MC02g0043 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC02g0043
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Chlororespiratory reduction 42
Location	MC02: 407263 .. 408481 (-)
RNA-Seq Expression	MC02g0043
Synteny	MC02g0043

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAATGATTATAGACTAAATTAAAAGAGTACAAAAAATACAAGGAACTCAAATAAATAAATAAATAAATATATATATATATATATTAGAGAAAACTATTGAAACGTGGAAAAAGGAAATCAACAATAAATTTTAATCCTTTCCCAAACAGGTCCTTGAATTGATACGCTGGCGATAAGATACCATTCCAATGGCTGCTTCGCTTTCTGCTGCTACCGCAATTCCACGCCCAAGCATTAGCATCATCAATTCAATCTCTTCATTCAACTTCTCCAACTGCTTAAGCACCGGTATTCAACCGCGAAGCTTCGTCATCAAGTGTGAATCAAGTGCATCGGCAGCGGACGAGACGCCGCCGGCAAAGAGCCGGAAACTCGAGATCGGCTCCCCCGTAATCGTAGTCGAGGCTCCCAAAATGATAAAGACCGCAGCCTCAGTTCCATGCCTGCGGGTCAATTCCGGCATAATCAACCCCGGCGACGTTGGCAGGTGAGTGGCCGATCGGCCGTCCTCCTCTCTCTTCGGCATTTCTTCGAACATATTATGTGCGTCGCCTGTAACCAATTCCTGTTGCGTTGCCCTAACATGTATGCTCGAACAGAATCGTGTCGAGAAAACCTAAAGACGTGTGGGCCGTGCGGCTTAAAGTGGGGACTTACCTCATCGATGGAAGGTATTTTAAACCATTAGAGCTCGATCAGTAGCTTTATGAGGCCGAATAGGGGTTCAATTTGAAGGTTCTGAGTTTCGAAATCCACCTTCCATTTTCATTTCCTTTTTATTGATTGGGATGAATGGATGATGATCTTGTTATGCAGACCACTGTCCATATCTATGCCATGGAATCCTAACTCGATTTCTTGATGCAGCAGAAATGCGACTTAACCATACATTTAGGAGTCTCCGTCCGGAATAATTCGTAGGTTTTCCCCCTTTTTAATAATTCGTAGTTCTACGATAGTATATTGACTTCGTGGAATTCACGATAAAATTCAAACTATTAAGTATACATATTAATTTATCAACGGAAAGCTTACTTGAGCATCCTCATTTATTTATTAGTAAAAGTTGTAATGCACGGAAGAAAAATTCAACTTCGGGGTAGAGATTTCAAACATTGATGTTATAATTACTTAACTAGTCAAGTGATGCAAGACAACTTTTATTTATTTTAAATCATGCCTAGTTCATAATATTCAGTAATGAAGGGTTAATAATCT

mRNA sequence

CCAATGATTATAGACTAAATTAAAAGAGTACAAAAAATACAAGGAACTCAAATAAATAAATAAATAAATATATATATATATATATTAGAGAAAACTATTGAAACGTGGAAAAAGGAAATCAACAATAAATTTTAATCCTTTCCCAAACAGGTCCTTGAATTGATACGCTGGCGATAAGATACCATTCCAATGGCTGCTTCGCTTTCTGCTGCTACCGCAATTCCACGCCCAAGCATTAGCATCATCAATTCAATCTCTTCATTCAACTTCTCCAACTGCTTAAGCACCGGTATTCAACCGCGAAGCTTCGTCATCAAGTGTGAATCAAGTGCATCGGCAGCGGACGAGACGCCGCCGGCAAAGAGCCGGAAACTCGAGATCGGCTCCCCCGTAATCGTAGTCGAGGCTCCCAAAATGATAAAGACCGCAGCCTCAGTTCCATGCCTGCGGGTCAATTCCGGCATAATCAACCCCGGCGACGTTGGCAGAATCGTGTCGAGAAAACCTAAAGACGTGTGGGCCGTGCGGCTTAAAGTGGGGACTTACCTCATCGATGGAAGACCACTGTCCATATCTATGCCATGGAATCCTAACTCGATTTCTTGATGCAGCAGAAATGCGACTTAACCATACATTTAGGAGTCTCCGTCCGGAATAATTCGTAGGTTTTCCCCCTTTTTAATAATTCGTAGTTCTACGATAGTATATTGACTTCGTGGAATTCACGATAAAATTCAAACTATTAAGTATACATATTAATTTATCAACGGAAAGCTTACTTGAGCATCCTCATTTATTTATTAGTAAAAGTTGTAATGCACGGAAGAAAAATTCAACTTCGGGGTAGAGATTTCAAACATTGATGTTATAATTACTTAACTAGTCAAGTGATGCAAGACAACTTTTATTTATTTTAAATCATGCCTAGTTCATAATATTCAGTAATGAAGGGTTAATAATCT

Coding sequence (CDS)

ATGGCTGCTTCGCTTTCTGCTGCTACCGCAATTCCACGCCCAAGCATTAGCATCATCAATTCAATCTCTTCATTCAACTTCTCCAACTGCTTAAGCACCGGTATTCAACCGCGAAGCTTCGTCATCAAGTGTGAATCAAGTGCATCGGCAGCGGACGAGACGCCGCCGGCAAAGAGCCGGAAACTCGAGATCGGCTCCCCCGTAATCGTAGTCGAGGCTCCCAAAATGATAAAGACCGCAGCCTCAGTTCCATGCCTGCGGGTCAATTCCGGCATAATCAACCCCGGCGACGTTGGCAGAATCGTGTCGAGAAAACCTAAAGACGTGTGGGCCGTGCGGCTTAAAGTGGGGACTTACCTCATCGATGGAAGACCACTGTCCATATCTATGCCATGGAATCCTAACTCGATTTCTTGA

Protein sequence

MAASLSAATAIPRPSISIINSISSFNFSNCLSTGIQPRSFVIKCESSASAADETPPAKSRKLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWAVRLKVGTYLIDGRPLSISMPWNPNSIS

Homology

[Close]

BLAST of MC02g0043 vs. NCBI nr
Match: XP_022153826.1 (uncharacterized protein LOC111021250 [Momordica charantia])

HSP 1 Score: 264 bits (674), Expect = 1.14e-88
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MAASLSAATAIPRPSISIINSISSFNFSNCLSTGIQPRSFVIKCESSASAADETPPAKSR 60
           MAASLSAATAIPRPSISIINSISSFNFSNCLSTGIQPRSFVIKCESSASAADETPPAKSR
Sbjct: 1   MAASLSAATAIPRPSISIINSISSFNFSNCLSTGIQPRSFVIKCESSASAADETPPAKSR 60

Query: 61  KLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWAVRLKVGTYL 120
           KLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWAVRLKVGTYL
Sbjct: 61  KLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWAVRLKVGTYL 120

Query: 121 IDGRPLSISMPWNPNSIS 138
           IDGRPLSISMPWNPNSIS
Sbjct: 121 IDGRPLSISMPWNPNSIS 138

[Close]

BLAST of MC02g0043 vs. NCBI nr
Match: XP_022985824.1 (uncharacterized protein LOC111483753 [Cucurbita maxima])

HSP 1 Score: 203 bits (516), Expect = 1.22e-64
Identity = 113/126 (89.68%), Postives = 115/126 (91.27%), Query Frame = 0


Query: 1   MAASLSAATAIPRPSISI--INSISSFNFSNCLSTGIQPRSFVIKCESSASAADETPPAK 60
           MA SLS+ATAIPRPSI I  +NSISSFN SN LST  QPRSFV KCESSASAAD TPPAK
Sbjct: 1   MATSLSSATAIPRPSIGIGIVNSISSFNISNSLSTRSQPRSFV-KCESSASAADPTPPAK 60

Query: 61  SRKLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWAVRLKVGT 120
           SRKLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVW VRLKVGT
Sbjct: 61  SRKLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWGVRLKVGT 120

Query: 121 YLIDGR 124
           YLIDGR
Sbjct: 121 YLIDGR 125

[Close]

BLAST of MC02g0043 vs. NCBI nr
Match: XP_023513105.1 (uncharacterized protein LOC111777646 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 198 bits (504), Expect = 8.20e-63
Identity = 111/126 (88.10%), Postives = 114/126 (90.48%), Query Frame = 0


Query: 1   MAASLSAATAIPRPSISI--INSISSFNFSNCLSTGIQPRSFVIKCESSASAADETPPAK 60
           MA SLS+ATAIPRPSI I  ++SISSFN SN LST  QPRS V KCESSASAAD TPPAK
Sbjct: 1   MATSLSSATAIPRPSIGIGIVSSISSFNVSNSLSTRSQPRSLV-KCESSASAADPTPPAK 60

Query: 61  SRKLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWAVRLKVGT 120
           SRKLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVW VRLKVGT
Sbjct: 61  SRKLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWGVRLKVGT 120

Query: 121 YLIDGR 124
           YLIDGR
Sbjct: 121 YLIDGR 125

[Close]

BLAST of MC02g0043 vs. NCBI nr
Match: XP_022944245.1 (uncharacterized protein LOC111448751 [Cucurbita moschata])

HSP 1 Score: 195 bits (496), Expect = 1.36e-61
Identity = 110/126 (87.30%), Postives = 113/126 (89.68%), Query Frame = 0


Query: 1   MAASLSAATAIPRPSISI--INSISSFNFSNCLSTGIQPRSFVIKCESSASAADETPPAK 60
           MA SLS+ATAIPRPSI I  ++SISSFN SN LST  QPRS V KCESSASAAD TPPAK
Sbjct: 1   MATSLSSATAIPRPSIGIGIVSSISSFNVSNSLSTRSQPRSLV-KCESSASAADPTPPAK 60

Query: 61  SRKLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWAVRLKVGT 120
           S KLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVW VRLKVGT
Sbjct: 61  SWKLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWGVRLKVGT 120

Query: 121 YLIDGR 124
           YLIDGR
Sbjct: 121 YLIDGR 125

[Close]

BLAST of MC02g0043 vs. NCBI nr
Match: KAG6570328.1 (hypothetical protein SDJN03_29243, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010222.1 hypothetical protein SDJN02_27014, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 195 bits (496), Expect = 1.36e-61
Identity = 110/126 (87.30%), Postives = 113/126 (89.68%), Query Frame = 0


Query: 1   MAASLSAATAIPRPSISI--INSISSFNFSNCLSTGIQPRSFVIKCESSASAADETPPAK 60
           MA SLS+ATAIPRPSI I  ++SISSFN SN LST  QPRS V KCESSASAAD TPPAK
Sbjct: 1   MATSLSSATAIPRPSIGIGTVSSISSFNVSNSLSTRSQPRSLV-KCESSASAADPTPPAK 60

Query: 61  SRKLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWAVRLKVGT 120
           S KLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVW VRLKVGT
Sbjct: 61  SWKLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWGVRLKVGT 120

Query: 121 YLIDGR 124
           YLIDGR
Sbjct: 121 YLIDGR 125

[Close]

BLAST of MC02g0043 vs. ExPASy TrEMBL
Match: A0A6J1DLV6 (uncharacterized protein LOC111021250 OS=Momordica charantia OX=3673 GN=LOC111021250 PE=4 SV=1)

HSP 1 Score: 264 bits (674), Expect = 5.51e-89
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MAASLSAATAIPRPSISIINSISSFNFSNCLSTGIQPRSFVIKCESSASAADETPPAKSR 60
           MAASLSAATAIPRPSISIINSISSFNFSNCLSTGIQPRSFVIKCESSASAADETPPAKSR
Sbjct: 1   MAASLSAATAIPRPSISIINSISSFNFSNCLSTGIQPRSFVIKCESSASAADETPPAKSR 60

Query: 61  KLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWAVRLKVGTYL 120
           KLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWAVRLKVGTYL
Sbjct: 61  KLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWAVRLKVGTYL 120

Query: 121 IDGRPLSISMPWNPNSIS 138
           IDGRPLSISMPWNPNSIS
Sbjct: 121 IDGRPLSISMPWNPNSIS 138

[Close]

BLAST of MC02g0043 vs. ExPASy TrEMBL
Match: A0A6J1JEC4 (uncharacterized protein LOC111483753 OS=Cucurbita maxima OX=3661 GN=LOC111483753 PE=4 SV=1)

HSP 1 Score: 203 bits (516), Expect = 5.90e-65
Identity = 113/126 (89.68%), Postives = 115/126 (91.27%), Query Frame = 0


Query: 1   MAASLSAATAIPRPSISI--INSISSFNFSNCLSTGIQPRSFVIKCESSASAADETPPAK 60
           MA SLS+ATAIPRPSI I  +NSISSFN SN LST  QPRSFV KCESSASAAD TPPAK
Sbjct: 1   MATSLSSATAIPRPSIGIGIVNSISSFNISNSLSTRSQPRSFV-KCESSASAADPTPPAK 60

Query: 61  SRKLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWAVRLKVGT 120
           SRKLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVW VRLKVGT
Sbjct: 61  SRKLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWGVRLKVGT 120

Query: 121 YLIDGR 124
           YLIDGR
Sbjct: 121 YLIDGR 125

[Close]

BLAST of MC02g0043 vs. ExPASy TrEMBL
Match: A0A6J1FYJ7 (uncharacterized protein LOC111448751 OS=Cucurbita moschata OX=3662 GN=LOC111448751 PE=4 SV=1)

HSP 1 Score: 195 bits (496), Expect = 6.57e-62
Identity = 110/126 (87.30%), Postives = 113/126 (89.68%), Query Frame = 0


Query: 1   MAASLSAATAIPRPSISI--INSISSFNFSNCLSTGIQPRSFVIKCESSASAADETPPAK 60
           MA SLS+ATAIPRPSI I  ++SISSFN SN LST  QPRS V KCESSASAAD TPPAK
Sbjct: 1   MATSLSSATAIPRPSIGIGIVSSISSFNVSNSLSTRSQPRSLV-KCESSASAADPTPPAK 60

Query: 61  SRKLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWAVRLKVGT 120
           S KLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVW VRLKVGT
Sbjct: 61  SWKLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWGVRLKVGT 120

Query: 121 YLIDGR 124
           YLIDGR
Sbjct: 121 YLIDGR 125

[Close]

BLAST of MC02g0043 vs. ExPASy TrEMBL
Match: A0A5A7T9E1 (Chlororespiratory reduction 42 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00650 PE=4 SV=1)

HSP 1 Score: 189 bits (480), Expect = 1.74e-59
Identity = 105/125 (84.00%), Postives = 111/125 (88.80%), Query Frame = 0


Query: 1   MAASLSAATAIPRPSISIINSISSFNFSNCLSTGIQPRSFVIKCESSASAAD-ETPPAKS 60
           MAAS S  T I RPSI  + SISSFN SN LST  QPRS ++KCESSASAAD +TPPAKS
Sbjct: 1   MAASFSPTTPISRPSIRTLTSISSFNVSNNLSTRSQPRS-IVKCESSASAADGQTPPAKS 60

Query: 61  RKLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWAVRLKVGTY 120
           +KLEIGSPVIV+EAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWAVRLKVGTY
Sbjct: 61  QKLEIGSPVIVIEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWAVRLKVGTY 120

Query: 121 LIDGR 124
           LIDGR
Sbjct: 121 LIDGR 124

[Close]

BLAST of MC02g0043 vs. ExPASy TrEMBL
Match: A0A1S3BMX2 (uncharacterized protein LOC103491596 OS=Cucumis melo OX=3656 GN=LOC103491596 PE=4 SV=1)

HSP 1 Score: 189 bits (480), Expect = 1.74e-59
Identity = 105/125 (84.00%), Postives = 111/125 (88.80%), Query Frame = 0


Query: 1   MAASLSAATAIPRPSISIINSISSFNFSNCLSTGIQPRSFVIKCESSASAAD-ETPPAKS 60
           MAAS S  T I RPSI  + SISSFN SN LST  QPRS ++KCESSASAAD +TPPAKS
Sbjct: 1   MAASFSPTTPISRPSIRTLTSISSFNVSNNLSTRSQPRS-IVKCESSASAADGQTPPAKS 60

Query: 61  RKLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWAVRLKVGTY 120
           +KLEIGSPVIV+EAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWAVRLKVGTY
Sbjct: 61  QKLEIGSPVIVIEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVWAVRLKVGTY 120

Query: 121 LIDGR 124
           LIDGR
Sbjct: 121 LIDGR 124

[Close]

BLAST of MC02g0043 vs. TAIR 10
Match: AT5G20935.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3148 (InterPro:IPR021495); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 117.9 bits (294), Expect = 6.6e-27
Identity = 54/74 (72.97%), Postives = 67/74 (90.54%), Query Frame = 0


Query: 51  ADETPPAKSRKLEIGSPVIVVEAPKMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDVW 110
           A+E P  KS KL++GSP+I+VEAPK+IKTAAS+PCLR NSG++ PGDVGRIVSRKPKD+W
Sbjct: 23  ANEAPRPKS-KLQVGSPIIIVEAPKVIKTAASMPCLRANSGLVKPGDVGRIVSRKPKDLW 82

Query: 111 AVRLKVGTYLIDGR 125
           AVRL +GTYL+DG+
Sbjct: 83  AVRLSIGTYLLDGK 95

The following BLAST results are available for this feature:

BLAST of MC02g0043 vs.


Match Name	E-value	Identity	Description

BLAST of MC02g0043 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153826.1	1.14e-88	100.00	uncharacterized protein LOC111021250 [Momordica charantia]	[more]
XP_022985824.1	1.22e-64	89.68	uncharacterized protein LOC111483753 [Cucurbita maxima]	[more]
XP_023513105.1	8.20e-63	88.10	uncharacterized protein LOC111777646 [Cucurbita pepo subsp. pepo]	[more]
XP_022944245.1	1.36e-61	87.30	uncharacterized protein LOC111448751 [Cucurbita moschata]	[more]
KAG6570328.1	1.36e-61	87.30	hypothetical protein SDJN03_29243, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MC02g0043 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DLV6	5.51e-89	100.00	uncharacterized protein LOC111021250 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
A0A6J1JEC4	5.90e-65	89.68	uncharacterized protein LOC111483753 OS=Cucurbita maxima OX=3661 GN=LOC111483753...	[more]
A0A6J1FYJ7	6.57e-62	87.30	uncharacterized protein LOC111448751 OS=Cucurbita moschata OX=3662 GN=LOC1114487...	[more]
A0A5A7T9E1	1.74e-59	84.00	Chlororespiratory reduction 42 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3BMX2	1.74e-59	84.00	uncharacterized protein LOC103491596 OS=Cucumis melo OX=3656 GN=LOC103491596 PE=...	[more]

BLAST of MC02g0043 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20935.1	6.6e-27	72.97	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3148...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021495	Protein of unknown function DUF3148	PFAM	PF11347	DUF3148	coord: 64..124 e-value: 6.5E-24 score: 83.5
IPR021495	Protein of unknown function DUF3148	PANTHER	PTHR36799	FAMILY NOT NAMED	coord: 22..124
None	No IPR available	PANTHER	PTHR36799:SF2	DUF3148 FAMILY PROTEIN	coord: 22..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC02g0043.1	MC02g0043.1	mRNA