MC02g0176 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC02g0176
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC02: 1724675 .. 1724938 (+)
RNA-Seq ExpressionMC02g0176
SyntenyMC02g0176
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCTTCTGTTTCCAGCTTCTCACATGGGAAACAAACCGGTGAAGCAACAAGAAGTACAAAGGGAAGAAATCTTCTTGAAGATAGTGCCTCCTTTGGACCAAGCCTATGTTAGGTGGCTTGCTCGGGATCTCGAGAGGATTCATGGCTTCACTCCAAGAAATCCCCGCGCCGTGAAGCCTCCAGATCACTATATAGAGTTCATGCGCTTGAATGGATGGTTGGATGTGAGTTTAGATGACCCAGATCTCGCACATTTATTCAAA

mRNA sequence

GTTCTTCTGTTTCCAGCTTCTCACATGGGAAACAAACCGGTGAAGCAACAAGAAGTACAAAGGGAAGAAATCTTCTTGAAGATAGTGCCTCCTTTGGACCAAGCCTATGTTAGGTGGCTTGCTCGGGATCTCGAGAGGATTCATGGCTTCACTCCAAGAAATCCCCGCGCCGTGAAGCCTCCAGATCACTATATAGAGTTCATGCGCTTGAATGGATGGTTGGATGTGAGTTTAGATGACCCAGATCTCGCACATTTATTCAAA

Coding sequence (CDS)

GTTCTTCTGTTTCCAGCTTCTCACATGGGAAACAAACCGGTGAAGCAACAAGAAGTACAAAGGGAAGAAATCTTCTTGAAGATAGTGCCTCCTTTGGACCAAGCCTATGTTAGGTGGCTTGCTCGGGATCTCGAGAGGATTCATGGCTTCACTCCAAGAAATCCCCGCGCCGTGAAGCCTCCAGATCACTATATAGAGTTCATGCGCTTGAATGGATGGTTGGATGTGAGTTTAGATGACCCAGATCTCGCACATTTATTCAAA

Protein sequence

VLLFPASHMGNKPVKQQEVQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFMRLNGWLDVSLDDPDLAHLFK
Homology
[Close]
BLAST of MC02g0176 vs. NCBI nr
Match: XP_022152955.1 (uncharacterized protein LOC111020571 [Momordica charantia] >XP_022152956.1 uncharacterized protein LOC111020571 [Momordica charantia])

HSP 1 Score: 175 bits (444), Expect = 2.76e-55
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 9  MGNKPVKQQEVQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFM 68
          MGNKPVKQQEVQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFM
Sbjct: 1  MGNKPVKQQEVQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFM 60

Query: 69 RLNGWLDVSLDDPDLAHLFK 88
          RLNGWLDVSLDDPDLAHLFK
Sbjct: 61 RLNGWLDVSLDDPDLAHLFK 80

[Close]
BLAST of MC02g0176 vs. NCBI nr
Match: XP_038901668.1 (uncharacterized protein LOC120088440 [Benincasa hispida] >XP_038901669.1 uncharacterized protein LOC120088440 [Benincasa hispida] >XP_038901671.1 uncharacterized protein LOC120088440 [Benincasa hispida] >XP_038901672.1 uncharacterized protein LOC120088440 [Benincasa hispida])

HSP 1 Score: 161 bits (408), Expect = 8.60e-50
Identity = 73/80 (91.25%), Postives = 76/80 (95.00%), Query Frame = 0 

Query: 9  MGNKPVKQQEVQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFM 68
          MGN+ VKQ + QR EIFLKIVPPLDQAY+RWLARDLERIHGFTPRNPRAVKPPDHYIEFM
Sbjct: 1  MGNRAVKQPQEQRGEIFLKIVPPLDQAYLRWLARDLERIHGFTPRNPRAVKPPDHYIEFM 60

Query: 69 RLNGWLDVSLDDPDLAHLFK 88
          RLNGWLDVSLDDPDLAHLFK
Sbjct: 61 RLNGWLDVSLDDPDLAHLFK 80

[Close]
BLAST of MC02g0176 vs. NCBI nr
Match: XP_021278844.1 (uncharacterized protein LOC110412594 [Herrania umbratica] >EOY33333.1 Uncharacterized protein TCM_041290 isoform 1 [Theobroma cacao] >EOY33334.1 Uncharacterized protein TCM_041290 isoform 1 [Theobroma cacao])

HSP 1 Score: 160 bits (404), Expect = 3.31e-49
Identity = 73/80 (91.25%), Postives = 76/80 (95.00%), Query Frame = 0 

Query: 9  MGNKPVKQQEVQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFM 68
          MGNKPVKQ+  QREEI LKIVPPLDQAYVRWLARD+ERIHGFTPRNPRAVKPPDHYIE+M
Sbjct: 1  MGNKPVKQE--QREEILLKIVPPLDQAYVRWLARDIERIHGFTPRNPRAVKPPDHYIEYM 60

