MC02g0264 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g0264
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	50S ribosomal protein L18
Location	MC02: 2430444 .. 2433724 (-)
RNA-Seq Expression	MC02g0264
Synteny	MC02g0264

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGAACCGCTTCGCGGATTCGTTTGAGGCAGCCTCTTTGCCATTCCCTTTCCCAAACTAAAACTGAATTGGCTGCCTTCGTTTTACCTACTTCTTAAAATTCAGGTTCCTCAAAATTTTAGAGTTTTTTCTCTAAATTTTGCGGAGTTTTACATTGCTGAACGTCATTTAACTGAATCATTTGATTTCTCTTTCTCATAATTAATTGCAGATATCTTGGGAATTCAGATTATTGTTTCGTTGTCATCTGTGGGTTTCAGTCCGCTTCCTTGGGGCTGTTGATTGCTTATTGAAGGTTCAAATCTCTAACCATTCAGGTCAGGCCCCCCCTTGAGCTACAGTCTTTGATTTCTCATGCATTCTAGAATCCTGCCAAAGCTTATAAAAGTTAAAATGTTTGCTTTTTTCGTTTCTTGATTCTTGTGGTGTGGTTTTATTTCTCTTTCTGGTTGGAAATGGCTGCAGCTAAGCTCAGATGTACTAACCATCGGATACTATGCATACGCTTATAATGTGTCTGTTTCCGTAATGAATGATTTCATTACATCCCCCATCTGTAACCTTCCTGGTTCGAGCTGGATTGAGGTTTCTTCCTTAAGGGTTTCAATCTTTATTTTCCTTTTAAAATCTTTTTTGTCTCGTTAATTTTCACTCTATGCATGGTGAATTGAATTTATCTGCAACCAAATAAGGTTTCTTTCTCGAGTTTACGCATCTATCATGATGAATGTACTGCAAGTCTCCTTTACTGTATTTGTTGTTTTTAAAATGAAATGATCTATAAGCTATACTGTTTCCAAGTCAACTTGAGTAATGGCTGATGAAATATGTTAATAATGCAATTTTGAGGATGGAAAGCCTTTATCTTATTGCAATTTTTGGCAATGATTTATTTTGTTACTTAGCAATTAAGTGTGTGATTTTCATTGATTTGTTCGTTTGTTTAATCATTTGTTGCTCCTTTATTGTATACTTCTTACAATCTTTTGTTTTCTTCTGTTTGTGGATCTATCATTAAAAGGTTAGGCAGGCTTTTTTTTGTAATGTCTCTGGCTTTATTGTGACTTCTCTTGAAGGTTATGGATAAGTATTTGTTAACTTGGTTATTCAAGGTTCATTTGATTCTTGCTCGAATTCTTTCCCTTTGCTTCAGTACACAATAGCAATGTTTCTGGATATCTGCAATAATTCGCAATCTTATTGCTGGTGCTTTCATGCCTTGCTTTGCAGTGGTTGCTAGTTACCTTTACCCCAAAATTTTAGCCCCATTGATATTATGGATGGTGAATTGGTTCATTAAAAGATAGGCATTAGAAGCCTATATTGATTCATACCAATGGGAACATATTTTATATGAAACGAATATTTCAACAAATGTAATGAAATACGAAAAAGCTACTCTTGTGTAACACACACACAGAGAAAAAAAACTCCACTTGGAAGTGTGACCAAAGAGGGGAACAATTACAAAACTCCTTAGTACATATTAATATTTATGGGGTTCCATCTCAAAACCAATCGACAATGAGAGTAGCCCATGTCTATTATAAACTATTTTAAGGTCCATTTCCTTTTTAATGTGGGATCCTTAACATGCCCCCTTAAGATCGTGGCTCTTTGGCTCAGCGATCTTGGTCGGATCCCATTTTTGGGCTTTGATACCATATTAATATTTATGGGGTTCCTCTCATAGCCAATTGGTTTTGAGATAGAACCTCATAAATATTAATAGTGGATGACCTCTAAAGGAGACACCAAAACTAACATTGTTCCATGATTTCAAATAATCCCTCAAAATTTCACAAAAACTTGTTCAATCAACCATATCTTCTTTGTGTATTCTCGAGCACTAGCGATTGTAAGGGCCCAATGATCGTTTTTGTGCATCTATCTGAGATGATGTTGAAAATTAAAAGTAAATAAACAAATAAAATAAGCAACACAAACATTAGGGAGAATCGAATGCCCTGAAACCACAAGGTTCATACATAGAGGGTGAGTCAAGGCCTAAAATCAGGCCGAATGGTATAGTCAATGGACAACCAACAAGGGTATGTTTTATTACTAGAGGGATGGAGGAGGTTAAGCCAAAAGATGGTTACCGACTCACAGTAGTGTGTGGTTACTTATCGCCTGAATGAGATACAGATCCGAGATCCCCATTCCTGATCTTGTTACAATGCTTGTCCTTAAGTGTTGTAATTTTCTTGGCTTTGAATGGAAACTAAATAATACAACATGTTTATTCTTCTTACCATCGAGTCTGTTACACTATCCATATATATTTCTGTTTGGCATACCAATTCATAGGATATTTAATATTTTGGATAGGTGGTTCGAAGGGGATTTTGAACACTTAAACTGCTGGAAATGACAGTATTAAAGCGCTATGTGCTGCGATTATTCATATCTTTGAAGTACATAACAGCGAATGTGGTAGATAGAAATAATGGACGAGTTGTGGCAACTGCGTCCACAGTTGAACACTCCATCAAGGGCTCACTTGAATGTGGCCGGTCTTGTAATGCCAAAGCAGCAGCAGTTGTTGGAGAGGTGCTGGCTATGCGACTCAAAGTCGACGGTCTTGAACAGGGGCAAGGACGAGGAATTCACGTGGACGTAAATAAGGAAATTGAGAAAAAAGGCTTAAAAAACTGCACAAAAATCTGGGCTATTGTCAACTCTCTTAGGAATGGTGGAGTTAAGCTTATTCTCGACGACAATGTTGATGGTGCATCTAGGCCAGGTTATCAGTAAGCACATCCAAAATCGATCTTATCATATCCTTCAGTGGGAAAAAATGGGGTGAGGATGGAGCTCAGCTCGACCCATCAGTATGATGAGCTGCTGCTATCTGAAGGCTAAATGTAATGAACTATCTTTATCAGTTGCCATCAGATTAAACCATCAGTGTTTGTCAGCACATGATCTTTGGAAGTTTGTAAAGTAGAGACAACTTTCTAGCTCCACTTTTGTAAAGAGTTGCACAGTAATAATGATAAATAGCCATTTGGGTATTGATTTTATCACAGTGAAATGGCCCTGTATGAAGAACTTCACACTCTGCTTATTCTTCTCTCTTGTAGGTTTAGTTTTGTTTTGGTTGATTTCTTCCATCTGGCTGTCTCTGCCTGCTGGTGCAGCAAGTGCCTTCTGATGAGTCTCTCTTGCGTGGAAGCAAGGATTGTAGAACAAAAGATAATAATAAAGTGCTTTTCAGGCATCTGGAAGAATGATTCCATTTGATGAGAAGTTGATTTTGAATGTGAGCTTATCTTCTAT

mRNA sequence

CGGAACCGCTTCGCGGATTCGTTTGAGGCAGCCTCTTTGCCATTCCCTTTCCCAAACTAAAACTGAATTGGCTGCCTTCGTTTTACCTACTTCTTAAAATTCAGATATCTTGGGAATTCAGATTATTGTTTCGTTGTCATCTGTGGGTTTCAGTCCGCTTCCTTGGGGCTGTTGATTGCTTATTGAAGGTTCAAATCTCTAACCATTCAGGTGGTTCGAAGGGGATTTTGAACACTTAAACTGCTGGAAATGACAGTATTAAAGCGCTATGTGCTGCGATTATTCATATCTTTGAAGTACATAACAGCGAATGTGGTAGATAGAAATAATGGACGAGTTGTGGCAACTGCGTCCACAGTTGAACACTCCATCAAGGGCTCACTTGAATGTGGCCGGTCTTGTAATGCCAAAGCAGCAGCAGTTGTTGGAGAGGTGCTGGCTATGCGACTCAAAGTCGACGGTCTTGAACAGGGGCAAGGACGAGGAATTCACGTGGACGTAAATAAGGAAATTGAGAAAAAAGGCTTAAAAAACTGCACAAAAATCTGGGCTATTGTCAACTCTCTTAGGAATGGTGGAGTTAAGCTTATTCTCGACGACAATGTTGATGGTGCATCTAGGCCAGGTTATCAGTAAGCACATCCAAAATCGATCTTATCATATCCTTCAGTGGGAAAAAATGGGGTGAGGATGGAGCTCAGCTCGACCCATCAGTATGATGAGCTGCTGCTATCTGAAGGCTAAATGTAATGAACTATCTTTATCAGTTGCCATCAGATTAAACCATCAGTGTTTGTCAGCACATGATCTTTGGAAGTTTGTAAAGTAGAGACAACTTTCTAGCTCCACTTTTGTAAAGAGTTGCACAGTAATAATGATAAATAGCCATTTGGGTATTGATTTTATCACAGTGAAATGGCCCTGTATGAAGAACTTCACACTCTGCTTATTCTTCTCTCTTGTAGGTTTAGTTTTGTTTTGGTTGATTTCTTCCATCTGGCTGTCTCTGCCTGCTGGTGCAGCAAGTGCCTTCTGATGAGTCTCTCTTGCGTGGAAGCAAGGATTGTAGAACAAAAGATAATAATAAAGTGCTTTTCAGGCATCTGGAAGAATGATTCCATTTGATGAGAAGTTGATTTTGAATGTGAGCTTATCTTCTAT

Coding sequence (CDS)

ATGACAGTATTAAAGCGCTATGTGCTGCGATTATTCATATCTTTGAAGTACATAACAGCGAATGTGGTAGATAGAAATAATGGACGAGTTGTGGCAACTGCGTCCACAGTTGAACACTCCATCAAGGGCTCACTTGAATGTGGCCGGTCTTGTAATGCCAAAGCAGCAGCAGTTGTTGGAGAGGTGCTGGCTATGCGACTCAAAGTCGACGGTCTTGAACAGGGGCAAGGACGAGGAATTCACGTGGACGTAAATAAGGAAATTGAGAAAAAAGGCTTAAAAAACTGCACAAAAATCTGGGCTATTGTCAACTCTCTTAGGAATGGTGGAGTTAAGCTTATTCTCGACGACAATGTTGATGGTGCATCTAGGCCAGGTTATCAGTAA

Protein sequence

MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGLKNCTKIWAIVNSLRNGGVKLILDDNVDGASRPGYQ

Homology

[Close]

BLAST of MC02g0264 vs. ExPASy Swiss-Prot
Match: Q5P316 (50S ribosomal protein L18 OS=Aromatoleum aromaticum (strain EbN1) OX=76114 GN=rplR PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 8.4e-05
Identity = 35/109 (32.11%), Postives = 56/109 (51.38%), Query Frame = 0


Query: 4   LKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKGSLECGRSCNAKAAAVVGEVL 63
           LK   L +F +  +I A V+D +  RV+A ASTVE  ++  L  G   N +AA VVG+++
Sbjct: 21  LKSVRLTVFRTNSHIYAQVIDGSGSRVLAAASTVEADVRSQLPNGG--NKQAAQVVGKLI 80

Query: 64  AMRLKVDGLEQGQGRGIHVDVNKEIEKKGLKNCTKIWAIVNSLRNGGVK 113
           A R K  G+E               ++ G +   ++ A+  + R GG+K
Sbjct: 81  AERAKAAGVEA-----------VAFDRAGFQYHGRVKALAEAAREGGLK 116

[Close]

BLAST of MC02g0264 vs. ExPASy Swiss-Prot
Match: Q5F5U3 (50S ribosomal protein L18 OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) OX=242231 GN=rplR PE=3 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 7.1e-04
Identity = 28/71 (39.44%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 4  LKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKGSLECGRSCNAKAAAVVGEVL 63
          LK   L +F S  +I A V+     +V+A AST+E  ++GSL+ G   N +AAA+VG+ +
Sbjct: 21 LKMVRLCVFRSNNHIYAQVISAEGDKVLAQASTLEAEVRGSLKSG--SNVEAAAIVGKRI 80

Query: 64 AMRLKVDGLEQ 75
          A + K  G+E+
Sbjct: 81 AEKAKAAGVEK 89

[Close]

BLAST of MC02g0264 vs. ExPASy Swiss-Prot
Match: A9M3V0 (50S ribosomal protein L18 OS=Neisseria meningitidis serogroup C (strain 053442) OX=374833 GN=rplR PE=3 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 7.1e-04
Identity = 28/71 (39.44%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 4  LKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKGSLECGRSCNAKAAAVVGEVL 63
          LK   L +F S  +I A V+     +V+A AST+E  ++GSL+ G   N +AAA+VG+ +
Sbjct: 21 LKMVRLCVFRSNNHIYAQVISAEGDKVLAQASTLEAEVRGSLKSG--SNVEAAAIVGKRI 80

Query: 64 AMRLKVDGLEQ 75
          A + K  G+E+
Sbjct: 81 AEKAKAAGVEK 89

[Close]

BLAST of MC02g0264 vs. ExPASy Swiss-Prot
Match: Q9JQQ6 (50S ribosomal protein L18 OS=Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491) OX=122587 GN=rplR PE=3 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 7.1e-04
Identity = 28/71 (39.44%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 4  LKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKGSLECGRSCNAKAAAVVGEVL 63
          LK   L +F S  +I A V+     +V+A AST+E  ++GSL+ G   N +AAA+VG+ +
Sbjct: 21 LKMVRLCVFRSNNHIYAQVISAEGDKVLAQASTLEAEVRGSLKSG--SNVEAAAIVGKRI 80

Query: 64 AMRLKVDGLEQ 75
          A + K  G+E+
Sbjct: 81 AEKAKAAGVEK 89

[Close]

BLAST of MC02g0264 vs. ExPASy Swiss-Prot
Match: Q7DDT0 (50S ribosomal protein L18 OS=Neisseria meningitidis serogroup B (strain MC58) OX=122586 GN=rplR PE=3 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 7.1e-04
Identity = 28/71 (39.44%), Postives = 44/71 (61.97%), Query Frame = 0


Query: 4  LKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKGSLECGRSCNAKAAAVVGEVL 63
          LK   L +F S  +I A V+     +V+A AST+E  ++GSL+ G   N +AAA+VG+ +
Sbjct: 21 LKMVRLCVFRSNNHIYAQVISAEGDKVLAQASTLEAEVRGSLKSG--SNVEAAAIVGKRI 80

Query: 64 AMRLKVDGLEQ 75
          A + K  G+E+
Sbjct: 81 AEKAKAAGVEK 89

[Close]

BLAST of MC02g0264 vs. NCBI nr
Match: XP_022140774.1 (uncharacterized protein LOC111011356 [Momordica charantia] >XP_022140775.1 uncharacterized protein LOC111011356 [Momordica charantia])

HSP 1 Score: 250 bits (639), Expect = 1.18e-83
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKGSLECGRSCNAKAAAVVG 60
           MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKGSLECGRSCNAKAAAVVG
Sbjct: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKGSLECGRSCNAKAAAVVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGLKNCTKIWAIVNSLRNGGVKLILDDNVD 120
           EVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGLKNCTKIWAIVNSLRNGGVKLILDDNVD
Sbjct: 61  EVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGLKNCTKIWAIVNSLRNGGVKLILDDNVD 120

Query: 121 GASRPGYQ 128
           GASRPGYQ
Sbjct: 121 GASRPGYQ 128

[Close]

BLAST of MC02g0264 vs. NCBI nr
Match: XP_038901007.1 (uncharacterized protein LOC120088052 [Benincasa hispida] >XP_038901008.1 uncharacterized protein LOC120088052 [Benincasa hispida] >XP_038901009.1 uncharacterized protein LOC120088052 [Benincasa hispida])

HSP 1 Score: 228 bits (580), Expect = 1.17e-74
Identity = 117/128 (91.41%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKGSLECGRSCNAKAAAVVG 60
           MTVLKRYVLRLFISLKYITANVVDRNNGR+VATASTVEHSIKGSLECGRSCNAKAAAVVG
Sbjct: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGLKNCTKIWAIVNSLRNGGVKLILDDNVD 120
           EVLAMRLKVDGLEQGQGRGIH DVNKEIEKKG KN TKIWAIVN+L+N GVKLILD+NVD
Sbjct: 61  EVLAMRLKVDGLEQGQGRGIHADVNKEIEKKGFKNRTKIWAIVNALKNNGVKLILDNNVD 120

Query: 121 GASRPGYQ 128
            ASR  YQ
Sbjct: 121 DASRSSYQ 128

[Close]

BLAST of MC02g0264 vs. NCBI nr
Match: XP_023511782.1 (uncharacterized protein LOC111776697 [Cucurbita pepo subsp. pepo] >XP_023511783.1 uncharacterized protein LOC111776697 [Cucurbita pepo subsp. pepo] >XP_023511784.1 uncharacterized protein LOC111776697 [Cucurbita pepo subsp. pepo] >XP_023511785.1 uncharacterized protein LOC111776697 [Cucurbita pepo subsp. pepo] >XP_023511786.1 uncharacterized protein LOC111776697 [Cucurbita pepo subsp. pepo] >XP_023511787.1 uncharacterized protein LOC111776697 [Cucurbita pepo subsp. pepo] >XP_023511788.1 uncharacterized protein LOC111776697 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 227 bits (579), Expect = 1.67e-74
Identity = 116/128 (90.62%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKGSLECGRSCNAKAAAVVG 60
           MTVLKRYV+RLFISLKYITANVVDRNNGR+VATASTVEHSIKGSLECGRSCNAKAAAVVG
Sbjct: 1   MTVLKRYVVRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGLKNCTKIWAIVNSLRNGGVKLILDDNVD 120
           EVLAMRLKVDGLEQGQGRGIH+DVNKEIEKKG KN TKIWAIVNSL+N GVKLILD+N D
Sbjct: 61  EVLAMRLKVDGLEQGQGRGIHMDVNKEIEKKGFKNRTKIWAIVNSLKNNGVKLILDNNDD 120

Query: 121 GASRPGYQ 128
            ASRP Y+
Sbjct: 121 DASRPSYE 128

[Close]

BLAST of MC02g0264 vs. NCBI nr
Match: XP_022943852.1 (uncharacterized protein LOC111448460 [Cucurbita moschata] >XP_022943853.1 uncharacterized protein LOC111448460 [Cucurbita moschata] >XP_022943854.1 uncharacterized protein LOC111448460 [Cucurbita moschata] >XP_022943855.1 uncharacterized protein LOC111448460 [Cucurbita moschata] >XP_022943856.1 uncharacterized protein LOC111448460 [Cucurbita moschata] >XP_022943857.1 uncharacterized protein LOC111448460 [Cucurbita moschata] >XP_022943858.1 uncharacterized protein LOC111448460 [Cucurbita moschata] >XP_022943860.1 uncharacterized protein LOC111448460 [Cucurbita moschata] >KAG7010651.1 rplR, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 227 bits (578), Expect = 2.37e-74
Identity = 115/128 (89.84%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKGSLECGRSCNAKAAAVVG 60
           MTVLKRYV+RLFISLKYITANVVDRNNGR+VATASTVEHSIKGSLECGRSCNAKAAAVVG
Sbjct: 1   MTVLKRYVVRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGLKNCTKIWAIVNSLRNGGVKLILDDNVD 120
           EVLAMRLKVDGLEQGQGRGIH+D+NKEIEKKG KN TKIWAIVNSL+N GVKLILD+N D
Sbjct: 61  EVLAMRLKVDGLEQGQGRGIHMDINKEIEKKGFKNRTKIWAIVNSLKNNGVKLILDNNDD 120

Query: 121 GASRPGYQ 128
            ASRP Y+
Sbjct: 121 DASRPSYE 128

[Close]

BLAST of MC02g0264 vs. NCBI nr
Match: XP_022985582.1 (uncharacterized protein LOC111483610 [Cucurbita maxima] >XP_022985583.1 uncharacterized protein LOC111483610 [Cucurbita maxima] >XP_022985584.1 uncharacterized protein LOC111483610 [Cucurbita maxima] >XP_022985585.1 uncharacterized protein LOC111483610 [Cucurbita maxima] >XP_022985586.1 uncharacterized protein LOC111483610 [Cucurbita maxima] >XP_022985588.1 uncharacterized protein LOC111483610 [Cucurbita maxima] >XP_022985589.1 uncharacterized protein LOC111483610 [Cucurbita maxima] >XP_022985590.1 uncharacterized protein LOC111483610 [Cucurbita maxima])

HSP 1 Score: 224 bits (572), Expect = 1.95e-73
Identity = 114/128 (89.06%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKGSLECGRSCNAKAAAVVG 60
           MTVLKRYV+RLFISLKYITANVVDRNNGR+VATASTVEHSIKGSLECGRSCNAKAAAVVG
Sbjct: 1   MTVLKRYVVRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGLKNCTKIWAIVNSLRNGGVKLILDDNVD 120
           EVLAMRLKVDGLEQGQGRGIH+D+NKEIEKKG KN TKIWAIVNSL+N GVKLILD+N D
Sbjct: 61  EVLAMRLKVDGLEQGQGRGIHMDINKEIEKKGFKNRTKIWAIVNSLKNNGVKLILDNNDD 120

Query: 121 GASRPGYQ 128
            A RP Y+
Sbjct: 121 DAVRPSYE 128

[Close]

BLAST of MC02g0264 vs. ExPASy TrEMBL
Match: A0A6J1CGQ4 (uncharacterized protein LOC111011356 OS=Momordica charantia OX=3673 GN=LOC111011356 PE=4 SV=1)

HSP 1 Score: 250 bits (639), Expect = 5.70e-84
Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKGSLECGRSCNAKAAAVVG 60
           MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKGSLECGRSCNAKAAAVVG
Sbjct: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKGSLECGRSCNAKAAAVVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGLKNCTKIWAIVNSLRNGGVKLILDDNVD 120
           EVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGLKNCTKIWAIVNSLRNGGVKLILDDNVD
Sbjct: 61  EVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGLKNCTKIWAIVNSLRNGGVKLILDDNVD 120

Query: 121 GASRPGYQ 128
           GASRPGYQ
Sbjct: 121 GASRPGYQ 128

[Close]

BLAST of MC02g0264 vs. ExPASy TrEMBL
Match: A0A6J1FXG0 (uncharacterized protein LOC111448460 OS=Cucurbita moschata OX=3662 GN=LOC111448460 PE=4 SV=1)

HSP 1 Score: 227 bits (578), Expect = 1.15e-74
Identity = 115/128 (89.84%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKGSLECGRSCNAKAAAVVG 60
           MTVLKRYV+RLFISLKYITANVVDRNNGR+VATASTVEHSIKGSLECGRSCNAKAAAVVG
Sbjct: 1   MTVLKRYVVRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGLKNCTKIWAIVNSLRNGGVKLILDDNVD 120
           EVLAMRLKVDGLEQGQGRGIH+D+NKEIEKKG KN TKIWAIVNSL+N GVKLILD+N D
Sbjct: 61  EVLAMRLKVDGLEQGQGRGIHMDINKEIEKKGFKNRTKIWAIVNSLKNNGVKLILDNNDD 120

Query: 121 GASRPGYQ 128
            ASRP Y+
Sbjct: 121 DASRPSYE 128

[Close]

BLAST of MC02g0264 vs. ExPASy TrEMBL
Match: A0A6J1JBQ5 (uncharacterized protein LOC111483610 OS=Cucurbita maxima OX=3661 GN=LOC111483610 PE=4 SV=1)

HSP 1 Score: 224 bits (572), Expect = 9.42e-74
Identity = 114/128 (89.06%), Postives = 121/128 (94.53%), Query Frame = 0


Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKGSLECGRSCNAKAAAVVG 60
           MTVLKRYV+RLFISLKYITANVVDRNNGR+VATASTVEHSIKGSLECGRSCNAKAAAVVG
Sbjct: 1   MTVLKRYVVRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGLKNCTKIWAIVNSLRNGGVKLILDDNVD 120
           EVLAMRLKVDGLEQGQGRGIH+D+NKEIEKKG KN TKIWAIVNSL+N GVKLILD+N D
Sbjct: 61  EVLAMRLKVDGLEQGQGRGIHMDINKEIEKKGFKNRTKIWAIVNSLKNNGVKLILDNNDD 120

Query: 121 GASRPGYQ 128
            A RP Y+
Sbjct: 121 DAVRPSYE 128

[Close]

BLAST of MC02g0264 vs. ExPASy TrEMBL
Match: A0A6P3ZI60 (uncharacterized protein LOC107411474 OS=Ziziphus jujuba OX=326968 GN=LOC107411474 PE=4 SV=1)

HSP 1 Score: 222 bits (565), Expect = 1.06e-72
Identity = 113/127 (88.98%), Postives = 120/127 (94.49%), Query Frame = 0


Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKGSLECGRSCNAKAAAVVG 60
           MTVLKRYVLRLFISLKYITANVVDRNNGR VAT+STVEHSIKGSLECGRSCNAKAA+VVG
Sbjct: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRNVATSSTVEHSIKGSLECGRSCNAKAASVVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGLKNCTKIWAIVNSLRNGGVKLILDDNVD 120
           EVLAMRLKV+GLEQGQGRGIHVDVNKE+EKKG KN TKIWAIVNSL+N GVKLILDDN +
Sbjct: 61  EVLAMRLKVEGLEQGQGRGIHVDVNKEVEKKGFKNRTKIWAIVNSLKNNGVKLILDDNDE 120

Query: 121 GASRPGY 127
            +SRP Y
Sbjct: 121 NSSRPSY 127

[Close]

BLAST of MC02g0264 vs. ExPASy TrEMBL
Match: A0A1R3KXD1 (Ribosomal protein L18/L5 OS=Corchorus olitorius OX=93759 GN=COLO4_03696 PE=4 SV=1)

HSP 1 Score: 222 bits (565), Expect = 1.06e-72
Identity = 109/127 (85.83%), Postives = 120/127 (94.49%), Query Frame = 0


Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKGSLECGRSCNAKAAAVVG 60
           MTVLKRYVLRLF+SLKYITANVVDRNNGR+VATASTVEHSIK SLECGRSCNAKAA +VG
Sbjct: 1   MTVLKRYVLRLFMSLKYITANVVDRNNGRIVATASTVEHSIKDSLECGRSCNAKAATIVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGLKNCTKIWAIVNSLRNGGVKLILDDNVD 120
           EVLAMRLKV+GLEQGQGRGIHVDVNKE+EKKG KN TK+WA+VN+L+N GVK+IL+DN D
Sbjct: 61  EVLAMRLKVEGLEQGQGRGIHVDVNKEVEKKGFKNRTKVWAVVNALKNNGVKVILEDNED 120

Query: 121 GASRPGY 127
           G SRPGY
Sbjct: 121 GPSRPGY 127

[Close]

BLAST of MC02g0264 vs. TAIR 10
Match: AT3G45020.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 198.7 bits (504), Expect = 2.7e-51
Identity = 97/120 (80.83%), Postives = 110/120 (91.67%), Query Frame = 0


Query: 1   MTVLKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKGSLECGRSCNAKAAAVVG 60
           MTVLKRYVLRLF+S+KYITANVVDRNNGR+V TASTVEH+IK SLECGR+CNAKAAA+VG
Sbjct: 1   MTVLKRYVLRLFMSIKYITANVVDRNNGRIVTTASTVEHTIKNSLECGRTCNAKAAAIVG 60

Query: 61  EVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGLKNCTKIWAIVNSLRNGGVKLILDDNVD 120
           EVLAMRLKV+GL+ GQGRGIH DV KEIEKKG K+ TK+WA++NSLRN GV LILDD+ D
Sbjct: 61  EVLAMRLKVEGLQDGQGRGIHADVKKEIEKKGFKSRTKVWAVINSLRNNGVTLILDDDDD 120

[Close]

BLAST of MC02g0264 vs. TAIR 10
Match: AT5G27820.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 44.7 bits (104), Expect = 6.6e-05
Identity = 30/111 (27.03%), Postives = 60/111 (54.05%), Query Frame = 0


Query: 4   LKRYVLRLFISLKYITANVVDRNNGRVVATASTVEHSIKGSLECGRSCNAKAAAVVGEVL 63
           LK YVL++  + K++ A V+      V  +AS+ E +++ +++  R  +  AA+ +G++L
Sbjct: 16  LKPYVLKMHFTNKFVHAQVIHSPTATVACSASSQEKALRETMDITR--DVAAASKIGKIL 75

Query: 64  AMRLKVDGLEQGQGRGIHVDVNKEIEKKGLKNCTKIWAIVNSLRNGGVKLI 115
             RL +  +       + + + KE    G     K+ A+++S+R  GVKL+
Sbjct: 76  GERLLMKDIP-----AVTIQMKKEQRYHG-----KVKAVIDSVREAGVKLL 114

The following BLAST results are available for this feature:

BLAST of MC02g0264 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5P316	8.4e-05	32.11	50S ribosomal protein L18 OS=Aromatoleum aromaticum (strain EbN1) OX=76114 GN=rp...	[more]
Q5F5U3	7.1e-04	39.44	50S ribosomal protein L18 OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090...	[more]
A9M3V0	7.1e-04	39.44	50S ribosomal protein L18 OS=Neisseria meningitidis serogroup C (strain 053442) ...	[more]
Q9JQQ6	7.1e-04	39.44	50S ribosomal protein L18 OS=Neisseria meningitidis serogroup A / serotype 4A (s...	[more]
Q7DDT0	7.1e-04	39.44	50S ribosomal protein L18 OS=Neisseria meningitidis serogroup B (strain MC58) OX...	[more]

BLAST of MC02g0264 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140774.1	1.18e-83	100.00	uncharacterized protein LOC111011356 [Momordica charantia] >XP_022140775.1 uncha...	[more]
XP_038901007.1	1.17e-74	91.41	uncharacterized protein LOC120088052 [Benincasa hispida] >XP_038901008.1 unchara...	[more]
XP_023511782.1	1.67e-74	90.63	uncharacterized protein LOC111776697 [Cucurbita pepo subsp. pepo] >XP_023511783....	[more]
XP_022943852.1	2.37e-74	89.84	uncharacterized protein LOC111448460 [Cucurbita moschata] >XP_022943853.1 unchar...	[more]
XP_022985582.1	1.95e-73	89.06	uncharacterized protein LOC111483610 [Cucurbita maxima] >XP_022985583.1 uncharac...	[more]

BLAST of MC02g0264 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CGQ4	5.70e-84	100.00	uncharacterized protein LOC111011356 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A6J1FXG0	1.15e-74	89.84	uncharacterized protein LOC111448460 OS=Cucurbita moschata OX=3662 GN=LOC1114484...	[more]
A0A6J1JBQ5	9.42e-74	89.06	uncharacterized protein LOC111483610 OS=Cucurbita maxima OX=3661 GN=LOC111483610...	[more]
A0A6P3ZI60	1.06e-72	88.98	uncharacterized protein LOC107411474 OS=Ziziphus jujuba OX=326968 GN=LOC10741147...	[more]
A0A1R3KXD1	1.06e-72	85.83	Ribosomal protein L18/L5 OS=Corchorus olitorius OX=93759 GN=COLO4_03696 PE=4 SV=...	[more]

BLAST of MC02g0264 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G45020.1	2.7e-51	80.83	Ribosomal L18p/L5e family protein	[more]
AT5G27820.1	6.6e-05	27.03	Ribosomal L18p/L5e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.420.100		coord: 1..113 e-value: 6.3E-18 score: 67.3
None	No IPR available	PANTHER	PTHR12899:SF12	OS09G0549700 PROTEIN	coord: 1..122
None	No IPR available	CDD	cd00432	Ribosomal_L18_L5e	coord: 5..111 e-value: 1.51034E-17 score: 70.2615
None	No IPR available	SUPERFAMILY	53137	Translational machinery components	coord: 4..111
IPR005484	Ribosomal protein L18	PFAM	PF00861	Ribosomal_L18p	coord: 5..74 e-value: 8.5E-9 score: 35.8
IPR005484	Ribosomal protein L18	PANTHER	PTHR12899	39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL	coord: 1..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g0264.1	MC02g0264.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
molecular_function	GO:0008097	5S rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome