MC02g0290 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC02g0290
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionProtein of unknown function, DUF584
LocationMC02: 2654442 .. 2654726 (-)
RNA-Seq ExpressionMC02g0290
SyntenyMC02g0290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGGATTGGGGAGGCGCGCGCGGTGGTGGTGCTTCGTCGTTGCCGGTGAATATTCCGGATTGGTCGAAGATTCTGAAGGAGGAGTACAGAGAGAAAAGTAGGTGGGAATACGATGAGGATTCGGAGGGAGATGGGGATAGTGAGGATGGAATGAGAGTGCCGCCGCACGAGTTTTTGGCGAGGACGAGGATGGCATCTTTTTCGGTGCACGAAGGAATCGGGAGGACGTTGAAAGGGAGAGATCTGAGTAGGGTGAGAAATGCAATATGGGAAAAAACTGGGTTC

mRNA sequence

GGGGATTGGGGAGGCGCGCGCGGTGGTGGTGCTTCGTCGTTGCCGGTGAATATTCCGGATTGGTCGAAGATTCTGAAGGAGGAGTACAGAGAGAAAAGTAGGTGGGAATACGATGAGGATTCGGAGGGAGATGGGGATAGTGAGGATGGAATGAGAGTGCCGCCGCACGAGTTTTTGGCGAGGACGAGGATGGCATCTTTTTCGGTGCACGAAGGAATCGGGAGGACGTTGAAAGGGAGAGATCTGAGTAGGGTGAGAAATGCAATATGGGAAAAAACTGGGTTC

Coding sequence (CDS)

GGGGATTGGGGAGGCGCGCGCGGTGGTGGTGCTTCGTCGTTGCCGGTGAATATTCCGGATTGGTCGAAGATTCTGAAGGAGGAGTACAGAGAGAAAAGTAGGTGGGAATACGATGAGGATTCGGAGGGAGATGGGGATAGTGAGGATGGAATGAGAGTGCCGCCGCACGAGTTTTTGGCGAGGACGAGGATGGCATCTTTTTCGGTGCACGAAGGAATCGGGAGGACGTTGAAAGGGAGAGATCTGAGTAGGGTGAGAAATGCAATATGGGAAAAAACTGGGTTC

Protein sequence

GDWGGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSEDGMRVPPHEFLARTRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF
Homology
BLAST of MC02g0290 vs. NCBI nr
Match: XP_022140623.1 (uncharacterized protein LOC111011233 [Momordica charantia])

HSP 1 Score: 199 bits (507), Expect = 1.50e-63
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0

Query: 1   GDWGGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSEDGMRVPPHEFLA 60
           GDWGGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSEDGMRVPPHEFLA
Sbjct: 72  GDWGGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSEDGMRVPPHEFLA 131

Query: 61  RTRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF 95
           RTRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF
Sbjct: 132 RTRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF 166

BLAST of MC02g0290 vs. NCBI nr
Match: XP_004145741.1 (uncharacterized protein LOC101215539 [Cucumis sativus] >KGN46838.1 hypothetical protein Csa_021100 [Cucumis sativus])

HSP 1 Score: 150 bits (380), Expect = 2.90e-44
Identity = 77/96 (80.21%), Postives = 81/96 (84.38%), Query Frame = 0

Query: 4   GGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSEDGMRVPPHEFLAR-- 63
           GG  GGGASSLPVNIPDWSKILKEEYREK   EY +D E D + E+ MRVPPHEFLAR  
Sbjct: 68  GGGGGGGASSLPVNIPDWSKILKEEYREKRSLEYADDMEEDEEEEEEMRVPPHEFLARQM 127

Query: 64  --TRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF 95
             TR+ASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF
Sbjct: 128 ARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF 163

BLAST of MC02g0290 vs. NCBI nr
Match: XP_008463944.1 (PREDICTED: uncharacterized protein LOC103501949 [Cucumis melo] >KAA0035343.1 uncharacterized protein E6C27_scaffold228G001470 [Cucumis melo var. makuwa] >TYK14294.1 uncharacterized protein E5676_scaffold84G00170 [Cucumis melo var. makuwa])

HSP 1 Score: 149 bits (376), Expect = 1.07e-43
Identity = 76/92 (82.61%), Postives = 79/92 (85.87%), Query Frame = 0

Query: 8   GGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSEDGMRVPPHEFLAR----TR 67
           GGGASSLPVNIPDWSKILKEEYREK   EY +D E D D E+ MRVPPHEFLAR    TR
Sbjct: 69  GGGASSLPVNIPDWSKILKEEYREKRSSEYADDMEDDEDEEEEMRVPPHEFLARQMARTR 128

Query: 68  MASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF 95
           +ASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF
Sbjct: 129 IASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF 160

BLAST of MC02g0290 vs. NCBI nr
Match: XP_038901889.1 (uncharacterized protein LOC120088567 [Benincasa hispida])

HSP 1 Score: 147 bits (371), Expect = 6.77e-43
Identity = 76/94 (80.85%), Postives = 81/94 (86.17%), Query Frame = 0

Query: 6   ARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSEDGMRVPPHEFLAR---- 65
           A GGGASS PVNIPDWSKILKEEYREK R EY++D E D D ++ MRVPPHEFLAR    
Sbjct: 71  AGGGGASSFPVNIPDWSKILKEEYREK-RMEYEDDLEEDEDEDEEMRVPPHEFLARQMAR 130

Query: 66  TRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF 95
           TR+ASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF
Sbjct: 131 TRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF 163

BLAST of MC02g0290 vs. NCBI nr
Match: XP_023513244.1 (uncharacterized protein LOC111777757 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 147 bits (370), Expect = 9.05e-43
Identity = 72/91 (79.12%), Postives = 78/91 (85.71%), Query Frame = 0

Query: 5   GARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSEDGMRVPPHEFLARTRM 64
           G  GGGASSLPVNIPDWSKILKEEYRE+   EY+ D E + D ++ MRVPPHEFLAR+R 
Sbjct: 71  GGGGGGASSLPVNIPDWSKILKEEYREERSSEYEGDLEEESDGDEEMRVPPHEFLARSRT 130

Query: 65  ASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF 95
           ASFSV EGIGRTLKGRDLSRVRNAIWEKTGF
Sbjct: 131 ASFSVQEGIGRTLKGRDLSRVRNAIWEKTGF 161

BLAST of MC02g0290 vs. ExPASy TrEMBL
Match: A0A6J1CIE6 (uncharacterized protein LOC111011233 OS=Momordica charantia OX=3673 GN=LOC111011233 PE=4 SV=1)

HSP 1 Score: 199 bits (507), Expect = 7.25e-64
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0

Query: 1   GDWGGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSEDGMRVPPHEFLA 60
           GDWGGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSEDGMRVPPHEFLA
Sbjct: 72  GDWGGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSEDGMRVPPHEFLA 131

Query: 61  RTRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF 95
           RTRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF
Sbjct: 132 RTRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF 166

BLAST of MC02g0290 vs. ExPASy TrEMBL
Match: A0A0A0KBD5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G141350 PE=4 SV=1)

HSP 1 Score: 150 bits (380), Expect = 1.41e-44
Identity = 77/96 (80.21%), Postives = 81/96 (84.38%), Query Frame = 0

Query: 4   GGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSEDGMRVPPHEFLAR-- 63
           GG  GGGASSLPVNIPDWSKILKEEYREK   EY +D E D + E+ MRVPPHEFLAR  
Sbjct: 68  GGGGGGGASSLPVNIPDWSKILKEEYREKRSLEYADDMEEDEEEEEEMRVPPHEFLARQM 127

Query: 64  --TRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF 95
             TR+ASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF
Sbjct: 128 ARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF 163

BLAST of MC02g0290 vs. ExPASy TrEMBL
Match: A0A5A7SXR0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00170 PE=4 SV=1)

HSP 1 Score: 149 bits (376), Expect = 5.20e-44
Identity = 76/92 (82.61%), Postives = 79/92 (85.87%), Query Frame = 0

Query: 8   GGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSEDGMRVPPHEFLAR----TR 67
           GGGASSLPVNIPDWSKILKEEYREK   EY +D E D D E+ MRVPPHEFLAR    TR
Sbjct: 69  GGGASSLPVNIPDWSKILKEEYREKRSSEYADDMEDDEDEEEEMRVPPHEFLARQMARTR 128

Query: 68  MASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF 95
           +ASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF
Sbjct: 129 IASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF 160

BLAST of MC02g0290 vs. ExPASy TrEMBL
Match: A0A1S3CKD1 (uncharacterized protein LOC103501949 OS=Cucumis melo OX=3656 GN=LOC103501949 PE=4 SV=1)

HSP 1 Score: 149 bits (376), Expect = 5.20e-44
Identity = 76/92 (82.61%), Postives = 79/92 (85.87%), Query Frame = 0

Query: 8   GGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSEDGMRVPPHEFLAR----TR 67
           GGGASSLPVNIPDWSKILKEEYREK   EY +D E D D E+ MRVPPHEFLAR    TR
Sbjct: 69  GGGASSLPVNIPDWSKILKEEYREKRSSEYADDMEDDEDEEEEMRVPPHEFLARQMARTR 128

Query: 68  MASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF 95
           +ASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF
Sbjct: 129 IASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF 160

BLAST of MC02g0290 vs. ExPASy TrEMBL
Match: A0A6J1J9C1 (uncharacterized protein LOC111483768 OS=Cucurbita maxima OX=3661 GN=LOC111483768 PE=4 SV=1)

HSP 1 Score: 145 bits (367), Expect = 1.21e-42
Identity = 71/88 (80.68%), Postives = 77/88 (87.50%), Query Frame = 0

Query: 8   GGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSEDGMRVPPHEFLARTRMASF 67
           GGGASSLPVNIPDWSKILKEEYRE+   EY+ D E + D ++ MRVPPHEFLAR+R ASF
Sbjct: 73  GGGASSLPVNIPDWSKILKEEYREERSLEYEGDLEEESDGDEEMRVPPHEFLARSRTASF 132

Query: 68  SVHEGIGRTLKGRDLSRVRNAIWEKTGF 95
           SV EGIGRTLKGRDLSRVRNAIWEKTGF
Sbjct: 133 SVQEGIGRTLKGRDLSRVRNAIWEKTGF 160

BLAST of MC02g0290 vs. TAIR 10
Match: AT5G60680.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 126.7 bits (317), Expect = 9.8e-30
Identity = 61/86 (70.93%), Postives = 73/86 (84.88%), Query Frame = 0

Query: 11  ASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSEDGMR-VPPHEFLARTRMASFSV 70
           ASSLPVN+PDWSKIL+ EYR+  R   +++ + D D+EDG   +PPHEFLA+TRMASFSV
Sbjct: 76  ASSLPVNVPDWSKILRGEYRDNRRRSIEDNDDDDDDNEDGGDWLPPHEFLAKTRMASFSV 135

Query: 71  HEGIGRTLKGRDLSRVRNAIWEKTGF 96
           HEG+GRTLKGRDLSRVRNAI+EK GF
Sbjct: 136 HEGVGRTLKGRDLSRVRNAIFEKFGF 161

BLAST of MC02g0290 vs. TAIR 10
Match: AT5G03230.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 113.2 bits (282), Expect = 1.1e-25
Identity = 61/99 (61.62%), Postives = 69/99 (69.70%), Query Frame = 0

Query: 1   GDWGGARGGGASSLPVNIPDWSKILKEEYREKS--RWEYDEDSEGDGDSEDGMR--VPPH 60
           GD G        SLPVNIPDWSKILK EYR  +    + D+D E D DS DG R  +PPH
Sbjct: 66  GDSGNREITKTGSLPVNIPDWSKILKSEYRGHAIPDDDSDDDDEDDDDSNDGGRRMIPPH 125

Query: 61  EFLARTRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTGF 96
           E+LAR R +SF+VHEGIG T KGRDL R+RNAIWEK GF
Sbjct: 126 EYLARRRGSSFTVHEGIGGTAKGRDLRRLRNAIWEKIGF 164

BLAST of MC02g0290 vs. TAIR 10
Match: AT3G45210.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 106.7 bits (265), Expect = 1.1e-23
Identity = 55/85 (64.71%), Postives = 66/85 (77.65%), Query Frame = 0

Query: 11  ASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDGDSEDGMRVPPHEFLARTRMASFSVH 70
           ASSLP+N+ +WSKIL +E R        +  E D D  +G ++PPHE+LA+TRMASFSVH
Sbjct: 71  ASSLPMNVQNWSKILGKENR--------KSIENDDDGGEG-KLPPHEYLAKTRMASFSVH 130

Query: 71  EGIGRTLKGRDLSRVRNAIWEKTGF 96
           EGIGRTLKGRD+SRVRNAI EKTGF
Sbjct: 131 EGIGRTLKGRDMSRVRNAILEKTGF 146

BLAST of MC02g0290 vs. TAIR 10
Match: AT2G28400.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 104.8 bits (260), Expect = 4.0e-23
Identity = 56/93 (60.22%), Postives = 65/93 (69.89%), Query Frame = 0

Query: 4   GGARGGGASSLPVNIPDWSKILKEEYREKSRWEYDEDSEGDG--DSEDGMRVPPHEFLAR 63
           G   G  ASSLPVN+PDWSKIL +E R + +   +E+ +GD     E   RVPPHE LA 
Sbjct: 67  GSDSGKAASSLPVNVPDWSKILGDESRRQRKISNEEEVDGDEILCGEGTRRVPPHELLAN 126

Query: 64  TRMASFSVHEGIGRTLKGRDLSRVRNAIWEKTG 95
            RMASFSVHEG GRTLKGRDLSRVRN I++  G
Sbjct: 127 RRMASFSVHEGAGRTLKGRDLSRVRNTIFKIRG 159

BLAST of MC02g0290 vs. TAIR 10
Match: AT4G04630.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 91.7 bits (226), Expect = 3.5e-19
Identity = 45/89 (50.56%), Postives = 64/89 (71.91%), Query Frame = 0

Query: 12  SSLPVNIPDWSKILKE-EYREKSRWEYDEDSEGDGDSEDGMRVPPHEF----LARTRMAS 71
           SS P+N+PDWSK+  + +   +S   +   ++ D + +DG  VPPHE+    LART+++S
Sbjct: 78  SSAPMNVPDWSKVYGDSKSNRRSSHLHSHAADDDDEDDDGCMVPPHEWVARKLARTQISS 137

Query: 72  FSVHEGIGRTLKGRDLSRVRNAIWEKTGF 96
           FS+ EG+GRTLKGRDLS+VRNA+  KTGF
Sbjct: 138 FSMCEGVGRTLKGRDLSKVRNAVLSKTGF 166

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022140623.11.50e-63100.00uncharacterized protein LOC111011233 [Momordica charantia][more]
XP_004145741.12.90e-4480.21uncharacterized protein LOC101215539 [Cucumis sativus] >KGN46838.1 hypothetical ... [more]
XP_008463944.11.07e-4382.61PREDICTED: uncharacterized protein LOC103501949 [Cucumis melo] >KAA0035343.1 unc... [more]
XP_038901889.16.77e-4380.85uncharacterized protein LOC120088567 [Benincasa hispida][more]
XP_023513244.19.05e-4379.12uncharacterized protein LOC111777757 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
A0A6J1CIE67.25e-64100.00uncharacterized protein LOC111011233 OS=Momordica charantia OX=3673 GN=LOC111011... [more]
A0A0A0KBD51.41e-4480.21Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G141350 PE=4 SV=1[more]
A0A5A7SXR05.20e-4482.61Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CKD15.20e-4482.61uncharacterized protein LOC103501949 OS=Cucumis melo OX=3656 GN=LOC103501949 PE=... [more]
A0A6J1J9C11.21e-4280.68uncharacterized protein LOC111483768 OS=Cucurbita maxima OX=3661 GN=LOC111483768... [more]
Match NameE-valueIdentityDescription
AT5G60680.19.8e-3070.93Protein of unknown function, DUF584 [more]
AT5G03230.11.1e-2561.62Protein of unknown function, DUF584 [more]
AT3G45210.11.1e-2364.71Protein of unknown function, DUF584 [more]
AT2G28400.14.0e-2360.22Protein of unknown function, DUF584 [more]
AT4G04630.13.5e-1950.56Protein of unknown function, DUF584 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007608Senescence regulator S40PFAMPF04520Senescence_regcoord: 10..95
e-value: 1.0E-36
score: 127.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..53
NoneNo IPR availablePANTHERPTHR46525:SF2EMB|CAB72159.1coord: 7..95
NoneNo IPR availablePANTHERPTHR46525EMB|CAB72159.1coord: 7..95

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC02g0290.1MC02g0290.1mRNA