Query: 69 RLNGWLDVSLDDPDLAHLFK 88
          RLNGWLDV LDDPDLAHLFK
Sbjct: 61 RLNGWLDVDLDDPDLAHLFK 78

[Close]
BLAST of MC02g0176 vs. NCBI nr
Match: XP_017982294.1 (PREDICTED: uncharacterized protein LOC18589038 [Theobroma cacao])

HSP 1 Score: 158 bits (399), Expect = 1.92e-48
Identity = 72/80 (90.00%), Postives = 75/80 (93.75%), Query Frame = 0 

Query: 9  MGNKPVKQQEVQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFM 68
          MGNKPVKQ+  QREEI LKIVPPLDQAYVRWLARD+ERIHGFTPRNPRAVKPPDHYIE+M
Sbjct: 1  MGNKPVKQE--QREEILLKIVPPLDQAYVRWLARDIERIHGFTPRNPRAVKPPDHYIEYM 60

Query: 69 RLNGWLDVSLDDPDLAHLFK 88
          RLNGWLDV LDDPDLAHLF 
Sbjct: 61 RLNGWLDVKLDDPDLAHLFN 78

[Close]
BLAST of MC02g0176 vs. NCBI nr
Match: XP_017982977.1 (PREDICTED: uncharacterized protein LOC18590240 [Theobroma cacao])

HSP 1 Score: 157 bits (396), Expect = 5.50e-48
Identity = 72/80 (90.00%), Postives = 75/80 (93.75%), Query Frame = 0 

Query: 9  MGNKPVKQQEVQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFM 68
          MGNKPVKQ+  QREEI LKIVPPLDQAYVRWLA D+ERIHGFTPRNPRAVKPPDHYIE+M
Sbjct: 1  MGNKPVKQE--QREEILLKIVPPLDQAYVRWLAWDIERIHGFTPRNPRAVKPPDHYIEYM 60

Query: 69 RLNGWLDVSLDDPDLAHLFK 88
          RLNGWLDV LDDPDLAHLFK
Sbjct: 61 RLNGWLDVDLDDPDLAHLFK 78

[Close]
BLAST of MC02g0176 vs. ExPASy TrEMBL
Match: A0A6J1DJ99 (uncharacterized protein LOC111020571 OS=Momordica charantia OX=3673 GN=LOC111020571 PE=4 SV=1)

HSP 1 Score: 175 bits (444), Expect = 1.33e-55
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 9  MGNKPVKQQEVQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFM 68
          MGNKPVKQQEVQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFM
Sbjct: 1  MGNKPVKQQEVQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFM 60

Query: 69 RLNGWLDVSLDDPDLAHLFK 88
          RLNGWLDVSLDDPDLAHLFK
Sbjct: 61 RLNGWLDVSLDDPDLAHLFK 80

[Close]
BLAST of MC02g0176 vs. ExPASy TrEMBL
Match: A0A061GZN3 (Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_041290 PE=4 SV=1)

HSP 1 Score: 160 bits (404), Expect = 1.60e-49
Identity = 73/80 (91.25%), Postives = 76/80 (95.00%), Query Frame = 0 

Query: 9  MGNKPVKQQEVQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFM 68
          MGNKPVKQ+  QREEI LKIVPPLDQAYVRWLARD+ERIHGFTPRNPRAVKPPDHYIE+M
Sbjct: 1  MGNKPVKQE--QREEILLKIVPPLDQAYVRWLARDIERIHGFTPRNPRAVKPPDHYIEYM 60

Query: 69 RLNGWLDVSLDDPDLAHLFK 88
          RLNGWLDV LDDPDLAHLFK
Sbjct: 61 RLNGWLDVDLDDPDLAHLFK 78

[Close]
BLAST of MC02g0176 vs. ExPASy TrEMBL
Match: A0A6J0ZWT3 (uncharacterized protein LOC110412594 OS=Herrania umbratica OX=108875 GN=LOC110412594 PE=4 SV=1)

HSP 1 Score: 160 bits (404), Expect = 1.60e-49
Identity = 73/80 (91.25%), Postives = 76/80 (95.00%), Query Frame = 0 

Query: 9  MGNKPVKQQEVQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFM 68
          MGNKPVKQ+  QREEI LKIVPPLDQAYVRWLARD+ERIHGFTPRNPRAVKPPDHYIE+M
Sbjct: 1  MGNKPVKQE--QREEILLKIVPPLDQAYVRWLARDIERIHGFTPRNPRAVKPPDHYIEYM 60

Query: 69 RLNGWLDVSLDDPDLAHLFK 88
          RLNGWLDV LDDPDLAHLFK
Sbjct: 61 RLNGWLDVDLDDPDLAHLFK 78

[Close]
BLAST of MC02g0176 vs. ExPASy TrEMBL
Match: A0A438DCX1 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_085320 PE=4 SV=1)

HSP 1 Score: 156 bits (394), Expect = 5.22e-48
Identity = 70/80 (87.50%), Postives = 77/80 (96.25%), Query Frame = 0 

