligase XERICO [Cucurbita moschata] >KAG6604923.1 putative E3 ubiquitin-protein ligase XERICO, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027002.1 putative E3 ubiquitin-protein ligase XERICO, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 291 bits (745), Expect = 4.67e-99
Identity = 137/152 (90.13%), Postives = 147/152 (96.71%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGLVRSILHVVGIHLSSPTSSADSMENAPESV 60
           MGLSSLPAPSEGVLGVILVNTA+SISIFKG+VRSILHVVGIHLS+P+SS DSMEN+PES+
Sbjct: 1   MGLSSLPAPSEGVLGVILVNTAISISIFKGIVRSILHVVGIHLSTPSSS-DSMENSPESI 60

Query: 61  EFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSCGHLFHR 120
           +F LNPNG YIEEFRSRIPAIL+DKV SCKWLE DCSVCLTQFEPESEINHLSCGH+FHR
Sbjct: 61  DFCLNPNGGYIEEFRSRIPAILFDKVRSCKWLEHDCSVCLTQFEPESEINHLSCGHVFHR 120

Query: 121 VCLEKWLDYWNLTCPLCRTPLMPEEETASCFW 152
           VCLEKWLDYWN+TCPLCRTPLMPEEETASCFW
Sbjct: 121 VCLEKWLDYWNITCPLCRTPLMPEEETASCFW 151

[Close]

BLAST of MC02g0384 vs. NCBI nr
Match: XP_022971123.1 (probable E3 ubiquitin-protein ligase XERICO [Cucurbita maxima] >XP_022971124.1 probable E3 ubiquitin-protein ligase XERICO [Cucurbita maxima])

HSP 1 Score: 291 bits (744), Expect = 6.63e-99
Identity = 137/152 (90.13%), Postives = 147/152 (96.71%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGLVRSILHVVGIHLSSPTSSADSMENAPESV 60
           MGLSSLPAPSEGVLGVILVNTA+SISIFKG+VRSILHVVGIHLS+P+SS DSMEN+PES+
Sbjct: 1   MGLSSLPAPSEGVLGVILVNTAISISIFKGIVRSILHVVGIHLSTPSSS-DSMENSPESI 60

Query: 61  EFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSCGHLFHR 120
           +F LNPNG YIEEFRSRIPAIL+DKV SCKWLE DCSVCLTQFEPESEINHLSCGH+FHR
Sbjct: 61  DFCLNPNGGYIEEFRSRIPAILFDKVRSCKWLEHDCSVCLTQFEPESEINHLSCGHVFHR 120

Query: 121 VCLEKWLDYWNLTCPLCRTPLMPEEETASCFW 152
           VCLEKWLDYWN+TCPLCRTPLMPEEETASCFW
Sbjct: 121 VCLEKWLDYWNVTCPLCRTPLMPEEETASCFW 151

[Close]

BLAST of MC02g0384 vs. ExPASy TrEMBL
Match: A0A6J1CGP1 (probable E3 ubiquitin-protein ligase XERICO OS=Momordica charantia OX=3673 GN=LOC111011070 PE=4 SV=1)

HSP 1 Score: 317 bits (813), Expect = 9.94e-110
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGLVRSILHVVGIHLSSPTSSADSMENAPESV 60
           MGLSSLPAPSEGVLGVILVNTALSISIFKGLVRSILHVVGIHLSSPTSSADSMENAPESV
Sbjct: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGLVRSILHVVGIHLSSPTSSADSMENAPESV 60

Query: 61  EFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSCGHLFHR 120
           EFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSCGHLFHR
Sbjct: 61  EFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSCGHLFHR 120

Query: 121 VCLEKWLDYWNLTCPLCRTPLMPEEETASCFW 152
           VCLEKWLDYWNLTCPLCRTPLMPEEETASCFW
Sbjct: 121 VCLEKWLDYWNLTCPLCRTPLMPEEETASCFW 152

[Close]

BLAST of MC02g0384 vs. ExPASy TrEMBL
Match: A0A0A0KAU4 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G113550 PE=4 SV=1)

HSP 1 Score: 295 bits (755), Expect = 7.74e-101
Identity = 144/155 (92.90%), Postives = 148/155 (95.48%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGLVRSILHVVGIHLSS-PT--SSADSMENAP 60
           MGLSSLPAPSEGVLGVILVNTALSISIFKG+VRSILHVVGIHLSS PT  SS DSMENAP
Sbjct: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHLSSSPTLPSSPDSMENAP 60

Query: 61  ESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSCGHL 120
           ES+EF LNPNGSYIEEFRSRIPAIL+DKV SCKWLE DCSVCLTQFEPESEINHLSCGHL
Sbjct: 61  ESIEFHLNPNGSYIEEFRSRIPAILFDKVRSCKWLEHDCSVCLTQFEPESEINHLSCGHL 120

Query: 121 FHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW 152
           FHRVCLEKWLDYWNLTCPLCRTPLMPEE+TASCFW
Sbjct: 121 FHRVCLEKWLDYWNLTCPLCRTPLMPEEDTASCFW 155

[Close]

BLAST of MC02g0384 vs. ExPASy TrEMBL
Match: A0A5D3DTM0 (Putative E3 ubiquitin-protein ligase XERICO OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2527G00040 PE=4 SV=1)

HSP 1 Score: 292 bits (747), Expect = 1.33e-99
Identity = 141/156 (90.38%), Postives = 146/156 (93.59%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGLVRSILHVVGIHLSSPT----SSADSMENA 60
           MGLSSLPAPSEGVLGVILVNTALSISIFKG+VRSILHVVGIHLSS +    SS DSMENA
Sbjct: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHLSSSSATLPSSPDSMENA 60

Query: 61  PESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSCGH 120
           PES+EF LNPNGSYIEEFRSRIPAIL+DKV SCKWLE DCSVCLTQFEPESEINHLSCGH
Sbjct: 61  PESIEFHLNPNGSYIEEFRSRIPAILFDKVRSCKWLEHDCSVCLTQFEPESEINHLSCGH 120

Query: 121 LFHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW 152
           LFH VCLEKWLDYWNLTCPLCRTPLMPEE+TASCFW
Sbjct: 121 LFHSVCLEKWLDYWNLTCPLCRTPLMPEEDTASCFW 156

[Close]

BLAST of MC02g0384 vs. ExPASy TrEMBL
Match: A0A1S3BIY9 (probable E3 ubiquitin-protein ligase XERICO OS=Cucumis melo OX=3656 GN=LOC103490418 PE=4 SV=1)

HSP 1 Score: 292 bits (747), Expect = 1.33e-99
Identity = 141/156 (90.38%), Postives = 146/156 (93.59%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGLVRSILHVVGIHLSSPT----SSADSMENA 60
           MGLSSLPAPSEGVLGVILVNTALSISIFKG+VRSILHVVGIHLSS +    SS DSMENA
Sbjct: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGIVRSILHVVGIHLSSSSATLPSSPDSMENA 60

Query: 61  PESVEFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSCGH 120
           PES+EF LNPNGSYIEEFRSRIPAIL+DKV SCKWLE DCSVCLTQFEPESEINHLSCGH
Sbjct: 61  PESIEFHLNPNGSYIEEFRSRIPAILFDKVRSCKWLEHDCSVCLTQFEPESEINHLSCGH 120

Query: 121 LFHRVCLEKWLDYWNLTCPLCRTPLMPEEETASCFW 152
           LFH VCLEKWLDYWNLTCPLCRTPLMPEE+TASCFW
Sbjct: 121 LFHSVCLEKWLDYWNLTCPLCRTPLMPEEDTASCFW 156

[Close]

BLAST of MC02g0384 vs. ExPASy TrEMBL
Match: A0A6J1G653 (probable E3 ubiquitin-protein ligase XERICO OS=Cucurbita moschata OX=3662 GN=LOC111451222 PE=4 SV=1)

HSP 1 Score: 291 bits (745), Expect = 2.26e-99
Identity = 137/152 (90.13%), Postives = 147/152 (96.71%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGLVRSILHVVGIHLSSPTSSADSMENAPESV 60
           MGLSSLPAPSEGVLGVILVNTA+SISIFKG+VRSILHVVGIHLS+P+SS DSMEN+PES+
Sbjct: 1   MGLSSLPAPSEGVLGVILVNTAISISIFKGIVRSILHVVGIHLSTPSSS-DSMENSPESI 60

Query: 61  EFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHLSCGHLFHR 120
           +F LNPNG YIEEFRSRIPAIL+DKV SCKWLE DCSVCLTQFEPESEINHLSCGH+FHR
Sbjct: 61  DFCLNPNGGYIEEFRSRIPAILFDKVRSCKWLEHDCSVCLTQFEPESEINHLSCGHVFHR 120

Query: 121 VCLEKWLDYWNLTCPLCRTPLMPEEETASCFW 152
           VCLEKWLDYWN+TCPLCRTPLMPEEETASCFW
Sbjct: 121 VCLEKWLDYWNITCPLCRTPLMPEEETASCFW 151

[Close]

BLAST of MC02g0384 vs. TAIR 10
Match: AT2G04240.1 (RING/U-box superfamily protein )

HSP 1 Score: 179.5 bits (454), Expect = 2.0e-45
Identity = 93/158 (58.86%), Postives = 117/158 (74.05%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGLVRSILHVVGIHL----SSPTSSADSMENA 60
           MGLSSLP PSEG+L VILVNTALSISI KG+VRS L +VGI L    SSP+S   S EN+
Sbjct: 1   MGLSSLPGPSEGMLCVILVNTALSISIVKGIVRSFLGIVGISLSPSSSSPSSVTVSSENS 60

Query: 61  --PESVEFRLNPNGSYIEEFRSRIPAILYDKVHSC-KWLEQDCSVCLTQFEPESEINHLS 120
              ES +FR+    SY+EEFR+R P + ++ +  C K  + +CSVCL++F+ +SEIN L 
Sbjct: 61  STSESFDFRVCQPESYLEEFRNRTPTLRFESLCRCKKQADNECSVCLSKFQGDSEINKLK 120

Query: 121 CGHLFHRVCLEKWLDYWNLTCPLCRTPL--MPEEETAS 150
           CGHLFH+ CLEKW+DYWN+TCPLCRTPL  +PE+   S
Sbjct: 121 CGHLFHKTCLEKWIDYWNITCPLCRTPLVVVPEDHQLS 158

[Close]

BLAST of MC02g0384 vs. TAIR 10
Match: AT2G04240.2 (RING/U-box superfamily protein )

HSP 1 Score: 179.5 bits (454), Expect = 2.0e-45
Identity = 93/158 (58.86%), Postives = 117/158 (74.05%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGLVRSILHVVGIHL----SSPTSSADSMENA 60
           MGLSSLP PSEG+L VILVNTALSISI KG+VRS L +VGI L    SSP+S   S EN+
Sbjct: 1   MGLSSLPGPSEGMLCVILVNTALSISIVKGIVRSFLGIVGISLSPSSSSPSSVTVSSENS 60

Query: 61  --PESVEFRLNPNGSYIEEFRSRIPAILYDKVHSC-KWLEQDCSVCLTQFEPESEINHLS 120
              ES +FR+    SY+EEFR+R P + ++ +  C K  + +CSVCL++F+ +SEIN L 
Sbjct: 61  STSESFDFRVCQPESYLEEFRNRTPTLRFESLCRCKKQADNECSVCLSKFQGDSEINKLK 120

Query: 121 CGHLFHRVCLEKWLDYWNLTCPLCRTPL--MPEEETAS 150
           CGHLFH+ CLEKW+DYWN+TCPLCRTPL  +PE+   S
Sbjct: 121 CGHLFHKTCLEKWIDYWNITCPLCRTPLVVVPEDHQLS 158

[Close]

BLAST of MC02g0384 vs. TAIR 10
Match: AT1G67856.1 (RING/U-box superfamily protein )

HSP 1 Score: 84.3 bits (207), Expect = 9.0e-17
Identity = 47/142 (33.10%), Postives = 77/142 (54.23%), Query Frame = 0


Query: 1   MGLSSLPAPSEGVLGVILVNTALSISIFKGLVRSILHVVGIHLSSPTSSADSMENAPESV 60
           MG+S  P  SEGV+ ++++NT +S+S+ K +VRS++++V    +   +  D  ++     
Sbjct: 1   MGISHYPTASEGVMPMLVMNTVVSVSLVKNMVRSVVNMVSSETNEARNKEDDQDHEDSKR 60

Query: 61  EFRLNPNGSYIEEFRSRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHL-SCGHLFH 120
             R++     I  F S    +  ++    +    DC VCL  F+ E E++ L SC H FH
Sbjct: 61  RRRIS-----ITHFES----LCENRGSRNEREAMDCCVCLCGFKEEEEVSELVSCKHYFH 120

Query: 121 RVCLEKWLDYWNLTCPLCRTPL 142
             CL+KW    + TCPLCR+ L
Sbjct: 121 SACLDKWFGNNHTTCPLCRSIL 133

[Close]

BLAST of MC02g0384 vs. TAIR 10
Match: AT3G61460.1 (brassinosteroid-responsive RING-H2 )

HSP 1 Score: 79.0 bits (193), Expect = 3.8e-15
Identity = 34/73 (46.58%), Postives = 53/73 (72.60%), Query Frame = 0


Query: 75  RSRIPAILYDKV-HSCKWLEQDCSVCLTQFEPESEINHL-SCGHLFHRVCLEKWLDYWNL 134
           R  +P I ++++ +S + L ++C+VCL +FE E EI  L +C H+FHR CL++W+D+   
Sbjct: 72  REILPVIKFEELTNSGEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRSCLDRWMDHDQK 131

Query: 135 TCPLCRTPLMPEE 146
           TCPLCRTP +P+E
Sbjct: 132 TCPLCRTPFVPDE 144

[Close]

BLAST of MC02g0384 vs. TAIR 10
Match: AT3G43430.1 (RING/U-box superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 3.5e-13
Identity = 47/143 (32.87%), Postives = 71/143 (49.65%), Query Frame = 0


Query: 13  VLGVILVNTALSISIFKGLVRSILHVVGIHLSSPTSSADSMENAPESVEFRLNPNGSYIE 72
           ++  +L  TAL I++ + +   IL     + S  +SS+ S  ++  S+  +       + 
Sbjct: 11  IISHVLYKTALIITVLRWIFAWILR----YRSRSSSSSSSQSSSSPSISSQTIKESLAVS 70

Query: 73  EFR---SRIPAILYDKVHSCKWLEQDCSVCLTQFEPESEINHL-SCGHLFHRVCLEKWLD 132
            FR    R PA + D           C+VCL   E E EI  L +C H+FHR C+++WLD
Sbjct: 71  AFRDAVERSPAAINDM----------CAVCLGDLEDEDEIRELRNCTHVFHRDCIDRWLD 130

Query: 133 YW--------NLTCPLCRTPLMP 144
           Y         + TCPLCRTPL+P
Sbjct: 131 YECCGGDDDNHRTCPLCRTPLLP 139

The following BLAST results are available for this feature:

BLAST of MC02g0384 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SI09	2.9e-44	58.86	Probable E3 ubiquitin-protein ligase XERICO OS=Arabidopsis thaliana OX=3702 GN=X...	[more]
Q9XF92	5.3e-14	46.58	Brassinosteroid-responsive RING protein 1 OS=Arabidopsis thaliana OX=3702 GN=BRH...	[more]
Q9ZU51	7.2e-11	51.02	E3 ubiquitin-protein ligase RHA2B OS=Arabidopsis thaliana OX=3702 GN=RHA2B PE=1 ...	[more]
Q9ZT50	6.1e-10	47.06	E3 ubiquitin-protein ligase RHA2A OS=Arabidopsis thaliana OX=3702 GN=RHA2A PE=1 ...	[more]
Q9SUS5	3.0e-09	26.28	E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis thaliana OX=3702 GN=RHA1B PE=2 ...	[more]

BLAST of MC02g0384 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140382.1	2.05e-109	100.00	probable E3 ubiquitin-protein ligase XERICO [Momordica charantia] >XP_022140383....	[more]
XP_004139989.1	1.60e-100	92.90	probable E3 ubiquitin-protein ligase XERICO [Cucumis sativus] >XP_031742532.1 pr...	[more]
XP_008448128.1	2.75e-99	90.38	PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Cucumis melo] >KAA006084...	[more]
XP_022947327.1	4.67e-99	90.13	probable E3 ubiquitin-protein ligase XERICO [Cucurbita moschata] >XP_022947328.1...	[more]
XP_022971123.1	6.63e-99	90.13	probable E3 ubiquitin-protein ligase XERICO [Cucurbita maxima] >XP_022971124.1 p...	[more]

BLAST of MC02g0384 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CGP1	9.94e-110	100.00	probable E3 ubiquitin-protein ligase XERICO OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A0A0KAU4	7.74e-101	92.90	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G113550 P...	[more]
A0A5D3DTM0	1.33e-99	90.38	Putative E3 ubiquitin-protein ligase XERICO OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BIY9	1.33e-99	90.38	probable E3 ubiquitin-protein ligase XERICO OS=Cucumis melo OX=3656 GN=LOC103490...	[more]
A0A6J1G653	2.26e-99	90.13	probable E3 ubiquitin-protein ligase XERICO OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of MC02g0384 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G04240.1	2.0e-45	58.86	RING/U-box superfamily protein	[more]
AT2G04240.2	2.0e-45	58.86	RING/U-box superfamily protein	[more]
AT1G67856.1	9.0e-17	33.10	RING/U-box superfamily protein	[more]
AT3G61460.1	3.8e-15	46.58	brassinosteroid-responsive RING-H2	[more]
AT3G43430.1	3.5e-13	32.87	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 96..137 e-value: 5.0E-6 score: 36.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 95..138 e-value: 4.7E-11 score: 42.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 96..138 score: 12.784338
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 63..143 e-value: 4.9E-17 score: 63.4
IPR044249	Probable E3 ubiquitin-protein ligase XERICO-like	PANTHER	PTHR47258	FAMILY NOT NAMED	coord: 1..152
None	No IPR available	PANTHER	PTHR47258:SF1	E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATED	coord: 1..152
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 84..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g0384.1	MC02g0384.1	mRNA