MC01g_new0335 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC01g_new0335
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRibosomal protein S1
LocationMC01: 13789090 .. 13790339 (+)
RNA-Seq ExpressionMC01g_new0335
SyntenyMC01g_new0335
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGCCACTCCTTCTGAGGAGGCCCTATTTATTGGCCCATTACTTGTCCTACGAGGAGGACCCTGATGTAGTCAGGTTTGTCTACGAGGAACTTCAAAGAGCAGCCACACTTGGAGCCTACGACGAAGCACTGCGTAGGTTTCTTAAGGCAGGGATGCTTCTGGAGCTAAAAGGAAAAAAATAGAATTGATTTCACAGCTCCTCTTTGCCCCCTATCTAGTCTAGTTCTATTCTAGTAAGGCTTTGATTTACGAGGTTCTGAATACTGCATTTCTTACTTAATGGATGCACTAATGGATGAGGGGTCGCGTGGGCAATTCCTGAATATCGAGAGAACGTTGATCAATATTCAGGAAGAGATCGAGGATCCTGATCTTTGTCAACACAAGACTCGGAGCCCCCTGCTCAAACAAAAAAGCCTTCGGAATTGAAAATGCCTTTCGGATTTATTCTCGTGGAGGGGAGAAGACTCATTTTTCATTCGAGATAGGGGGGAGCTATTGTGAAGCCTAGAGAGGCGGAAGCGGCAAATCGCTTCTACCGAGTTCCCCAACAGCTGCTTAGTAGCTCAACTCTTTCGACAGGCGTGACGCTGCTGGATGCTTCTGATCAATAGGAAGAGGAGGAAAAAAAAAGCTTATGATGAGCATCTATTTGAGTCGATCATTTCCAAGATCTAATTCGAGTTTTTTCTTATGTAGTGGAAACGCCTTACAATCTGAAGTTTTACGCTTAAGGGAAGAAATGTTCTTGGTGGATGCAGGACCTGGGACCCCCAGAATTTGTATGCAAGATGAGCCTACAGGAGTGCCAATCAACCGAGCCGCCAGGTTTGAGAATAAGGTGGGATCCCTGGATCTAGTGGCCGGTGAATCACTGATCAAAGAGCAAATTTTGGAGAGATTCTTCATCGATCTAGTGGCCGGCGAATCACTGATCGGCGAGCGAGCTGCCGCCAGGTTTAATGATTTGGTGGGATCCACAGATGTAGTGGCTGGTGAACCGCTTTTTCTTCTTCCACGAAGATTCAGACAAAACCGAGCTTGGATGGAACTGAACAAGATTGGGCAAACGAATACAAAGGTCAAAGGCTTTATTATTGATAAAGTAAAAGGAGGTTATTCAGTAGCCATCGCGGGTTTCATTACTTTTCTTCCATTCCGTCCTCTCATAAGTCAAAGGATATCGAATGATCGATTCACCATTGAGAGCATTAACCCCAAAAGAACGAATATTGTGGTGTTCTAA

mRNA sequence

ATGCGGCCACTCCTTCTGAGGAGGCCCTATTTATTGGCCCATTACTTGTCCTACGAGGAGGACCCTGATGTAGTCAGGTTTGTCTACGAGGAACTTCAAAGAGCAGCCACACTTGGAGCCTACGACGAAGCACTGCGTAGTGGAAACGCCTTACAATCTGAAGTTTTACGCTTAAGGGAAGAAATGTTCTTGGTGGATGCAGGACCTGGGACCCCCAGAATTTGTATGCAAGATGAGCCTACAGGAGTGCCAATCAACCGAGCCGCCAGGTTTGAGAATAAGGTGGGATCCCTGGATCTAGTGGCCGGTGAATCACTGATCAAAGAGCAAATTTTGGAGAGATTCTTCATCGATCTAGTGGCCGGCGAATCACTGATCGGCGAGCGAGCTGCCGCCAGGTTTAATGATTTGGTGGGATCCACAGATGTAGTGGCTGGTGAACCGCTTTTTCTTCTTCCACGAAGATTCAGACAAAACCGAGCTTGGATGGAACTGAACAAGATTGGGCAAACGAATACAAAGGTCAAAGGCTTTATTATTGATAAAGTAAAAGGAGGTTATTCAGTAGCCATCGCGGGTTTCATTACTTTTCTTCCATTCCGTCCTCTCATAAGTCAAAGGATATCGAATGATCGATTCACCATTGAGAGCATTAACCCCAAAAGAACGAATATTGTGGTGTTCTAA

Coding sequence (CDS)

ATGCGGCCACTCCTTCTGAGGAGGCCCTATTTATTGGCCCATTACTTGTCCTACGAGGAGGACCCTGATGTAGTCAGGTTTGTCTACGAGGAACTTCAAAGAGCAGCCACACTTGGAGCCTACGACGAAGCACTGCGTAGTGGAAACGCCTTACAATCTGAAGTTTTACGCTTAAGGGAAGAAATGTTCTTGGTGGATGCAGGACCTGGGACCCCCAGAATTTGTATGCAAGATGAGCCTACAGGAGTGCCAATCAACCGAGCCGCCAGGTTTGAGAATAAGGTGGGATCCCTGGATCTAGTGGCCGGTGAATCACTGATCAAAGAGCAAATTTTGGAGAGATTCTTCATCGATCTAGTGGCCGGCGAATCACTGATCGGCGAGCGAGCTGCCGCCAGGTTTAATGATTTGGTGGGATCCACAGATGTAGTGGCTGGTGAACCGCTTTTTCTTCTTCCACGAAGATTCAGACAAAACCGAGCTTGGATGGAACTGAACAAGATTGGGCAAACGAATACAAAGGTCAAAGGCTTTATTATTGATAAAGTAAAAGGAGGTTATTCAGTAGCCATCGCGGGTTTCATTACTTTTCTTCCATTCCGTCCTCTCATAAGTCAAAGGATATCGAATGATCGATTCACCATTGAGAGCATTAACCCCAAAAGAACGAATATTGTGGTGTTCTAA

Protein sequence

MRPLLLRRPYLLAHYLSYEEDPDVVRFVYEELQRAATLGAYDEALRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTNIVVF
Homology
[Close]
BLAST of MC01g_new0335 vs. ExPASy Swiss-Prot
Match: P26863 (Ribosomal protein S1, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS1 PE=3 SV=2)

HSP 1 Score: 89.4 bits (220), Expect = 5.9e-17
Identity = 65/189 (34.39%), Postives = 92/189 (48.68%), Query Frame = 0 

Query: 48  GNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGESLI 107
           G+A+Q  V++L++   LVD G  TP IC Q E   VPI + ARF                
Sbjct: 19  GSAIQCSVIQLQQNKVLVDTGLKTPIICFQHELKRVPITKQARFH--------------- 78

Query: 108 KEQILERFFIDLVAGESLIGERAAARFNDLVGSTDV-VAGEPLFLLPR----RFRQNRAW 167
                                          G  DV V GEP  LLP+    + ++   W
Sbjct: 79  ------------------------------FGIEDVEVFGEPKMLLPKPLEIKCKRKLVW 138

Query: 168 MELNKIGQTNTK-VKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDR---FTIESI 227
           +EL KI +++   VKGFI++ VKGGY+VAIAG+I FLP   L S+++   +   F+I ++
Sbjct: 139 IELTKIWRSDQNLVKGFILNSVKGGYAVAIAGYIAFLPKSLLRSRKVFYSQWRIFSILNM 162

[Close]
BLAST of MC01g_new0335 vs. ExPASy Swiss-Prot
Match: P57395 (30S ribosomal protein S1 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) OX=107806 GN=rpsA PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.3e-05
Identity = 47/191 (24.61%), Postives = 80/191 (41.88%), Query Frame = 0 

Query: 46  RSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGES 105
           R G+ ++  ++ + ++M LVDAG       ++ E + +P+    +F+N  G LD+  G+ 
Sbjct: 19  RPGSIIRGTIVSIEKDMVLVDAG-------LKSE-SAIPVE---QFQNSQGLLDIQVGDQ 78

Query: 106 L-IKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRAWME 165
           + +    +E  F     GE+L+    A R                         + AW+ 
Sbjct: 79  IDVALDAIEDGF-----GETLLSREKAKR-------------------------HEAWLI 138

Query: 166 LNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFL--------PFRPLISQRISNDRFTIE 225
           L K  + +  V G I  KVKGG++V +     FL        P R  I        F + 
Sbjct: 139 LEKAHEKSETVIGIINGKVKGGFTVELNDIRAFLPGSLVDVRPVRDTIHLEGKELEFKVI 168

Query: 226 SINPKRTNIVV 228
            ++ KR N+VV
Sbjct: 199 KLDQKRNNVVV 168

[Close]
BLAST of MC01g_new0335 vs. ExPASy Swiss-Prot
Match: P37985 (30S ribosomal protein S1 OS=Dickeya dadantii (strain 3937) OX=198628 GN=rpsA PE=3 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 8.8e-05
Identity = 46/191 (24.08%), Postives = 83/191 (43.46%), Query Frame = 0 

Query: 46  RSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGES 105
           R G+ ++  V+ + +++ LVDAG       ++ E + +P+    +F+N  G +++  G+ 
Sbjct: 19  RPGSIVRGVVVAIDKDVVLVDAG-------LKSE-SAIPVE---QFKNAQGEIEIQVGDE 78

Query: 106 LIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRAWMEL 165
           +          + L A E   GE   +R                     + +++ AW+ L
Sbjct: 79  V---------DVALDAVEDGFGETLLSR--------------------EKAKRHEAWLML 138

Query: 166 NKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISND---------RFTIE 225
            K  + +  V G I  KVKGG++V + G   FLP   L+  R   D          F + 
Sbjct: 139 EKAYEESATVTGVINGKVKGGFTVELNGIRAFLP-GSLVDVRPVRDTLHLEGKELEFKVI 168

Query: 226 SINPKRTNIVV 228
            ++ KR N+VV
Sbjct: 199 KLDQKRNNVVV 168

[Close]
BLAST of MC01g_new0335 vs. ExPASy Swiss-Prot
Match: Q6NDP1 (30S ribosomal protein S1 OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) OX=258594 GN=rpsA PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.2e-04
Identity = 29/79 (36.71%), Postives = 47/79 (59.49%), Query Frame = 0 

Query: 157 RQNRAWMELNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLP-----FRPL--ISQRIS 216
           R+  +W +L K  Q N KV G I ++VKGG++V + G + FLP      RP+  ++  ++
Sbjct: 99  RREESWGKLEKAFQNNEKVFGVIFNQVKGGFTVDLDGAVAFLPRSQVDIRPIRDVAPLMN 158

Query: 217 NDR-FTIESINPKRTNIVV 228
           N + F I  ++ +R NIVV
Sbjct: 159 NSQPFQILKMDRRRGNIVV 177

[Close]
BLAST of MC01g_new0335 vs. ExPASy Swiss-Prot
Match: P0AG69 (30S ribosomal protein S1 OS=Escherichia coli O157:H7 OX=83334 GN=rpsA PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.5e-04
Identity = 48/191 (25.13%), Postives = 82/191 (42.93%), Query Frame = 0 

Query: 46  RSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGES 105
           R G+ ++  V+ + +++ LVDAG       ++ E + +P   A +F+N  G L++  G+ 
Sbjct: 19  RPGSIVRGVVVAIDKDVVLVDAG-------LKSE-SAIP---AEQFKNAQGELEIQVGDE 78

Query: 106 LIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRAWMEL 165
           +          + L A E   GE   +R                     + +++ AW+ L
Sbjct: 79  V---------DVALDAVEDGFGETLLSR--------------------EKAKRHEAWITL 138

Query: 166 NKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISND---------RFTIE 225
            K  +    V G I  KVKGG++V + G   FLP   L+  R   D          F + 
Sbjct: 139 EKAYEDAETVTGVINGKVKGGFTVELNGIRAFLP-GSLVDVRPVRDTLHLEGKELEFKVI 168

Query: 226 SINPKRTNIVV 228
            ++ KR N+VV
Sbjct: 199 KLDQKRNNVVV 168

[Close]
BLAST of MC01g_new0335 vs. NCBI nr
Match: XP_022974554.1 (uncharacterized protein LOC111473236 [Cucurbita maxima])

HSP 1 Score: 345 bits (886), Expect = 1.88e-118
Identity = 177/184 (96.20%), Postives = 179/184 (97.28%), Query Frame = 0 

Query: 45  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGE 104
           L SGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGE
Sbjct: 19  LCSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGE 78

Query: 105 SLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRAWME 164
           SLIKE ILERFFIDLVAGESLI ERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRAWME
Sbjct: 79  SLIKEPILERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRAWME 138

Query: 165 LNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTN 224
           LNKI QTNTKVKGFII+KVKGGYSVAIAGFITFLPFRPLISQRISN+RFTIESINPKRTN
Sbjct: 139 LNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNERFTIESINPKRTN 198

Query: 225 IVVF 228
           IVVF
Sbjct: 199 IVVF 202

[Close]
BLAST of MC01g_new0335 vs. NCBI nr
Match: YP_009706796.1 (ribosomal protein S1 [Ilex pubescens] >QEP49792.1 ribosomal protein S1 [Ilex pubescens])

HSP 1 Score: 345 bits (886), Expect = 1.88e-118
Identity = 177/184 (96.20%), Postives = 179/184 (97.28%), Query Frame = 0 

Query: 45  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGE 104
           L SGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGE
Sbjct: 19  LCSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGE 78

Query: 105 SLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRAWME 164
           SLIKEQILERFFIDLVAGESLI ERAAARFNDLVGSTDVVAGEPL LLPRRFRQNRAWME
Sbjct: 79  SLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLLLLPRRFRQNRAWME 138

Query: 165 LNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTN 224
           LNKI +TNTKVKGFII+KVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTN
Sbjct: 139 LNKIWRTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTN 198

Query: 225 IVVF 228
           IVVF
Sbjct: 199 IVVF 202

[Close]
BLAST of MC01g_new0335 vs. NCBI nr
Match: YP_009913648.1 (ribosomal protein S1 [Luffa acutangula] >QLJ93022.1 ribosomal protein S1 [Luffa acutangula])

HSP 1 Score: 342 bits (876), Expect = 5.65e-117
Identity = 178/184 (96.74%), Postives = 179/184 (97.28%), Query Frame = 0 

Query: 45  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGE 104
           L SGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGE
Sbjct: 18  LCSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGE 77

Query: 105 SLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRAWME 164
           SLIKEQILERFFIDLVAGESLI ERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRAWME
Sbjct: 78  SLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRAWME 137

Query: 165 LNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTN 224
           LNKI QTNTKVKGFII+KVKGGYSVAIAGFITFLPFR  ISQRISNDRFTIESINPKRTN
Sbjct: 138 LNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFR--ISQRISNDRFTIESINPKRTN 197

Query: 225 IVVF 228
           IVVF
Sbjct: 198 IVVF 199

[Close]
BLAST of MC01g_new0335 vs. NCBI nr
Match: QCB20452.1 (ribosomal protein S1 [Actinidia chinensis] >QCD14084.1 ribosomal protein S1 [Actinidia arguta] >QCD14111.1 ribosomal protein S1 [Actinidia eriantha])

HSP 1 Score: 341 bits (874), Expect = 1.27e-116
Identity = 175/184 (95.11%), Postives = 177/184 (96.20%), Query Frame = 0 

Query: 45  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGE 104
           L SGNALQS VLRLREEMFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGE
Sbjct: 19  LCSGNALQSSVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGE 78

Query: 105 SLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRAWME 164
           SLIKEQILERFFIDLVAGESLI ERAAARFNDLVGSTDVVAGEPL LLPRRFRQNRAWME
Sbjct: 79  SLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLLLLPRRFRQNRAWME 138

Query: 165 LNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTN 224
           LNKI +TNTKVKGFII+K KGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTN
Sbjct: 139 LNKIWRTNTKVKGFIIEKGKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTN 198

Query: 225 IVVF 228
           IVVF
Sbjct: 199 IVVF 202

[Close]
BLAST of MC01g_new0335 vs. NCBI nr
Match: YP_003587379.2 (ribosomal protein S1 [Cucurbita pepo] >ACV96689.2 ribosomal protein S1 [Cucurbita pepo])

HSP 1 Score: 340 bits (872), Expect = 2.47e-116
Identity = 174/184 (94.57%), Postives = 177/184 (96.20%), Query Frame = 0 

Query: 45  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGE 104
           LRSGNALQS VLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVG LDLVAGE
Sbjct: 18  LRSGNALQSSVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGFLDLVAGE 77

Query: 105 SLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRAWME 164
           SLIKE ILERFFIDLVAGESLI ERAAA FNDLVGSTDVVAGEPLF+LPRRFRQNRAWME
Sbjct: 78  SLIKEPILERFFIDLVAGESLIKERAAAGFNDLVGSTDVVAGEPLFILPRRFRQNRAWME 137

Query: 165 LNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTN 224
           LNKI QTNTKVKGFII+KVKGGYSVAIAGFITFLPFRPLISQRISN+RFTIESINPK TN
Sbjct: 138 LNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNERFTIESINPKTTN 197

Query: 225 IVVF 228
           IVVF
Sbjct: 198 IVVF 201

[Close]
BLAST of MC01g_new0335 vs. ExPASy TrEMBL
Match: A0A6J1IHY3 (uncharacterized protein LOC111473236 OS=Cucurbita maxima OX=3661 GN=LOC111473236 PE=4 SV=1)

HSP 1 Score: 345 bits (886), Expect = 9.11e-119
Identity = 177/184 (96.20%), Postives = 179/184 (97.28%), Query Frame = 0 

Query: 45  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGE 104
           L SGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGE
Sbjct: 19  LCSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGE 78

Query: 105 SLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRAWME 164
           SLIKE ILERFFIDLVAGESLI ERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRAWME
Sbjct: 79  SLIKEPILERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRAWME 138

Query: 165 LNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTN 224
           LNKI QTNTKVKGFII+KVKGGYSVAIAGFITFLPFRPLISQRISN+RFTIESINPKRTN
Sbjct: 139 LNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNERFTIESINPKRTN 198

Query: 225 IVVF 228
           IVVF
Sbjct: 199 IVVF 202

[Close]
BLAST of MC01g_new0335 vs. ExPASy TrEMBL
Match: A0A5C2I386 (Ribosomal protein S1 OS=Ilex pubescens OX=185543 GN=rps1 PE=4 SV=1)

HSP 1 Score: 345 bits (886), Expect = 9.11e-119
Identity = 177/184 (96.20%), Postives = 179/184 (97.28%), Query Frame = 0 

Query: 45  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGE 104
           L SGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGE
Sbjct: 19  LCSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGE 78

Query: 105 SLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRAWME 164
           SLIKEQILERFFIDLVAGESLI ERAAARFNDLVGSTDVVAGEPL LLPRRFRQNRAWME
Sbjct: 79  SLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLLLLPRRFRQNRAWME 138

Query: 165 LNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTN 224
           LNKI +TNTKVKGFII+KVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTN
Sbjct: 139 LNKIWRTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTN 198

Query: 225 IVVF 228
           IVVF
Sbjct: 199 IVVF 202

[Close]
BLAST of MC01g_new0335 vs. ExPASy TrEMBL
Match: A0A7D5Y132 (Ribosomal protein S1 OS=Luffa acutangula OX=56866 GN=rps1 PE=4 SV=1)

HSP 1 Score: 342 bits (876), Expect = 2.74e-117
Identity = 178/184 (96.74%), Postives = 179/184 (97.28%), Query Frame = 0 

Query: 45  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGE 104
           L SGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGE
Sbjct: 18  LCSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGE 77

Query: 105 SLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRAWME 164
           SLIKEQILERFFIDLVAGESLI ERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRAWME
Sbjct: 78  SLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRAWME 137

Query: 165 LNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTN 224
           LNKI QTNTKVKGFII+KVKGGYSVAIAGFITFLPFR  ISQRISNDRFTIESINPKRTN
Sbjct: 138 LNKIWQTNTKVKGFIIEKVKGGYSVAIAGFITFLPFR--ISQRISNDRFTIESINPKRTN 197

Query: 225 IVVF 228
           IVVF
Sbjct: 198 IVVF 199

[Close]
BLAST of MC01g_new0335 vs. ExPASy TrEMBL
Match: A0A4D6FU87 (Ribosomal protein S1 OS=Actinidia chinensis OX=3625 GN=rps1 PE=4 SV=1)

HSP 1 Score: 341 bits (874), Expect = 6.13e-117
Identity = 175/184 (95.11%), Postives = 177/184 (96.20%), Query Frame = 0 

Query: 45  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGE 104
           L SGNALQS VLRLREEMFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGE
Sbjct: 19  LCSGNALQSSVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGE 78

Query: 105 SLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRAWME 164
           SLIKEQILERFFIDLVAGESLI ERAAARFNDLVGSTDVVAGEPL LLPRRFRQNRAWME
Sbjct: 79  SLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLLLLPRRFRQNRAWME 138

Query: 165 LNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTN 224
           LNKI +TNTKVKGFII+K KGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTN
Sbjct: 139 LNKIWRTNTKVKGFIIEKGKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTN 198

Query: 225 IVVF 228
           IVVF
Sbjct: 199 IVVF 202

[Close]
BLAST of MC01g_new0335 vs. ExPASy TrEMBL
Match: A0A4D6J5C9 (Ribosomal protein S1 OS=Actinidia eriantha OX=165200 GN=rps1 PE=4 SV=1)

HSP 1 Score: 341 bits (874), Expect = 6.13e-117
Identity = 175/184 (95.11%), Postives = 177/184 (96.20%), Query Frame = 0 

Query: 45  LRSGNALQSEVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRAARFENKVGSLDLVAGE 104
           L SGNALQS VLRLREEMFLVDAGPGTPRICMQDEPTGVPINRA RFENKVGSLDLVAGE
Sbjct: 19  LCSGNALQSSVLRLREEMFLVDAGPGTPRICMQDEPTGVPINRATRFENKVGSLDLVAGE 78

Query: 105 SLIKEQILERFFIDLVAGESLIGERAAARFNDLVGSTDVVAGEPLFLLPRRFRQNRAWME 164
           SLIKEQILERFFIDLVAGESLI ERAAARFNDLVGSTDVVAGEPL LLPRRFRQNRAWME
Sbjct: 79  SLIKEQILERFFIDLVAGESLIKERAAARFNDLVGSTDVVAGEPLLLLPRRFRQNRAWME 138

Query: 165 LNKIGQTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTN 224
           LNKI +TNTKVKGFII+K KGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTN
Sbjct: 139 LNKIWRTNTKVKGFIIEKGKGGYSVAIAGFITFLPFRPLISQRISNDRFTIESINPKRTN 198

Query: 225 IVVF 228
           IVVF
Sbjct: 199 IVVF 202

The following BLAST results are available for this feature:
BLAST of MC01g_new0335 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P268635.9e-1734.39Ribosomal protein S1, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS1 PE=... [more]
P573952.3e-0524.6130S ribosomal protein S1 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (stra... [more]
P379858.8e-0524.0830S ribosomal protein S1 OS=Dickeya dadantii (strain 3937) OX=198628 GN=rpsA PE=... [more]
Q6NDP11.2e-0436.7130S ribosomal protein S1 OS=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA... [more]
P0AG691.5e-0425.1330S ribosomal protein S1 OS=Escherichia coli O157:H7 OX=83334 GN=rpsA PE=3 SV=1[more]
BLAST of MC01g_new0335 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022974554.11.88e-11896.20uncharacterized protein LOC111473236 [Cucurbita maxima][more]
YP_009706796.11.88e-11896.20ribosomal protein S1 [Ilex pubescens] >QEP49792.1 ribosomal protein S1 [Ilex pub... [more]
YP_009913648.15.65e-11796.74ribosomal protein S1 [Luffa acutangula] >QLJ93022.1 ribosomal protein S1 [Luffa ... [more]
QCB20452.11.27e-11695.11ribosomal protein S1 [Actinidia chinensis] >QCD14084.1 ribosomal protein S1 [Act... [more]
YP_003587379.22.47e-11694.57ribosomal protein S1 [Cucurbita pepo] >ACV96689.2 ribosomal protein S1 [Cucurbit... [more]
BLAST of MC01g_new0335 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IHY39.11e-11996.20uncharacterized protein LOC111473236 OS=Cucurbita maxima OX=3661 GN=LOC111473236... [more]
A0A5C2I3869.11e-11996.20Ribosomal protein S1 OS=Ilex pubescens OX=185543 GN=rps1 PE=4 SV=1[more]
A0A7D5Y1322.74e-11796.74Ribosomal protein S1 OS=Luffa acutangula OX=56866 GN=rps1 PE=4 SV=1[more]
A0A4D6FU876.13e-11795.11Ribosomal protein S1 OS=Actinidia chinensis OX=3625 GN=rps1 PE=4 SV=1[more]
A0A4D6J5C96.13e-11795.11Ribosomal protein S1 OS=Actinidia eriantha OX=165200 GN=rps1 PE=4 SV=1[more]
BLAST of MC01g_new0335 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC01g_new0335.1MC01g_new0335.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005840 ribosome