MC02g0270 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g0270
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	SNF1-related protein kinase regulatory subunit beta-3
Location	MC02: 2453356 .. 2457072 (-)
RNA-Seq Expression	MC02g0270
Synteny	MC02g0270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTATTTATTTTCGTCCTCCAATAAGCAATAACCACTTCGAGCAGATTCCCTTTCGCGGATTCGTTTGAGGAGGCAGTCTCTGTGTTGGTCCCGCTTGCTTTTGAAGCGTCTCTTTTATTGCCTTTCATTCTTCCAACTTCCAAAGTTCCCTTTCTTCCATTACCTCTGGTTTCCGTGTAAGTATCTTTTAAGTTTTTGCTGCTATTTCGCCCCCAAACCCTCAACTCTTCTACTGGGGTTTTCTATTCCAACTTCAATTCGCTGCCAATAAGTTTCTTTTGCTTCTTACAATTCAGCTTTCTCCAAAATTTTCAGAGTTTTCATTGCTCAATGTCCTTATTTGACTGAATCATTTGATGGGTTGCTTATAATTTCTTCCAGATTAAGTTTGGGTCTCCGGTAATTCGATTATTGTTCCATTTTCGTCTGTGGGTTTCGGTCTGGAGCCTGTTGATCGATAATTGAAGGGTCAAAATCTCCAATCATCCAGGTTAATCTCCTCTTGACCTACAATATTTCATTTTCTTATGGATTACAGAATGCTGTAGCGCCTATAAAGTCCAATTTTGTGGCTTATAATTTTCGTTTCTGGACTCTTATGACATGGTTTTCTTCTCTTTTGGGGTTAAGAAAGACTGCAGCTCCGCCTAGAGATGCTCCATTTGATATTATGTATATTGTTAATATTTACCCTTATGATGTGTGTTTCTTTCCCCTATAATGAATGATCCATGGTGTGTCCAATCTGTTTCCTTCCTGGTTTGAGCATATAGTTTCATATATAATTATAGGTTGCCAGTTGCCAGGTTGCTTTCTAAAGGGTCTCAATCTGTTTCTTTTTTATTTTCTTGGCAATCTGCACTCTGTGCATGTTGAATTGAAGCTGGACACAGCCAAATAAGATTCGGATTCTTAACAACTGCAGCATTGAGTTTTGAGGGAGTTGAATATTAATGAGAAGAAAGGATTCTGATTTGTGGGAGTTAACTAACAAAATCTTACATAATGATCTTGATACTATCAGAAACAGAAGTGCTACGTATTGAAGTTAATTCTTGTTTCCAACAAGTTGTGTATAATCATTCAAATTGGGGTGGCATCTTCAAATTCATATCTAATGGGTCAGGTAAGAATTTGAGAGAATTTATCACACCCGTCATGATAAATGCAATGCGAGTCTACCTCAATGTTTGGTTTTCCCTTGCTTGGGTCTGTACAATGAAATGGTTTTATAAGCTATACTATTTCCAAGTCAAATTGAGTAATGGCCGATGAAAGATCTTAACAACGCATTCTTGAAAATGGAAAGCCTTTACGTTATTGCATTTTCTGTCAATTTGAGTAAGCCTTTATCAACGTTTTCCTTCAGTTTGTTTTATCTTTTGTTGCTCCTTCACTGTATACTTCTCATAGTCTTTTGATTTATTCAATGTCTTCTATCATTAAATTGTTAGGTGTGGTTTTAATGTCTGCCTAGCAAACAGTATTGTTATAGATGTTATGGATGAAGTACTAGACAACTTGGTTCTCCAAGGTTTATGTTGTTTGTATGGTAGTTCTATGCCTAACTATAGTACACATTAGAATCTAAGGACACAACTTACAAGTTAGGTCGTTAATCCTAACTATAGCATATCGACACAATACTTCATGGAGTAGTTGTTTGTTAGAAACCTTTACCTTATAATTTTTGGCCCATGTCATTAGTAGCCCAAACTAGGTATTTTAACCTAGTCAAGACCTGAAGAGCTCCCCCCTATCTAAGAATGGAGGGTGAAATTACACCTCCAGTATAGAGTTTGAAGACTTACTACAAGCGATCGATACTCCAAAAGACGATCCCAAATGGAACCTGCAAACTAACCTCTTCCCAGAACATGCTCCATATTTTCTGGGGCACTCTTTGAATAAAGTCAATAGTGTTAATCCACCTTAGCCTTTCTAGACAAAAAGTTGTGACCTTCTCACCTTCCAAAGCGAGGAGAACAAAGAGAGCAAGTTGGGTGAGGAAGGAATAATTATAATTAATAAGGATCTAAGAAGGAGAATAATTATGAAACACTCTAGAAGTAGAAAAGAGCTCCAAAGGAAGGCATCAATTAACTCTGTCCCATAATTCCCAAATATCCCTAGAAATATCTCGAAAGCCTCATTTTCAATTGAGCTTGAAACTAGAGAATATGGTTCGACTCTTCAACATTTGCTAGTTGGAAAACTCGTGGAATATTTAAGGGTTTTTGCCACAACATTTGTATTCTTGGAACTTAAGTTTCTGTATTTGATTGACGGATCTAATGAACTTGCAAAATAAATAATAATGGGATTGCTCATAAATAGTTCCCTTAGGTCTCTTAATAAGTTCTTGTGATTCTGGTTAGCATCCAAAAGGTTCCATAAACAGGGTGAATTAGTGTAAAGCCATGCTACATGAATTCATATCTGAATGCAACTTGTCTTGATATCTGACTAGAGCTTATCTTCTTTAGGCTTCCGATTAGTTACATTAGGAGGACGAAATGCCTTATCGGTTATCAAGTTTATATCTGTCAACTGTATCCCTGTTTGATTTGAAGACAGTTAGACCAAACCCAAAGGTTGTATTTAGTGGAAATGGAGTTTTGTGTTAATACTCACCAAAGAAAACCTTTGTGCTTTCCAGGTTTCCAGTTCTATAAGTTTCTGCAATTGATGAGTCTTTGCTGTTAAATTGGAAGTTCACTTCAACATGAACAACCCATACTCTGAAGATAGTGTAAGCTGCTAAACCTAGGTGTTTCCATGAACTAATAACGTGAAATGGGCTTTAAGGATGTATCCTTTCTACAGGATCAAACCACTGTAGTCGGTTTTGAAGTTCCAAATTCACCGGATTCAACCTACAACAATCTGTACCTTGGGAGCGAAGACGAGGCACGTGATCCACCGTTTGCCCCGCCTCATTTGCAGCACACCTTACTGAGCCACCCAGCGAGCAGAGATGCTGGTGGAACTCTTCCATTGCCACACAATGTGATCCTCAACCATCTTTACATCGAAAACCGGGAGACTCCACGTTCTGTTGTGGCTCTCGGATTCACACATCGTTTTCGTTCAAAATTTGTCACGGTTGTGCTTTACAAACCGGTTCACAGAAGAGGAAGTAGCAGGGCTTAGTTATTCATATACATGGGAAAGTTTGATTAGAATTGGTCCGACGGACATGACTAGAAAACGTTTATGACATGTGAGATGTCGATGAAATTAGGGTCGATGAAGTGCATTTAACTTCACCAAGTAAATGAATGTTAACGACGTAGATATTGTATTGTACCTGTAATTTTTTTGAACTGTCTAGTGGCAGTAATTGAATACATTCAAGCATATGCATCTTCTAGCTGTTAAAGATGCAAAATTGAACTTTGAGTTGGCCTTTTTTCTTTTTAAAGTAGGAGTGTAATGCCCCCATTATTATTTAGGCGAACCACCCACCGCCACTGGGCGTTTGATTAGACGTGTAAGTTATTGTAAAACAATTAAGACAAAGTTTGAAGATTTTGAGTTTATATGGTGGAAAGATGGGGAACTAATGGATCGTTGATTGGACAAGTTGCTAAAGGTTGTCCAAAATATCAGCACTTTTGCAGCTGCCTATGTCATGATGAGAAGAGGGAGATTCTATATACCTTCCATTTTCATTTTTCCAATAACAAGGACAGATATAGCTTTTATTATTAT

mRNA sequence

GTTTTATTTATTTTCGTCCTCCAATAAGCAATAACCACTTCGAGCAGATTCCCTTTCGCGGATTCGTTTGAGGAGGCAGTCTCTGTGTTGGTCCCGCTTGCTTTTGAAGCGTCTCTTTTATTGCCTTTCATTCTTCCAACTTCCAAAGTTCCCTTTCTTCCATTACCTCTGGTTTCCGTATTAAGTTTGGGTCTCCGGTAATTCGATTATTGTTCCATTTTCGTCTGTGGGTTTCGGTCTGGAGCCTGTTGATCGATAATTGAAGGGTCAAAATCTCCAATCATCCAGGTTTCCAGTTCTATAAGTTTCTGCAATTGATGAGTCTTTGCTGTTAAATTGGAAGTTCACTTCAACATGAACAACCCATACTCTGAAGATAGTGATCAAACCACTGTAGTCGGTTTTGAAGTTCCAAATTCACCGGATTCAACCTACAACAATCTGTACCTTGGGAGCGAAGACGAGGCACGTGATCCACCGTTTGCCCCGCCTCATTTGCAGCACACCTTACTGAGCCACCCAGCGAGCAGAGATGCTGGTGGAACTCTTCCATTGCCACACAATGTGATCCTCAACCATCTTTACATCGAAAACCGGGAGACTCCACGTTCTGTTGTGGCTCTCGGATTCACACATCGTTTTCGTTCAAAATTTGTCACGGTTGTGCTTTACAAACCGGTTCACAGAAGAGGAAGTAGCAGGGCTTAGTTATTCATATACATGGGAAAGTTTGATTAGAATTGGTCCGACGGACATGACTAGAAAACGTTTATGACATGTGAGATGTCGATGAAATTAGGGTCGATGAAGTGCATTTAACTTCACCAAGTAAATGAATGTTAACGACGTAGATATTGTATTGTACCTGTAATTTTTTTGAACTGTCTAGTGGCAGTAATTGAATACATTCAAGCATATGCATCTTCTAGCTGTTAAAGATGCAAAATTGAACTTTGAGTTGGCCTTTTTTCTTTTTAAAGTAGGAGTGTAATGCCCCCATTATTATTTAGGCGAACCACCCACCGCCACTGGGCGTTTGATTAGACGTGTAAGTTATTGTAAAACAATTAAGACAAAGTTTGAAGATTTTGAGTTTATATGGTGGAAAGATGGGGAACTAATGGATCGTTGATTGGACAAGTTGCTAAAGGTTGTCCAAAATATCAGCACTTTTGCAGCTGCCTATGTCATGATGAGAAGAGGGAGATTCTATATACCTTCCATTTTCATTTTTCCAATAACAAGGACAGATATAGCTTTTATTATTAT

Coding sequence (CDS)

ATGAACAACCCATACTCTGAAGATAGTGATCAAACCACTGTAGTCGGTTTTGAAGTTCCAAATTCACCGGATTCAACCTACAACAATCTGTACCTTGGGAGCGAAGACGAGGCACGTGATCCACCGTTTGCCCCGCCTCATTTGCAGCACACCTTACTGAGCCACCCAGCGAGCAGAGATGCTGGTGGAACTCTTCCATTGCCACACAATGTGATCCTCAACCATCTTTACATCGAAAACCGGGAGACTCCACGTTCTGTTGTGGCTCTCGGATTCACACATCGTTTTCGTTCAAAATTTGTCACGGTTGTGCTTTACAAACCGGTTCACAGAAGAGGAAGTAGCAGGGCTTAG

Protein sequence

MNNPYSEDSDQTTVVGFEVPNSPDSTYNNLYLGSEDEARDPPFAPPHLQHTLLSHPASRDAGGTLPLPHNVILNHLYIENRETPRSVVALGFTHRFRSKFVTVVLYKPVHRRGSSRA

Homology

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BLAST of MC02g0270 vs. ExPASy Swiss-Prot
Match: Q9ZUU8 (SNF1-related protein kinase regulatory subunit beta-3 OS=Arabidopsis thaliana OX=3702 GN=KINB3 PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.2e-36
Identity = 74/115 (64.35%), Postives = 89/115 (77.39%), Query Frame = 0


Query: 1   MNNPYSEDSDQTTVVGFEVPNSPDSTYNNLYLGSEDEARDPPFAPPHLQHTLLSHPASRD 60
           MN+   +D + TTVVGFEVP SP S+YNN+Y  +EDE RDPP  PPHLQH+LL +  S +
Sbjct: 1   MNSQNPDDHEDTTVVGFEVPVSPVSSYNNVYSSTEDETRDPPAVPPHLQHSLLGNQGSME 60

Query: 61  AGGTLPLPHNVILNHLYIENRETPRSVVALGFTHRFRSKFVTVVLYKPVHRRGSS 116
                  P NV+LNHLYIENR+ PRSVVALGF+HRFR+KFVTVV+YKPV RRGS+
Sbjct: 61  LAYA---PQNVVLNHLYIENRDAPRSVVALGFSHRFRTKFVTVVIYKPVQRRGSA 112

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BLAST of MC02g0270 vs. ExPASy Swiss-Prot
Match: Q9SCY5 (SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX=3702 GN=KINB2 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.5e-24
Identity = 56/103 (54.37%), Postives = 76/103 (73.79%), Query Frame = 0


Query: 10  DQTTVVGFEVPNSPDSTYNNLYLGSEDEARDPPFAPPHLQHTLLSHPASR-DAGGTLPLP 69
           D  ++ GFE P SP+++Y+NL LG+ED +++PP  PPHLQ TLL+ PA+  D    LP P
Sbjct: 187 DIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRP 246

Query: 70  HNVILNHLYIENRETPRSVVALGFTHRFRSKFVTVVLYKPVHR 112
            +VILNHLY++  ++  SVVALG THRF +K+VTVVLYK + R
Sbjct: 247 QHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYKSLQR 289

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BLAST of MC02g0270 vs. ExPASy Swiss-Prot
Match: Q84VQ1 (SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX=3702 GN=KINB1 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.6e-18
Identity = 46/99 (46.46%), Postives = 63/99 (63.64%), Query Frame = 0


Query: 13  TVVGFEVPNSPDSTYNNLYLGSEDEARDPPFAPPHLQHTLLSHPASRDAGGTLPLPHNVI 72
           ++V FE P SPD +Y      +ED A++P   PP L  TLL    + +       P +V+
Sbjct: 188 SIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQLHLTLL---GTTEETAIATKPQHVV 247

Query: 73  LNHLYIENRETPRSVVALGFTHRFRSKFVTVVLYKPVHR 112
           LNH++IE   TP+S+VALG THRF SK++TVVLYKP+ R
Sbjct: 248 LNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYKPLTR 283

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BLAST of MC02g0270 vs. ExPASy Swiss-Prot
Match: Q9QZH4 (5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.4e-09
Identity = 36/95 (37.89%), Postives = 55/95 (57.89%), Query Frame = 0


Query: 18  EVPNSPDSTY-NNLYL-GSEDEARDPPFAPPHLQHTLLSHPASRDAG-GTLPLPHNVILN 77
           ++ +SP   Y   +Y+  SE+  + PP  PPHL   +L+   +       LP P++V+LN
Sbjct: 179 DLSSSPPGPYGQEMYVFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLN 238

Query: 78  HLYIENRETPRSVVALGFTHRFRSKFVTVVLYKPV 110
           HLY     T  SV+ L  THR++ K+VT +LYKP+
Sbjct: 239 HLYA--LSTKDSVMVLSATHRYKKKYVTTLLYKPI 271

[Close]

BLAST of MC02g0270 vs. ExPASy Swiss-Prot
Match: Q6PAM0 (5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.2e-09
Identity = 35/95 (36.84%), Postives = 56/95 (58.95%), Query Frame = 0


Query: 18  EVPNSPDSTY-NNLYL-GSEDEARDPPFAPPHLQHTLLSHPASRDAG-GTLPLPHNVILN 77
           ++ +SP   Y   +Y+  SE+  + PP  PPHL   +L+   +       LP P++V+LN
Sbjct: 179 DLSSSPPGPYGQEMYVFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLN 238

Query: 78  HLYIENRETPRSVVALGFTHRFRSKFVTVVLYKPV 110
           HLY  + +   SV+ L  THR++ K+VT +LYKP+
Sbjct: 239 HLYALSIKD--SVMVLSATHRYKKKYVTTLLYKPI 271

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BLAST of MC02g0270 vs. NCBI nr
Match: XP_022140750.1 (SNF1-related protein kinase regulatory subunit beta-3 [Momordica charantia] >XP_022140751.1 SNF1-related protein kinase regulatory subunit beta-3 [Momordica charantia])

HSP 1 Score: 244 bits (623), Expect = 1.43e-81
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MNNPYSEDSDQTTVVGFEVPNSPDSTYNNLYLGSEDEARDPPFAPPHLQHTLLSHPASRD 60
           MNNPYSEDSDQTTVVGFEVPNSPDSTYNNLYLGSEDEARDPPFAPPHLQHTLLSHPASRD
Sbjct: 1   MNNPYSEDSDQTTVVGFEVPNSPDSTYNNLYLGSEDEARDPPFAPPHLQHTLLSHPASRD 60

Query: 61  AGGTLPLPHNVILNHLYIENRETPRSVVALGFTHRFRSKFVTVVLYKPVHRRGSSRA 117
           AGGTLPLPHNVILNHLYIENRETPRSVVALGFTHRFRSKFVTVVLYKPVHRRGSSRA
Sbjct: 61  AGGTLPLPHNVILNHLYIENRETPRSVVALGFTHRFRSKFVTVVLYKPVHRRGSSRA 117

[Close]

BLAST of MC02g0270 vs. NCBI nr
Match: XP_022958406.1 (SNF1-related protein kinase regulatory subunit beta-3-like [Cucurbita moschata] >XP_022958407.1 SNF1-related protein kinase regulatory subunit beta-3-like [Cucurbita moschata] >XP_022958408.1 SNF1-related protein kinase regulatory subunit beta-3-like [Cucurbita moschata] >KAG6606042.1 SNF1-related protein kinase regulatory subunit beta-3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035994.1 SNF1-related protein kinase regulatory subunit beta-3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 219 bits (558), Expect = 1.18e-71
Identity = 103/115 (89.57%), Postives = 109/115 (94.78%), Query Frame = 0


Query: 1   MNNPYSEDSDQTTVVGFEVPNSPDSTYNNLYLGSEDEARDPPFAPPHLQHTLLSHPASRD 60
           MNNP+ EDSDQTTVVGFEVP SPDSTYNN+YLGSED+ARDPP  PPHLQHTLLSHPASRD
Sbjct: 1   MNNPFPEDSDQTTVVGFEVPKSPDSTYNNVYLGSEDDARDPPPVPPHLQHTLLSHPASRD 60

Query: 61  AGGTLPLPHNVILNHLYIENRETPRSVVALGFTHRFRSKFVTVVLYKPVHRRGSS 115
           AGGTLPLP NV+LNHL+IENRETPRSVVALGFTHRF SK+VTVVLYKPVHRRGSS
Sbjct: 61  AGGTLPLPQNVVLNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPVHRRGSS 115

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BLAST of MC02g0270 vs. NCBI nr
Match: XP_004145755.1 (SNF1-related protein kinase regulatory subunit beta-3 [Cucumis sativus] >XP_008465360.1 PREDICTED: SNF1-related protein kinase regulatory subunit beta-3 [Cucumis melo] >XP_008465361.1 PREDICTED: SNF1-related protein kinase regulatory subunit beta-3 [Cucumis melo] >XP_011657018.1 SNF1-related protein kinase regulatory subunit beta-3 [Cucumis sativus] >XP_016903370.1 PREDICTED: SNF1-related protein kinase regulatory subunit beta-3 [Cucumis melo] >XP_031742408.1 SNF1-related protein kinase regulatory subunit beta-3 [Cucumis sativus] >KAA0035235.1 SNF1-related protein kinase regulatory subunit beta-3 isoform X2 [Cucumis melo var. makuwa] >KGN46863.1 hypothetical protein Csa_020718 [Cucumis sativus] >TYK22390.1 SNF1-related protein kinase regulatory subunit beta-3 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 218 bits (556), Expect = 2.38e-71
Identity = 105/117 (89.74%), Postives = 109/117 (93.16%), Query Frame = 0


Query: 1   MNNPYSEDSDQTTVVGFEVPNSPDSTYNNLYLGSEDEARDPPFAPPHLQHTLLSHPASRD 60
           MNN YSEDSDQTTVVGFEVP SPDSTYNN+Y+GSEDEARDPP  PPHLQHTLLS PASRD
Sbjct: 1   MNNLYSEDSDQTTVVGFEVPKSPDSTYNNIYVGSEDEARDPPLVPPHLQHTLLSQPASRD 60

Query: 61  AGGTLPLPHNVILNHLYIENRETPRSVVALGFTHRFRSKFVTVVLYKPVHRRGSSRA 117
           AG TLPLP NVILNHL+IENRETPRSVVALGFTHRF SK+VTVVLYKPVHRRGSSRA
Sbjct: 61  AGETLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPVHRRGSSRA 117

[Close]

BLAST of MC02g0270 vs. NCBI nr
Match: XP_022996167.1 (SNF1-related protein kinase regulatory subunit beta-3-like [Cucurbita maxima] >XP_022996168.1 SNF1-related protein kinase regulatory subunit beta-3-like [Cucurbita maxima] >XP_022996169.1 SNF1-related protein kinase regulatory subunit beta-3-like [Cucurbita maxima])

HSP 1 Score: 218 bits (554), Expect = 4.81e-71
Identity = 102/115 (88.70%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 1   MNNPYSEDSDQTTVVGFEVPNSPDSTYNNLYLGSEDEARDPPFAPPHLQHTLLSHPASRD 60
           MNNP+ EDSDQTTVVGFEVP SPDSTYNN+YLGSED+ARDPP  PPHLQHTLLSHPA RD
Sbjct: 1   MNNPFPEDSDQTTVVGFEVPKSPDSTYNNVYLGSEDDARDPPPVPPHLQHTLLSHPAGRD 60

Query: 61  AGGTLPLPHNVILNHLYIENRETPRSVVALGFTHRFRSKFVTVVLYKPVHRRGSS 115
           AGGTLPLP NV+LNHL+IENRETPRSVVALGFTHRF SK+VTVVLYKPVHRRGSS
Sbjct: 61  AGGTLPLPQNVVLNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPVHRRGSS 115

[Close]

BLAST of MC02g0270 vs. NCBI nr
Match: XP_038902942.1 (SNF1-related protein kinase regulatory subunit beta-3 [Benincasa hispida] >XP_038902943.1 SNF1-related protein kinase regulatory subunit beta-3 [Benincasa hispida])

HSP 1 Score: 213 bits (541), Expect = 4.62e-69
Identity = 103/117 (88.03%), Postives = 107/117 (91.45%), Query Frame = 0


Query: 1   MNNPYSEDSDQTTVVGFEVPNSPDSTYNNLYLGSEDEARDPPFAPPHLQHTLLSHPASRD 60
           MNN  SEDSDQ TVVGFEVP SPDSTYNN+Y+GSEDEARDPP  PPHLQHTLLS PASRD
Sbjct: 1   MNNLCSEDSDQNTVVGFEVPKSPDSTYNNVYVGSEDEARDPPLVPPHLQHTLLSQPASRD 60

Query: 61  AGGTLPLPHNVILNHLYIENRETPRSVVALGFTHRFRSKFVTVVLYKPVHRRGSSRA 117
           AG TLPLP NVILNHL+IENRETPRSVVALGFTHRF SK+VTVVLYKPVHRRGSSRA
Sbjct: 61  AGETLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPVHRRGSSRA 117

[Close]

BLAST of MC02g0270 vs. ExPASy TrEMBL
Match: A0A6J1CG13 (SNF1-related protein kinase regulatory subunit beta-3 OS=Momordica charantia OX=3673 GN=LOC111011337 PE=3 SV=1)

HSP 1 Score: 244 bits (623), Expect = 6.93e-82
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MNNPYSEDSDQTTVVGFEVPNSPDSTYNNLYLGSEDEARDPPFAPPHLQHTLLSHPASRD 60
           MNNPYSEDSDQTTVVGFEVPNSPDSTYNNLYLGSEDEARDPPFAPPHLQHTLLSHPASRD
Sbjct: 1   MNNPYSEDSDQTTVVGFEVPNSPDSTYNNLYLGSEDEARDPPFAPPHLQHTLLSHPASRD 60

Query: 61  AGGTLPLPHNVILNHLYIENRETPRSVVALGFTHRFRSKFVTVVLYKPVHRRGSSRA 117
           AGGTLPLPHNVILNHLYIENRETPRSVVALGFTHRFRSKFVTVVLYKPVHRRGSSRA
Sbjct: 61  AGGTLPLPHNVILNHLYIENRETPRSVVALGFTHRFRSKFVTVVLYKPVHRRGSSRA 117

[Close]

BLAST of MC02g0270 vs. ExPASy TrEMBL
Match: A0A6J1H1Z8 (SNF1-related protein kinase regulatory subunit beta-3-like OS=Cucurbita moschata OX=3662 GN=LOC111459640 PE=3 SV=1)

HSP 1 Score: 219 bits (558), Expect = 5.71e-72
Identity = 103/115 (89.57%), Postives = 109/115 (94.78%), Query Frame = 0


Query: 1   MNNPYSEDSDQTTVVGFEVPNSPDSTYNNLYLGSEDEARDPPFAPPHLQHTLLSHPASRD 60
           MNNP+ EDSDQTTVVGFEVP SPDSTYNN+YLGSED+ARDPP  PPHLQHTLLSHPASRD
Sbjct: 1   MNNPFPEDSDQTTVVGFEVPKSPDSTYNNVYLGSEDDARDPPPVPPHLQHTLLSHPASRD 60

Query: 61  AGGTLPLPHNVILNHLYIENRETPRSVVALGFTHRFRSKFVTVVLYKPVHRRGSS 115
           AGGTLPLP NV+LNHL+IENRETPRSVVALGFTHRF SK+VTVVLYKPVHRRGSS
Sbjct: 61  AGGTLPLPQNVVLNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPVHRRGSS 115

[Close]

BLAST of MC02g0270 vs. ExPASy TrEMBL
Match: A0A1S3CP39 (SNF1-related protein kinase regulatory subunit beta-3 OS=Cucumis melo OX=3656 GN=LOC103502997 PE=3 SV=1)

HSP 1 Score: 218 bits (556), Expect = 1.15e-71
Identity = 105/117 (89.74%), Postives = 109/117 (93.16%), Query Frame = 0


Query: 1   MNNPYSEDSDQTTVVGFEVPNSPDSTYNNLYLGSEDEARDPPFAPPHLQHTLLSHPASRD 60
           MNN YSEDSDQTTVVGFEVP SPDSTYNN+Y+GSEDEARDPP  PPHLQHTLLS PASRD
Sbjct: 1   MNNLYSEDSDQTTVVGFEVPKSPDSTYNNIYVGSEDEARDPPLVPPHLQHTLLSQPASRD 60

Query: 61  AGGTLPLPHNVILNHLYIENRETPRSVVALGFTHRFRSKFVTVVLYKPVHRRGSSRA 117
           AG TLPLP NVILNHL+IENRETPRSVVALGFTHRF SK+VTVVLYKPVHRRGSSRA
Sbjct: 61  AGETLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPVHRRGSSRA 117

[Close]

BLAST of MC02g0270 vs. ExPASy TrEMBL
Match: A0A5A7T1A3 (SNF1-related protein kinase regulatory subunit beta-3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold173G00140 PE=3 SV=1)

HSP 1 Score: 218 bits (556), Expect = 1.15e-71
Identity = 105/117 (89.74%), Postives = 109/117 (93.16%), Query Frame = 0


Query: 1   MNNPYSEDSDQTTVVGFEVPNSPDSTYNNLYLGSEDEARDPPFAPPHLQHTLLSHPASRD 60
           MNN YSEDSDQTTVVGFEVP SPDSTYNN+Y+GSEDEARDPP  PPHLQHTLLS PASRD
Sbjct: 1   MNNLYSEDSDQTTVVGFEVPKSPDSTYNNIYVGSEDEARDPPLVPPHLQHTLLSQPASRD 60

Query: 61  AGGTLPLPHNVILNHLYIENRETPRSVVALGFTHRFRSKFVTVVLYKPVHRRGSSRA 117
           AG TLPLP NVILNHL+IENRETPRSVVALGFTHRF SK+VTVVLYKPVHRRGSSRA
Sbjct: 61  AGETLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPVHRRGSSRA 117

[Close]

BLAST of MC02g0270 vs. ExPASy TrEMBL
Match: A0A0A0KBG3 (AMPKBI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G147560 PE=3 SV=1)

HSP 1 Score: 218 bits (556), Expect = 1.15e-71
Identity = 105/117 (89.74%), Postives = 109/117 (93.16%), Query Frame = 0


Query: 1   MNNPYSEDSDQTTVVGFEVPNSPDSTYNNLYLGSEDEARDPPFAPPHLQHTLLSHPASRD 60
           MNN YSEDSDQTTVVGFEVP SPDSTYNN+Y+GSEDEARDPP  PPHLQHTLLS PASRD
Sbjct: 1   MNNLYSEDSDQTTVVGFEVPKSPDSTYNNIYVGSEDEARDPPLVPPHLQHTLLSQPASRD 60

Query: 61  AGGTLPLPHNVILNHLYIENRETPRSVVALGFTHRFRSKFVTVVLYKPVHRRGSSRA 117
           AG TLPLP NVILNHL+IENRETPRSVVALGFTHRF SK+VTVVLYKPVHRRGSSRA
Sbjct: 61  AGETLPLPQNVILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPVHRRGSSRA 117

[Close]

BLAST of MC02g0270 vs. TAIR 10
Match: AT2G28060.1 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 152.9 bits (385), Expect = 1.6e-37
Identity = 74/115 (64.35%), Postives = 89/115 (77.39%), Query Frame = 0


Query: 1   MNNPYSEDSDQTTVVGFEVPNSPDSTYNNLYLGSEDEARDPPFAPPHLQHTLLSHPASRD 60
           MN+   +D + TTVVGFEVP SP S+YNN+Y  +EDE RDPP  PPHLQH+LL +  S +
Sbjct: 1   MNSQNPDDHEDTTVVGFEVPVSPVSSYNNVYSSTEDETRDPPAVPPHLQHSLLGNQGSME 60

Query: 61  AGGTLPLPHNVILNHLYIENRETPRSVVALGFTHRFRSKFVTVVLYKPVHRRGSS 116
                  P NV+LNHLYIENR+ PRSVVALGF+HRFR+KFVTVV+YKPV RRGS+
Sbjct: 61  LAYA---PQNVVLNHLYIENRDAPRSVVALGFSHRFRTKFVTVVIYKPVQRRGSA 112

[Close]

BLAST of MC02g0270 vs. TAIR 10
Match: AT4G16360.1 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 113.6 bits (283), Expect = 1.1e-25
Identity = 56/103 (54.37%), Postives = 76/103 (73.79%), Query Frame = 0


Query: 10  DQTTVVGFEVPNSPDSTYNNLYLGSEDEARDPPFAPPHLQHTLLSHPASR-DAGGTLPLP 69
           D  ++ GFE P SP+++Y+NL LG+ED +++PP  PPHLQ TLL+ PA+  D    LP P
Sbjct: 157 DIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRP 216

Query: 70  HNVILNHLYIENRETPRSVVALGFTHRFRSKFVTVVLYKPVHR 112
            +VILNHLY++  ++  SVVALG THRF +K+VTVVLYK + R
Sbjct: 217 QHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYKSLQR 259

[Close]

BLAST of MC02g0270 vs. TAIR 10
Match: AT4G16360.2 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 113.6 bits (283), Expect = 1.1e-25
Identity = 56/103 (54.37%), Postives = 76/103 (73.79%), Query Frame = 0


Query: 10  DQTTVVGFEVPNSPDSTYNNLYLGSEDEARDPPFAPPHLQHTLLSHPASR-DAGGTLPLP 69
           D  ++ GFE P SP+++Y+NL LG+ED +++PP  PPHLQ TLL+ PA+  D    LP P
Sbjct: 156 DIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRP 215

Query: 70  HNVILNHLYIENRETPRSVVALGFTHRFRSKFVTVVLYKPVHR 112
            +VILNHLY++  ++  SVVALG THRF +K+VTVVLYK + R
Sbjct: 216 QHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYKSLQR 258

[Close]

BLAST of MC02g0270 vs. TAIR 10
Match: AT4G16360.3 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 113.6 bits (283), Expect = 1.1e-25
Identity = 56/103 (54.37%), Postives = 76/103 (73.79%), Query Frame = 0


Query: 10  DQTTVVGFEVPNSPDSTYNNLYLGSEDEARDPPFAPPHLQHTLLSHPASR-DAGGTLPLP 69
           D  ++ GFE P SP+++Y+NL LG+ED +++PP  PPHLQ TLL+ PA+  D    LP P
Sbjct: 159 DIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVPPHLQMTLLNLPAANPDIPSPLPRP 218

Query: 70  HNVILNHLYIENRETPRSVVALGFTHRFRSKFVTVVLYKPVHR 112
            +VILNHLY++  ++  SVVALG THRF +K+VTVVLYK + R
Sbjct: 219 QHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYKSLQR 261

[Close]

BLAST of MC02g0270 vs. TAIR 10
Match: AT5G21170.1 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 92.4 bits (228), Expect = 2.5e-19
Identity = 46/99 (46.46%), Postives = 63/99 (63.64%), Query Frame = 0


Query: 13  TVVGFEVPNSPDSTYNNLYLGSEDEARDPPFAPPHLQHTLLSHPASRDAGGTLPLPHNVI 72
           ++V FE P SPD +Y      +ED A++P   PP L  TLL    + +       P +V+
Sbjct: 188 SIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQLHLTLL---GTTEETAIATKPQHVV 247

Query: 73  LNHLYIENRETPRSVVALGFTHRFRSKFVTVVLYKPVHR 112
           LNH++IE   TP+S+VALG THRF SK++TVVLYKP+ R
Sbjct: 248 LNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYKPLTR 283

The following BLAST results are available for this feature:

BLAST of MC02g0270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUU8	2.2e-36	64.35	SNF1-related protein kinase regulatory subunit beta-3 OS=Arabidopsis thaliana OX...	[more]
Q9SCY5	1.5e-24	54.37	SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX...	[more]
Q84VQ1	3.6e-18	46.46	SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX...	[more]
Q9QZH4	1.4e-09	37.89	5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=...	[more]
Q6PAM0	5.2e-09	36.84	5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab...	[more]

BLAST of MC02g0270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140750.1	1.43e-81	100.00	SNF1-related protein kinase regulatory subunit beta-3 [Momordica charantia] >XP_...	[more]
XP_022958406.1	1.18e-71	89.57	SNF1-related protein kinase regulatory subunit beta-3-like [Cucurbita moschata] ...	[more]
XP_004145755.1	2.38e-71	89.74	SNF1-related protein kinase regulatory subunit beta-3 [Cucumis sativus] >XP_0084...	[more]
XP_022996167.1	4.81e-71	88.70	SNF1-related protein kinase regulatory subunit beta-3-like [Cucurbita maxima] >X...	[more]
XP_038902942.1	4.62e-69	88.03	SNF1-related protein kinase regulatory subunit beta-3 [Benincasa hispida] >XP_03...	[more]

BLAST of MC02g0270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CG13	6.93e-82	100.00	SNF1-related protein kinase regulatory subunit beta-3 OS=Momordica charantia OX=...	[more]
A0A6J1H1Z8	5.71e-72	89.57	SNF1-related protein kinase regulatory subunit beta-3-like OS=Cucurbita moschata...	[more]
A0A1S3CP39	1.15e-71	89.74	SNF1-related protein kinase regulatory subunit beta-3 OS=Cucumis melo OX=3656 GN...	[more]
A0A5A7T1A3	1.15e-71	89.74	SNF1-related protein kinase regulatory subunit beta-3 isoform X2 OS=Cucumis melo...	[more]
A0A0A0KBG3	1.15e-71	89.74	AMPKBI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G147560 PE=3...	[more]

BLAST of MC02g0270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28060.1	1.6e-37	64.35	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.1	1.1e-25	54.37	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.2	1.1e-25	54.37	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.3	1.1e-25	54.37	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT5G21170.1	2.5e-19	46.46	5'-AMP-activated protein kinase beta-2 subunit protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006828	Association with the SNF1 complex (ASC) domain	SMART	SM01010	AMPKBI_2	coord: 20..109 e-value: 1.1E-28 score: 111.2
IPR006828	Association with the SNF1 complex (ASC) domain	PFAM	PF04739	AMPKBI	coord: 38..108 e-value: 8.1E-21 score: 74.1
None	No IPR available	GENE3D	6.20.250.60		coord: 13..109 e-value: 3.2E-24 score: 86.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
IPR043554	SNF1-related protein kinase regulatory subunit beta	PANTHER	PTHR46316	SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1	coord: 1..115
IPR030067	SNF1-related protein kinase regulatory subunit beta-3	PANTHER	PTHR46316:SF5	SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-3	coord: 1..115
IPR037256	ASC domain superfamily	SUPERFAMILY	160219	AMPKBI-like	coord: 12..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g0270.1	MC02g0270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043562	cellular response to nitrogen levels
biological_process	GO:0016310	phosphorylation
biological_process	GO:0009744	response to sucrose
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0005515	protein binding