Query: 9  MGNKPVKQQEVQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFM 68
          MGNKPVK++   +EEIFLKIVPPLD+AYVRWLARDLERIHGFTP+NPRAVKPPDHYIE+M
Sbjct: 1  MGNKPVKEE---KEEIFLKIVPPLDRAYVRWLARDLERIHGFTPKNPRAVKPPDHYIEYM 60

Query: 69 RLNGWLDVSLDDPDLAHLFK 88
          RLNGWLDV+LDDPDLAHLFK
Sbjct: 61 RLNGWLDVNLDDPDLAHLFK 77

[Close]
BLAST of MC02g0176 vs. ExPASy TrEMBL
Match: A0A061GNT1 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_038446 PE=4 SV=1)

HSP 1 Score: 158 bits (399), Expect = 7.09e-48
Identity = 72/80 (90.00%), Postives = 75/80 (93.75%), Query Frame = 0 

Query: 9   MGNKPVKQQEVQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPRNPRAVKPPDHYIEFM 68
           MGNKPVKQ+  QREEI LKIVPPLDQAYVRWLARD+ERIHGFTPRNPRAVKPPDHYIE+M
Sbjct: 67  MGNKPVKQE--QREEILLKIVPPLDQAYVRWLARDIERIHGFTPRNPRAVKPPDHYIEYM 126

Query: 69  RLNGWLDVSLDDPDLAHLFK 88
           RLNGWLDV LDDPDLAHLF 
Sbjct: 127 RLNGWLDVKLDDPDLAHLFN 144

[Close]
BLAST of MC02g0176 vs. TAIR 10
Match: AT5G22210.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 122.9 bits (307), Expect = 1.3e-28
Identity = 58/81 (71.60%), Postives = 67/81 (82.72%), Query Frame = 0 

Query: 9  MGNKPVKQQEVQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPR-NPRAVKPPDHYIEF 68
          MGNK    +E +REEI LKIVPPLD+ ++RWLARDL+R+HGF P+ N RA+ PPD YIEF
Sbjct: 1  MGNKATTVKE-EREEIHLKIVPPLDKVFLRWLARDLQRVHGFKPKNNTRAITPPDSYIEF 60

Query: 69 MRLNGWLDVSLDDPDLAHLFK 89
          MRLNG LDV LDDPDLAHLFK
Sbjct: 61 MRLNGSLDVDLDDPDLAHLFK 80

[Close]
BLAST of MC02g0176 vs. TAIR 10
Match: AT5G22210.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 122.9 bits (307), Expect = 1.3e-28
Identity = 58/81 (71.60%), Postives = 67/81 (82.72%), Query Frame = 0 

Query: 9  MGNKPVKQQEVQREEIFLKIVPPLDQAYVRWLARDLERIHGFTPR-NPRAVKPPDHYIEF 68
          MGNK    +E +REEI LKIVPPLD+ ++RWLARDL+R+HGF P+ N RA+ PPD YIEF
Sbjct: 1  MGNKATTVKE-EREEIHLKIVPPLDKVFLRWLARDLQRVHGFKPKNNTRAITPPDSYIEF 60

Query: 69 MRLNGWLDVSLDDPDLAHLFK 89
          MRLNG LDV LDDPDLAHLFK
Sbjct: 61 MRLNGSLDVDLDDPDLAHLFK 80

The following BLAST results are available for this feature:
BLAST of MC02g0176 vs.
Match NameE-valueIdentityDescription
BLAST of MC02g0176 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022152955.12.76e-55100.00uncharacterized protein LOC111020571 [Momordica charantia] >XP_022152956.1 uncha... [more]
XP_038901668.18.60e-5091.25uncharacterized protein LOC120088440 [Benincasa hispida] >XP_038901669.1 unchara... [more]
XP_021278844.13.31e-4991.25uncharacterized protein LOC110412594 [Herrania umbratica] >EOY33333.1 Uncharacte... [more]
XP_017982294.11.92e-4890.00PREDICTED: uncharacterized protein LOC18589038 [Theobroma cacao][more]
XP_017982977.15.50e-4890.00PREDICTED: uncharacterized protein LOC18590240 [Theobroma cacao][more]
BLAST of MC02g0176 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DJ991.33e-55100.00uncharacterized protein LOC111020571 OS=Momordica charantia OX=3673 GN=LOC111020... [more]
A0A061GZN31.60e-4991.25Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_041290 PE=4 ... [more]
A0A6J0ZWT31.60e-4991.25uncharacterized protein LOC110412594 OS=Herrania umbratica OX=108875 GN=LOC11041... [more]
A0A438DCX15.22e-4887.50Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_085320 PE=4 SV=1[more]
A0A061GNT17.09e-4890.00Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_038446 PE=4 SV=1[more]
BLAST of MC02g0176 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G22210.11.3e-2871.60unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
AT5G22210.21.3e-2871.60unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC02g0176.1MC02g0176.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051301 cell division
biological_process GO:0010020 chloroplast fission
cellular_component GO:0032153 cell division site
cellular_component GO:0009507 chloroplast
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding