MC02g0104 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g0104
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	heterogeneous nuclear ribonucleoprotein F
Location	MC02: 1097758 .. 1098522 (+)
RNA-Seq Expression	MC02g0104
Synteny	MC02g0104

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTCATACGTTGATGGTGGCAATGGTCGTGAAATGGGTGCAAAGCGGCAACGGATAGTTGATCAGGGATCTTCTTATTACGGGACTTCTCCTGGTTCTGGTTTTATGTATAATACAAGTCCCTATGCATACGTTAGTCAGCCACCACCGTTTCCTGTTGTCAGACTTCGAGGTCTTCCTTTCGATTGCATGGAAACTGATGTTGCTGAGTTCTTTCATGGTCTGGACATAGTTGACATTGTTTTTGTGCACAAGAATGGTAAATTCACAGGGGAAGGTTTTTGTGTTTTGGGTTACCCTCTGCAGGTTGATTTTGCCCTTCAGAGAAATAGGCAAAACATGGGCAGGAGATATGTTGAGATTTTCAGGAGTAATCGGCAGGAATACTACAAGGCTTTAGCAAATGAAGTATTCGATGCCCGGGGTGGTTCACCAAGAAGAACTGCACCCAGCTGGTCGAAGCCAAACAACGAGGTGAAAGACTCTGCTGAACACACGGGTGTACTACGATTGAGGGGACTGCCATATTCGGCTGGCAAGGATGACATACTGGACTTCTTCAAAGGTTTTAACTTATCGGAGGACTTGATTCATTTAACACTGAATTCAGAGGGGAGGCCAAGTGGGGAGGCATTCGTCGAGTTCGCCAACGTGCAAGACTCGAAAGCAGCCATGGCCAAGGACAGAATGACGCTAGGTAGTCGATACATAGAGCTGTTCCCATCATCACAGGAAGAGCTCGACGAAGCAATCTCTAGAGGGCGG

mRNA sequence

AGTTCATACGTTGATGGTGGCAATGGTCGTGAAATGGGTGCAAAGCGGCAACGGATAGTTGATCAGGGATCTTCTTATTACGGGACTTCTCCTGGTTCTGGTTTTATGTATAATACAAGTCCCTATGCATACGTTAGTCAGCCACCACCGTTTCCTGTTGTCAGACTTCGAGGTCTTCCTTTCGATTGCATGGAAACTGATGTTGCTGAGTTCTTTCATGGTCTGGACATAGTTGACATTGTTTTTGTGCACAAGAATGGTAAATTCACAGGGGAAGGTTTTTGTGTTTTGGGTTACCCTCTGCAGGTTGATTTTGCCCTTCAGAGAAATAGGCAAAACATGGGCAGGAGATATGTTGAGATTTTCAGGAGTAATCGGCAGGAATACTACAAGGCTTTAGCAAATGAAGTATTCGATGCCCGGGGTGGTTCACCAAGAAGAACTGCACCCAGCTGGTCGAAGCCAAACAACGAGGTGAAAGACTCTGCTGAACACACGGGTGTACTACGATTGAGGGGACTGCCATATTCGGCTGGCAAGGATGACATACTGGACTTCTTCAAAGGTTTTAACTTATCGGAGGACTTGATTCATTTAACACTGAATTCAGAGGGGAGGCCAAGTGGGGAGGCATTCGTCGAGTTCGCCAACGTGCAAGACTCGAAAGCAGCCATGGCCAAGGACAGAATGACGCTAGGTAGTCGATACATAGAGCTGTTCCCATCATCACAGGAAGAGCTCGACGAAGCAATCTCTAGAGGGCGG

Coding sequence (CDS)

AGTTCATACGTTGATGGTGGCAATGGTCGTGAAATGGGTGCAAAGCGGCAACGGATAGTTGATCAGGGATCTTCTTATTACGGGACTTCTCCTGGTTCTGGTTTTATGTATAATACAAGTCCCTATGCATACGTTAGTCAGCCACCACCGTTTCCTGTTGTCAGACTTCGAGGTCTTCCTTTCGATTGCATGGAAACTGATGTTGCTGAGTTCTTTCATGGTCTGGACATAGTTGACATTGTTTTTGTGCACAAGAATGGTAAATTCACAGGGGAAGGTTTTTGTGTTTTGGGTTACCCTCTGCAGGTTGATTTTGCCCTTCAGAGAAATAGGCAAAACATGGGCAGGAGATATGTTGAGATTTTCAGGAGTAATCGGCAGGAATACTACAAGGCTTTAGCAAATGAAGTATTCGATGCCCGGGGTGGTTCACCAAGAAGAACTGCACCCAGCTGGTCGAAGCCAAACAACGAGGTGAAAGACTCTGCTGAACACACGGGTGTACTACGATTGAGGGGACTGCCATATTCGGCTGGCAAGGATGACATACTGGACTTCTTCAAAGGTTTTAACTTATCGGAGGACTTGATTCATTTAACACTGAATTCAGAGGGGAGGCCAAGTGGGGAGGCATTCGTCGAGTTCGCCAACGTGCAAGACTCGAAAGCAGCCATGGCCAAGGACAGAATGACGCTAGGTAGTCGATACATAGAGCTGTTCCCATCATCACAGGAAGAGCTCGACGAAGCAATCTCTAGAGGGCGG

Protein sequence

SSYVDGGNGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR

Homology

[Close]

BLAST of MC02g0104 vs. ExPASy Swiss-Prot
Match: P52597 (Heterogeneous nuclear ribonucleoprotein F OS=Homo sapiens OX=9606 GN=HNRNPF PE=1 SV=3)

HSP 1 Score: 126.3 bits (316), Expect = 4.9e-28
Identity = 76/200 (38.00%), Postives = 117/200 (58.50%), Query Frame = 0


Query: 53  VVRLRGLPFDCMETDVAEFFHGLDIVD----IVFVH-KNGKFTGEGFCVLGYPLQVDFAL 112
           VV+LRGLP+ C   DV  F     I D    + F++ + G+ +GE F  LG    V  AL
Sbjct: 12  VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMAL 71

Query: 113 QRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTG 172
           +++R++MG RY+E+F+S+R E    L +                 S PN+   DSA + G
Sbjct: 72  KKDRESMGHRYIEVFKSHRTEMDWVLKH-----------------SGPNS--ADSA-NDG 131

Query: 173 VLRLRGLPYSAGKDDILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAK 232
            +RLRGLP+   K++I+ FF G  +  + I L ++ EG+ +GEAFV+FA+ + ++ A+ K
Sbjct: 132 FVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGK 191

Query: 233 DRMTLGSRYIELFPSSQEEL 248
            +  +G RYIE+F SSQEE+
Sbjct: 192 HKERIGHRYIEVFKSSQEEV 191

[Close]

BLAST of MC02g0104 vs. ExPASy Swiss-Prot
Match: Q60HC3 (Heterogeneous nuclear ribonucleoprotein F OS=Macaca fascicularis OX=9541 GN=HNRNPF PE=2 SV=3)

HSP 1 Score: 126.3 bits (316), Expect = 4.9e-28
Identity = 76/200 (38.00%), Postives = 117/200 (58.50%), Query Frame = 0


Query: 53  VVRLRGLPFDCMETDVAEFFHGLDIVD----IVFVH-KNGKFTGEGFCVLGYPLQVDFAL 112
           VV+LRGLP+ C   DV  F     I D    + F++ + G+ +GE F  LG    V  AL
Sbjct: 12  VVKLRGLPWSCSVEDVQNFLSDCTIHDGAAGVHFIYTREGRQSGEAFVELGSEDDVKMAL 71

Query: 113 QRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTG 172
           +++R++MG RY+E+F+S+R E    L +                 S PN+   DSA + G
Sbjct: 72  KKDRESMGHRYIEVFKSHRTEMDWVLKH-----------------SGPNS--ADSA-NDG 131

Query: 173 VLRLRGLPYSAGKDDILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAK 232
            +RLRGLP+   K++I+ FF G  +  + I L ++ EG+ +GEAFV+FA+ + ++ A+ K
Sbjct: 132 FVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGK 191

Query: 233 DRMTLGSRYIELFPSSQEEL 248
            +  +G RYIE+F SSQEE+
Sbjct: 192 HKERIGHRYIEVFKSSQEEV 191

[Close]

BLAST of MC02g0104 vs. ExPASy Swiss-Prot
Match: Q9Z2X1 (Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf PE=1 SV=3)

HSP 1 Score: 123.2 bits (308), Expect = 4.1e-27
Identity = 76/200 (38.00%), Postives = 115/200 (57.50%), Query Frame = 0


Query: 53  VVRLRGLPFDCMETDVAEFFHGLDIVD-IVFVH----KNGKFTGEGFCVLGYPLQVDFAL 112
           VV+LRGLP+ C   DV  F     I D +  VH    + G+ +GE F  L     V  AL
Sbjct: 12  VVKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLAL 71

Query: 113 QRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTG 172
           +++R++MG RY+E+F+S+R E    L +                 S PN+   DSA + G
Sbjct: 72  KKDRESMGHRYIEVFKSHRTEMDWVLKH-----------------SGPNS--ADSA-NDG 131

Query: 173 VLRLRGLPYSAGKDDILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAK 232
            +RLRGLP+   K++I+ FF G  +  + I L ++ EG+ +GEAFV+FA+ + ++ A+ K
Sbjct: 132 FVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGK 191

Query: 233 DRMTLGSRYIELFPSSQEEL 248
            +  +G RYIE+F SSQEE+
Sbjct: 192 HKERIGHRYIEVFKSSQEEV 191

[Close]

BLAST of MC02g0104 vs. ExPASy Swiss-Prot
Match: Q794E4 (Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnpf PE=1 SV=3)

HSP 1 Score: 123.2 bits (308), Expect = 4.1e-27
Identity = 76/200 (38.00%), Postives = 115/200 (57.50%), Query Frame = 0


Query: 53  VVRLRGLPFDCMETDVAEFFHGLDIVD-IVFVH----KNGKFTGEGFCVLGYPLQVDFAL 112
           VV+LRGLP+ C   DV  F     I D +  VH    + G+ +GE F  L     V  AL
Sbjct: 12  VVKLRGLPWSCSIEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLAL 71

Query: 113 QRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTG 172
           +++R++MG RY+E+F+S+R E    L +                 S PN+   DSA + G
Sbjct: 72  KKDRESMGHRYIEVFKSHRTEMDWVLKH-----------------SGPNS--ADSA-NDG 131

Query: 173 VLRLRGLPYSAGKDDILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAK 232
            +RLRGLP+   K++I+ FF G  +  + I L ++ EG+ +GEAFV+FA+ + ++ A+ K
Sbjct: 132 FVRLRGLPFGCTKEEIVQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGK 191

Query: 233 DRMTLGSRYIELFPSSQEEL 248
            +  +G RYIE+F SSQEE+
Sbjct: 192 HKERIGHRYIEVFKSSQEEV 191

[Close]

BLAST of MC02g0104 vs. ExPASy Swiss-Prot
Match: Q5E9J1 (Heterogeneous nuclear ribonucleoprotein F OS=Bos taurus OX=9913 GN=HNRNPF PE=2 SV=3)

HSP 1 Score: 122.9 bits (307), Expect = 5.4e-27
Identity = 75/200 (37.50%), Postives = 115/200 (57.50%), Query Frame = 0


Query: 53  VVRLRGLPFDCMETDVAEFFHGLDIVD-IVFVH----KNGKFTGEGFCVLGYPLQVDFAL 112
           VV+LRGLP+ C   DV  F     I D +  VH    + G+ +GE F  L     V  AL
Sbjct: 12  VVKLRGLPWSCSVEDVQNFLSDCTIHDGVAGVHFIYTREGRQSGEAFVELESEDDVKLAL 71

Query: 113 QRNRQNMGRRYVEIFRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTG 172
           +++R++MG RY+E+F+S+R E    L +                 S PN+   D+A + G
Sbjct: 72  KKDRESMGHRYIEVFKSHRTEMDWVLKH-----------------SGPNS--ADTA-NDG 131

Query: 173 VLRLRGLPYSAGKDDILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAK 232
            +RLRGLP+   K++I+ FF G  +  + I L ++ EG+ +GEAFV+FA+ + ++ A+ K
Sbjct: 132 FVRLRGLPFGCTKEEIIQFFSGLEIVPNGITLPVDPEGKITGEAFVQFASQELAEKALGK 191

Query: 233 DRMTLGSRYIELFPSSQEEL 248
            +  +G RYIE+F SSQEE+
Sbjct: 192 HKERIGHRYIEVFKSSQEEV 191

[Close]

BLAST of MC02g0104 vs. NCBI nr
Match: XP_022148687.1 (heterogeneous nuclear ribonucleoprotein F [Momordica charantia])

HSP 1 Score: 522 bits (1345), Expect = 4.78e-187
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0


Query: 2   SYVDGGNGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPF 61
           SYVDGGNGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPF
Sbjct: 6   SYVDGGNGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPF 65

Query: 62  DCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI 121
           DCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI
Sbjct: 66  DCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI 125

Query: 122 FRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKD 181
           FRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKD
Sbjct: 126 FRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKD 185

Query: 182 DILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFP 241
           DILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFP
Sbjct: 186 DILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFP 245

Query: 242 SSQEELDEAISRGR 255
           SSQEELDEAISRGR
Sbjct: 246 SSQEELDEAISRGR 259

[Close]

BLAST of MC02g0104 vs. NCBI nr
Match: XP_004142112.1 (heterogeneous nuclear ribonucleoprotein F [Cucumis sativus] >XP_008449713.1 PREDICTED: heterogeneous nuclear ribonucleoprotein F [Cucumis melo] >KGN54181.1 hypothetical protein Csa_018007 [Cucumis sativus])

HSP 1 Score: 486 bits (1252), Expect = 7.48e-173
Identity = 238/254 (93.70%), Postives = 246/254 (96.85%), Query Frame = 0


Query: 2   SYVDGGNGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPF 61
           SY DGG+GREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYV+QPPPFPVVRLRGLPF
Sbjct: 8   SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPF 67

Query: 62  DCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI 121
           DCMETDV EFFHGLDIVDI+FVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI
Sbjct: 68  DCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI 127

Query: 122 FRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKD 181
           FRSNRQEYYKA+ANEVFDARGGSPRR+AP  SK N+EVKDSAEHTGVLRLRGLPYSAGKD
Sbjct: 128 FRSNRQEYYKAVANEVFDARGGSPRRSAPR-SKLNDEVKDSAEHTGVLRLRGLPYSAGKD 187

Query: 182 DILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFP 241
           DILDFFKGFNLSED IHLTLNSEGRPSGEAFVEF+N QDSKAAM+KDRMTLGSRYIELFP
Sbjct: 188 DILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFP 247

Query: 242 SSQEELDEAISRGR 255
           SS EELDEAISRGR
Sbjct: 248 SSHEELDEAISRGR 260

[Close]

BLAST of MC02g0104 vs. NCBI nr
Match: KAA0041416.1 (heterogeneous nuclear ribonucleoprotein H isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 486 bits (1252), Expect = 4.62e-172
Identity = 238/254 (93.70%), Postives = 246/254 (96.85%), Query Frame = 0


Query: 2   SYVDGGNGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPF 61
           SY DGG+GREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYV+QPPPFPVVRLRGLPF
Sbjct: 58  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPF 117

Query: 62  DCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI 121
           DCMETDV EFFHGLDIVDI+FVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI
Sbjct: 118 DCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI 177

Query: 122 FRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKD 181
           FRSNRQEYYKA+ANEVFDARGGSPRR+AP  SK N+EVKDSAEHTGVLRLRGLPYSAGKD
Sbjct: 178 FRSNRQEYYKAVANEVFDARGGSPRRSAPR-SKLNDEVKDSAEHTGVLRLRGLPYSAGKD 237

Query: 182 DILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFP 241
           DILDFFKGFNLSED IHLTLNSEGRPSGEAFVEF+N QDSKAAM+KDRMTLGSRYIELFP
Sbjct: 238 DILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFP 297

Query: 242 SSQEELDEAISRGR 255
           SS EELDEAISRGR
Sbjct: 298 SSHEELDEAISRGR 310

[Close]

BLAST of MC02g0104 vs. NCBI nr
Match: TYJ96136.1 (heterogeneous nuclear ribonucleoprotein H isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 486 bits (1252), Expect = 2.02e-171
Identity = 238/254 (93.70%), Postives = 246/254 (96.85%), Query Frame = 0


Query: 2   SYVDGGNGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPF 61
           SY DGG+GREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYV+QPPPFPVVRLRGLPF
Sbjct: 99  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPF 158

Query: 62  DCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI 121
           DCMETDV EFFHGLDIVDI+FVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI
Sbjct: 159 DCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI 218

Query: 122 FRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKD 181
           FRSNRQEYYKA+ANEVFDARGGSPRR+AP  SK N+EVKDSAEHTGVLRLRGLPYSAGKD
Sbjct: 219 FRSNRQEYYKAVANEVFDARGGSPRRSAPR-SKLNDEVKDSAEHTGVLRLRGLPYSAGKD 278

Query: 182 DILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFP 241
           DILDFFKGFNLSED IHLTLNSEGRPSGEAFVEF+N QDSKAAM+KDRMTLGSRYIELFP
Sbjct: 279 DILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFP 338

Query: 242 SSQEELDEAISRGR 255
           SS EELDEAISRGR
Sbjct: 339 SSHEELDEAISRGR 351

[Close]

BLAST of MC02g0104 vs. NCBI nr
Match: XP_038901811.1 (heterogeneous nuclear ribonucleoprotein F isoform X1 [Benincasa hispida])

HSP 1 Score: 483 bits (1242), Expect = 2.50e-171
Identity = 236/254 (92.91%), Postives = 244/254 (96.06%), Query Frame = 0


Query: 2   SYVDGGNGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPF 61
           SY DGG+GREMGAKRQRIVDQGSSYYGT PGSGFMYNTSPYAYV+QPPPFPVVRLRGLPF
Sbjct: 8   SYADGGDGREMGAKRQRIVDQGSSYYGTPPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPF 67

Query: 62  DCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI 121
           DCMETDV EFFHGLDIVDI+FVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI
Sbjct: 68  DCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI 127

Query: 122 FRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKD 181
           FRSNRQEYYKA+ANEVFDARGGSPRR+AP  SK N+EVKD AEHTGVLRLRGLPYSAGKD
Sbjct: 128 FRSNRQEYYKAVANEVFDARGGSPRRSAPR-SKLNDEVKDCAEHTGVLRLRGLPYSAGKD 187

Query: 182 DILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFP 241
           DILDFFKGFNLSED IHLTLNSEGRPSGEAFVEF+N QDSKAAM+KDRMTLGSRYIELFP
Sbjct: 188 DILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFP 247

Query: 242 SSQEELDEAISRGR 255
           SS EELDEAISRGR
Sbjct: 248 SSHEELDEAISRGR 260

[Close]

BLAST of MC02g0104 vs. ExPASy TrEMBL
Match: A0A6J1D5R6 (heterogeneous nuclear ribonucleoprotein F OS=Momordica charantia OX=3673 GN=LOC111017289 PE=4 SV=1)

HSP 1 Score: 522 bits (1345), Expect = 2.32e-187
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0


Query: 2   SYVDGGNGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPF 61
           SYVDGGNGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPF
Sbjct: 6   SYVDGGNGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPF 65

Query: 62  DCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI 121
           DCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI
Sbjct: 66  DCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI 125

Query: 122 FRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKD 181
           FRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKD
Sbjct: 126 FRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKD 185

Query: 182 DILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFP 241
           DILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFP
Sbjct: 186 DILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFP 245

Query: 242 SSQEELDEAISRGR 255
           SSQEELDEAISRGR
Sbjct: 246 SSQEELDEAISRGR 259

[Close]

BLAST of MC02g0104 vs. ExPASy TrEMBL
Match: A0A0A0L205 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G291930 PE=4 SV=1)

HSP 1 Score: 486 bits (1252), Expect = 3.62e-173
Identity = 238/254 (93.70%), Postives = 246/254 (96.85%), Query Frame = 0


Query: 2   SYVDGGNGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPF 61
           SY DGG+GREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYV+QPPPFPVVRLRGLPF
Sbjct: 8   SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPF 67

Query: 62  DCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI 121
           DCMETDV EFFHGLDIVDI+FVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI
Sbjct: 68  DCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI 127

Query: 122 FRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKD 181
           FRSNRQEYYKA+ANEVFDARGGSPRR+AP  SK N+EVKDSAEHTGVLRLRGLPYSAGKD
Sbjct: 128 FRSNRQEYYKAVANEVFDARGGSPRRSAPR-SKLNDEVKDSAEHTGVLRLRGLPYSAGKD 187

Query: 182 DILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFP 241
           DILDFFKGFNLSED IHLTLNSEGRPSGEAFVEF+N QDSKAAM+KDRMTLGSRYIELFP
Sbjct: 188 DILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFP 247

Query: 242 SSQEELDEAISRGR 255
           SS EELDEAISRGR
Sbjct: 248 SSHEELDEAISRGR 260

[Close]

BLAST of MC02g0104 vs. ExPASy TrEMBL
Match: A0A1S3BMM3 (heterogeneous nuclear ribonucleoprotein F OS=Cucumis melo OX=3656 GN=LOC103491509 PE=4 SV=1)

HSP 1 Score: 486 bits (1252), Expect = 3.62e-173
Identity = 238/254 (93.70%), Postives = 246/254 (96.85%), Query Frame = 0


Query: 2   SYVDGGNGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPF 61
           SY DGG+GREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYV+QPPPFPVVRLRGLPF
Sbjct: 8   SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPF 67

Query: 62  DCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI 121
           DCMETDV EFFHGLDIVDI+FVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI
Sbjct: 68  DCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI 127

Query: 122 FRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKD 181
           FRSNRQEYYKA+ANEVFDARGGSPRR+AP  SK N+EVKDSAEHTGVLRLRGLPYSAGKD
Sbjct: 128 FRSNRQEYYKAVANEVFDARGGSPRRSAPR-SKLNDEVKDSAEHTGVLRLRGLPYSAGKD 187

Query: 182 DILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFP 241
           DILDFFKGFNLSED IHLTLNSEGRPSGEAFVEF+N QDSKAAM+KDRMTLGSRYIELFP
Sbjct: 188 DILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFP 247

Query: 242 SSQEELDEAISRGR 255
           SS EELDEAISRGR
Sbjct: 248 SSHEELDEAISRGR 260

[Close]

BLAST of MC02g0104 vs. ExPASy TrEMBL
Match: A0A5A7TH86 (Heterogeneous nuclear ribonucleoprotein H isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00630 PE=4 SV=1)

HSP 1 Score: 486 bits (1252), Expect = 2.23e-172
Identity = 238/254 (93.70%), Postives = 246/254 (96.85%), Query Frame = 0


Query: 2   SYVDGGNGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPF 61
           SY DGG+GREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYV+QPPPFPVVRLRGLPF
Sbjct: 58  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPF 117

Query: 62  DCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI 121
           DCMETDV EFFHGLDIVDI+FVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI
Sbjct: 118 DCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI 177

Query: 122 FRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKD 181
           FRSNRQEYYKA+ANEVFDARGGSPRR+AP  SK N+EVKDSAEHTGVLRLRGLPYSAGKD
Sbjct: 178 FRSNRQEYYKAVANEVFDARGGSPRRSAPR-SKLNDEVKDSAEHTGVLRLRGLPYSAGKD 237

Query: 182 DILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFP 241
           DILDFFKGFNLSED IHLTLNSEGRPSGEAFVEF+N QDSKAAM+KDRMTLGSRYIELFP
Sbjct: 238 DILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFP 297

Query: 242 SSQEELDEAISRGR 255
           SS EELDEAISRGR
Sbjct: 298 SSHEELDEAISRGR 310

[Close]

BLAST of MC02g0104 vs. ExPASy TrEMBL
Match: A0A5D3BB71 (Heterogeneous nuclear ribonucleoprotein H isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G001040 PE=4 SV=1)

HSP 1 Score: 486 bits (1252), Expect = 9.78e-172
Identity = 238/254 (93.70%), Postives = 246/254 (96.85%), Query Frame = 0


Query: 2   SYVDGGNGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPF 61
           SY DGG+GREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYV+QPPPFPVVRLRGLPF
Sbjct: 99  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVNQPPPFPVVRLRGLPF 158

Query: 62  DCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI 121
           DCMETDV EFFHGLDIVDI+FVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI
Sbjct: 159 DCMETDVVEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEI 218

Query: 122 FRSNRQEYYKALANEVFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKD 181
           FRSNRQEYYKA+ANEVFDARGGSPRR+AP  SK N+EVKDSAEHTGVLRLRGLPYSAGKD
Sbjct: 219 FRSNRQEYYKAVANEVFDARGGSPRRSAPR-SKLNDEVKDSAEHTGVLRLRGLPYSAGKD 278

Query: 182 DILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFP 241
           DILDFFKGFNLSED IHLTLNSEGRPSGEAFVEF+N QDSKAAM+KDRMTLGSRYIELFP
Sbjct: 279 DILDFFKGFNLSEDSIHLTLNSEGRPSGEAFVEFSNEQDSKAAMSKDRMTLGSRYIELFP 338

Query: 242 SSQEELDEAISRGR 255
           SS EELDEAISRGR
Sbjct: 339 SSHEELDEAISRGR 351

[Close]

BLAST of MC02g0104 vs. TAIR 10
Match: AT3G20890.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 356.3 bits (913), Expect = 2.1e-98
Identity = 179/289 (61.94%), Postives = 212/289 (73.36%), Query Frame = 0


Query: 3   YVDGGNGREMGAKRQRIVDQG--SSYYGTSPGSGFMYNTSPYAYVS--QPPPFPVVRLRG 62
           Y DG +GREMG KRQR++DQG    +YG  P SGFMYN  PY +V+   PPPFP VRLRG
Sbjct: 6   YGDGPDGREMGPKRQRMIDQGPPGPFYGPHPSSGFMYN--PYGFVAPPPPPPFPAVRLRG 65

Query: 63  LPFDCMETDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRY 122
           LPFDC E DV EFFHGLD+VD++FVH+N K TGE FCVLGYPLQVDFALQ+NRQNMGRRY
Sbjct: 66  LPFDCAELDVVEFFHGLDVVDVLFVHRNNKVTGEAFCVLGYPLQVDFALQKNRQNMGRRY 125

Query: 123 VEIFRSNRQEYYKALANEVFDAR--------------------------------GGSPR 182
           VE+FRS +QEYYKA+ANEV ++R                                GGS  
Sbjct: 126 VEVFRSTKQEYYKAIANEVAESRVHGMASGGGGGLGGGNGSGGGGGGGGGGGRISGGSSP 185

Query: 183 RTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHLTLNSEGR 242
           R     ++ +++ K+  EHTG+LRLRGLP+SAGK+DILDFFK F LSED +H+T+N EGR
Sbjct: 186 RRHVQRARSSDDGKEDIEHTGILRLRGLPFSAGKEDILDFFKDFELSEDFVHVTVNGEGR 245

Query: 243 PSGEAFVEFANVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR 256
           P+GEAFVEF N +DS+AAM KDR TLGSRYIELFPSS EEL+EA+SRGR
Sbjct: 246 PTGEAFVEFRNAEDSRAAMVKDRKTLGSRYIELFPSSVEELEEALSRGR 292

[Close]

BLAST of MC02g0104 vs. TAIR 10
Match: AT5G66010.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 228.0 bits (580), Expect = 8.4e-60
Identity = 122/256 (47.66%), Postives = 173/256 (67.58%), Query Frame = 0


Query: 6   GGNGREMGAKRQRIVDQGSSY--YGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPFDC 65
           G  G E+G+KRQR++ Q + Y   GT P S       P+ Y      FPVVRLRGLPF+C
Sbjct: 10  GSGGYEVGSKRQRMM-QSNPYLAVGTGPTS-----FPPFGYAG---GFPVVRLRGLPFNC 69

Query: 66  METDVAEFFHGLDIVDIVFVHKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFR 125
            + D+ EFF GL+IVD++ V KNGKF+GE F V   P+QV+ ALQR+R NMGRRYVE+FR
Sbjct: 70  ADIDIFEFFAGLNIVDVLLVSKNGKFSGEAFVVFAGPMQVEIALQRDRHNMGRRYVEVFR 129

Query: 126 SNRQEYYKALANE----VFDARGGSPRRTAPSWSKPNNEVKDSAEHTGVLRLRGLPYSAG 185
            ++Q+YY A+A E     ++ R  SP  T PS +K  +E K+  E+T VL++RGLPYS  
Sbjct: 130 CSKQDYYNAVAAEEGAYEYEVR-ASPPPTGPSRAKRFSE-KEKLEYTEVLKMRGLPYSVN 189

Query: 186 KDDILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFANVQDSKAAMAKDRMTLGSRYIEL 245
           K  I++FF G+ + +  + +    +G+ +GEAFVEF   ++++ AMAKD+M++GSRY+EL
Sbjct: 190 KPQIIEFFSGYKVIQGRVQVVCRPDGKATGEAFVEFETGEEARRAMAKDKMSIGSRYVEL 249

Query: 246 FPSSQEELDEAISRGR 256
           FP+++EE   A +R R
Sbjct: 250 FPTTREEARRAEARSR 254

[Close]

BLAST of MC02g0104 vs. TAIR 10
Match: AT5G66010.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 147.9 bits (372), Expect = 1.1e-35
Identity = 74/159 (46.54%), Postives = 112/159 (70.44%), Query Frame = 0


Query: 101 LQVDFALQRNRQNMGRRYVEIFRSNRQEYYKALANE----VFDARGGSPRRTAPSWSKPN 160
           +QV+ ALQR+R NMGRRYVE+FR ++Q+YY A+A E     ++ R  SP  T PS +K  
Sbjct: 1   MQVEIALQRDRHNMGRRYVEVFRCSKQDYYNAVAAEEGAYEYEVR-ASPPPTGPSRAKRF 60

Query: 161 NEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHLTLNSEGRPSGEAFVEFA 220
           +E K+  E+T VL++RGLPYS  K  I++FF G+ + +  + +    +G+ +GEAFVEF 
Sbjct: 61  SE-KEKLEYTEVLKMRGLPYSVNKPQIIEFFSGYKVIQGRVQVVCRPDGKATGEAFVEFE 120

Query: 221 NVQDSKAAMAKDRMTLGSRYIELFPSSQEELDEAISRGR 256
             ++++ AMAKD+M++GSRY+ELFP+++EE   A +R R
Sbjct: 121 TGEEARRAMAKDKMSIGSRYVELFPTTREEARRAEARSR 157

[Close]

BLAST of MC02g0104 vs. TAIR 10
Match: AT4G19610.1 (nucleotide binding;nucleic acid binding;RNA binding )

HSP 1 Score: 42.0 bits (97), Expect = 8.6e-04
Identity = 25/99 (25.25%), Postives = 51/99 (51.52%), Query Frame = 0


Query: 153 SKPNNEVKDSAEHTGVLRLRGLPYSAGKDDILDFFKGFNLSEDLIHLTLNSEGRPS-GEA 212
           ++ +  V D    TG L +R LPY+A ++++++ F  F    + +HL L+ E + S G A
Sbjct: 280 AQESKAVSDDVLDTGRLFVRNLPYTATEEELMEHFSTFGKISE-VHLVLDKETKRSRGIA 339

Query: 213 FVEFANVQDSKAAMAK-DRMTLGSRYIELFPSSQEELDE 250
           ++ +   + +  AM + D  +   R + + P+   E  +
Sbjct: 340 YILYLIPECAARAMEELDNSSFQGRLLHILPAKHRETSD 377

The following BLAST results are available for this feature:

BLAST of MC02g0104 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P52597	4.9e-28	38.00	Heterogeneous nuclear ribonucleoprotein F OS=Homo sapiens OX=9606 GN=HNRNPF PE=1...	[more]
Q60HC3	4.9e-28	38.00	Heterogeneous nuclear ribonucleoprotein F OS=Macaca fascicularis OX=9541 GN=HNRN...	[more]
Q9Z2X1	4.1e-27	38.00	Heterogeneous nuclear ribonucleoprotein F OS=Mus musculus OX=10090 GN=Hnrnpf PE=...	[more]
Q794E4	4.1e-27	38.00	Heterogeneous nuclear ribonucleoprotein F OS=Rattus norvegicus OX=10116 GN=Hnrnp...	[more]
Q5E9J1	5.4e-27	37.50	Heterogeneous nuclear ribonucleoprotein F OS=Bos taurus OX=9913 GN=HNRNPF PE=2 S...	[more]

BLAST of MC02g0104 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148687.1	4.78e-187	100.00	heterogeneous nuclear ribonucleoprotein F [Momordica charantia]	[more]
XP_004142112.1	7.48e-173	93.70	heterogeneous nuclear ribonucleoprotein F [Cucumis sativus] >XP_008449713.1 PRED...	[more]
KAA0041416.1	4.62e-172	93.70	heterogeneous nuclear ribonucleoprotein H isoform X1 [Cucumis melo var. makuwa]	[more]
TYJ96136.1	2.02e-171	93.70	heterogeneous nuclear ribonucleoprotein H isoform X1 [Cucumis melo var. makuwa]	[more]
XP_038901811.1	2.50e-171	92.91	heterogeneous nuclear ribonucleoprotein F isoform X1 [Benincasa hispida]	[more]

BLAST of MC02g0104 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D5R6	2.32e-187	100.00	heterogeneous nuclear ribonucleoprotein F OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A0A0L205	3.62e-173	93.70	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G291930 PE=4 SV...	[more]
A0A1S3BMM3	3.62e-173	93.70	heterogeneous nuclear ribonucleoprotein F OS=Cucumis melo OX=3656 GN=LOC10349150...	[more]
A0A5A7TH86	2.23e-172	93.70	Heterogeneous nuclear ribonucleoprotein H isoform X1 OS=Cucumis melo var. makuwa...	[more]
A0A5D3BB71	9.78e-172	93.70	Heterogeneous nuclear ribonucleoprotein H isoform X1 OS=Cucumis melo var. makuwa...	[more]

BLAST of MC02g0104 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20890.1	2.1e-98	61.94	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G66010.1	8.4e-60	47.66	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G66010.2	1.1e-35	46.54	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G19610.1	8.6e-04	25.25	nucleotide binding;nucleic acid binding;RNA binding	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 168..240 e-value: 1.7E-8 score: 44.2 coord: 53..122 e-value: 0.077 score: 16.5
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 170..237 e-value: 1.3E-9 score: 37.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 167..244 score: 9.79736
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 39..139 e-value: 2.4E-20 score: 74.4 coord: 151..254 e-value: 3.4E-29 score: 103.0
None	No IPR available	PANTHER	PTHR13976:SF76	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 5..255
None	No IPR available	PANTHER	PTHR13976	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED	coord: 5..255
None	No IPR available	CDD	cd12254	RRM_hnRNPH_ESRPs_RBM12_like	coord: 53..122 e-value: 1.26491E-21 score: 83.7607
None	No IPR available	CDD	cd12254	RRM_hnRNPH_ESRPs_RBM12_like	coord: 168..240 e-value: 1.00823E-29 score: 104.561
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 43..131
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 155..251

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g0104.1	MC02g0104.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding