MC02g0202 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g0202
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	protein BIC2
Location	MC02: 1887291 .. 1887593 (+)
RNA-Seq Expression	MC02g0202
Synteny	MC02g0202

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCCCGCCTCCGCGGCTGCTCCCGAGTCGCACGACGGCAGCGGAGTTGAGAAGTTGCTGCAGCCATCGAAGAGTTCTTGCGGTGTCCGCGAGCGGCTAAAGCGGCACCGCGAGGAGGTGGCGGGGAAAGTCACCGTGCCGGAGAAATGGGGCAAGGAGGAGCTGCTTAAGGACTGGATCGACTACTCCGCGTTCGACAGAATCTTGGCCGCCAAGAGAATTGCGACGGCGAGGGCGTCGCTTGCGGCGGAGGGACGGCGGGCAGCCAATTCCCGGCCGGCGTTGAGGGTAGAGAGTAGGTGT

mRNA sequence

AACCCCGCCTCCGCGGCTGCTCCCGAGTCGCACGACGGCAGCGGAGTTGAGAAGTTGCTGCAGCCATCGAAGAGTTCTTGCGGTGTCCGCGAGCGGCTAAAGCGGCACCGCGAGGAGGTGGCGGGGAAAGTCACCGTGCCGGAGAAATGGGGCAAGGAGGAGCTGCTTAAGGACTGGATCGACTACTCCGCGTTCGACAGAATCTTGGCCGCCAAGAGAATTGCGACGGCGAGGGCGTCGCTTGCGGCGGAGGGACGGCGGGCAGCCAATTCCCGGCCGGCGTTGAGGGTAGAGAGTAGGTGT

Coding sequence (CDS)

AACCCCGCCTCCGCGGCTGCTCCCGAGTCGCACGACGGCAGCGGAGTTGAGAAGTTGCTGCAGCCATCGAAGAGTTCTTGCGGTGTCCGCGAGCGGCTAAAGCGGCACCGCGAGGAGGTGGCGGGGAAAGTCACCGTGCCGGAGAAATGGGGCAAGGAGGAGCTGCTTAAGGACTGGATCGACTACTCCGCGTTCGACAGAATCTTGGCCGCCAAGAGAATTGCGACGGCGAGGGCGTCGCTTGCGGCGGAGGGACGGCGGGCAGCCAATTCCCGGCCGGCGTTGAGGGTAGAGAGTAGGTGT

Protein sequence

NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWIDYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESRC

Homology

[Close]

BLAST of MC02g0202 vs. ExPASy Swiss-Prot
Match: Q9LXJ1 (Protein BIC1 OS=Arabidopsis thaliana OX=3702 GN=BIC1 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 5.1e-13
Identity = 46/102 (45.10%), Postives = 65/102 (63.73%), Query Frame = 0


Query: 3   ASAAAPESHDGSGVEKLLQPSKSSCGV---RERLKRHREEVAGKVTVPEKWGKEELLKDW 62
           AS+ + +  D + +E+  + S+    V   RERLK+HR E+AG+V +PE WG+EELLKDW
Sbjct: 37  ASSVSADKKDLALLEEKPKQSQEEDRVDTGRERLKKHRREIAGRVWIPEIWGQEELLKDW 96

Query: 63  IDYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESRC 102
           ID S FD  L    I++AR +L  E RRAA++   L   +RC
Sbjct: 97  IDCSTFDTCLVPAGISSARTALVEEARRAASASGGL--HNRC 136

[Close]

BLAST of MC02g0202 vs. ExPASy Swiss-Prot
Match: Q9M280 (Protein BIC2 OS=Arabidopsis thaliana OX=3702 GN=BIC2 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 6.6e-13
Identity = 47/105 (44.76%), Postives = 63/105 (60.00%), Query Frame = 0


Query: 1   NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWI 60
           +P S+   ++  G+   K   P  +    R+RLKRHREEVAGKV +P+ WGKE LL  W+
Sbjct: 15  SPGSSHRKQNKTGT---KTCFPETTVLSGRDRLKRHREEVAGKVPIPDSWGKEGLLMGWM 74

Query: 61  DYSAFDRILAAKRIATARASLAAEG---RRAANSRP-ALRVESRC 102
           D+S FD    + +I +ARA+L A+      A  SRP  LRVES C
Sbjct: 75  DFSTFDAAFTSSQIVSARAALMADSGDDAGARGSRPQRLRVESSC 116

[Close]

BLAST of MC02g0202 vs. NCBI nr
Match: XP_022153004.1 (protein BIC2 [Momordica charantia])

HSP 1 Score: 192 bits (489), Expect = 1.44e-61
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWI 60
           NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWI
Sbjct: 6   NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWI 65

Query: 61  DYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESRC 101
           DYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESRC
Sbjct: 66  DYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESRC 106

[Close]

BLAST of MC02g0202 vs. NCBI nr
Match: TYK18920.1 (uncharacterized protein E5676_scaffold28061G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 125 bits (314), Expect = 9.76e-35
Identity = 73/101 (72.28%), Postives = 80/101 (79.21%), Query Frame = 0


Query: 1   NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWI 60
           +PA A+  +S    G EKL    K  CGVRERLKRHREEVAGKVTVPEKWGKEELLKDWI
Sbjct: 25  SPAGASTGDSSSTVGPEKL----KGCCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWI 84

Query: 61  DYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESRC 101
           DYSAFDRILAA RIA+ARASLAAEG++   +R   RVESRC
Sbjct: 85  DYSAFDRILAAGRIASARASLAAEGQQ---NRSRRRVESRC 118

[Close]

BLAST of MC02g0202 vs. NCBI nr
Match: XP_008458586.1 (PREDICTED: uncharacterized protein LOC103497945 [Cucumis melo] >KAA0033406.1 uncharacterized protein E6C27_scaffold111G00580 [Cucumis melo var. makuwa])

HSP 1 Score: 124 bits (311), Expect = 2.79e-34
Identity = 72/101 (71.29%), Postives = 80/101 (79.21%), Query Frame = 0


Query: 1   NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWI 60
           +PA A+  +S    G EKL    K  CGVRERLKRHREEVAGKVTVP+KWGKEELLKDWI
Sbjct: 25  SPAGASTGDSSSTVGPEKL----KGCCGVRERLKRHREEVAGKVTVPDKWGKEELLKDWI 84

Query: 61  DYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESRC 101
           DYSAFDRILAA RIA+ARASLAAEG++   +R   RVESRC
Sbjct: 85  DYSAFDRILAAGRIASARASLAAEGQQ---NRSRRRVESRC 118

[Close]

BLAST of MC02g0202 vs. NCBI nr
Match: KGN46948.1 (hypothetical protein Csa_020684 [Cucumis sativus])

HSP 1 Score: 122 bits (305), Expect = 2.65e-33
Identity = 74/102 (72.55%), Postives = 80/102 (78.43%), Query Frame = 0


Query: 1   NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWI 60
           +PA  +  +S  G G EKL    K   GVRERLKRHREEVAGKV VPEKWGKEELLKDWI
Sbjct: 28  SPAGGSTGDSSGGVGAEKL----KGCFGVRERLKRHREEVAGKVMVPEKWGKEELLKDWI 87

Query: 61  DYSAFDRILAAKRIATARASLAAEGRRAANSRPALR-VESRC 101
           DYSAFDRILAA RIA+ARASLAAEG+R  NSR + R VESRC
Sbjct: 88  DYSAFDRILAAGRIASARASLAAEGQR--NSRRSWRRVESRC 123

[Close]

BLAST of MC02g0202 vs. NCBI nr
Match: KAG7010351.1 (60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 114 bits (286), Expect = 3.90e-28
Identity = 69/93 (74.19%), Postives = 70/93 (75.27%), Query Frame = 0


Query: 1   NPASAAAPESHDGS------GVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEE 60
           N   AAAP   DGS      G EK     K  CG RERLKRHREEVAGKVTVPEKWGKEE
Sbjct: 18  NSTPAAAPV--DGSPGDSSGGAEKF----KGCCGFRERLKRHREEVAGKVTVPEKWGKEE 77

Query: 61  LLKDWIDYSAFDRILAAKRIATARASLAAEGRR 87
           LLKDWIDYSAFDRILAA RIA+ARASL AEGRR
Sbjct: 78  LLKDWIDYSAFDRILAAGRIASARASLVAEGRR 104

[Close]

BLAST of MC02g0202 vs. ExPASy TrEMBL
Match: A0A6J1DHR5 (protein BIC2 OS=Momordica charantia OX=3673 GN=LOC111020610 PE=4 SV=1)

HSP 1 Score: 192 bits (489), Expect = 6.95e-62
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 1   NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWI 60
           NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWI
Sbjct: 6   NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWI 65

Query: 61  DYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESRC 101
           DYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESRC
Sbjct: 66  DYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESRC 106

[Close]

BLAST of MC02g0202 vs. ExPASy TrEMBL
Match: A0A5D3D5X1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold28061G00010 PE=4 SV=1)

HSP 1 Score: 125 bits (314), Expect = 4.72e-35
Identity = 73/101 (72.28%), Postives = 80/101 (79.21%), Query Frame = 0


Query: 1   NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWI 60
           +PA A+  +S    G EKL    K  CGVRERLKRHREEVAGKVTVPEKWGKEELLKDWI
Sbjct: 25  SPAGASTGDSSSTVGPEKL----KGCCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWI 84

Query: 61  DYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESRC 101
           DYSAFDRILAA RIA+ARASLAAEG++   +R   RVESRC
Sbjct: 85  DYSAFDRILAAGRIASARASLAAEGQQ---NRSRRRVESRC 118

[Close]

BLAST of MC02g0202 vs. ExPASy TrEMBL
Match: A0A5A7STT7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00580 PE=4 SV=1)

HSP 1 Score: 124 bits (311), Expect = 1.35e-34
Identity = 72/101 (71.29%), Postives = 80/101 (79.21%), Query Frame = 0


Query: 1   NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWI 60
           +PA A+  +S    G EKL    K  CGVRERLKRHREEVAGKVTVP+KWGKEELLKDWI
Sbjct: 25  SPAGASTGDSSSTVGPEKL----KGCCGVRERLKRHREEVAGKVTVPDKWGKEELLKDWI 84

Query: 61  DYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESRC 101
           DYSAFDRILAA RIA+ARASLAAEG++   +R   RVESRC
Sbjct: 85  DYSAFDRILAAGRIASARASLAAEGQQ---NRSRRRVESRC 118

[Close]

BLAST of MC02g0202 vs. ExPASy TrEMBL
Match: A0A1S3C9F3 (uncharacterized protein LOC103497945 OS=Cucumis melo OX=3656 GN=LOC103497945 PE=4 SV=1)

HSP 1 Score: 124 bits (311), Expect = 1.35e-34
Identity = 72/101 (71.29%), Postives = 80/101 (79.21%), Query Frame = 0


Query: 1   NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWI 60
           +PA A+  +S    G EKL    K  CGVRERLKRHREEVAGKVTVP+KWGKEELLKDWI
Sbjct: 25  SPAGASTGDSSSTVGPEKL----KGCCGVRERLKRHREEVAGKVTVPDKWGKEELLKDWI 84

Query: 61  DYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESRC 101
           DYSAFDRILAA RIA+ARASLAAEG++   +R   RVESRC
Sbjct: 85  DYSAFDRILAAGRIASARASLAAEGQQ---NRSRRRVESRC 118

[Close]

BLAST of MC02g0202 vs. ExPASy TrEMBL
Match: A0A0A0KBS7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152340 PE=4 SV=1)

HSP 1 Score: 122 bits (305), Expect = 1.28e-33
Identity = 74/102 (72.55%), Postives = 80/102 (78.43%), Query Frame = 0


Query: 1   NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWI 60
           +PA  +  +S  G G EKL    K   GVRERLKRHREEVAGKV VPEKWGKEELLKDWI
Sbjct: 28  SPAGGSTGDSSGGVGAEKL----KGCFGVRERLKRHREEVAGKVMVPEKWGKEELLKDWI 87

Query: 61  DYSAFDRILAAKRIATARASLAAEGRRAANSRPALR-VESRC 101
           DYSAFDRILAA RIA+ARASLAAEG+R  NSR + R VESRC
Sbjct: 88  DYSAFDRILAAGRIASARASLAAEGQR--NSRRSWRRVESRC 123

[Close]

BLAST of MC02g0202 vs. TAIR 10
Match: AT3G52740.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44450.1); Has 65 Blast hits to 65 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 75.1 bits (183), Expect = 3.6e-14
Identity = 46/102 (45.10%), Postives = 65/102 (63.73%), Query Frame = 0


Query: 3   ASAAAPESHDGSGVEKLLQPSKSSCGV---RERLKRHREEVAGKVTVPEKWGKEELLKDW 62
           AS+ + +  D + +E+  + S+    V   RERLK+HR E+AG+V +PE WG+EELLKDW
Sbjct: 37  ASSVSADKKDLALLEEKPKQSQEEDRVDTGRERLKKHRREIAGRVWIPEIWGQEELLKDW 96

Query: 63  IDYSAFDRILAAKRIATARASLAAEGRRAANSRPALRVESRC 102
           ID S FD  L    I++AR +L  E RRAA++   L   +RC
Sbjct: 97  IDCSTFDTCLVPAGISSARTALVEEARRAASASGGL--HNRC 136

[Close]

BLAST of MC02g0202 vs. TAIR 10
Match: AT3G44450.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52740.1); Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 74.7 bits (182), Expect = 4.7e-14
Identity = 47/105 (44.76%), Postives = 63/105 (60.00%), Query Frame = 0


Query: 1   NPASAAAPESHDGSGVEKLLQPSKSSCGVRERLKRHREEVAGKVTVPEKWGKEELLKDWI 60
           +P S+   ++  G+   K   P  +    R+RLKRHREEVAGKV +P+ WGKE LL  W+
Sbjct: 15  SPGSSHRKQNKTGT---KTCFPETTVLSGRDRLKRHREEVAGKVPIPDSWGKEGLLMGWM 74

Query: 61  DYSAFDRILAAKRIATARASLAAEG---RRAANSRP-ALRVESRC 102
           D+S FD    + +I +ARA+L A+      A  SRP  LRVES C
Sbjct: 75  DFSTFDAAFTSSQIVSARAALMADSGDDAGARGSRPQRLRVESSC 116

The following BLAST results are available for this feature:

BLAST of MC02g0202 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXJ1	5.1e-13	45.10	Protein BIC1 OS=Arabidopsis thaliana OX=3702 GN=BIC1 PE=1 SV=1	[more]
Q9M280	6.6e-13	44.76	Protein BIC2 OS=Arabidopsis thaliana OX=3702 GN=BIC2 PE=1 SV=1	[more]

BLAST of MC02g0202 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153004.1	1.44e-61	100.00	protein BIC2 [Momordica charantia]	[more]
TYK18920.1	9.76e-35	72.28	uncharacterized protein E5676_scaffold28061G00010 [Cucumis melo var. makuwa]	[more]
XP_008458586.1	2.79e-34	71.29	PREDICTED: uncharacterized protein LOC103497945 [Cucumis melo] >KAA0033406.1 unc...	[more]
KGN46948.1	2.65e-33	72.55	hypothetical protein Csa_020684 [Cucumis sativus]	[more]
KAG7010351.1	3.90e-28	74.19	60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of MC02g0202 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DHR5	6.95e-62	100.00	protein BIC2 OS=Momordica charantia OX=3673 GN=LOC111020610 PE=4 SV=1	[more]
A0A5D3D5X1	4.72e-35	72.28	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7STT7	1.35e-34	71.29	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3C9F3	1.35e-34	71.29	uncharacterized protein LOC103497945 OS=Cucumis melo OX=3656 GN=LOC103497945 PE=...	[more]
A0A0A0KBS7	1.28e-33	72.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152340 PE=4 SV=1	[more]

BLAST of MC02g0202 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52740.1	3.6e-14	45.10	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G44450.1	4.7e-14	44.76	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR34207:SF12	SUBFAMILY NOT NAMED	coord: 20..101
IPR040374	Protein BIC	PANTHER	PTHR34207	PROTEIN BIC1	coord: 20..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g0202.1	MC02g0202.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009785	blue light signaling pathway