Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AATAATGTTGGGTTGGAGTCGTGCGGTGGGATGAGTGAAGCAAATTACAACCCTAACCAAATTTTATGGTCAAAAGAGCTGAAAACCTACGTTCTTAAGTCAAATAATCAAACTTCATTGGGTAGTCATGATCAAGTGAAGGGCAATATTGGCATTGGAAATGGCAGCACTACAAATAACTTGGCCAATGTTCCTCTTCAAACCAACAGCAACGACCTCTACACACTCCTCAACCCCGCTTCAAGATCAACAGATGATCACGAAGATGAAACTTCCTCCGGCAGCCGGCGGAAAGCTTCGCGGCTGCGTCGAGTCTCACACGACGAACCTGAAAAGCGGTGCACCAATTACAATTGCAACACTAATTTTACACCCATGTGGCGTAAAGGCCCTCTAGGTCCCAAGGTA
mRNA sequence
AATAATGTTGGGTTGGAGTCGTGCGGTGGGATGAGTGAAGCAAATTACAACCCTAACCAAATTTTATGGTCAAAAGAGCTGAAAACCTACGTTCTTAAGTCAAATAATCAAACTTCATTGGGTAGTCATGATCAAGTGAAGGGCAATATTGGCATTGGAAATGGCAGCACTACAAATAACTTGGCCAATGTTCCTCTTCAAACCAACAGCAACGACCTCTACACACTCCTCAACCCCGCTTCAAGATCAACAGATGATCACGAAGATGAAACTTCCTCCGGCAGCCGGCGGAAAGCTTCGCGGCTGCGTCGAGTCTCACACGACGAACCTGAAAAGCGGTGCACCAATTACAATTGCAACACTAATTTTACACCCATGTGGCGTAAAGGCCCTCTAGGTCCCAAGGTA
Coding sequence (CDS)
AATAATGTTGGGTTGGAGTCGTGCGGTGGGATGAGTGAAGCAAATTACAACCCTAACCAAATTTTATGGTCAAAAGAGCTGAAAACCTACGTTCTTAAGTCAAATAATCAAACTTCATTGGGTAGTCATGATCAAGTGAAGGGCAATATTGGCATTGGAAATGGCAGCACTACAAATAACTTGGCCAATGTTCCTCTTCAAACCAACAGCAACGACCTCTACACACTCCTCAACCCCGCTTCAAGATCAACAGATGATCACGAAGATGAAACTTCCTCCGGCAGCCGGCGGAAAGCTTCGCGGCTGCGTCGAGTCTCACACGACGAACCTGAAAAGCGGTGCACCAATTACAATTGCAACACTAATTTTACACCCATGTGGCGTAAAGGCCCTCTAGGTCCCAAGGTA
Protein sequence
NNVGLESCGGMSEANYNPNQILWSKELKTYVLKSNNQTSLGSHDQVKGNIGIGNGSTTNNLANVPLQTNSNDLYTLLNPASRSTDDHEDETSSGSRRKASRLRRVSHDEPEKRCTNYNCNTNFTPMWRKGPLGPKV
Homology
BLAST of MC02g0074 vs. ExPASy Swiss-Prot
Match:
Q9LT45 (GATA transcription factor 29 OS=Arabidopsis thaliana OX=3702 GN=GATA29 PE=2 SV=1)
HSP 1 Score: 44.7 bits (104), Expect = 9.9e-04
Identity = 25/73 (34.25%), Postives = 38/73 (52.05%), Query Frame = 0
Query: 71 NDLYTLLNPASRSTDDHEDETSSGSRRKASRLRRV--------SHDEPEKRCTNYNCNTN 130
+D Y L++ +R + + S ++ + +R+ E K+CTN NCN
Sbjct: 108 SDEYVLIDVPARRARRNNSTVMTNSWKENATPKRIRGCGGFCGGRIEGMKKCTNMNCNAL 167
Query: 131 FTPMWRKGPLGPK 136
TPMWR+GPLGPK
Sbjct: 168 NTPMWRRGPLGPK 180
BLAST of MC02g0074 vs. NCBI nr
Match:
XP_022153837.1 (GATA transcription factor 29 [Momordica charantia] >XP_022153838.1 GATA transcription factor 29 [Momordica charantia])
HSP 1 Score: 275 bits (704), Expect = 4.88e-92
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0
Query: 1 NNVGLESCGGMSEANYNPNQILWSKELKTYVLKSNNQTSLGSHDQVKGNIGIGNGSTTNN 60
NNVGLESCGGMSEANYNPNQILWSKELKTYVLKSNNQTSLGSHDQVKGNIGIGNGSTTNN
Sbjct: 61 NNVGLESCGGMSEANYNPNQILWSKELKTYVLKSNNQTSLGSHDQVKGNIGIGNGSTTNN 120
Query: 61 LANVPLQTNSNDLYTLLNPASRSTDDHEDETSSGSRRKASRLRRVSHDEPEKRCTNYNCN 120
LANVPLQTNSNDLYTLLNPASRSTDDHEDETSSGSRRKASRLRRVSHDEPEKRCTNYNCN
Sbjct: 121 LANVPLQTNSNDLYTLLNPASRSTDDHEDETSSGSRRKASRLRRVSHDEPEKRCTNYNCN 180
Query: 121 TNFTPMWRKGPLGPK 135
TNFTPMWRKGPLGPK
Sbjct: 181 TNFTPMWRKGPLGPK 195
BLAST of MC02g0074 vs. NCBI nr
Match:
XP_022985849.1 (GATA zinc finger domain-containing protein 8-like [Cucurbita maxima])
HSP 1 Score: 162 bits (409), Expect = 1.07e-46
Identity = 93/143 (65.03%), Postives = 103/143 (72.03%), Query Frame = 0
Query: 1 NNVGLESCGG-----MSEANYNPNQILWSKELKTYVLKSNNQTSLGSHDQVKGNIGIGN- 60
NN GL S GG MSEANYNP+QI+WSKELKTYVLKSNN L H + N
Sbjct: 97 NNHGLASSGGRNGEMMSEANYNPHQIVWSKELKTYVLKSNNFGQL--HPSLYCNTYPAKT 156
Query: 61 -GSTTNNLANVPLQTNSNDLYTLLNPASRSTDDHEDETSSGSRRKASRLRRVSH-DEPEK 120
GST N+ AN+PLQ +ND YTLLNPA R DDHE E SSGSRR+ + RRVS +E E+
Sbjct: 157 VGSTANSTANLPLQNYNNDQYTLLNPACRKADDHEAEASSGSRRRGLQRRRVSACNEVER 216
Query: 121 RCTNYNCNTNFTPMWRKGPLGPK 135
RCTNYNCNTNFTPMWRKGPLGPK
Sbjct: 217 RCTNYNCNTNFTPMWRKGPLGPK 237
BLAST of MC02g0074 vs. NCBI nr
Match:
XP_023522473.1 (GATA transcription factor 21-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 159 bits (401), Expect = 1.18e-46
Identity = 93/144 (64.58%), Postives = 104/144 (72.22%), Query Frame = 0
Query: 1 NNVGLESCGG-----MSEANYNPNQILWSKELKTYVLKSNNQTSLGSHDQVKGNIGIGN- 60
NN GL S GG MSEANYNP+QI+WSKELKTYVLKSNN L H + N
Sbjct: 4 NNHGLASSGGRSGEMMSEANYNPHQIVWSKELKTYVLKSNNFGQL--HPSLYCNTYPAKT 63
Query: 61 -GSTTNNLANVPLQTNSNDLYTLLNPASRSTDDHEDETSSGS-RRKASRLRRVSH-DEPE 120
GST N++AN+PLQ +ND YTLLNPA R TDDHE E SSG RR+ + RRVS +E E
Sbjct: 64 IGSTANSMANLPLQNYNNDQYTLLNPACRKTDDHEAEASSGGGRRRGLQRRRVSACNEVE 123
Query: 121 KRCTNYNCNTNFTPMWRKGPLGPK 135
+RCTNYNCNTNFTPMWRKGPLGPK
Sbjct: 124 RRCTNYNCNTNFTPMWRKGPLGPK 145
BLAST of MC02g0074 vs. NCBI nr
Match:
XP_038902274.1 (putative GATA transcription factor 22 [Benincasa hispida])
HSP 1 Score: 159 bits (401), Expect = 9.37e-46
Identity = 88/140 (62.86%), Postives = 100/140 (71.43%), Query Frame = 0
Query: 2 NVGLESCGG-----MSEANYNPNQILWSKELKTYVLKSNNQTSLGSHDQVKGNIGIGNGS 61
N G S GG MSEANYNP+QI+WSKELKTYVLKSN+ L + +
Sbjct: 76 NHGSASSGGRNGEMMSEANYNPHQIVWSKELKTYVLKSNDFGQLHPSSYSNTHQAKPIAT 135
Query: 62 TTNNLANVPLQTNSNDLYTLLNPASRSTDDHEDETSSGSRRKASRLRRVS-HDEPEKRCT 121
T NN N+PL +NDLYTLLNPASR TDDHE E SSG RR+ SR RRVS +++ E+RCT
Sbjct: 136 TPNNSPNLPLPKYNNDLYTLLNPASRITDDHEAEASSGGRRRGSRRRRVSANNDAERRCT 195
Query: 122 NYNCNTNFTPMWRKGPLGPK 135
NYNCNTNFTPMWRKGPLGPK
Sbjct: 196 NYNCNTNFTPMWRKGPLGPK 215
BLAST of MC02g0074 vs. NCBI nr
Match:
XP_023513295.1 (putative GATA transcription factor 22 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 159 bits (401), Expect = 1.77e-45
Identity = 93/144 (64.58%), Postives = 104/144 (72.22%), Query Frame = 0
Query: 1 NNVGLESCGG-----MSEANYNPNQILWSKELKTYVLKSNNQTSLGSHDQVKGNIGIGN- 60
NN GL S GG MSEANYNP+QI+WSKELKTYVLKSNN L H + N
Sbjct: 97 NNHGLASSGGRSGEMMSEANYNPHQIVWSKELKTYVLKSNNFGQL--HPSLYCNTYPAKT 156
Query: 61 -GSTTNNLANVPLQTNSNDLYTLLNPASRSTDDHEDETSSGS-RRKASRLRRVSH-DEPE 120
GST N++AN+PLQ +ND YTLLNPA R TDDHE E SSG RR+ + RRVS +E E
Sbjct: 157 IGSTANSMANLPLQNYNNDQYTLLNPACRKTDDHEAEASSGGGRRRGLQRRRVSACNEVE 216
Query: 121 KRCTNYNCNTNFTPMWRKGPLGPK 135
+RCTNYNCNTNFTPMWRKGPLGPK
Sbjct: 217 RRCTNYNCNTNFTPMWRKGPLGPK 238
BLAST of MC02g0074 vs. ExPASy TrEMBL
Match:
A0A6J1DIM0 (GATA transcription factor 29 OS=Momordica charantia OX=3673 GN=LOC111021259 PE=4 SV=1)
HSP 1 Score: 275 bits (704), Expect = 2.36e-92
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0
Query: 1 NNVGLESCGGMSEANYNPNQILWSKELKTYVLKSNNQTSLGSHDQVKGNIGIGNGSTTNN 60
NNVGLESCGGMSEANYNPNQILWSKELKTYVLKSNNQTSLGSHDQVKGNIGIGNGSTTNN
Sbjct: 61 NNVGLESCGGMSEANYNPNQILWSKELKTYVLKSNNQTSLGSHDQVKGNIGIGNGSTTNN 120
Query: 61 LANVPLQTNSNDLYTLLNPASRSTDDHEDETSSGSRRKASRLRRVSHDEPEKRCTNYNCN 120
LANVPLQTNSNDLYTLLNPASRSTDDHEDETSSGSRRKASRLRRVSHDEPEKRCTNYNCN
Sbjct: 121 LANVPLQTNSNDLYTLLNPASRSTDDHEDETSSGSRRKASRLRRVSHDEPEKRCTNYNCN 180
Query: 121 TNFTPMWRKGPLGPK 135
TNFTPMWRKGPLGPK
Sbjct: 181 TNFTPMWRKGPLGPK 195
BLAST of MC02g0074 vs. ExPASy TrEMBL
Match:
A0A6J1JEF0 (GATA zinc finger domain-containing protein 8-like OS=Cucurbita maxima OX=3661 GN=LOC111483776 PE=4 SV=1)
HSP 1 Score: 162 bits (409), Expect = 5.20e-47
Identity = 93/143 (65.03%), Postives = 103/143 (72.03%), Query Frame = 0
Query: 1 NNVGLESCGG-----MSEANYNPNQILWSKELKTYVLKSNNQTSLGSHDQVKGNIGIGN- 60
NN GL S GG MSEANYNP+QI+WSKELKTYVLKSNN L H + N
Sbjct: 97 NNHGLASSGGRNGEMMSEANYNPHQIVWSKELKTYVLKSNNFGQL--HPSLYCNTYPAKT 156
Query: 61 -GSTTNNLANVPLQTNSNDLYTLLNPASRSTDDHEDETSSGSRRKASRLRRVSH-DEPEK 120
GST N+ AN+PLQ +ND YTLLNPA R DDHE E SSGSRR+ + RRVS +E E+
Sbjct: 157 VGSTANSTANLPLQNYNNDQYTLLNPACRKADDHEAEASSGSRRRGLQRRRVSACNEVER 216
Query: 121 RCTNYNCNTNFTPMWRKGPLGPK 135
RCTNYNCNTNFTPMWRKGPLGPK
Sbjct: 217 RCTNYNCNTNFTPMWRKGPLGPK 237
BLAST of MC02g0074 vs. ExPASy TrEMBL
Match:
A0A6J1FTP0 (GATA zinc finger domain-containing protein 8-like OS=Cucurbita moschata OX=3662 GN=LOC111448354 PE=4 SV=1)
HSP 1 Score: 156 bits (395), Expect = 6.89e-45
Identity = 92/144 (63.89%), Postives = 102/144 (70.83%), Query Frame = 0
Query: 1 NNVGLESCGG-----MSEANYNPNQILWSKELKTYVLKSNNQTSLGSHDQVKGNIGIGN- 60
NN GL S GG MSEANYNP+QI+WSKELKTYVLKSNN L H + N
Sbjct: 97 NNHGLASSGGRSGEMMSEANYNPHQIVWSKELKTYVLKSNNFGQL--HPSLYCNTYPAKT 156
Query: 61 -GSTTNNLANVPLQTNSNDLYTLLNPASRSTDDHEDETSSGS-RRKASRLRRVSH-DEPE 120
GST N + N+PLQ +ND YTLLNPA R TDDHE E SSG RR+ + RRVS +E E
Sbjct: 157 IGSTANGMPNLPLQNYNNDQYTLLNPACRKTDDHEAEASSGGGRRRGLQRRRVSACNEVE 216
Query: 121 KRCTNYNCNTNFTPMWRKGPLGPK 135
+RCTNYNCNTNFTPMWRKGPLGPK
Sbjct: 217 RRCTNYNCNTNFTPMWRKGPLGPK 238
BLAST of MC02g0074 vs. ExPASy TrEMBL
Match:
A0A0A0L0J0 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G286370 PE=4 SV=1)
HSP 1 Score: 143 bits (361), Expect = 7.55e-41
Identity = 87/143 (60.84%), Postives = 97/143 (67.83%), Query Frame = 0
Query: 1 NNVGLESCGGM-SEANYN-PNQILWSKELKTYVLKSNNQTSLGSHDQVKGNIGIGNG--- 60
NN GL M SE NYN P+QI+WSK+LKTYVLKSNN H N
Sbjct: 7 NNQGLTRNNEMMSEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSYPNTHQAKPIPT 66
Query: 61 STTNNLANVPL--QTNSNDLYTLLNPASRSTDDHEDETSSGSRRKASRLRRVSH-DEPEK 120
ST NN N+PL + ++NDLYTLLNPASR DDHE E SS RRK SR RRVS ++ E+
Sbjct: 67 STPNNTPNLPLPKRGHNNDLYTLLNPASRVADDHEAEASSAGRRKGSRRRRVSATNDVER 126
Query: 121 RCTNYNCNTNFTPMWRKGPLGPK 135
RCTNYNCNTNFTPMWRKGPLGPK
Sbjct: 127 RCTNYNCNTNFTPMWRKGPLGPK 149
BLAST of MC02g0074 vs. ExPASy TrEMBL
Match:
A0A5A7TDI3 (GATA transcription factor 29-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00190 PE=4 SV=1)
HSP 1 Score: 145 bits (366), Expect = 7.98e-41
Identity = 86/145 (59.31%), Postives = 99/145 (68.28%), Query Frame = 0
Query: 1 NNVGLESCGGM-SEANYNPNQILWSKELKTYVLKSNNQTSLGSHD------QVKGNIGIG 60
NN GL M SE NYNP+QI+WSK+LKTYVLKSNN L Q K I
Sbjct: 71 NNQGLARNNEMMSEPNYNPHQIVWSKDLKTYVLKSNNYGQLHPSSYSTTTHQAKP---IA 130
Query: 61 NGSTTNNLANVPL--QTNSNDLYTLLNPASRSTDDHEDETSSGSRRKASRLRRVSH-DEP 120
+ N+ N+PL + ++NDLYTLLNPASR +DDHE E SSG RRK SR RR S ++
Sbjct: 131 TSTPNNSTPNLPLPKKGHNNDLYTLLNPASRISDDHEAEASSGGRRKGSRRRRASATNDV 190
Query: 121 EKRCTNYNCNTNFTPMWRKGPLGPK 135
E+RCTNYNCNTNFTPMWRKGPLGPK
Sbjct: 191 ERRCTNYNCNTNFTPMWRKGPLGPK 212
BLAST of MC02g0074 vs. TAIR 10
Match:
AT3G20750.1 (GATA transcription factor 29 )
HSP 1 Score: 44.7 bits (104), Expect = 7.0e-05
Identity = 25/73 (34.25%), Postives = 38/73 (52.05%), Query Frame = 0
Query: 71 NDLYTLLNPASRSTDDHEDETSSGSRRKASRLRRV--------SHDEPEKRCTNYNCNTN 130
+D Y L++ +R + + S ++ + +R+ E K+CTN NCN
Sbjct: 108 SDEYVLIDVPARRARRNNSTVMTNSWKENATPKRIRGCGGFCGGRIEGMKKCTNMNCNAL 167
Query: 131 FTPMWRKGPLGPK 136
TPMWR+GPLGPK
Sbjct: 168 NTPMWRRGPLGPK 180
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q9LT45 | 9.9e-04 | 34.25 | GATA transcription factor 29 OS=Arabidopsis thaliana OX=3702 GN=GATA29 PE=2 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_022153837.1 | 4.88e-92 | 100.00 | GATA transcription factor 29 [Momordica charantia] >XP_022153838.1 GATA transcri... | [more] |
| XP_022985849.1 | 1.07e-46 | 65.03 | GATA zinc finger domain-containing protein 8-like [Cucurbita maxima] | [more] |
| XP_023522473.1 | 1.18e-46 | 64.58 | GATA transcription factor 21-like [Cucurbita pepo subsp. pepo] | [more] |
| XP_038902274.1 | 9.37e-46 | 62.86 | putative GATA transcription factor 22 [Benincasa hispida] | [more] |
| XP_023513295.1 | 1.77e-45 | 64.58 | putative GATA transcription factor 22 [Cucurbita pepo subsp. pepo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1DIM0 | 2.36e-92 | 100.00 | GATA transcription factor 29 OS=Momordica charantia OX=3673 GN=LOC111021259 PE=4... | [more] |
| A0A6J1JEF0 | 5.20e-47 | 65.03 | GATA zinc finger domain-containing protein 8-like OS=Cucurbita maxima OX=3661 GN... | [more] |
| A0A6J1FTP0 | 6.89e-45 | 63.89 | GATA zinc finger domain-containing protein 8-like OS=Cucurbita moschata OX=3662 ... | [more] |
| A0A0A0L0J0 | 7.55e-41 | 60.84 | GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G286370 P... | [more] |
| A0A5A7TDI3 | 7.98e-41 | 59.31 | GATA transcription factor 29-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT3G20750.1 | 7.0e-05 | 34.25 | GATA transcription factor 29 | [more] |
