MC02g0080 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g0080
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	GTD-binding domain-containing protein
Location	MC02: 794603 .. 795046 (-)
RNA-Seq Expression	MC02g0080
Synteny	MC02g0080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTAAGTTTTTGGTGTTCGGATGTTTTCTGCGAGTTTTTGTAATTTGGGGGCTTTTTCTGCTTTTTTGGATGGCTTTGAAGGTTCTGCAATTCAGTTGGCATGGTGGGGATTTGATGCAATTTCTATGCGATTTTAGAGATAAATCTACTAATAACGTAAGGACTGGATTTTTATTCAAAAACAGTGTTGTGTTGAGGTGTGTAATTCAAAAACTATGCAAACTTGTGGAAGTAGACGACGGAATTGGTTGAAGAGGAATGGATTCTTGTTCAATAAATTCAATTTAGTTGGAAACTCCAAATGGCCGCAGTGGGGATGCGGACGGTGATGTTAAGAGTGAAGAAAAGGATGTAGTTTTAGAAGATGATATCCAGAACGAAGAGAAAGAAAATGATTCTGAAGGTGAAGATGCTGAATTTGATGTTACCAGATTAAGAAAATTT

mRNA sequence

AGTAAGTTTTTGGTGTTCGGATGTTTTCTGCGAGTTTTTGTAATTTGGGGGCTTTTTCTGCTTTTTTGGATGGCTTTGAAGGTTCTGCAATTCAGTTGGCATGGTGGGGATTTGATGCAATTTCTATGCGATTTTAGAGATAAATCTACTAATAACGTAAGGACTGGATTTTTATTCAAAAACAGTGTTGAGGTGTGTAATTCAAAAACTATGCAAACTTGTGGAAGTAGACGACGGAATTGGTTGAAGAGGAATGGATTCTTGTTCAATAAATTCAATTTAGTTGGAAACTCCAAATGGCCGGGGGATGCGGACGGTGATGTTAAGAGTGAAGAAAAGGATGTAGTTTTAGAAGATGATATCCAGAACGAAGAGAAAGAAAATGATTCTGAAGGTGAAGATGCTGAATTTGATGTTACCAGATTAAGAAAATTT

Coding sequence (CDS)

AGTAAGTTTTTGGTGTTCGGATGTTTTCTGCGAGTTTTTGTAATTTGGGGGCTTTTTCTGCTTTTTTGGATGGCTTTGAAGGTTCTGCAATTCAGTTGGCATGGTGGGGATTTGATGCAATTTCTATGCGATTTTAGAGATAAATCTACTAATAACGTAAGGACTGGATTTTTATTCAAAAACAGTGTTGAGGTGTGTAATTCAAAAACTATGCAAACTTGTGGAAGTAGACGACGGAATTGGTTGAAGAGGAATGGATTCTTGTTCAATAAATTCAATTTAGTTGGAAACTCCAAATGGCCGGGGGATGCGGACGGTGATGTTAAGAGTGAAGAAAAGGATGTAGTTTTAGAAGATGATATCCAGAACGAAGAGAAAGAAAATGATTCTGAAGGTGAAGATGCTGAATTTGATGTTACCAGATTAAGAAAATTT

Protein sequence

SKFLVFGCFLRVFVIWGLFLLFWMALKVLQFSWHGGDLMQFLCDFRDKSTNNVRTGFLFKNSVEVCNSKTMQTCGSRRRNWLKRNGFLFNKFNLVGNSKWPGDADGDVKSEEKDVVLEDDIQNEEKENDSEGEDAEFDVTRLRKF

Homology

[Close]

BLAST of MC02g0080 vs. NCBI nr
Match: XP_022149137.1 (protein FLOURY 1-like [Momordica charantia])

HSP 1 Score: 224 bits (571), Expect = 1.21e-70
Identity = 124/145 (85.52%), Postives = 127/145 (87.59%), Query Frame = 0


Query: 4   LVFGCFLRVFVIWGLFLLFWMALKVLQFSWHGGDLMQFLCDFRDKSTNNVRTGFLFKNSV 63
           LVFGCF RVFVI GLFLLFWMALKVLQFSWHGGD MQFLCDFR+KS N VRTGF  K SV
Sbjct: 23  LVFGCFPRVFVILGLFLLFWMALKVLQFSWHGGDFMQFLCDFREKSANYVRTGFWLKTSV 82

Query: 64  -EVCNSKTMQTCGSRRRNWLK-RNGFLFNKFNLVGNSKWPGDADGDVKSEEKD-VVLEDD 123
            EVCNSKTMQTCGSRRRNWLK R+GFLFNKFNLV NSKW  DADGDVKSEEKD VV+EDD
Sbjct: 83  VEVCNSKTMQTCGSRRRNWLKIRSGFLFNKFNLVANSKWGVDADGDVKSEEKDNVVVEDD 142

Query: 124 IQNEEKENDSEGEDAEFDVTRLRKF 145
           IQNEEKENDS  EDAEFDV RLRK 
Sbjct: 143 IQNEEKENDS--EDAEFDVIRLRKL 165

[Close]

BLAST of MC02g0080 vs. NCBI nr
Match: XP_023552476.1 (protein FLOURY 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 184 bits (468), Expect = 4.18e-55
Identity = 98/146 (67.12%), Postives = 114/146 (78.08%), Query Frame = 0


Query: 1   SKFLVFGCFLRVFVIWGLFLLFWMALKVLQFSWHGGDLMQFLCDFRDKSTNNVRTGFLFK 60
           S FLVFGCF RVF+I GLFLLFW++ K++QFSWH GD M F CDF++KS N +R G   K
Sbjct: 19  SWFLVFGCFPRVFIILGLFLLFWISFKIVQFSWHCGDWMLFRCDFKEKSAN-IRAGIWLK 78

Query: 61  NSV-EVCNSKTMQTCGSRRRNWLKRNGFLFNKFNLVGNSKWPGDADGDVKSEEKDVVLED 120
            SV EVCNSKT+QTC SRR NWLK+NGFLF+KFNL+ N KW  D+DGDVKSEEK  VLED
Sbjct: 79  TSVVEVCNSKTVQTCRSRRLNWLKKNGFLFSKFNLIANPKWTVDSDGDVKSEEKGAVLED 138

Query: 121 DIQNEEKENDSEGEDAEFDVTRLRKF 145
            + NEE E DS  ED EFDVT+LR+ 
Sbjct: 139 YVHNEENEKDS--EDGEFDVTKLREL 161

[Close]

BLAST of MC02g0080 vs. NCBI nr
Match: KAG6576883.1 (Myosin-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 183 bits (465), Expect = 1.18e-54
Identity = 98/146 (67.12%), Postives = 114/146 (78.08%), Query Frame = 0


Query: 1   SKFLVFGCFLRVFVIWGLFLLFWMALKVLQFSWHGGDLMQFLCDFRDKSTNNVRTGFLFK 60
           S FLVFGCF RVF+I GLFLLFW++ K++QFSWH GD M F CDF++KS N +R G   K
Sbjct: 19  SWFLVFGCFPRVFIILGLFLLFWISFKIVQFSWHCGDWMLFRCDFKEKSAN-IRAGIWLK 78

Query: 61  NSV-EVCNSKTMQTCGSRRRNWLKRNGFLFNKFNLVGNSKWPGDADGDVKSEEKDVVLED 120
            SV EVCNSKT+QTC SRR NWLK+NGFLF+KFNLV N KW  D+DGD KSEEK  VLED
Sbjct: 79  TSVVEVCNSKTVQTCRSRRLNWLKKNGFLFSKFNLVANPKWTVDSDGDDKSEEKGAVLED 138

Query: 121 DIQNEEKENDSEGEDAEFDVTRLRKF 145
            ++NEE ENDS  ED EFDV +LR+ 
Sbjct: 139 YVENEENENDS--EDGEFDVAKLREL 161

[Close]

BLAST of MC02g0080 vs. NCBI nr
Match: XP_022985083.1 (protein FLOURY 1-like [Cucurbita maxima])

HSP 1 Score: 181 bits (460), Expect = 6.73e-54
Identity = 98/146 (67.12%), Postives = 113/146 (77.40%), Query Frame = 0


Query: 1   SKFLVFGCFLRVFVIWGLFLLFWMALKVLQFSWHGGDLMQFLCDFRDKSTNNVRTGFLFK 60
           S FLVFGCF RVF+I GLFLLFW++ K++QFSWH GD M F CDF++KS N +R G   K
Sbjct: 19  SWFLVFGCFPRVFIILGLFLLFWISFKIVQFSWHCGDWMLFRCDFKEKSAN-IRDGIWLK 78

Query: 61  NSV-EVCNSKTMQTCGSRRRNWLKRNGFLFNKFNLVGNSKWPGDADGDVKSEEKDVVLED 120
            SV EVCNSKT+QTC SRR NWLK+NG LF+KFNLV N  W  D+DGDVKSEEK  VLED
Sbjct: 79  TSVVEVCNSKTVQTCRSRRLNWLKKNGCLFSKFNLVANPTWTVDSDGDVKSEEKGAVLED 138

Query: 121 DIQNEEKENDSEGEDAEFDVTRLRKF 145
            + NEE ENDS  ED EFDVT+LR+ 
Sbjct: 139 YVHNEENENDS--EDGEFDVTKLREL 161

[Close]

BLAST of MC02g0080 vs. NCBI nr
Match: XP_022922517.1 (protein FLOURY 1-like [Cucurbita moschata])

HSP 1 Score: 174 bits (440), Expect = 6.42e-51
Identity = 96/146 (65.75%), Postives = 112/146 (76.71%), Query Frame = 0


Query: 1   SKFLVFGCFLRVFVIWGLFLLFWMALKVLQFSWHGGDLMQFLCDFRDKSTNNVRTGFLFK 60
           S FLVFGCF RVF+I GLFLLFW++ K++QFSWH GD M F CDF++KS N +R G   K
Sbjct: 19  SWFLVFGCFPRVFIILGLFLLFWISFKIVQFSWHCGDWMLFRCDFKEKSAN-IRAGIWLK 78

Query: 61  NSV-EVCNSKTMQTCGSRRRNWLKRNGFLFNKFNLVGNSKWPGDADGDVKSEEKDVVLED 120
            SV EVCNSKT+QTC SRR NWLK+NGFLF+KFNLV N KW  D+DGD KSEEK    ED
Sbjct: 79  TSVVEVCNSKTVQTCRSRRLNWLKKNGFLFSKFNLVANPKWTVDSDGDDKSEEKG---ED 138

Query: 121 DIQNEEKENDSEGEDAEFDVTRLRKF 145
            ++NEE ENDS  ED EFDV +LR+ 
Sbjct: 139 YVENEENENDS--EDGEFDVAKLREL 158

[Close]

BLAST of MC02g0080 vs. ExPASy TrEMBL
Match: A0A6J1D707 (protein FLOURY 1-like OS=Momordica charantia OX=3673 GN=LOC111017630 PE=4 SV=1)

HSP 1 Score: 224 bits (571), Expect = 5.85e-71
Identity = 124/145 (85.52%), Postives = 127/145 (87.59%), Query Frame = 0


Query: 4   LVFGCFLRVFVIWGLFLLFWMALKVLQFSWHGGDLMQFLCDFRDKSTNNVRTGFLFKNSV 63
           LVFGCF RVFVI GLFLLFWMALKVLQFSWHGGD MQFLCDFR+KS N VRTGF  K SV
Sbjct: 23  LVFGCFPRVFVILGLFLLFWMALKVLQFSWHGGDFMQFLCDFREKSANYVRTGFWLKTSV 82

Query: 64  -EVCNSKTMQTCGSRRRNWLK-RNGFLFNKFNLVGNSKWPGDADGDVKSEEKD-VVLEDD 123
            EVCNSKTMQTCGSRRRNWLK R+GFLFNKFNLV NSKW  DADGDVKSEEKD VV+EDD
Sbjct: 83  VEVCNSKTMQTCGSRRRNWLKIRSGFLFNKFNLVANSKWGVDADGDVKSEEKDNVVVEDD 142

Query: 124 IQNEEKENDSEGEDAEFDVTRLRKF 145
           IQNEEKENDS  EDAEFDV RLRK 
Sbjct: 143 IQNEEKENDS--EDAEFDVIRLRKL 165

[Close]

BLAST of MC02g0080 vs. ExPASy TrEMBL
Match: A0A6J1JCJ1 (protein FLOURY 1-like OS=Cucurbita maxima OX=3661 GN=LOC111483161 PE=4 SV=1)

HSP 1 Score: 181 bits (460), Expect = 3.26e-54
Identity = 98/146 (67.12%), Postives = 113/146 (77.40%), Query Frame = 0


Query: 1   SKFLVFGCFLRVFVIWGLFLLFWMALKVLQFSWHGGDLMQFLCDFRDKSTNNVRTGFLFK 60
           S FLVFGCF RVF+I GLFLLFW++ K++QFSWH GD M F CDF++KS N +R G   K
Sbjct: 19  SWFLVFGCFPRVFIILGLFLLFWISFKIVQFSWHCGDWMLFRCDFKEKSAN-IRDGIWLK 78

Query: 61  NSV-EVCNSKTMQTCGSRRRNWLKRNGFLFNKFNLVGNSKWPGDADGDVKSEEKDVVLED 120
            SV EVCNSKT+QTC SRR NWLK+NG LF+KFNLV N  W  D+DGDVKSEEK  VLED
Sbjct: 79  TSVVEVCNSKTVQTCRSRRLNWLKKNGCLFSKFNLVANPTWTVDSDGDVKSEEKGAVLED 138

Query: 121 DIQNEEKENDSEGEDAEFDVTRLRKF 145
            + NEE ENDS  ED EFDVT+LR+ 
Sbjct: 139 YVHNEENENDS--EDGEFDVTKLREL 161

[Close]

BLAST of MC02g0080 vs. ExPASy TrEMBL
Match: A0A6J1E3H4 (protein FLOURY 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430494 PE=4 SV=1)

HSP 1 Score: 174 bits (440), Expect = 3.11e-51
Identity = 96/146 (65.75%), Postives = 112/146 (76.71%), Query Frame = 0


Query: 1   SKFLVFGCFLRVFVIWGLFLLFWMALKVLQFSWHGGDLMQFLCDFRDKSTNNVRTGFLFK 60
           S FLVFGCF RVF+I GLFLLFW++ K++QFSWH GD M F CDF++KS N +R G   K
Sbjct: 19  SWFLVFGCFPRVFIILGLFLLFWISFKIVQFSWHCGDWMLFRCDFKEKSAN-IRAGIWLK 78

Query: 61  NSV-EVCNSKTMQTCGSRRRNWLKRNGFLFNKFNLVGNSKWPGDADGDVKSEEKDVVLED 120
            SV EVCNSKT+QTC SRR NWLK+NGFLF+KFNLV N KW  D+DGD KSEEK    ED
Sbjct: 79  TSVVEVCNSKTVQTCRSRRLNWLKKNGFLFSKFNLVANPKWTVDSDGDDKSEEKG---ED 138

Query: 121 DIQNEEKENDSEGEDAEFDVTRLRKF 145
            ++NEE ENDS  ED EFDV +LR+ 
Sbjct: 139 YVENEENENDS--EDGEFDVAKLREL 158

[Close]

BLAST of MC02g0080 vs. ExPASy TrEMBL
Match: A0A0A0KYH0 (GTD-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G181710 PE=4 SV=1)

HSP 1 Score: 161 bits (407), Expect = 2.74e-46
Identity = 95/148 (64.19%), Postives = 115/148 (77.70%), Query Frame = 0


Query: 1   SKFLVFGCFLRVFVIWGLFLL-FWMALKVLQFSWHGGDLMQFLCDFRDKSTNNVRTGFLF 60
           S FLVFGCF RVF+I GLFLL FW++LKV+QFSWHG DLMQ L DFR+KS +N+R G   
Sbjct: 15  SWFLVFGCFPRVFIILGLFLLLFWLSLKVVQFSWHGRDLMQLLYDFREKS-DNIRAGTWL 74

Query: 61  K-NSVEVCNSKTMQTCG-SRRRNWLKRNGFLFNKFNLVGNSKWPGDADGDVKSEEKDVVL 120
           K N VEVCNS     CG S+R +WLK+NGFLF KFNLV NSKW  D++ DV+S+EK+ +L
Sbjct: 75  KTNVVEVCNS----ICGISKRSDWLKKNGFLFCKFNLVANSKWAVDSEDDVRSDEKNEML 134

Query: 121 EDDIQNEEKENDSEGEDAEFDVTRLRKF 145
           E+D+QNEEKEN S  ED EFDV +LR+ 
Sbjct: 135 EEDVQNEEKENYS--EDGEFDVIKLREL 155

[Close]

BLAST of MC02g0080 vs. ExPASy TrEMBL
Match: A0A1S3BY69 (uncharacterized protein LOC103494857 OS=Cucumis melo OX=3656 GN=LOC103494857 PE=4 SV=1)

HSP 1 Score: 159 bits (403), Expect = 1.09e-45
Identity = 95/148 (64.19%), Postives = 113/148 (76.35%), Query Frame = 0


Query: 1   SKFLVFGCFLRVFVIWGLFLL-FWMALKVLQFSWHGGDLMQFLCDFRDKSTNNVRTGFLF 60
           S FLVFGCF R+F+I GLFLL FW +LKV+QFSWHG DLMQ L DFR KS +N+R G   
Sbjct: 15  SWFLVFGCFPRLFIILGLFLLLFWASLKVVQFSWHGRDLMQLLYDFRGKS-DNIRAGIWL 74

Query: 61  K-NSVEVCNSKTMQTCG-SRRRNWLKRNGFLFNKFNLVGNSKWPGDADGDVKSEEKDVVL 120
           K N VEVCN     TCG SRR +WLK+NGFLF KFNLV  SKW  D++GDV+S+EK+ +L
Sbjct: 75  KTNVVEVCNF----TCGISRRLDWLKKNGFLFCKFNLVAKSKWAVDSEGDVRSDEKNEML 134

Query: 121 EDDIQNEEKENDSEGEDAEFDVTRLRKF 145
           E+D+QNEEKEN S  ED EFDV +LR+ 
Sbjct: 135 EEDVQNEEKENYS--EDGEFDVIKLREL 155

The following BLAST results are available for this feature:

BLAST of MC02g0080 vs.


Match Name	E-value	Identity	Description

BLAST of MC02g0080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149137.1	1.21e-70	85.52	protein FLOURY 1-like [Momordica charantia]	[more]
XP_023552476.1	4.18e-55	67.12	protein FLOURY 1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6576883.1	1.18e-54	67.12	Myosin-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022985083.1	6.73e-54	67.12	protein FLOURY 1-like [Cucurbita maxima]	[more]
XP_022922517.1	6.42e-51	65.75	protein FLOURY 1-like [Cucurbita moschata]	[more]

BLAST of MC02g0080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D707	5.85e-71	85.52	protein FLOURY 1-like OS=Momordica charantia OX=3673 GN=LOC111017630 PE=4 SV=1	[more]
A0A6J1JCJ1	3.26e-54	67.12	protein FLOURY 1-like OS=Cucurbita maxima OX=3661 GN=LOC111483161 PE=4 SV=1	[more]
A0A6J1E3H4	3.11e-51	65.75	protein FLOURY 1-like OS=Cucurbita moschata OX=3662 GN=LOC111430494 PE=4 SV=1	[more]
A0A0A0KYH0	2.74e-46	64.19	GTD-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G181710...	[more]
A0A1S3BY69	1.09e-45	64.19	uncharacterized protein LOC103494857 OS=Cucumis melo OX=3656 GN=LOC103494857 PE=...	[more]

BLAST of MC02g0080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g0080.1	MC02g0080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0080115	myosin XI tail binding