MC01g_new0308 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g_new0308
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Pentatricopeptide repeat-containing protein
Location	MC01: 12677536 .. 12679787 (+)
RNA-Seq Expression	MC01g_new0308
Synteny	MC01g_new0308

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCGTTCTCTCCGCGCCATGGAACACTCGCCTCAGAGAACTAGCAAAACGATGCCAATTCCTTCAAGCTCTGAACCTCTATTTCCAAATGCTTCGCCATGGCGATCGCCCCAATGCCTTCACTTTCCCGTTTGCTCTCAAATCCTGCGCGGCCCTCTCGCTCCCCATACTTGGCGCCCAACTCCATGGCCAAATCGTCAAACTTGGGTGTGAGGCTGAACCTTTTGTGCAAACTGCTTTGATTTCTATGTACTGCAGAGGTTCTCTGGTGGAGGATGCTCGTAAAGTGTTCGATGAGAATTCCCAGTCGAGAAGACTAACTGTTTGCTACAATGCTTTGATTTCCGGCTATGTCTTGAATTCAAAAGGTTCTGATGCGGTTCTATTGTTTCACCAAATGAATGAAGAGGGCGTCCCTGTTAATTCAGTGACATTGTTGGGTTTGATCCCGGTGTGTATATCTCCGATTAACTTGGAGCTTGGATCGTCTCTTCATGGCTCTACATTAAAATATGGATTGGATTCCGATGTCTCTGTTGTTAACTGCTTCATTACTATGTACATGAAATGTGATATGGTGAATCATGCACAGGACCTGTTTGATGAAATGCCTGACAAGGGTTTGATTTCTTGGAACGCTATGATTTCTGGGTACGCCCAAAATGGGCTGGCAACAAATGTTTTGAAGCTATATCATGACATGGAATTGCGTGGGGTTCACCCGGATCCTGTCACTCTTGTGGGAGTTTTATCATCTTGCGCCAACCTTGGGGCTCAGAGTGTTGGCCGTGAGGTAGAATGTAAGATCCAAGCAAGTGGGTTTGGCCGCAATCCGTTTCTGAATAATGCTTTGATCAATATGTACGCAAGGTGTGGCAATTTAGCGAAGGCACAAACATTGTTTGATGAAACGCCTGAGAAAACATTGGTTTCATGGACGGCAATTATAGGTGGGTATGGAATCCATGGACGTGGAGAAATTGCAGTGCAGCTTTTCGAAGAGATGATAGGAAGTGGCATTGTACCTGATGGAACTGCATTTGTGAGTGTCTTGTCTGCCTGTAGCCATGCTGGGCTTACTGATAGAGGCTTGGAATATTTCAAGACGATGGGGAGAAACTATCAATTGGAACCAGGTCCGGAGCATTATTCATGTATGGTGGATCTTCTGGGGCGAGCCGGGCGGCTAAACGAAGCTCAGAATCTCATCGAATCCATGCCAATGGAGCCTGATGGTGCCGTCTGGGGAGCTCTTCTGGGTGCTTGTAAGATCCACCAGAACGTTGAGTTAGCAGAGCTGGCTTTTGAACGTGTGGTTGAGCTAGAACCTGCAAATATAGGATACTATGTTTTGCTATCAAACATTTACTCTGATACCAAGAATTCAAAAGGGGTTTTGAGGATCCGGATTATGATGAAGGAGAGGAGGCTGAAAAAGGATCCTGGATGTAGCTATGTTGAACTGAAGGGCAGAGTTCATCCATTTGTGGCTGGGGATAGAAGCCATCCCCAGGTCGAAGAGATATATAGAGTTTTAGAAGAGTTAGAAACATTGGTGCAGGAATTTGGAGAGCCTAAAAAGGATGATGTTGATGGAGAAGAGAGCAACAAAAAGCTGTTTACTGGAGCTGGAGTTCATAGTGAAAAGTTGGCTGTTGCTTTTGGACTCCTGAATACCACGGCTGGGATGGAAATTGTGGTCATAAAGAACCTGAGGATATGTGAAGATTGTCACTTGTTTTTCAAGCTGGTTAGCAACATCGTCCATCGCCAATTGACCGTAAGAGATGCAACCCGCTTCCACCATTTTCGAAATGGGAGCTGTTCTTGCAATGATTATTGGTAGAATCATGGACTTGTTTGTTATTATTGTTTTGGTTAACTTACAAATTTAGTCTATGGTGTGTGCCTATACCTCTTTAAACTTTACTAAATTTCAATTGCTTCTCTATCCCTGCCAGCTATCAACACCATCCAGCAAAAATTGGTTGAAACGAGACGAGAATCTAAGATGGTTTCACAAATGGGTTATTAAACAATACACATGGTAATAGGAATATGCTGGATTACACCCAAATTCTCTTTTCATCTGCTGGAATGGATGAAGATGTTGATAGGTTGAGATCAGTTTTGGACGGTATTATTTCCCTATTCCAAAGTGCTTTCTTTTATCATAAAATCATTCATACAAGCAATAATAGGAGGCAAGATAAGGAAACATTTGCAACTTCAAAGCTCGTGACAGAGTAG

mRNA sequence

ATGACCGTTCTCTCCGCGCCATGGAACACTCGCCTCAGAGAACTAGCAAAACGATGCCAATTCCTTCAAGCTCTGAACCTCTATTTCCAAATGCTTCGCCATGGCGATCGCCCCAATGCCTTCACTTTCCCGTTTGCTCTCAAATCCTGCGCGGCCCTCTCGCTCCCCATACTTGGCGCCCAACTCCATGGCCAAATCGTCAAACTTGGGTGTGAGGCTGAACCTTTTGTGCAAACTGCTTTGATTTCTATGTACTGCAGAGGTTCTCTGGTGGAGGATGCTCGTAAAGTGTTCGATGAGAATTCCCAGTCGAGAAGACTAACTGTTTGCTACAATGCTTTGATTTCCGGCTATGTCTTGAATTCAAAAGGTTCTGATGCGGTTCTATTGTTTCACCAAATGAATGAAGAGGGCGTCCCTGTTAATTCAGTGACATTGTTGGGTTTGATCCCGGTGTGTATATCTCCGATTAACTTGGAGCTTGGATCGTCTCTTCATGGCTCTACATTAAAATATGGATTGGATTCCGATGTCTCTGTTGTTAACTGCTTCATTACTATGTACATGAAATGTGATATGGTGAATCATGCACAGGACCTGTTTGATGAAATGCCTGACAAGGGTTTGATTTCTTGGAACGCTATGATTTCTGGGTACGCCCAAAATGGGCTGGCAACAAATGTTTTGAAGCTATATCATGACATGGAATTGCGTGGGGTTCACCCGGATCCTGTCACTCTTGTGGGAGTTTTATCATCTTGCGCCAACCTTGGGGCTCAGAGTGTTGGCCGTGAGGTAGAATGTAAGATCCAAGCAAGTGGGTTTGGCCGCAATCCGTTTCTGAATAATGCTTTGATCAATATGTACGCAAGGTGTGGCAATTTAGCGAAGGCACAAACATTGTTTGATGAAACGCCTGAGAAAACATTGGTTTCATGGACGGCAATTATAGGTGGGAATATGCTGGATTACACCCAAATTCTCTTTTCATCTGCTGGAATGGATGAAGATGTTGATAGGTTGAGATCAGTTTTGGACGGTATTATTTCCCTATTCCAAAGTGCTTTCTTTTATCATAAAATCATTCATACAAGCAATAATAGGAGGCAAGATAAGGAAACATTTGCAACTTCAAAGCTCGTGACAGAGTAG

Coding sequence (CDS)

ATGACCGTTCTCTCCGCGCCATGGAACACTCGCCTCAGAGAACTAGCAAAACGATGCCAATTCCTTCAAGCTCTGAACCTCTATTTCCAAATGCTTCGCCATGGCGATCGCCCCAATGCCTTCACTTTCCCGTTTGCTCTCAAATCCTGCGCGGCCCTCTCGCTCCCCATACTTGGCGCCCAACTCCATGGCCAAATCGTCAAACTTGGGTGTGAGGCTGAACCTTTTGTGCAAACTGCTTTGATTTCTATGTACTGCAGAGGTTCTCTGGTGGAGGATGCTCGTAAAGTGTTCGATGAGAATTCCCAGTCGAGAAGACTAACTGTTTGCTACAATGCTTTGATTTCCGGCTATGTCTTGAATTCAAAAGGTTCTGATGCGGTTCTATTGTTTCACCAAATGAATGAAGAGGGCGTCCCTGTTAATTCAGTGACATTGTTGGGTTTGATCCCGGTGTGTATATCTCCGATTAACTTGGAGCTTGGATCGTCTCTTCATGGCTCTACATTAAAATATGGATTGGATTCCGATGTCTCTGTTGTTAACTGCTTCATTACTATGTACATGAAATGTGATATGGTGAATCATGCACAGGACCTGTTTGATGAAATGCCTGACAAGGGTTTGATTTCTTGGAACGCTATGATTTCTGGGTACGCCCAAAATGGGCTGGCAACAAATGTTTTGAAGCTATATCATGACATGGAATTGCGTGGGGTTCACCCGGATCCTGTCACTCTTGTGGGAGTTTTATCATCTTGCGCCAACCTTGGGGCTCAGAGTGTTGGCCGTGAGGTAGAATGTAAGATCCAAGCAAGTGGGTTTGGCCGCAATCCGTTTCTGAATAATGCTTTGATCAATATGTACGCAAGGTGTGGCAATTTAGCGAAGGCACAAACATTGTTTGATGAAACGCCTGAGAAAACATTGGTTTCATGGACGGCAATTATAGGTGGGAATATGCTGGATTACACCCAAATTCTCTTTTCATCTGCTGGAATGGATGAAGATGTTGATAGGTTGAGATCAGTTTTGGACGGTATTATTTCCCTATTCCAAAGTGCTTTCTTTTATCATAAAATCATTCATACAAGCAATAATAGGAGGCAAGATAAGGAAACATTTGCAACTTCAAAGCTCGTGACAGAGTAG

Protein sequence

MTVLSAPWNTRLRELAKRCQFLQALNLYFQMLRHGDRPNAFTFPFALKSCAALSLPILGAQLHGQIVKLGCEAEPFVQTALISMYCRGSLVEDARKVFDENSQSRRLTVCYNALISGYVLNSKGSDAVLLFHQMNEEGVPVNSVTLLGLIPVCISPINLELGSSLHGSTLKYGLDSDVSVVNCFITMYMKCDMVNHAQDLFDEMPDKGLISWNAMISGYAQNGLATNVLKLYHDMELRGVHPDPVTLVGVLSSCANLGAQSVGREVECKIQASGFGRNPFLNNALINMYARCGNLAKAQTLFDETPEKTLVSWTAIIGGNMLDYTQILFSSAGMDEDVDRLRSVLDGIISLFQSAFFYHKIIHTSNNRRQDKETFATSKLVTE

Homology

[Close]

BLAST of MC01g_new0308 vs. ExPASy Swiss-Prot
Match: Q9CAY1 (Putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H52 PE=1 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 1.5e-110
Identity = 197/316 (62.34%), Postives = 243/316 (76.90%), Query Frame = 0


Query: 3   VLSAPWNTRLRELAKRCQFLQALNLYFQMLRHGDRPNAFTFPFALKSCAALSLPILGAQL 62
           V S PWN RLRELA +  F ++++LY  MLR G  P+AF+FPF LKSCA+LSLP+ G QL
Sbjct: 16  VASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQL 75

Query: 63  HGQIVKLGCEAEPFVQTALISMYCRGSLVEDARKVFDENSQSRRLTVCYNALISGYVLNS 122
           H  + K GCE EPFV TALISMYC+  LV DARKVF+EN QS +L+VCYNALISGY  NS
Sbjct: 76  HCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANS 135

Query: 123 KGSDAVLLFHQMNEEGVPVNSVTLLGLIPVCISPINLELGSSLHGSTLKYGLDSDVSVVN 182
           K +DA  +F +M E GV V+SVT+LGL+P+C  P  L LG SLHG  +K GLDS+V+V+N
Sbjct: 136 KVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLN 195

Query: 183 CFITMYMKCDMVNHAQDLFDEMPDKGLISWNAMISGYAQNGLATNVLKLYHDMELRGVHP 242
            FITMYMKC  V   + LFDEMP KGLI+WNA+ISGY+QNGLA +VL+LY  M+  GV P
Sbjct: 196 SFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCP 255

Query: 243 DPVTLVGVLSSCANLGAQSVGREVECKIQASGFGRNPFLNNALINMYARCGNLAKAQTLF 302
           DP TLV VLSSCA+LGA+ +G EV   ++++GF  N F++NA I+MYARCGNLAKA+ +F
Sbjct: 256 DPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVF 315

Query: 303 DETPEKTLVSWTAIIG 319
           D  P K+LVSWTA+IG
Sbjct: 316 DIMPVKSLVSWTAMIG 331

[Close]

BLAST of MC01g_new0308 vs. ExPASy Swiss-Prot
Match: Q9LTV8 (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.6e-54
Identity = 109/313 (34.82%), Postives = 182/313 (58.15%), Query Frame = 0


Query: 7   PWNTRLRELAKRCQFLQALNLYFQMLRHGDRPNAFTFPFALKSCAALSLPILGAQLHGQI 66
           PWN  +R  ++   F  AL +Y  M      P++FTFP  LK+C+ LS   +G  +H Q+
Sbjct: 86  PWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQV 145

Query: 67  VKLGCEAEPFVQTALISMYCRGSLVEDARKVFDENSQSRRLTVCYNALISGYVLNSKGSD 126
            +LG +A+ FVQ  LI++Y +   +  AR VF+      R  V + A++S Y  N +  +
Sbjct: 146 FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPME 205

Query: 127 AVLLFHQMNEEGVPVNSVTLLGLIPVCISPINLELGSSLHGSTLKYGLDSDVSVVNCFIT 186
           A+ +F QM +  V  + V L+ ++       +L+ G S+H S +K GL+ +  ++    T
Sbjct: 206 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT 265

Query: 187 MYMKCDMVNHAQDLFDEMPDKGLISWNAMISGYAQNGLATNVLKLYHDMELRGVHPDPVT 246
           MY KC  V  A+ LFD+M    LI WNAMISGYA+NG A   + ++H+M  + V PD ++
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325

Query: 247 LVGVLSSCANLGAQSVGREVECKIQASGFGRNPFLNNALINMYARCGNLAKAQTLFDETP 306
           +   +S+CA +G+    R +   +  S +  + F+++ALI+M+A+CG++  A+ +FD T 
Sbjct: 326 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385

Query: 307 EKTLVSWTAIIGG 320
           ++ +V W+A+I G
Sbjct: 386 DRDVVVWSAMIVG 398

[Close]

BLAST of MC01g_new0308 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 6.6e-53
Identity = 120/343 (34.99%), Postives = 178/343 (51.90%), Query Frame = 0


Query: 8   WNTRLRELAKRCQFLQALNLYFQMLRHGDRPNAFTFPFALKSCAALSLPILGAQLHGQIV 67
           WNT  R  A     + AL LY  M+  G  PN++TFPF LKSCA       G Q+HG ++
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161

Query: 68  KLGCEAEPFVQTALISMYCRGSLVEDARKVFD-----------------------ENSQS 127
           KLGC+ + +V T+LISMY +   +EDA KVFD                       EN+Q 
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221

Query: 128 R------RLTVCYNALISGYVLNSKGSDAVLLFHQMNEEGVPVNSVTLLGLIPVCISPIN 187
                  +  V +NA+ISGY       +A+ LF  M +  V  +  T++ ++  C    +
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281

Query: 188 LELGSSLHGSTLKYGLDSDVSVVNCFITMYMKCDMVNHAQDLFDEMPDKGLISWNAMISG 247
           +ELG  +H     +G  S++ +VN  I +Y KC  +  A  LF+ +P K +ISWN +I G
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGG 341

Query: 248 YAQNGLATNVLKLYHDMELRGVHPDPVTLVGVLSSCANLGAQSVGREVECKI--QASGFG 307
           Y    L    L L+ +M   G  P+ VT++ +L +CA+LGA  +GR +   I  +  G  
Sbjct: 342 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVT 401

Query: 308 RNPFLNNALINMYARCGNLAKAQTLFDETPEKTLVSWTAIIGG 320
               L  +LI+MYA+CG++  A  +F+    K+L SW A+I G
Sbjct: 402 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFG 444

[Close]

BLAST of MC01g_new0308 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 4.7e-51
Identity = 117/364 (32.14%), Postives = 190/364 (52.20%), Query Frame = 0


Query: 8   WNTRLRELAKRCQFLQALNLYFQMLRHGDRPNAFTFPFALKSCAALSLPILGAQLHGQIV 67
           WN  + ELAK   F  ++ L+ +M+  G   +++TF    KS ++L     G QLHG I+
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222

Query: 68  KLGCEAEPFVQTALISMYCRGSLVEDARKVFDENSQSRRLTVCYNALISGYVLNSKGSDA 127
           K G      V  +L++ Y +   V+ ARKVFDE   + R  + +N++I+GYV N      
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDE--MTERDVISWNSIINGYVSNGLAEKG 282

Query: 128 VLLFHQMNEEGVPVNSVTLLGLIPVCISPINLELGSSLHGSTLKYGLDSDVSVVNCFITM 187
           + +F QM   G+ ++  T++ +   C     + LG ++H   +K     +    N  + M
Sbjct: 283 LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDM 342

Query: 188 YMKCDMVNHAQDLFDEMPDKGLISWNAMISGYAQNGLATNVLKLYHDMELRGVHPDPVTL 247
           Y KC  ++ A+ +F EM D+ ++S+ +MI+GYA+ GLA   +KL+ +ME  G+ PD  T+
Sbjct: 343 YSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 402

Query: 248 VGVLSSCANLGAQSVGREVECKIQASGFGRNPFLNNALINMYARCGNLAKAQTLFDETPE 307
             VL+ CA       G+ V   I+ +  G + F++NAL++MYA+CG++ +A+ +F E   
Sbjct: 403 TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 462

Query: 308 KTLVSWTAIIGG--------NMLDYTQILFSSAGMDEDVDRLRSVLDGIISLFQSAFFYH 364
           K ++SW  IIGG          L    +L        D   +  VL    SL  SAF   
Sbjct: 463 KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL--SAFDKG 522

[Close]

BLAST of MC01g_new0308 vs. ExPASy Swiss-Prot
Match: Q0WSH6 (Pentatricopeptide repeat-containing protein At4g14850 OS=Arabidopsis thaliana OX=3702 GN=LOI1 PE=1 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 5.2e-50
Identity = 109/312 (34.94%), Postives = 162/312 (51.92%), Query Frame = 0


Query: 8   WNTRLRELAKRCQFLQALNLYFQMLRHGDRPNAFTFPFALKSCAALSLPILGAQLHGQIV 67
           W + +  LA+   F  AL  +F+M R G  PN FTFP A K+ A+L LP+ G Q+H   V
Sbjct: 76  WTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAV 135

Query: 68  KLGCEAEPFVQTALISMYCRGSLVEDARKVFDENSQSRRLTVCYNALISGYVLNSKGSDA 127
           K G   + FV  +   MYC+  L +DARK+FDE  +    T  +NA IS  V + +  +A
Sbjct: 136 KCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLET--WNAFISNSVTDGRPREA 195

Query: 128 VLLFHQMNEEGVPVNSVTLLGLIPVCISPINLELGSSLHGSTLKYGLDSDVSVVNCFITM 187
           +  F +        NS+T    +  C   ++L LG  LHG  L+ G D+DVSV N  I  
Sbjct: 196 IEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDF 255

Query: 188 YMKCDMVNHAQDLFDEMPDKGLISWNAMISGYAQNGLATNVLKLYHDMELRGVHPDPVTL 247
           Y KC  +  ++ +F EM  K  +SW ++++ Y QN        LY       V      +
Sbjct: 256 YGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMI 315

Query: 248 VGVLSSCANLGAQSVGREVECKIQASGFGRNPFLNNALINMYARCGNLAKAQTLFDETPE 307
             VLS+CA +    +GR +      +   R  F+ +AL++MY +CG +  ++  FDE PE
Sbjct: 316 SSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPE 375

Query: 308 KTLVSWTAIIGG 320
           K LV+  ++IGG
Sbjct: 376 KNLVTRNSLIGG 385

[Close]

BLAST of MC01g_new0308 vs. NCBI nr
Match: XP_022132717.1 (putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial [Momordica charantia])

HSP 1 Score: 650 bits (1677), Expect = 8.80e-230
Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 0


Query: 1   MTVLSAPWNTRLRELAKRCQFLQALNLYFQMLRHGDRPNAFTFPFALKSCAALSLPILGA 60
           MTVLSAPWNTRLRELAKRCQFLQALNLYFQMLRHGDRPNAFTFPFALKSCAALSLPILGA
Sbjct: 1   MTVLSAPWNTRLRELAKRCQFLQALNLYFQMLRHGDRPNAFTFPFALKSCAALSLPILGA 60

Query: 61  QLHGQIVKLGCEAEPFVQTALISMYCRGSLVEDARKVFDENSQSRRLTVCYNALISGYVL 120
           QLHGQIVKLGCEAEPFVQTALISMYCRGSLVEDARKVFDENSQSRRLTVCYNALISGYVL
Sbjct: 61  QLHGQIVKLGCEAEPFVQTALISMYCRGSLVEDARKVFDENSQSRRLTVCYNALISGYVL 120

Query: 121 NSKGSDAVLLFHQMNEEGVPVNSVTLLGLIPVCISPINLELGSSLHGSTLKYGLDSDVSV 180
           NSKGSDAVLLFHQMNEEGVPVNSVTLLGLIPVCISPINLELGSSLHGSTLKYGLDSDVSV
Sbjct: 121 NSKGSDAVLLFHQMNEEGVPVNSVTLLGLIPVCISPINLELGSSLHGSTLKYGLDSDVSV 180

Query: 181 VNCFITMYMKCDMVNHAQDLFDEMPDKGLISWNAMISGYAQNGLATNVLKLYHDMELRGV 240
           VNCFITMYMKCDMVNHAQDLFDEMPDKGLISWNAMISGYAQNGLATNVLKLYHDMELRGV
Sbjct: 181 VNCFITMYMKCDMVNHAQDLFDEMPDKGLISWNAMISGYAQNGLATNVLKLYHDMELRGV 240

Query: 241 HPDPVTLVGVLSSCANLGAQSVGREVECKIQASGFGRNPFLNNALINMYARCGNLAKAQT 300
           HPDPVTLVGVLSSCANLGAQSVGREVECKIQASGFGRNPFLNNALINMYARCGNLAKAQT
Sbjct: 241 HPDPVTLVGVLSSCANLGAQSVGREVECKIQASGFGRNPFLNNALINMYARCGNLAKAQT 300

Query: 301 LFDETPEKTLVSWTAIIGG 319
           LFDETPEKTLVSWTAIIGG
Sbjct: 301 LFDETPEKTLVSWTAIIGG 319

[Close]

BLAST of MC01g_new0308 vs. NCBI nr
Match: KAG7034495.1 (putative pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 571 bits (1471), Expect = 2.06e-199
Identity = 285/348 (81.90%), Postives = 306/348 (87.93%), Query Frame = 0


Query: 1   MTVLSAPWNTRLRELAKRCQFLQALNLYFQMLRHGDRPNAFTFPFALKSCAALSLPILGA 60
           MT LS PWNT+LRELAKRCQFLQAL+LY QMLRHGD PNAFTFPFALKSCAALSLPILG 
Sbjct: 1   MTALSTPWNTQLRELAKRCQFLQALSLYTQMLRHGDHPNAFTFPFALKSCAALSLPILGG 60

Query: 61  QLHGQIVKLGCEAEPFVQTALISMYCRGSLVEDARKVFDENSQSRRLTVCYNALISGYVL 120
           Q HGQI+K+GCE+EPFVQT LISMYCRGSL+ +ARKVFDE SQSR+LTVCYNALISGYV 
Sbjct: 61  QFHGQIIKVGCESEPFVQTGLISMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVS 120

Query: 121 NSKGSDAVLLFHQMNEEGVPVNSVTLLGLIPVCISPINLELGSSLHGSTLKYGLDSDVSV 180
           NSK SDAVLLF QMNEEGVPVNSVTLLGLIPVC+SPINLELG SLH STLKYGLDSDVSV
Sbjct: 121 NSKSSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGLSLHCSTLKYGLDSDVSV 180

Query: 181 VNCFITMYMKCDMVNHAQDLFDEMPDKGLISWNAMISGYAQNGLATNVLKLYHDMELRGV 240
           VNCFITMYMKC  VNHAQ+LFDEMP+KGLISWNAM+SGYAQNGLA NVL+LYH+MEL G+
Sbjct: 181 VNCFITMYMKCGSVNHAQNLFDEMPEKGLISWNAMVSGYAQNGLAPNVLELYHNMELHGI 240

Query: 241 HPDPVTLVGVLSSCANLGAQSVGREVECKIQASGFGRNPFLNNALINMYARCGNLAKAQT 300
           HPDP TLVGVLSSCANLGAQSVGREVE KIQASGF  N FLNNALINMYARCGNL KAQ 
Sbjct: 241 HPDPFTLVGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQA 300

Query: 301 LFDETPEKTLVSWTAIIGG-NMLDYTQILFSSAGMDEDVDRLRSVLDG 347
           LFDE PE+TLVSWTAIIGG  M  + +I   +  + ED+ R   V DG
Sbjct: 301 LFDEMPERTLVSWTAIIGGYGMHGHGEI---AVQLFEDMIRSGIVPDG 345

[Close]

BLAST of MC01g_new0308 vs. NCBI nr
Match: XP_023544808.1 (putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 572 bits (1473), Expect = 7.66e-199
Identity = 285/348 (81.90%), Postives = 307/348 (88.22%), Query Frame = 0


Query: 1   MTVLSAPWNTRLRELAKRCQFLQALNLYFQMLRHGDRPNAFTFPFALKSCAALSLPILGA 60
           MT LS PWNT+LRELAKRCQFLQAL+LY QMLRHGD PNAFTFPFALKSCAALSLPILG 
Sbjct: 1   MTALSTPWNTQLRELAKRCQFLQALSLYAQMLRHGDHPNAFTFPFALKSCAALSLPILGG 60

Query: 61  QLHGQIVKLGCEAEPFVQTALISMYCRGSLVEDARKVFDENSQSRRLTVCYNALISGYVL 120
           Q HGQI+K+GCE+EPFVQT LISMYCRGSL+ +ARKVFDE SQSR+LTVCYNALISGYV 
Sbjct: 61  QFHGQIIKVGCESEPFVQTGLISMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVS 120

Query: 121 NSKGSDAVLLFHQMNEEGVPVNSVTLLGLIPVCISPINLELGSSLHGSTLKYGLDSDVSV 180
           NSK SDAVLLF QMNEEGVPVNSVTLLGLIPVC+SPINLELG SLH STLKYGLDSDVSV
Sbjct: 121 NSKSSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGLSLHCSTLKYGLDSDVSV 180

Query: 181 VNCFITMYMKCDMVNHAQDLFDEMPDKGLISWNAMISGYAQNGLATNVLKLYHDMELRGV 240
           VNCFITMYMKC  VNHAQ+LFD+MP+KGLISWNAM+SGYAQNGLATNVL+LYH+MEL G+
Sbjct: 181 VNCFITMYMKCGSVNHAQNLFDKMPEKGLISWNAMVSGYAQNGLATNVLELYHNMELHGI 240

Query: 241 HPDPVTLVGVLSSCANLGAQSVGREVECKIQASGFGRNPFLNNALINMYARCGNLAKAQT 300
           HPDP TLVGVLSSCANLGAQSVGREVE KIQASGF  N FLNNALINMYARCGNL KAQ 
Sbjct: 241 HPDPFTLVGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQA 300

Query: 301 LFDETPEKTLVSWTAIIGG-NMLDYTQILFSSAGMDEDVDRLRSVLDG 347
           LFDE PE+TLVSWTAIIGG  M  + +I   +  + ED+ R   V DG
Sbjct: 301 LFDEMPERTLVSWTAIIGGYGMHGHGEI---AVQLFEDMIRSGIVPDG 345

[Close]

BLAST of MC01g_new0308 vs. NCBI nr
Match: XP_022925954.1 (putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial [Cucurbita moschata])

HSP 1 Score: 571 bits (1472), Expect = 1.09e-198
Identity = 285/348 (81.90%), Postives = 306/348 (87.93%), Query Frame = 0


Query: 1   MTVLSAPWNTRLRELAKRCQFLQALNLYFQMLRHGDRPNAFTFPFALKSCAALSLPILGA 60
           MT LS PWNT+LRELAKRCQFLQAL+LY QMLRHGD PNAFTFPFALKSCAALSLPILG 
Sbjct: 1   MTALSTPWNTQLRELAKRCQFLQALSLYTQMLRHGDHPNAFTFPFALKSCAALSLPILGG 60

Query: 61  QLHGQIVKLGCEAEPFVQTALISMYCRGSLVEDARKVFDENSQSRRLTVCYNALISGYVL 120
           Q HGQI+K+GCE+EPFVQT LISMYCRGSL+ +ARKVFDE SQSR+LTVCYNALISGYV 
Sbjct: 61  QFHGQIIKVGCESEPFVQTGLISMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVS 120

Query: 121 NSKGSDAVLLFHQMNEEGVPVNSVTLLGLIPVCISPINLELGSSLHGSTLKYGLDSDVSV 180
           NSK SDAVLLF QMNEEGVPVNSVTLLGLIPVC+SPINLELG SLH STLKYGLDSDVSV
Sbjct: 121 NSKSSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGLSLHCSTLKYGLDSDVSV 180

Query: 181 VNCFITMYMKCDMVNHAQDLFDEMPDKGLISWNAMISGYAQNGLATNVLKLYHDMELRGV 240
           VNCFITMYMKC  VNHAQ+LFDEMP+KGLISWNAM+SGYAQNGLA NVL+LYH+MEL G+
Sbjct: 181 VNCFITMYMKCGSVNHAQNLFDEMPEKGLISWNAMVSGYAQNGLAANVLELYHNMELHGI 240

Query: 241 HPDPVTLVGVLSSCANLGAQSVGREVECKIQASGFGRNPFLNNALINMYARCGNLAKAQT 300
           HPDP TLVGVLSSCANLGAQSVGREVE KIQASGF  N FLNNALINMYARCGNL KAQ 
Sbjct: 241 HPDPFTLVGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQA 300

Query: 301 LFDETPEKTLVSWTAIIGG-NMLDYTQILFSSAGMDEDVDRLRSVLDG 347
           LFDE PE+TLVSWTAIIGG  M  + +I   +  + ED+ R   V DG
Sbjct: 301 LFDEMPERTLVSWTAIIGGYGMHGHGEI---AVQLFEDMIRSGIVPDG 345

[Close]

BLAST of MC01g_new0308 vs. NCBI nr
Match: XP_022977443.1 (putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial [Cucurbita maxima])

HSP 1 Score: 571 bits (1472), Expect = 1.12e-198
Identity = 285/348 (81.90%), Postives = 306/348 (87.93%), Query Frame = 0


Query: 1   MTVLSAPWNTRLRELAKRCQFLQALNLYFQMLRHGDRPNAFTFPFALKSCAALSLPILGA 60
           MT LS PWNTRLRELAKRCQFLQAL+LY QMLRHGD PNAFTFPFALKSCAALSLPILG 
Sbjct: 1   MTALSMPWNTRLRELAKRCQFLQALSLYAQMLRHGDHPNAFTFPFALKSCAALSLPILGG 60

Query: 61  QLHGQIVKLGCEAEPFVQTALISMYCRGSLVEDARKVFDENSQSRRLTVCYNALISGYVL 120
           Q HGQI+K+GCE+EPFVQT L+SMYCRGSL+ +ARKVFDE SQSR+LTVCYNALISGYV 
Sbjct: 61  QFHGQIIKVGCESEPFVQTGLLSMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVS 120

Query: 121 NSKGSDAVLLFHQMNEEGVPVNSVTLLGLIPVCISPINLELGSSLHGSTLKYGLDSDVSV 180
           NSK SDAVLLF QMNEEGVPVNSVTLL LIPVC+SPINLELG SLH STLKYGLDSDVSV
Sbjct: 121 NSKSSDAVLLFRQMNEEGVPVNSVTLLSLIPVCVSPINLELGLSLHCSTLKYGLDSDVSV 180

Query: 181 VNCFITMYMKCDMVNHAQDLFDEMPDKGLISWNAMISGYAQNGLATNVLKLYHDMELRGV 240
           VNCFITMYMKC  VNHAQ+LFDEMP+KGLISWNAM+SGYAQNGLATNVL+LYH+MEL G+
Sbjct: 181 VNCFITMYMKCGSVNHAQNLFDEMPEKGLISWNAMVSGYAQNGLATNVLELYHNMELHGI 240

Query: 241 HPDPVTLVGVLSSCANLGAQSVGREVECKIQASGFGRNPFLNNALINMYARCGNLAKAQT 300
           HPDP TLVGVLSSCANLGAQSVGREVE KIQASGF  N FLNNALINMYARCGNL KAQ 
Sbjct: 241 HPDPFTLVGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQA 300

Query: 301 LFDETPEKTLVSWTAIIGG-NMLDYTQILFSSAGMDEDVDRLRSVLDG 347
           LFDE PE+TLVSWTAIIGG  M  + +I   +  + ED+ R   V DG
Sbjct: 301 LFDEMPERTLVSWTAIIGGYGMHGHGEI---AVQLFEDMIRSGIVPDG 345

[Close]

BLAST of MC01g_new0308 vs. ExPASy TrEMBL
Match: A0A6J1BUL8 (putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111005513 PE=3 SV=1)

HSP 1 Score: 650 bits (1677), Expect = 4.26e-230
Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 0


Query: 1   MTVLSAPWNTRLRELAKRCQFLQALNLYFQMLRHGDRPNAFTFPFALKSCAALSLPILGA 60
           MTVLSAPWNTRLRELAKRCQFLQALNLYFQMLRHGDRPNAFTFPFALKSCAALSLPILGA
Sbjct: 1   MTVLSAPWNTRLRELAKRCQFLQALNLYFQMLRHGDRPNAFTFPFALKSCAALSLPILGA 60

Query: 61  QLHGQIVKLGCEAEPFVQTALISMYCRGSLVEDARKVFDENSQSRRLTVCYNALISGYVL 120
           QLHGQIVKLGCEAEPFVQTALISMYCRGSLVEDARKVFDENSQSRRLTVCYNALISGYVL
Sbjct: 61  QLHGQIVKLGCEAEPFVQTALISMYCRGSLVEDARKVFDENSQSRRLTVCYNALISGYVL 120

Query: 121 NSKGSDAVLLFHQMNEEGVPVNSVTLLGLIPVCISPINLELGSSLHGSTLKYGLDSDVSV 180
           NSKGSDAVLLFHQMNEEGVPVNSVTLLGLIPVCISPINLELGSSLHGSTLKYGLDSDVSV
Sbjct: 121 NSKGSDAVLLFHQMNEEGVPVNSVTLLGLIPVCISPINLELGSSLHGSTLKYGLDSDVSV 180

Query: 181 VNCFITMYMKCDMVNHAQDLFDEMPDKGLISWNAMISGYAQNGLATNVLKLYHDMELRGV 240
           VNCFITMYMKCDMVNHAQDLFDEMPDKGLISWNAMISGYAQNGLATNVLKLYHDMELRGV
Sbjct: 181 VNCFITMYMKCDMVNHAQDLFDEMPDKGLISWNAMISGYAQNGLATNVLKLYHDMELRGV 240

Query: 241 HPDPVTLVGVLSSCANLGAQSVGREVECKIQASGFGRNPFLNNALINMYARCGNLAKAQT 300
           HPDPVTLVGVLSSCANLGAQSVGREVECKIQASGFGRNPFLNNALINMYARCGNLAKAQT
Sbjct: 241 HPDPVTLVGVLSSCANLGAQSVGREVECKIQASGFGRNPFLNNALINMYARCGNLAKAQT 300

Query: 301 LFDETPEKTLVSWTAIIGG 319
           LFDETPEKTLVSWTAIIGG
Sbjct: 301 LFDETPEKTLVSWTAIIGG 319

[Close]

BLAST of MC01g_new0308 vs. ExPASy TrEMBL
Match: A0A6J1EDM7 (putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111433216 PE=3 SV=1)

HSP 1 Score: 571 bits (1472), Expect = 5.26e-199
Identity = 285/348 (81.90%), Postives = 306/348 (87.93%), Query Frame = 0


Query: 1   MTVLSAPWNTRLRELAKRCQFLQALNLYFQMLRHGDRPNAFTFPFALKSCAALSLPILGA 60
           MT LS PWNT+LRELAKRCQFLQAL+LY QMLRHGD PNAFTFPFALKSCAALSLPILG 
Sbjct: 1   MTALSTPWNTQLRELAKRCQFLQALSLYTQMLRHGDHPNAFTFPFALKSCAALSLPILGG 60

Query: 61  QLHGQIVKLGCEAEPFVQTALISMYCRGSLVEDARKVFDENSQSRRLTVCYNALISGYVL 120
           Q HGQI+K+GCE+EPFVQT LISMYCRGSL+ +ARKVFDE SQSR+LTVCYNALISGYV 
Sbjct: 61  QFHGQIIKVGCESEPFVQTGLISMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVS 120

Query: 121 NSKGSDAVLLFHQMNEEGVPVNSVTLLGLIPVCISPINLELGSSLHGSTLKYGLDSDVSV 180
           NSK SDAVLLF QMNEEGVPVNSVTLLGLIPVC+SPINLELG SLH STLKYGLDSDVSV
Sbjct: 121 NSKSSDAVLLFRQMNEEGVPVNSVTLLGLIPVCVSPINLELGLSLHCSTLKYGLDSDVSV 180

Query: 181 VNCFITMYMKCDMVNHAQDLFDEMPDKGLISWNAMISGYAQNGLATNVLKLYHDMELRGV 240
           VNCFITMYMKC  VNHAQ+LFDEMP+KGLISWNAM+SGYAQNGLA NVL+LYH+MEL G+
Sbjct: 181 VNCFITMYMKCGSVNHAQNLFDEMPEKGLISWNAMVSGYAQNGLAANVLELYHNMELHGI 240

Query: 241 HPDPVTLVGVLSSCANLGAQSVGREVECKIQASGFGRNPFLNNALINMYARCGNLAKAQT 300
           HPDP TLVGVLSSCANLGAQSVGREVE KIQASGF  N FLNNALINMYARCGNL KAQ 
Sbjct: 241 HPDPFTLVGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQA 300

Query: 301 LFDETPEKTLVSWTAIIGG-NMLDYTQILFSSAGMDEDVDRLRSVLDG 347
           LFDE PE+TLVSWTAIIGG  M  + +I   +  + ED+ R   V DG
Sbjct: 301 LFDEMPERTLVSWTAIIGGYGMHGHGEI---AVQLFEDMIRSGIVPDG 345

[Close]

BLAST of MC01g_new0308 vs. ExPASy TrEMBL
Match: A0A6J1IQ02 (putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111477787 PE=3 SV=1)

HSP 1 Score: 571 bits (1472), Expect = 5.44e-199
Identity = 285/348 (81.90%), Postives = 306/348 (87.93%), Query Frame = 0


Query: 1   MTVLSAPWNTRLRELAKRCQFLQALNLYFQMLRHGDRPNAFTFPFALKSCAALSLPILGA 60
           MT LS PWNTRLRELAKRCQFLQAL+LY QMLRHGD PNAFTFPFALKSCAALSLPILG 
Sbjct: 1   MTALSMPWNTRLRELAKRCQFLQALSLYAQMLRHGDHPNAFTFPFALKSCAALSLPILGG 60

Query: 61  QLHGQIVKLGCEAEPFVQTALISMYCRGSLVEDARKVFDENSQSRRLTVCYNALISGYVL 120
           Q HGQI+K+GCE+EPFVQT L+SMYCRGSL+ +ARKVFDE SQSR+LTVCYNALISGYV 
Sbjct: 61  QFHGQIIKVGCESEPFVQTGLLSMYCRGSLLGNARKVFDEKSQSRKLTVCYNALISGYVS 120

Query: 121 NSKGSDAVLLFHQMNEEGVPVNSVTLLGLIPVCISPINLELGSSLHGSTLKYGLDSDVSV 180
           NSK SDAVLLF QMNEEGVPVNSVTLL LIPVC+SPINLELG SLH STLKYGLDSDVSV
Sbjct: 121 NSKSSDAVLLFRQMNEEGVPVNSVTLLSLIPVCVSPINLELGLSLHCSTLKYGLDSDVSV 180

Query: 181 VNCFITMYMKCDMVNHAQDLFDEMPDKGLISWNAMISGYAQNGLATNVLKLYHDMELRGV 240
           VNCFITMYMKC  VNHAQ+LFDEMP+KGLISWNAM+SGYAQNGLATNVL+LYH+MEL G+
Sbjct: 181 VNCFITMYMKCGSVNHAQNLFDEMPEKGLISWNAMVSGYAQNGLATNVLELYHNMELHGI 240

Query: 241 HPDPVTLVGVLSSCANLGAQSVGREVECKIQASGFGRNPFLNNALINMYARCGNLAKAQT 300
           HPDP TLVGVLSSCANLGAQSVGREVE KIQASGF  N FLNNALINMYARCGNL KAQ 
Sbjct: 241 HPDPFTLVGVLSSCANLGAQSVGREVELKIQASGFTNNQFLNNALINMYARCGNLTKAQA 300

Query: 301 LFDETPEKTLVSWTAIIGG-NMLDYTQILFSSAGMDEDVDRLRSVLDG 347
           LFDE PE+TLVSWTAIIGG  M  + +I   +  + ED+ R   V DG
Sbjct: 301 LFDEMPERTLVSWTAIIGGYGMHGHGEI---AVQLFEDMIRSGIVPDG 345

[Close]

BLAST of MC01g_new0308 vs. ExPASy TrEMBL
Match: A0A0A0KFC9 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G452690 PE=3 SV=1)

HSP 1 Score: 550 bits (1418), Expect = 1.13e-190
Identity = 268/319 (84.01%), Postives = 288/319 (90.28%), Query Frame = 0


Query: 1   MTVLSAPWNTRLRELAKRCQFLQALNLYFQMLRHGDRPNAFTFPFALKSCAALSLPILGA 60
           M  LS PWNT+LRELAKRCQFLQAL+LY QMLRHGDRPNAFTFPFALKSCAALSLPILG+
Sbjct: 10  MNALSTPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSLPILGS 69

Query: 61  QLHGQIVKLGCEAEPFVQTALISMYCRGSLVEDARKVFDENSQSRRLTVCYNALISGYVL 120
           Q HGQI K+GC  EPFVQT LISMYC+GSLV++ARKVF+EN  SR+LTVCYNAL+SGYV 
Sbjct: 70  QFHGQITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVS 129

Query: 121 NSKGSDAVLLFHQMNEEGVPVNSVTLLGLIPVCISPINLELGSSLHGSTLKYGLDSDVSV 180
           NSK S+AVLLF QMNEEGVPVNSVTLLGLIP C+SPINLELGSSLH STLKYG DSDVSV
Sbjct: 130 NSKCSEAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSV 189

Query: 181 VNCFITMYMKCDMVNHAQDLFDEMPDKGLISWNAMISGYAQNGLATNVLKLYHDMELRGV 240
           VNCFITMYMKC  VN+AQ LFDEMP KGLISWNAM+SGYAQNGLATNVL+LY +M++ GV
Sbjct: 190 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGV 249

Query: 241 HPDPVTLVGVLSSCANLGAQSVGREVECKIQASGFGRNPFLNNALINMYARCGNLAKAQT 300
           HPDPVTLVGVLSSCANLGAQSVG EVE KIQASGF  NPFLNNALINMYARCGNL KAQ 
Sbjct: 250 HPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQA 309

Query: 301 LFDETPEKTLVSWTAIIGG 319
           +FD  PE+TLVSWTAIIGG
Sbjct: 310 VFDGMPERTLVSWTAIIGG 328

[Close]

BLAST of MC01g_new0308 vs. ExPASy TrEMBL
Match: A0A5D3CAP8 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001430 PE=3 SV=1)

HSP 1 Score: 546 bits (1406), Expect = 5.53e-189
Identity = 266/319 (83.39%), Postives = 285/319 (89.34%), Query Frame = 0


Query: 1   MTVLSAPWNTRLRELAKRCQFLQALNLYFQMLRHGDRPNAFTFPFALKSCAALSLPILGA 60
           M  LS PWNT+LRELAKRCQFLQAL+LY QMLRHGDRPNAFTFPFALKSCAALS PILG 
Sbjct: 1   MNALSTPWNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALSHPILGG 60

Query: 61  QLHGQIVKLGCEAEPFVQTALISMYCRGSLVEDARKVFDENSQSRRLTVCYNALISGYVL 120
           Q HGQI+K+GC  EPFVQT LISMYC+GSLVE+ARKVFDEN  SR+LTVCYNALISGY  
Sbjct: 61  QFHGQIIKVGCIFEPFVQTGLISMYCKGSLVENARKVFDENFHSRKLTVCYNALISGYAS 120

Query: 121 NSKGSDAVLLFHQMNEEGVPVNSVTLLGLIPVCISPINLELGSSLHGSTLKYGLDSDVSV 180
           NSK SDAVLLF QMNEEG+PVNSVTLLGLIP C+SPINLELGSSLH STLKYG DSDVSV
Sbjct: 121 NSKCSDAVLLFRQMNEEGIPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSV 180

Query: 181 VNCFITMYMKCDMVNHAQDLFDEMPDKGLISWNAMISGYAQNGLATNVLKLYHDMELRGV 240
           VNCFITMYMKC  VN+AQ LFDEMP KGLISWNAM+SGYAQNGLATNVL+LY +M++ GV
Sbjct: 181 VNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGV 240

Query: 241 HPDPVTLVGVLSSCANLGAQSVGREVECKIQASGFGRNPFLNNALINMYARCGNLAKAQT 300
            PDP+TLVGVLSSCANLGAQSVG  VE KIQASGF  NPFLNNALINMYARCGNL KAQ+
Sbjct: 241 RPDPITLVGVLSSCANLGAQSVGHAVEFKIQASGFTNNPFLNNALINMYARCGNLTKAQS 300

Query: 301 LFDETPEKTLVSWTAIIGG 319
           +FD  PE+TLVSWTAIIGG
Sbjct: 301 VFDGMPERTLVSWTAIIGG 319

[Close]

BLAST of MC01g_new0308 vs. TAIR 10
Match: AT3G11460.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 401.0 bits (1029), Expect = 1.1e-111
Identity = 197/316 (62.34%), Postives = 243/316 (76.90%), Query Frame = 0


Query: 3   VLSAPWNTRLRELAKRCQFLQALNLYFQMLRHGDRPNAFTFPFALKSCAALSLPILGAQL 62
           V S PWN RLRELA +  F ++++LY  MLR G  P+AF+FPF LKSCA+LSLP+ G QL
Sbjct: 16  VASTPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQL 75

Query: 63  HGQIVKLGCEAEPFVQTALISMYCRGSLVEDARKVFDENSQSRRLTVCYNALISGYVLNS 122
           H  + K GCE EPFV TALISMYC+  LV DARKVF+EN QS +L+VCYNALISGY  NS
Sbjct: 76  HCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANS 135

Query: 123 KGSDAVLLFHQMNEEGVPVNSVTLLGLIPVCISPINLELGSSLHGSTLKYGLDSDVSVVN 182
           K +DA  +F +M E GV V+SVT+LGL+P+C  P  L LG SLHG  +K GLDS+V+V+N
Sbjct: 136 KVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLN 195

Query: 183 CFITMYMKCDMVNHAQDLFDEMPDKGLISWNAMISGYAQNGLATNVLKLYHDMELRGVHP 242
            FITMYMKC  V   + LFDEMP KGLI+WNA+ISGY+QNGLA +VL+LY  M+  GV P
Sbjct: 196 SFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCP 255

Query: 243 DPVTLVGVLSSCANLGAQSVGREVECKIQASGFGRNPFLNNALINMYARCGNLAKAQTLF 302
           DP TLV VLSSCA+LGA+ +G EV   ++++GF  N F++NA I+MYARCGNLAKA+ +F
Sbjct: 256 DPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVF 315

Query: 303 DETPEKTLVSWTAIIG 319
           D  P K+LVSWTA+IG
Sbjct: 316 DIMPVKSLVSWTAMIG 331

[Close]

BLAST of MC01g_new0308 vs. TAIR 10
Match: AT3G12770.1 (mitochondrial editing factor 22 )

HSP 1 Score: 214.9 bits (546), Expect = 1.1e-55
Identity = 109/313 (34.82%), Postives = 182/313 (58.15%), Query Frame = 0


Query: 7   PWNTRLRELAKRCQFLQALNLYFQMLRHGDRPNAFTFPFALKSCAALSLPILGAQLHGQI 66
           PWN  +R  ++   F  AL +Y  M      P++FTFP  LK+C+ LS   +G  +H Q+
Sbjct: 86  PWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQV 145

Query: 67  VKLGCEAEPFVQTALISMYCRGSLVEDARKVFDENSQSRRLTVCYNALISGYVLNSKGSD 126
            +LG +A+ FVQ  LI++Y +   +  AR VF+      R  V + A++S Y  N +  +
Sbjct: 146 FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPME 205

Query: 127 AVLLFHQMNEEGVPVNSVTLLGLIPVCISPINLELGSSLHGSTLKYGLDSDVSVVNCFIT 186
           A+ +F QM +  V  + V L+ ++       +L+ G S+H S +K GL+ +  ++    T
Sbjct: 206 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT 265

Query: 187 MYMKCDMVNHAQDLFDEMPDKGLISWNAMISGYAQNGLATNVLKLYHDMELRGVHPDPVT 246
           MY KC  V  A+ LFD+M    LI WNAMISGYA+NG A   + ++H+M  + V PD ++
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTIS 325

Query: 247 LVGVLSSCANLGAQSVGREVECKIQASGFGRNPFLNNALINMYARCGNLAKAQTLFDETP 306
           +   +S+CA +G+    R +   +  S +  + F+++ALI+M+A+CG++  A+ +FD T 
Sbjct: 326 ITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL 385

Query: 307 EKTLVSWTAIIGG 320
           ++ +V W+A+I G
Sbjct: 386 DRDVVVWSAMIVG 398

[Close]

BLAST of MC01g_new0308 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 209.5 bits (532), Expect = 4.7e-54
Identity = 120/343 (34.99%), Postives = 178/343 (51.90%), Query Frame = 0


Query: 8   WNTRLRELAKRCQFLQALNLYFQMLRHGDRPNAFTFPFALKSCAALSLPILGAQLHGQIV 67
           WNT  R  A     + AL LY  M+  G  PN++TFPF LKSCA       G Q+HG ++
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161

Query: 68  KLGCEAEPFVQTALISMYCRGSLVEDARKVFD-----------------------ENSQS 127
           KLGC+ + +V T+LISMY +   +EDA KVFD                       EN+Q 
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221

Query: 128 R------RLTVCYNALISGYVLNSKGSDAVLLFHQMNEEGVPVNSVTLLGLIPVCISPIN 187
                  +  V +NA+ISGY       +A+ LF  M +  V  +  T++ ++  C    +
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281

Query: 188 LELGSSLHGSTLKYGLDSDVSVVNCFITMYMKCDMVNHAQDLFDEMPDKGLISWNAMISG 247
           +ELG  +H     +G  S++ +VN  I +Y KC  +  A  LF+ +P K +ISWN +I G
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGG 341

Query: 248 YAQNGLATNVLKLYHDMELRGVHPDPVTLVGVLSSCANLGAQSVGREVECKI--QASGFG 307
           Y    L    L L+ +M   G  P+ VT++ +L +CA+LGA  +GR +   I  +  G  
Sbjct: 342 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVT 401

Query: 308 RNPFLNNALINMYARCGNLAKAQTLFDETPEKTLVSWTAIIGG 320
               L  +LI+MYA+CG++  A  +F+    K+L SW A+I G
Sbjct: 402 NASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFG 444

[Close]

BLAST of MC01g_new0308 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 203.4 bits (516), Expect = 3.3e-52
Identity = 117/364 (32.14%), Postives = 190/364 (52.20%), Query Frame = 0


Query: 8   WNTRLRELAKRCQFLQALNLYFQMLRHGDRPNAFTFPFALKSCAALSLPILGAQLHGQIV 67
           WN  + ELAK   F  ++ L+ +M+  G   +++TF    KS ++L     G QLHG I+
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222

Query: 68  KLGCEAEPFVQTALISMYCRGSLVEDARKVFDENSQSRRLTVCYNALISGYVLNSKGSDA 127
           K G      V  +L++ Y +   V+ ARKVFDE   + R  + +N++I+GYV N      
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDE--MTERDVISWNSIINGYVSNGLAEKG 282

Query: 128 VLLFHQMNEEGVPVNSVTLLGLIPVCISPINLELGSSLHGSTLKYGLDSDVSVVNCFITM 187
           + +F QM   G+ ++  T++ +   C     + LG ++H   +K     +    N  + M
Sbjct: 283 LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDM 342

Query: 188 YMKCDMVNHAQDLFDEMPDKGLISWNAMISGYAQNGLATNVLKLYHDMELRGVHPDPVTL 247
           Y KC  ++ A+ +F EM D+ ++S+ +MI+GYA+ GLA   +KL+ +ME  G+ PD  T+
Sbjct: 343 YSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 402

Query: 248 VGVLSSCANLGAQSVGREVECKIQASGFGRNPFLNNALINMYARCGNLAKAQTLFDETPE 307
             VL+ CA       G+ V   I+ +  G + F++NAL++MYA+CG++ +A+ +F E   
Sbjct: 403 TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 462

Query: 308 KTLVSWTAIIGG--------NMLDYTQILFSSAGMDEDVDRLRSVLDGIISLFQSAFFYH 364
           K ++SW  IIGG          L    +L        D   +  VL    SL  SAF   
Sbjct: 463 KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASL--SAFDKG 522

[Close]

BLAST of MC01g_new0308 vs. TAIR 10
Match: AT4G14850.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 199.9 bits (507), Expect = 3.7e-51
Identity = 109/312 (34.94%), Postives = 162/312 (51.92%), Query Frame = 0


Query: 8   WNTRLRELAKRCQFLQALNLYFQMLRHGDRPNAFTFPFALKSCAALSLPILGAQLHGQIV 67
           W + +  LA+   F  AL  +F+M R G  PN FTFP A K+ A+L LP+ G Q+H   V
Sbjct: 76  WTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAV 135

Query: 68  KLGCEAEPFVQTALISMYCRGSLVEDARKVFDENSQSRRLTVCYNALISGYVLNSKGSDA 127
           K G   + FV  +   MYC+  L +DARK+FDE  +    T  +NA IS  V + +  +A
Sbjct: 136 KCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLET--WNAFISNSVTDGRPREA 195

Query: 128 VLLFHQMNEEGVPVNSVTLLGLIPVCISPINLELGSSLHGSTLKYGLDSDVSVVNCFITM 187
           +  F +        NS+T    +  C   ++L LG  LHG  L+ G D+DVSV N  I  
Sbjct: 196 IEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDF 255

Query: 188 YMKCDMVNHAQDLFDEMPDKGLISWNAMISGYAQNGLATNVLKLYHDMELRGVHPDPVTL 247
           Y KC  +  ++ +F EM  K  +SW ++++ Y QN        LY       V      +
Sbjct: 256 YGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMI 315

Query: 248 VGVLSSCANLGAQSVGREVECKIQASGFGRNPFLNNALINMYARCGNLAKAQTLFDETPE 307
             VLS+CA +    +GR +      +   R  F+ +AL++MY +CG +  ++  FDE PE
Sbjct: 316 SSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPE 375

Query: 308 KTLVSWTAIIGG 320
           K LV+  ++IGG
Sbjct: 376 KNLVTRNSLIGG 385

The following BLAST results are available for this feature:

BLAST of MC01g_new0308 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CAY1	1.5e-110	62.34	Putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial OS...	[more]
Q9LTV8	1.6e-54	34.82	Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana OX...	[more]
Q9LN01	6.6e-53	34.99	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
Q9SN39	4.7e-51	32.14	Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t...	[more]
Q0WSH6	5.2e-50	34.94	Pentatricopeptide repeat-containing protein At4g14850 OS=Arabidopsis thaliana OX...	[more]

BLAST of MC01g_new0308 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132717.1	8.80e-230	100.00	putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial [M...	[more]
KAG7034495.1	2.06e-199	81.90	putative pentatricopeptide repeat-containing protein, mitochondrial, partial [Cu...	[more]
XP_023544808.1	7.66e-199	81.90	putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial [C...	[more]
XP_022925954.1	1.09e-198	81.90	putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial [C...	[more]
XP_022977443.1	1.12e-198	81.90	putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial [C...	[more]

BLAST of MC01g_new0308 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BUL8	4.26e-230	100.00	putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial OS...	[more]
A0A6J1EDM7	5.26e-199	81.90	putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial OS...	[more]
A0A6J1IQ02	5.44e-199	81.90	putative pentatricopeptide repeat-containing protein At3g11460, mitochondrial OS...	[more]
A0A0A0KFC9	1.13e-190	84.01	DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G4526...	[more]
A0A5D3CAP8	5.53e-189	83.39	Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa...	[more]

BLAST of MC01g_new0308 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11460.1	1.1e-111	62.34	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G12770.1	1.1e-55	34.82	mitochondrial editing factor 22	[more]
AT1G08070.1	4.7e-54	34.99	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G18750.1	3.3e-52	32.14	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G14850.1	3.7e-51	34.94	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 283..304 e-value: 0.0063 score: 16.7 coord: 79..100 e-value: 0.013 score: 15.7 coord: 181..209 e-value: 7.0E-4 score: 19.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 210..255 e-value: 9.5E-10 score: 38.5 coord: 108..150 e-value: 3.4E-8 score: 33.6
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 210..243 e-value: 2.1E-7 score: 28.7 coord: 78..100 e-value: 0.003 score: 15.6 coord: 109..142 e-value: 2.2E-6 score: 25.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 278..312 score: 8.812943
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 107..141 score: 9.13082
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 208..242 score: 11.081932
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 269..351 e-value: 8.5E-8 score: 33.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 156..268 e-value: 6.6E-23 score: 83.5 coord: 7..155 e-value: 1.4E-23 score: 85.7
None	No IPR available	PANTHER	PTHR24015:SF505	OS01G0819800 PROTEIN	coord: 5..319
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 5..319

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g_new0308.1	MC01g_new0308.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding