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MC02g0109 (gene) Bitter gourd (Dali-11) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCCACTCCCAAACATTACCACTATATCCTTCTTCTCCCACTCTCTCTTCTCTCTCAACACAAATCCAATTTCTCCAAATCCCCAAAAATGGCGTCCACCGCAATCGCAGCCTCCTTCCTCCCCCTCACCGCCAAGCATCCCTCCGCCGCTACCCGGAGAGCCCTAATCGTGGCCAAGGCCTCCGCCGCCGCGAACGACGCGTCCAAGCCCAACTTGGAGATGAATAGGAGTGTGCAGGTGGAGAGCTGGCAGGGGCGGCGGGAGTTGGTGGCGGCCGCCGTGACGGTGGCTGCGGCCACCTTGGCCAAGGCAGCGATGGCGGACGAGCCGAAGCGCGGCAGCGCAGAAGCGAAACAGAAGTATGCTCCGGTGTGCGTCACAATGCCCACTGCGCGCATCTGTCGC CCCACTCCCAAACATTACCACTATATCCTTCTTCTCCCACTCTCTCTTCTCTCTCAACACAAATCCAATTTCTCCAAATCCCCAAAAATGGCGTCCACCGCAATCGCAGCCTCCTTCCTCCCCCTCACCGCCAAGCATCCCTCCGCCGCTACCCGGAGAGCCCTAATCGTGGCCAAGGCCTCCGCCGCCGCGAACGACGCGTCCAAGCCCAACTTGGAGATGAATAGGAGTGTGCAGGTGGAGAGCTGGCAGGGGCGGCGGGAGTTGGTGGCGGCCGCCGTGACGGTGGCTGCGGCCACCTTGGCCAAGGCAGCGATGGCGGACGAGCCGAAGCGCGGCAGCGCAGAAGCGAAACAGAAGTATGCTCCGGTGTGCGTCACAATGCCCACTGCGCGCATCTGTCGC CCCACTCCCAAACATTACCACTATATCCTTCTTCTCCCACTCTCTCTTCTCTCTCAACACAAATCCAATTTCTCCAAATCCCCAAAAATGGCGTCCACCGCAATCGCAGCCTCCTTCCTCCCCCTCACCGCCAAGCATCCCTCCGCCGCTACCCGGAGAGCCCTAATCGTGGCCAAGGCCTCCGCCGCCGCGAACGACGCGTCCAAGCCCAACTTGGAGATGAATAGGAGTGTGCAGGTGGAGAGCTGGCAGGGGCGGCGGGAGTTGGTGGCGGCCGCCGTGACGGTGGCTGCGGCCACCTTGGCCAAGGCAGCGATGGCGGACGAGCCGAAGCGCGGCAGCGCAGAAGCGAAACAGAAGTATGCTCCGGTGTGCGTCACAATGCCCACTGCGCGCATCTGTCGC PTPKHYHYILLLPLSLLSQHKSNFSKSPKMASTAIAASFLPLTAKHPSAATRRALIVAKASAAANDASKPNLEMNRSVQVESWQGRRELVAAAVTVAAATLAKAAMADEPKRGSAEAKQKYAPVCVTMPTARICR Homology
BLAST of MC02g0109 vs. ExPASy Swiss-Prot
Match: Q39195 (Photosystem II 5 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSBT PE=3 SV=2) HSP 1 Score: 75.1 bits (183), Expect = 6.8e-13 Identity = 53/108 (49.07%), Postives = 67/108 (62.04%), Query Frame = 0
BLAST of MC02g0109 vs. ExPASy Swiss-Prot
Match: P31336 (Photosystem II 5 kDa protein, chloroplastic OS=Gossypium hirsutum OX=3635 GN=PSBT PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 2.6e-12 Identity = 53/108 (49.07%), Postives = 66/108 (61.11%), Query Frame = 0
BLAST of MC02g0109 vs. ExPASy Swiss-Prot
Match: B3EWI4 (Photosystem II 5 kDa protein, chloroplastic OS=Petunia hybrida OX=4102 PE=1 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.2e-09 Identity = 48/110 (43.64%), Postives = 70/110 (63.64%), Query Frame = 0
BLAST of MC02g0109 vs. NCBI nr
Match: XP_022148791.1 (photosystem II 5 kDa protein, chloroplastic [Momordica charantia]) HSP 1 Score: 192 bits (488), Expect = 8.37e-61 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of MC02g0109 vs. NCBI nr
Match: XP_008449703.1 (PREDICTED: photosystem II 5 kDa protein, chloroplastic [Cucumis melo] >KAA0041421.1 photosystem II 5 kDa protein [Cucumis melo var. makuwa] >TYJ96132.1 photosystem II 5 kDa protein [Cucumis melo var. makuwa]) HSP 1 Score: 142 bits (359), Expect = 1.76e-40 Identity = 95/140 (67.86%), Postives = 107/140 (76.43%), Query Frame = 0
BLAST of MC02g0109 vs. NCBI nr
Match: XP_038901593.1 (photosystem II 5 kDa protein, chloroplastic [Benincasa hispida]) HSP 1 Score: 134 bits (338), Expect = 5.64e-38 Identity = 82/107 (76.64%), Postives = 92/107 (85.98%), Query Frame = 0
BLAST of MC02g0109 vs. NCBI nr
Match: XP_004143237.1 (photosystem II 5 kDa protein, chloroplastic [Cucumis sativus]) HSP 1 Score: 132 bits (331), Expect = 6.54e-37 Identity = 81/107 (75.70%), Postives = 90/107 (84.11%), Query Frame = 0
BLAST of MC02g0109 vs. NCBI nr
Match: XP_022944588.1 (photosystem II 5 kDa protein, chloroplastic [Cucurbita moschata] >XP_022986667.1 photosystem II 5 kDa protein, chloroplastic [Cucurbita maxima]) HSP 1 Score: 130 bits (328), Expect = 2.11e-36 Identity = 84/110 (76.36%), Postives = 91/110 (82.73%), Query Frame = 0
BLAST of MC02g0109 vs. ExPASy TrEMBL
Match: A0A6J1D6G0 (photosystem II 5 kDa protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111017359 PE=4 SV=1) HSP 1 Score: 192 bits (488), Expect = 4.05e-61 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of MC02g0109 vs. ExPASy TrEMBL
Match: A0A5A7TID9 (Photosystem II 5 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00980 PE=4 SV=1) HSP 1 Score: 142 bits (359), Expect = 8.53e-41 Identity = 95/140 (67.86%), Postives = 107/140 (76.43%), Query Frame = 0
BLAST of MC02g0109 vs. ExPASy TrEMBL
Match: A0A1S3BML8 (photosystem II 5 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491503 PE=4 SV=1) HSP 1 Score: 142 bits (359), Expect = 8.53e-41 Identity = 95/140 (67.86%), Postives = 107/140 (76.43%), Query Frame = 0
BLAST of MC02g0109 vs. ExPASy TrEMBL
Match: A0A0A0KIB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G439930 PE=4 SV=1) HSP 1 Score: 132 bits (331), Expect = 3.17e-37 Identity = 81/107 (75.70%), Postives = 90/107 (84.11%), Query Frame = 0
BLAST of MC02g0109 vs. ExPASy TrEMBL
Match: A0A6J1J874 (photosystem II 5 kDa protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111484352 PE=4 SV=1) HSP 1 Score: 130 bits (328), Expect = 1.02e-36 Identity = 84/110 (76.36%), Postives = 91/110 (82.73%), Query Frame = 0
BLAST of MC02g0109 vs. TAIR 10
Match: AT1G51400.1 (Photosystem II 5 kD protein ) HSP 1 Score: 82.4 bits (202), Expect = 3.0e-16 Identity = 55/110 (50.00%), Postives = 72/110 (65.45%), Query Frame = 0
BLAST of MC02g0109 vs. TAIR 10
Match: AT3G21055.1 (photosystem II subunit T ) HSP 1 Score: 75.1 bits (183), Expect = 4.8e-14 Identity = 53/108 (49.07%), Postives = 67/108 (62.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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