MC01g_new0257 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC01g_new0257
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description30S ribosomal protein S31, chloroplastic
LocationMC01: 10385899 .. 10387137 (+)
RNA-Seq ExpressionMC01g_new0257
SyntenyMC01g_new0257
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTTCATAAAGAGCGCCAATCTGATATCTTGTCGAAGCTCCGGAGGCCCAGGCGGGTCGACTATAAAAGCTGGATCTTATCAGTCACATTCTCCACCCGAAACTTATCTTCGTGGTTCTCCCAGAAGCTTGCTCAATTTTCATTCATCCATGGCTTCACTTCCTTTCGGGCTTCTTCAAGCCGCTTCTCAATCTCCAACTCTTTCTCCTCGATTTTTCTCTTTCTCCAAATCCGAAACCCTAGGAACTTCTCTGCGTGCTTCTACTGCTTCTCTTGCGACCTCTGCAACTTCGTCTCCTTCTTCGGTTCCTGCTGGTATGCAATTCTTAAAACATTTCCAAGTGTTTGCATCTCTGTTCAGTTTCTATCGCCTGAATTTTGTTCTGTGTTTGCTTTTTCAGTGTATTGTGGCAGAGGCGATAAGAAAACGGAGAAAGGAAAGCGGTTCAATCACTCTTACGGAAATGTAAGCATCTCTATATCCTCTATTCGTTTTCTTGATTTTCTTATCTGGTTTTGAGTTCTTTTGTTGTCTTGTATGAGTTCTCTTTGGCATTTGGTTTTGAATTTTTTTGGGGGAAAAATGTTCAGGCAAGGCCTCGGGATAAGACGAAAGGGAGAGGGACTCCGAGAGTACCTACTCCGCCTGCTCCGCCTAGGAAAGATAAATTTGAGGATGATGAGAAAATTAAGATCGAGATTGACGACTCTCTGTTCGCTAGGTAGTCATGGAGCAACCTACTTCTGTTTATTTGAATGTGTTTTATAAATCCAGAAGGTACTTCAACTTCCTATATTCGCATTATTTTGTATGAATCCTTCAGTCGTTCATTGGCTTCGTGAATCCATTGTTTGTTTTCAGTCTACTTGTTCTTTCCCTAAGGAAATTACTCGAAGTATGCTCTCTCTCTCTCTGATTTTTAACCATTTCTGAGCTAGATTCTGACTAGTCCTACAACATAGGTGATCTGCATCATTAGTTGCCGTTTGTTGCTTTCTTCTCAAAGGAAATTGAAGTTAGCTTCCTCCTCAGTGGTTACCGAAGTCTAAGGTTGAGCTATTTAAGATTAACGTTGGATGCCAAAAGAATTTAGCAGCTTCATTTTTGTTTGACAAATCTCTTTTCAGTTGTCTTGGTTTTGCTTTATAGGGAAGATTTCAATTGCTTGTTTATCCACCAAGTTCTGAGCGGAGTTTGGGCGGATTTATCCAATATTATCTCTGAAATAGACTGA

mRNA sequence

ATGTCGTTCATAAAGAGCGCCAATCTGATATCTTGTCGAAGCTCCGGAGGCCCAGGCGGGTCGACTATAAAAGCTGGATCTTATCAGTCACATTCTCCACCCGAAACTTATCTTCGTGGTTCTCCCAGAAGCTTGCTCAATTTTCATTCATCCATGGCTTCACTTCCTTTCGGGCTTCTTCAAGCCGCTTCTCAATCTCCAACTCTTTCTCCTCGATTTTTCTCTTTCTCCAAATCCGAAACCCTAGGAACTTCTCTGCGTGCTTCTACTGCTTCTCTTGCGACCTCTGCAACTTCGTCTCCTTCTTCGGTTCCTGCTGTGTATTGTGGCAGAGGCGATAAGAAAACGGAGAAAGGAAAGCGGTTCAATCACTCTTACGGAAATGCAAGGCCTCGGGATAAGACGAAAGGGAGAGGGACTCCGAGAGTACCTACTCCGCCTGCTCCGCCTAGGAAAGATAAATTTGAGGATGATGAGAAAATTAAGATCGAGATTGACGACTCTCTGTTCGCTAGGGAAGATTTCAATTGCTTGTTTATCCACCAAGTTCTGAGCGGAGTTTGGGCGGATTTATCCAATATTATCTCTGAAATAGACTGA

Coding sequence (CDS)

ATGTCGTTCATAAAGAGCGCCAATCTGATATCTTGTCGAAGCTCCGGAGGCCCAGGCGGGTCGACTATAAAAGCTGGATCTTATCAGTCACATTCTCCACCCGAAACTTATCTTCGTGGTTCTCCCAGAAGCTTGCTCAATTTTCATTCATCCATGGCTTCACTTCCTTTCGGGCTTCTTCAAGCCGCTTCTCAATCTCCAACTCTTTCTCCTCGATTTTTCTCTTTCTCCAAATCCGAAACCCTAGGAACTTCTCTGCGTGCTTCTACTGCTTCTCTTGCGACCTCTGCAACTTCGTCTCCTTCTTCGGTTCCTGCTGTGTATTGTGGCAGAGGCGATAAGAAAACGGAGAAAGGAAAGCGGTTCAATCACTCTTACGGAAATGCAAGGCCTCGGGATAAGACGAAAGGGAGAGGGACTCCGAGAGTACCTACTCCGCCTGCTCCGCCTAGGAAAGATAAATTTGAGGATGATGAGAAAATTAAGATCGAGATTGACGACTCTCTGTTCGCTAGGGAAGATTTCAATTGCTTGTTTATCCACCAAGTTCTGAGCGGAGTTTGGGCGGATTTATCCAATATTATCTCTGAAATAGACTGA

Protein sequence

MSFIKSANLISCRSSGGPGGSTIKAGSYQSHSPPETYLRGSPRSLLNFHSSMASLPFGLLQAASQSPTLSPRFFSFSKSETLGTSLRASTASLATSATSSPSSVPAVYCGRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPTPPAPPRKDKFEDDEKIKIEIDDSLFAREDFNCLFIHQVLSGVWADLSNIISEID
Homology
[Close]
BLAST of MC01g_new0257 vs. ExPASy Swiss-Prot
Match: O80439 (30S ribosomal protein S31, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS31 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.3e-28
Identity = 69/97 (71.13%), Postives = 79/97 (81.44%), Query Frame = 0 

Query: 75  SFSKSETLGTSLRASTASLATSATSSPSSVPAVYCGRGDKKTEKGKRFNHSYGNARPRDK 134
           S S SET G SL   T   + S TSS SS+P VYCGRGD+KT KGKRFNHS+GNARPR+K
Sbjct: 22  SSSHSETAGVSLSCFTHQFSLS-TSSSSSIPLVYCGRGDRKTAKGKRFNHSFGNARPRNK 81

Query: 135 TKGRGTPRVPTPPAPPRKDKFEDDEKIKIEIDDSLFA 172
           +KGRG  RVP PPAPPRKDKFE+DEKIKI+ID+SLF+
Sbjct: 82  SKGRGPERVPVPPAPPRKDKFENDEKIKIDIDESLFS 117

[Close]
BLAST of MC01g_new0257 vs. ExPASy Swiss-Prot
Match: P47910 (30S ribosomal protein S31, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPS31 PE=1 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 6.9e-14
Identity = 51/98 (52.04%), Postives = 68/98 (69.39%), Query Frame = 0 

Query: 52  MASLPFGLLQAASQSPTLSPRFFSFSKSETL-GTSLRA-STASLATSATSSPSSVPAVYC 111
           MASL  G    A  S +     FSFS S+++ G SL +  T SL++S ++SP ++P +YC
Sbjct: 1   MASLLLGTPSMACHSVS-----FSFSHSQSVAGVSLSSPPTLSLSSSVSTSP-ALPLIYC 60

Query: 112 GRGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPTPP 148
           GRGD+KT KGKRFNHS+GNARP++K KGRG P+ P  P
Sbjct: 61  GRGDRKTAKGKRFNHSFGNARPKNKNKGRGPPKAPIFP 92

[Close]
BLAST of MC01g_new0257 vs. ExPASy Swiss-Prot
Match: P47909 (30S ribosomal protein S31, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0528100 PE=3 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 1.7e-04
Identity = 28/46 (60.87%), Postives = 32/46 (69.57%), Query Frame = 0 

Query: 106 AVYCGRGDKKTEKGKRFNHSYGNARP-RDKTKGRGTPRVPTPPAPP 151
           AV CGRGDKKT++GKRF  SYGNARP R+K   R   RV  P + P
Sbjct: 29  AVTCGRGDKKTKRGKRFKGSYGNARPKREKKIERIKDRVEVPRSTP 74

[Close]
BLAST of MC01g_new0257 vs. NCBI nr
Match: XP_022151467.1 (30S ribosomal protein S31, chloroplastic [Momordica charantia])

HSP 1 Score: 322 bits (826), Expect = 2.89e-110
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0 

Query: 1   MSFIKSANLISCRSSGGPGGSTIKAGSYQSHSPPETYLRGSPRSLLNFHSSMASLPFGLL 60
           MSFIKSANLISCRSSGGPGGSTIKAGSYQSHSPPETYLRGSPRSLLNFHSSMASLPFGLL
Sbjct: 1   MSFIKSANLISCRSSGGPGGSTIKAGSYQSHSPPETYLRGSPRSLLNFHSSMASLPFGLL 60

Query: 61  QAASQSPTLSPRFFSFSKSETLGTSLRASTASLATSATSSPSSVPAVYCGRGDKKTEKGK 120
           QAASQSPTLSPRFFSFSKSETLGTSLRASTASLATSATSSPSSVPAVYCGRGDKKTEKGK
Sbjct: 61  QAASQSPTLSPRFFSFSKSETLGTSLRASTASLATSATSSPSSVPAVYCGRGDKKTEKGK 120

Query: 121 RFNHSYGNARPRDKTKGRGTPRVPTPPAPPRKDKFEDDEKIKIEIDDSLFAR 172
           RFNHSYGNARPRDKTKGRGTPRVPTPPAPPRKDKFEDDEKIKIEIDDSLFAR
Sbjct: 121 RFNHSYGNARPRDKTKGRGTPRVPTPPAPPRKDKFEDDEKIKIEIDDSLFAR 172

[Close]
BLAST of MC01g_new0257 vs. NCBI nr
Match: XP_038882305.1 (30S ribosomal protein S31, chloroplastic [Benincasa hispida])

HSP 1 Score: 209 bits (533), Expect = 2.24e-66
Identity = 114/121 (94.21%), Postives = 118/121 (97.52%), Query Frame = 0 

Query: 52  MASLPFGLLQAASQSPTLSPRFFSFSKSETLGTSLRAS-TASLATSATSSPSSVPAVYCG 111
           MASLPFGLLQAASQSPTLSPRFFSFSKSETLGTSLRAS TASLATS TSSPSS+PAVYCG
Sbjct: 1   MASLPFGLLQAASQSPTLSPRFFSFSKSETLGTSLRASSTASLATSTTSSPSSIPAVYCG 60

Query: 112 RGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPTPPAPPRKDKFEDDEKIKIEIDDSLF 171
           RGDKKTEKGKRFN SYGNARPR+KTKGRGTPRVPTPP+PPRKDKFEDDEKIKIEID+SLF
Sbjct: 61  RGDKKTEKGKRFNRSYGNARPRNKTKGRGTPRVPTPPSPPRKDKFEDDEKIKIEIDESLF 120

[Close]
BLAST of MC01g_new0257 vs. NCBI nr
Match: XP_008449316.1 (PREDICTED: 30S ribosomal protein S31, chloroplastic [Cucumis melo] >KAA0045031.1 30S ribosomal protein S31 [Cucumis melo var. makuwa] >TYJ96295.1 30S ribosomal protein S31 [Cucumis melo var. makuwa])

HSP 1 Score: 198 bits (504), Expect = 5.76e-62
Identity = 106/121 (87.60%), Postives = 114/121 (94.21%), Query Frame = 0 

Query: 52  MASLPFGLLQAASQSPTLSPRFFSFSKSETLGTSLRAS-TASLATSATSSPSSVPAVYCG 111
           M SLPFGLLQA SQSP+L+P +FSFSKSETLGTSLRAS TASLA S  SSPSS+PAVYCG
Sbjct: 1   MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCG 60

Query: 112 RGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPTPPAPPRKDKFEDDEKIKIEIDDSLF 171
           RGDKKTE+GKRFNHSYGNARPRDKTKGRGTPRVPTPP+PPRKDKF+DDEKIKIEID+SLF
Sbjct: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF 120

[Close]
BLAST of MC01g_new0257 vs. NCBI nr
Match: XP_022931892.1 (30S ribosomal protein S31, chloroplastic-like [Cucurbita moschata] >XP_022966545.1 30S ribosomal protein S31, chloroplastic [Cucurbita maxima] >KAG6595386.1 30S ribosomal protein S31, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027394.1 30S ribosomal protein S31, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 197 bits (501), Expect = 1.45e-61
Identity = 106/121 (87.60%), Postives = 112/121 (92.56%), Query Frame = 0 

Query: 52  MASLPFGLLQAASQSPTLSPRFFSFSKSETLGTSLRASTASLATSATSSPSSVPAVYCGR 111
           MASLPFGLLQA  QSPTLSPR FSFSKSETLGTSLR ST    TSATSSPSS+PAVYCGR
Sbjct: 1   MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTSTG---TSATSSPSSIPAVYCGR 60

Query: 112 GDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPTPPAPPRKDKFEDDEKIKIEIDDSLFA 171
           GDKKTEKGKRF HS+GNARPRDKTKGRGTPRVPTPP+PPRKDKF+DDEKIKIEID+SLF+
Sbjct: 61  GDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLFS 118

[Close]
BLAST of MC01g_new0257 vs. NCBI nr
Match: XP_023517799.1 (30S ribosomal protein S31, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 195 bits (495), Expect = 1.18e-60
Identity = 105/121 (86.78%), Postives = 111/121 (91.74%), Query Frame = 0 

Query: 52  MASLPFGLLQAASQSPTLSPRFFSFSKSETLGTSLRASTASLATSATSSPSSVPAVYCGR 111
           MASLPFGLLQA  QSPTLSPR FSFSKSETLGTSLR ST     SATSSPSS+PAVYCGR
Sbjct: 1   MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTSTG---ISATSSPSSIPAVYCGR 60

Query: 112 GDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPTPPAPPRKDKFEDDEKIKIEIDDSLFA 171
           GDKKTEKGKRF HS+GNARPRDKTKGRGTPRVPTPP+PPRKDKF+DDEKIKIEID+SLF+
Sbjct: 61  GDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLFS 118

[Close]
BLAST of MC01g_new0257 vs. ExPASy TrEMBL
Match: A0A6J1DDL3 (30S ribosomal protein S31, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111019400 PE=3 SV=1)

HSP 1 Score: 322 bits (826), Expect = 1.40e-110
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0 

Query: 1   MSFIKSANLISCRSSGGPGGSTIKAGSYQSHSPPETYLRGSPRSLLNFHSSMASLPFGLL 60
           MSFIKSANLISCRSSGGPGGSTIKAGSYQSHSPPETYLRGSPRSLLNFHSSMASLPFGLL
Sbjct: 1   MSFIKSANLISCRSSGGPGGSTIKAGSYQSHSPPETYLRGSPRSLLNFHSSMASLPFGLL 60

Query: 61  QAASQSPTLSPRFFSFSKSETLGTSLRASTASLATSATSSPSSVPAVYCGRGDKKTEKGK 120
           QAASQSPTLSPRFFSFSKSETLGTSLRASTASLATSATSSPSSVPAVYCGRGDKKTEKGK
Sbjct: 61  QAASQSPTLSPRFFSFSKSETLGTSLRASTASLATSATSSPSSVPAVYCGRGDKKTEKGK 120

Query: 121 RFNHSYGNARPRDKTKGRGTPRVPTPPAPPRKDKFEDDEKIKIEIDDSLFAR 172
           RFNHSYGNARPRDKTKGRGTPRVPTPPAPPRKDKFEDDEKIKIEIDDSLFAR
Sbjct: 121 RFNHSYGNARPRDKTKGRGTPRVPTPPAPPRKDKFEDDEKIKIEIDDSLFAR 172

[Close]
BLAST of MC01g_new0257 vs. ExPASy TrEMBL
Match: A0A5A7TU27 (30S ribosomal protein S31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00930 PE=3 SV=1)

HSP 1 Score: 198 bits (504), Expect = 2.79e-62
Identity = 106/121 (87.60%), Postives = 114/121 (94.21%), Query Frame = 0 

Query: 52  MASLPFGLLQAASQSPTLSPRFFSFSKSETLGTSLRAS-TASLATSATSSPSSVPAVYCG 111
           M SLPFGLLQA SQSP+L+P +FSFSKSETLGTSLRAS TASLA S  SSPSS+PAVYCG
Sbjct: 1   MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCG 60

Query: 112 RGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPTPPAPPRKDKFEDDEKIKIEIDDSLF 171
           RGDKKTE+GKRFNHSYGNARPRDKTKGRGTPRVPTPP+PPRKDKF+DDEKIKIEID+SLF
Sbjct: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF 120

[Close]
BLAST of MC01g_new0257 vs. ExPASy TrEMBL
Match: A0A1S3BL51 (30S ribosomal protein S31, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491228 PE=3 SV=1)

HSP 1 Score: 198 bits (504), Expect = 2.79e-62
Identity = 106/121 (87.60%), Postives = 114/121 (94.21%), Query Frame = 0 

Query: 52  MASLPFGLLQAASQSPTLSPRFFSFSKSETLGTSLRAS-TASLATSATSSPSSVPAVYCG 111
           M SLPFGLLQA SQSP+L+P +FSFSKSETLGTSLRAS TASLA S  SSPSS+PAVYCG
Sbjct: 1   MGSLPFGLLQAPSQSPSLNPHYFSFSKSETLGTSLRASSTASLAISTPSSPSSIPAVYCG 60

Query: 112 RGDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPTPPAPPRKDKFEDDEKIKIEIDDSLF 171
           RGDKKTE+GKRFNHSYGNARPRDKTKGRGTPRVPTPP+PPRKDKF+DDEKIKIEID+SLF
Sbjct: 61  RGDKKTERGKRFNHSYGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLF 120

[Close]
BLAST of MC01g_new0257 vs. ExPASy TrEMBL
Match: A0A6J1HRX4 (30S ribosomal protein S31, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466195 PE=3 SV=1)

HSP 1 Score: 197 bits (501), Expect = 7.01e-62
Identity = 106/121 (87.60%), Postives = 112/121 (92.56%), Query Frame = 0 

Query: 52  MASLPFGLLQAASQSPTLSPRFFSFSKSETLGTSLRASTASLATSATSSPSSVPAVYCGR 111
           MASLPFGLLQA  QSPTLSPR FSFSKSETLGTSLR ST    TSATSSPSS+PAVYCGR
Sbjct: 1   MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTSTG---TSATSSPSSIPAVYCGR 60

Query: 112 GDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPTPPAPPRKDKFEDDEKIKIEIDDSLFA 171
           GDKKTEKGKRF HS+GNARPRDKTKGRGTPRVPTPP+PPRKDKF+DDEKIKIEID+SLF+
Sbjct: 61  GDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLFS 118

[Close]
BLAST of MC01g_new0257 vs. ExPASy TrEMBL
Match: A0A6J1EV33 (30S ribosomal protein S31, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111438171 PE=3 SV=1)

HSP 1 Score: 197 bits (501), Expect = 7.01e-62
Identity = 106/121 (87.60%), Postives = 112/121 (92.56%), Query Frame = 0 

Query: 52  MASLPFGLLQAASQSPTLSPRFFSFSKSETLGTSLRASTASLATSATSSPSSVPAVYCGR 111
           MASLPFGLLQA  QSPTLSPR FSFSKSETLGTSLR ST    TSATSSPSS+PAVYCGR
Sbjct: 1   MASLPFGLLQATFQSPTLSPRCFSFSKSETLGTSLRTSTG---TSATSSPSSIPAVYCGR 60

Query: 112 GDKKTEKGKRFNHSYGNARPRDKTKGRGTPRVPTPPAPPRKDKFEDDEKIKIEIDDSLFA 171
           GDKKTEKGKRF HS+GNARPRDKTKGRGTPRVPTPP+PPRKDKF+DDEKIKIEID+SLF+
Sbjct: 61  GDKKTEKGKRFKHSFGNARPRDKTKGRGTPRVPTPPSPPRKDKFDDDEKIKIEIDESLFS 118

[Close]
BLAST of MC01g_new0257 vs. TAIR 10
Match: AT2G38140.1 (plastid-specific ribosomal protein 4 )

HSP 1 Score: 127.9 bits (320), Expect = 9.3e-30
Identity = 69/97 (71.13%), Postives = 79/97 (81.44%), Query Frame = 0 

Query: 75  SFSKSETLGTSLRASTASLATSATSSPSSVPAVYCGRGDKKTEKGKRFNHSYGNARPRDK 134
           S S SET G SL   T   + S TSS SS+P VYCGRGD+KT KGKRFNHS+GNARPR+K
Sbjct: 22  SSSHSETAGVSLSCFTHQFSLS-TSSSSSIPLVYCGRGDRKTAKGKRFNHSFGNARPRNK 81

Query: 135 TKGRGTPRVPTPPAPPRKDKFEDDEKIKIEIDDSLFA 172
           +KGRG  RVP PPAPPRKDKFE+DEKIKI+ID+SLF+
Sbjct: 82  SKGRGPERVPVPPAPPRKDKFENDEKIKIDIDESLFS 117

The following BLAST results are available for this feature:
BLAST of MC01g_new0257 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O804391.3e-2871.1330S ribosomal protein S31, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS3... [more]
P479106.9e-1452.0430S ribosomal protein S31, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPS31 P... [more]
P479091.7e-0460.8730S ribosomal protein S31, mitochondrial OS=Oryza sativa subsp. japonica OX=3994... [more]
BLAST of MC01g_new0257 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022151467.12.89e-110100.0030S ribosomal protein S31, chloroplastic [Momordica charantia][more]
XP_038882305.12.24e-6694.2130S ribosomal protein S31, chloroplastic [Benincasa hispida][more]
XP_008449316.15.76e-6287.60PREDICTED: 30S ribosomal protein S31, chloroplastic [Cucumis melo] >KAA0045031.1... [more]
XP_022931892.11.45e-6187.6030S ribosomal protein S31, chloroplastic-like [Cucurbita moschata] >XP_022966545... [more]
XP_023517799.11.18e-6086.7830S ribosomal protein S31, chloroplastic [Cucurbita pepo subsp. pepo][more]
BLAST of MC01g_new0257 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DDL31.40e-110100.0030S ribosomal protein S31, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11... [more]
A0A5A7TU272.79e-6287.6030S ribosomal protein S31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A1S3BL512.79e-6287.6030S ribosomal protein S31, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491228... [more]
A0A6J1HRX47.01e-6287.6030S ribosomal protein S31, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11146... [more]
A0A6J1EV337.01e-6287.6030S ribosomal protein S31, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L... [more]
BLAST of MC01g_new0257 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G38140.19.3e-3071.13plastid-specific ribosomal protein 4 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR03082630S ribosomal proteinTIGRFAMTIGR04560TIGR04560coord: 110..134
e-value: 3.1E-10
score: 37.9
IPR03082630S ribosomal proteinPFAMPF17067RPS31coord: 72..153
e-value: 1.4E-31
score: 108.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..36
NoneNo IPR availablePANTHERPTHR34550:SF230S RIBOSOMAL PROTEIN S31, CHLOROPLASTICcoord: 52..170
IPR04469530S ribosomal protein S31, plantPANTHERPTHR3455030S RIBOSOMAL PROTEIN S31, CHLOROPLASTICcoord: 52..170

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC01g_new0257.1MC01g_new0257.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032544 plastid translation
cellular_component GO:0009507 chloroplast
cellular_component GO:0005840 ribosome
molecular_function GO:0003729 mRNA binding