MC01g_new0243 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g_new0243
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Transmembrane protein 18
Location	MC01: 9736667 .. 9738499 (-)
RNA-Seq Expression	MC01g_new0243
Synteny	MC01g_new0243

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAACGAAGGAGATTCTTTTCGGCGGTGTTGAGAGCAAAACGCTGCCGTTTCATATTTCGATTTCAGATCCGAGCAAGAAATTGGGTCGAAGAAGAACCCCGAAGATTATCCGAAGATCGAGAAGACGAAATCCGAGACTGAGACTGTAAACTCCATTATCAAGAAATTGGGTTTTTTGGAGCTTCAATTTGATTTTTACTTGATGGAGGAGTTGCGATCCGCAATGGAGGAACATATGGACCAAATGGCGGATCTGATTCACAAATTATCCTCCGAACTCCGATCCGGTCTTCGTCCCGCCGTCGATAATTTCATCGGTTTCTTCCACGCCATTGGCTGGAAGGTACTCCCCTACTCTCTCCTTTTAGACCACATGAAATTTATTTATGTTTCCTTTGGAGTTTGTTTTTCAATCTGGAACTGTGTGAATTTAAGTATTCGAAATCAAATTTGTTTATATGTTTCAACGTTTTGCAGGAACCTTGGTTGATGGGGTTACTGGGTTTTCATGCCTTGTTGCTGATAATCACTATTGTTACCAGGAAGCGTACCAATTTCCAGATGTTCTTGTTCCTTCTTGCACGTATGATTATTACTTCCATTTGCTCTGTATCTGTGCTTTTGCAATGTTGAAATGTTTTGTTGCTGTTCTGTTCATATTGCATCCTCTTTACTGGCGAAGTAGTAAGATTTGGTCTAGCCATCTAGGTTATGAAAATTTACTACTTTTTGAGCTTGGAGACGAATTCTGAGGTTTAATTATCTTTTGGGAATTATTGCTGTGTTCACATTGCAATCAGAGAATTATATTTGCGAACTGGAATTTATGTTGGTGATCAATGTTTCATATACTTGTGTAATTTCCAACCTTCAGATATTTGTTTAAACTTTAATCCTGTTGTATTTCTGACTATTGTAAATTAATTGATCTCTCTATTTTTCAATCTCATTCTGCTTGTTGTAGAAAGTATAAGGTGGAAGATCAAATGTTTTAAATGTCATTTCCTTCACATTCAGTTCATGTTCACATTTTCATATATTGAGAATGGCCTACCCTTTCAGGGAGAAGAAATCCTTTTTGCATACAACAAAAATTCTTTCATGCTTATAATTTCAATGTTAATACATGCCTGTGGATACAGTTTATATTAACATTTTATAGGTTCATATGAAGATTTGCATTAATTTCTCAATTCTCATTTTAAGAGGTCCTTTTTGCAGTGGCTGGTGTATACTTTGCTGAAAGAATCAATAGAATCCTGAGCAAAAACTGGAAGAATTTTGCCACCCAGAACTATTTCGATCCAAATGGAGTTTTCCTATCGACACTCTGGTCTGGGCCGCTGCTTGTAATTTCGATGATAATCCTGGCAAGTGCTTGTGGTTACTTGTTTTTCTCAAGCCCCTAATAGACCCCAACATCTCCAATCACTCACTCTTGAATGAAATTGCTTTTCGTTTTCTGGTTTAAGAACATCTAACTGAACTCTCTCATTTCTGTATGGCAGATAAACACACTCTTGACTTTATGCTTTCTAGTGGTTAGATGGAAAAGAGCCGAGCTTCAACACCGTGCAAGACTTTCGCAGAGTAAAGAAGATTAACCCCCAGAAGTGAAGTTTCTTTAGCTTTAATGTCTTTTGCTGATAGTTTGTAGCTATACCATATCCTTTACTGAGACTATTAGACTGATACGAGCAGAATGTGAGGAGCGGTTTTGTTTACACCTTTTCTCTTATTTATTGAATAGCCTACGTAGATATTATTGTGATCAAACTTTATACCACATTCACTTCATATAGCTTGAATTTCACCATTGAGTAGTCTTTTC

mRNA sequence

ATGGAGGAGTTGCGATCCGCAATGGAGGAACATATGGACCAAATGGCGGATCTGATTCACAAATTATCCTCCGAACTCCGATCCGGTCTTCGTCCCGCCGTCGATAATTTCATCGGTTTCTTCCACGCCATTGGCTGGAAGGAACCTTGGTTGATGGGGTTACTGGGTTTTCATGCCTTGTTGCTGATAATCACTATTGTTACCAGGAAGCGTACCAATTTCCAGATGTTCTTGTTCCTTCTTGCACTGGCTGGTGTATACTTTGCTGAAAGAATCAATAGAATCCTGAGCAAAAACTGGAAGAATTTTGCCACCCAGAACTATTTCGATCCAAATGGAGTTTTCCTATCGACACTCTGGTCTGGGCCGCTGCTTGTAATTTCGATGATAATCCTGATAAACACACTCTTGACTTTATGCTTTCTAGTGGTTAGATGGAAAAGAGCCGAGCTTCAACACCGTGCAAGACTTTCGCAGAGTAAAGAAGATTAA

Coding sequence (CDS)

ATGGAGGAGTTGCGATCCGCAATGGAGGAACATATGGACCAAATGGCGGATCTGATTCACAAATTATCCTCCGAACTCCGATCCGGTCTTCGTCCCGCCGTCGATAATTTCATCGGTTTCTTCCACGCCATTGGCTGGAAGGAACCTTGGTTGATGGGGTTACTGGGTTTTCATGCCTTGTTGCTGATAATCACTATTGTTACCAGGAAGCGTACCAATTTCCAGATGTTCTTGTTCCTTCTTGCACTGGCTGGTGTATACTTTGCTGAAAGAATCAATAGAATCCTGAGCAAAAACTGGAAGAATTTTGCCACCCAGAACTATTTCGATCCAAATGGAGTTTTCCTATCGACACTCTGGTCTGGGCCGCTGCTTGTAATTTCGATGATAATCCTGATAAACACACTCTTGACTTTATGCTTTCTAGTGGTTAGATGGAAAAGAGCCGAGCTTCAACACCGTGCAAGACTTTCGCAGAGTAAAGAAGATTAA

Protein sequence

MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIGWKEPWLMGLLGFHALLLIITIVTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLWSGPLLVISMIILINTLLTLCFLVVRWKRAELQHRARLSQSKED

Homology

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BLAST of MC01g_new0243 vs. ExPASy Swiss-Prot
Match: Q6DGF8 (Transmembrane protein 18 OS=Rattus norvegicus OX=10116 GN=Tmem18 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 8.8e-15
Identity = 44/118 (37.29%), Postives = 69/118 (58.47%), Query Frame = 0


Query: 46  WKEPWLMGLLGFHALLLIITIVTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFAT 105
           W EPWL+GLL FH L L++T  + +R   Q+  FL  +  VY AE IN + + NW+ FA 
Sbjct: 23  WTEPWLLGLLAFHLLCLLLTCFSAQRYKLQIGHFLCLVVLVYCAEYINEVAAMNWRLFAK 82

Query: 106 QNYFDPNGVFLSTLWSGPLLVISMIILINTLLTLCFLVVRWKRAELQHRARLSQSKED 164
             YFD  G+F+S ++S PLL  +M+I+I  +     ++   K  + + + R  + KE+
Sbjct: 83  YQYFDSRGMFISLVFSAPLLFNAMVIVIMWVRKTLTVMSDLKNLQERRKERKRRRKEE 140

[Close]

BLAST of MC01g_new0243 vs. ExPASy Swiss-Prot
Match: Q3SZ36 (Transmembrane protein 18 OS=Bos taurus OX=9913 GN=TMEM18 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-14
Identity = 42/117 (35.90%), Postives = 68/117 (58.12%), Query Frame = 0


Query: 46  WKEPWLMGLLGFHALLLIITIVTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFAT 105
           W EPWL+GL GFH L L++T  + +R   Q+  FL  +  VY AE IN + + NW+ F+ 
Sbjct: 23  WTEPWLVGLAGFHVLCLLLTCFSSQRYRLQVGHFLCLVTLVYCAEYINEVAAMNWRLFSK 82

Query: 106 QNYFDPNGVFLSTLWSGPLLVISMIILINTLLTLCFLVVRWKRAELQHRARLSQSKE 163
             YFD  G+F+S ++S PLL+ +++I++  +     ++   +    Q RAR    +E
Sbjct: 83  HQYFDSRGMFISLVFSAPLLLNALVIVVLWVRKTLVVMTDLRSLREQRRARARPKEE 139

[Close]

BLAST of MC01g_new0243 vs. ExPASy Swiss-Prot
Match: Q96B42 (Transmembrane protein 18 OS=Homo sapiens OX=9606 GN=TMEM18 PE=1 SV=2)

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-14
Identity = 44/118 (37.29%), Postives = 70/118 (59.32%), Query Frame = 0


Query: 46  WKEPWLMGLLGFHALLLIITIVTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFAT 105
           W EPWLMGL  FHAL +++T ++ +    Q+  FL  +  VY AE IN   + NW+ F+ 
Sbjct: 23  WTEPWLMGLATFHALCVLLTCLSSRSYRLQIGHFLCLVILVYCAEYINEAAAMNWRLFSK 82

Query: 106 QNYFDPNGVFLSTLWSGPLLVISMIILINTLLTLCFLVVRWKRAELQHRARLSQSKED 164
             YFD  G+F+S ++S PLLV +MII++  +     ++   K A+ + + +  + KED
Sbjct: 83  YQYFDSRGMFISIVFSAPLLVNAMIIVVMWVWKTLNVMTDLKNAQERRKEKKRRRKED 140

[Close]

BLAST of MC01g_new0243 vs. ExPASy Swiss-Prot
Match: Q3TUD9 (Transmembrane protein 18 OS=Mus musculus OX=10090 GN=Tmem18 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.0e-14
Identity = 43/118 (36.44%), Postives = 69/118 (58.47%), Query Frame = 0


Query: 46  WKEPWLMGLLGFHALLLIITIVTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFAT 105
           W EPWL+GLL FH L L++T  + +R   Q+  FL  +  VY AE IN + + NW+ F+ 
Sbjct: 23  WTEPWLLGLLAFHLLCLLLTCFSSQRYKLQIGHFLCLVVLVYSAEYINEVAAVNWRLFSK 82

Query: 106 QNYFDPNGVFLSTLWSGPLLVISMIILINTLLTLCFLVVRWKRAELQHRARLSQSKED 164
             YFD  G+F+S ++S PLL  +M+I+I  +     ++   K  + + + R  + KE+
Sbjct: 83  YQYFDSRGMFISLVFSAPLLFNAMLIVIMWVRKTLTVMTDLKTLQEERKERRRRRKEE 140

[Close]

BLAST of MC01g_new0243 vs. ExPASy Swiss-Prot
Match: Q641M3 (Transmembrane protein 18 OS=Danio rerio OX=7955 GN=tmem18 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.6e-14
Identity = 44/122 (36.07%), Postives = 70/122 (57.38%), Query Frame = 0


Query: 40  FFHAIGWKEPWLMGLLGFHALLLIITIVTRKRTNFQMFLFLLALAGVYFAERINRILSKN 99
           F  ++ W EPWLM LL FH      T+++ K    Q+  FLL +A VY AE +N + + N
Sbjct: 28  FLQSVDWSEPWLMALLAFHVFCFAFTLLSCKYYRIQICHFLLMVAMVYSAEYLNELAAMN 87

Query: 100 WKNFATQNYFDPNGVFLSTLWSGPLLVISMIIL-------INTLLTLCFLVVRWKRAELQ 155
           W++F+   YFD  G+F+S ++S PLL+ ++II+        +T+  L  L ++ K A   
Sbjct: 88  WRSFSKFQYFDSKGMFISLVYSVPLLLNTVIIVAVWVWRTFSTMTELKILQLKRKAAREN 147

[Close]

BLAST of MC01g_new0243 vs. NCBI nr
Match: XP_022156188.1 (transmembrane protein 18 [Momordica charantia])

HSP 1 Score: 320 bits (820), Expect = 4.04e-110
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIGWKEPWLMGLLGFHAL 60
           MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIGWKEPWLMGLLGFHAL
Sbjct: 1   MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIGWKEPWLMGLLGFHAL 60

Query: 61  LLIITIVTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW 120
           LLIITIVTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW
Sbjct: 61  LLIITIVTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW 120

Query: 121 SGPLLVISMIILINTLLTLCFLVVRWKRAELQHRARLSQSKED 163
           SGPLLVISMIILINTLLTLCFLVVRWKRAELQHRARLSQSKED
Sbjct: 121 SGPLLVISMIILINTLLTLCFLVVRWKRAELQHRARLSQSKED 163

[Close]

BLAST of MC01g_new0243 vs. NCBI nr
Match: XP_038900756.1 (transmembrane protein 18 [Benincasa hispida])

HSP 1 Score: 304 bits (778), Expect = 1.03e-103
Identity = 153/163 (93.87%), Postives = 157/163 (96.32%), Query Frame = 0


Query: 1   MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIGWKEPWLMGLLGFHAL 60
           MEELRSAMEEHMDQMADLI K+SSELRSG+RPAVDNF+GFFHAI WKEPWLMGLLGFH L
Sbjct: 1   MEELRSAMEEHMDQMADLIQKISSELRSGIRPAVDNFVGFFHAIDWKEPWLMGLLGFHGL 60

Query: 61  LLIITIVTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW 120
           LLIITI TRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLS LW
Sbjct: 61  LLIITIFTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSALW 120

Query: 121 SGPLLVISMIILINTLLTLCFLVVRWKRAELQHRARLSQSKED 163
           SGPLLVISMIILINTL TLCFLVVRWKRAEL+HRARLSQSKED
Sbjct: 121 SGPLLVISMIILINTLFTLCFLVVRWKRAELRHRARLSQSKED 163

[Close]

BLAST of MC01g_new0243 vs. NCBI nr
Match: XP_022949841.1 (transmembrane protein 18 [Cucurbita moschata] >XP_022978303.1 transmembrane protein 18 [Cucurbita maxima] >KAG6603481.1 Transmembrane protein 18, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 300 bits (769), Expect = 2.42e-102
Identity = 152/163 (93.25%), Postives = 157/163 (96.32%), Query Frame = 0


Query: 1   MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIGWKEPWLMGLLGFHAL 60
           MEELRSAMEEHMDQMADL+ KLSSELRSGLRPAVDNFIGFFHAI WKEPWLMGLLGFH L
Sbjct: 1   MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGL 60

Query: 61  LLIITIVTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW 120
           LLIITI TRK TNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW
Sbjct: 61  LLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW 120

Query: 121 SGPLLVISMIILINTLLTLCFLVVRWKRAELQHRARLSQSKED 163
           SGPLLVISMIILINTL TLC+LVVRWKRAEL++RARLSQ+KED
Sbjct: 121 SGPLLVISMIILINTLFTLCYLVVRWKRAELRNRARLSQTKED 163

[Close]

BLAST of MC01g_new0243 vs. NCBI nr
Match: XP_023543279.1 (transmembrane protein 18 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 299 bits (765), Expect = 9.86e-102
Identity = 151/163 (92.64%), Postives = 157/163 (96.32%), Query Frame = 0


Query: 1   MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIGWKEPWLMGLLGFHAL 60
           MEELRSAMEEHMDQMADL+ KLSSELRSGLRPAVDNFIGFFHAI WKEPWL+GLLGFH L
Sbjct: 1   MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLIGLLGFHGL 60

Query: 61  LLIITIVTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW 120
           LLIITI TRK TNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW
Sbjct: 61  LLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW 120

Query: 121 SGPLLVISMIILINTLLTLCFLVVRWKRAELQHRARLSQSKED 163
           SGPLL+ISMIILINTL TLC+LVVRWKRAEL++RARLSQSKED
Sbjct: 121 SGPLLLISMIILINTLFTLCYLVVRWKRAELRNRARLSQSKED 163

[Close]

BLAST of MC01g_new0243 vs. NCBI nr
Match: XP_011650049.1 (transmembrane protein 18 [Cucumis sativus] >KGN63345.1 hypothetical protein Csa_021882 [Cucumis sativus])

HSP 1 Score: 294 bits (752), Expect = 9.46e-100
Identity = 149/163 (91.41%), Postives = 154/163 (94.48%), Query Frame = 0


Query: 1   MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIGWKEPWLMGLLGFHAL 60
           M+ELRS MEEHMDQM+DLI KLSSELRSGLRPA+DNFIGFFHAI WKEPWLMGLLGFH L
Sbjct: 1   MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60

Query: 61  LLIITIVTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW 120
           LLIITI TRKRTNFQMFLFLLALAGVYFAE IN ILSKNWKNFATQNYFDPNGVFLS LW
Sbjct: 61  LLIITIFTRKRTNFQMFLFLLALAGVYFAEIINGILSKNWKNFATQNYFDPNGVFLSALW 120

Query: 121 SGPLLVISMIILINTLLTLCFLVVRWKRAELQHRARLSQSKED 163
           SGPLLVISMIILINTL TLC+LVVRWKRAEL+HRARLSQSKED
Sbjct: 121 SGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 163

[Close]

BLAST of MC01g_new0243 vs. ExPASy TrEMBL
Match: A0A6J1DPY2 (Transmembrane protein 18 OS=Momordica charantia OX=3673 GN=LOC111023137 PE=3 SV=1)

HSP 1 Score: 320 bits (820), Expect = 1.96e-110
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIGWKEPWLMGLLGFHAL 60
           MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIGWKEPWLMGLLGFHAL
Sbjct: 1   MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIGWKEPWLMGLLGFHAL 60

Query: 61  LLIITIVTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW 120
           LLIITIVTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW
Sbjct: 61  LLIITIVTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW 120

Query: 121 SGPLLVISMIILINTLLTLCFLVVRWKRAELQHRARLSQSKED 163
           SGPLLVISMIILINTLLTLCFLVVRWKRAELQHRARLSQSKED
Sbjct: 121 SGPLLVISMIILINTLLTLCFLVVRWKRAELQHRARLSQSKED 163

[Close]

BLAST of MC01g_new0243 vs. ExPASy TrEMBL
Match: A0A6J1ISM9 (Transmembrane protein 18 OS=Cucurbita maxima OX=3661 GN=LOC111478331 PE=3 SV=1)

HSP 1 Score: 300 bits (769), Expect = 1.17e-102
Identity = 152/163 (93.25%), Postives = 157/163 (96.32%), Query Frame = 0


Query: 1   MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIGWKEPWLMGLLGFHAL 60
           MEELRSAMEEHMDQMADL+ KLSSELRSGLRPAVDNFIGFFHAI WKEPWLMGLLGFH L
Sbjct: 1   MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGL 60

Query: 61  LLIITIVTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW 120
           LLIITI TRK TNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW
Sbjct: 61  LLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW 120

Query: 121 SGPLLVISMIILINTLLTLCFLVVRWKRAELQHRARLSQSKED 163
           SGPLLVISMIILINTL TLC+LVVRWKRAEL++RARLSQ+KED
Sbjct: 121 SGPLLVISMIILINTLFTLCYLVVRWKRAELRNRARLSQTKED 163

[Close]

BLAST of MC01g_new0243 vs. ExPASy TrEMBL
Match: A0A6J1GD63 (Transmembrane protein 18 OS=Cucurbita moschata OX=3662 GN=LOC111453119 PE=3 SV=1)

HSP 1 Score: 300 bits (769), Expect = 1.17e-102
Identity = 152/163 (93.25%), Postives = 157/163 (96.32%), Query Frame = 0


Query: 1   MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIGWKEPWLMGLLGFHAL 60
           MEELRSAMEEHMDQMADL+ KLSSELRSGLRPAVDNFIGFFHAI WKEPWLMGLLGFH L
Sbjct: 1   MEELRSAMEEHMDQMADLVQKLSSELRSGLRPAVDNFIGFFHAIDWKEPWLMGLLGFHGL 60

Query: 61  LLIITIVTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW 120
           LLIITI TRK TNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW
Sbjct: 61  LLIITIFTRKHTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW 120

Query: 121 SGPLLVISMIILINTLLTLCFLVVRWKRAELQHRARLSQSKED 163
           SGPLLVISMIILINTL TLC+LVVRWKRAEL++RARLSQ+KED
Sbjct: 121 SGPLLVISMIILINTLFTLCYLVVRWKRAELRNRARLSQTKED 163

[Close]

BLAST of MC01g_new0243 vs. ExPASy TrEMBL
Match: A0A0A0LN62 (Transmembrane protein 18 OS=Cucumis sativus OX=3659 GN=Csa_2G431140 PE=3 SV=1)

HSP 1 Score: 294 bits (752), Expect = 4.58e-100
Identity = 149/163 (91.41%), Postives = 154/163 (94.48%), Query Frame = 0


Query: 1   MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIGWKEPWLMGLLGFHAL 60
           M+ELRS MEEHMDQM+DLI KLSSELRSGLRPA+DNFIGFFHAI WKEPWLMGLLGFH L
Sbjct: 1   MDELRSVMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60

Query: 61  LLIITIVTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW 120
           LLIITI TRKRTNFQMFLFLLALAGVYFAE IN ILSKNWKNFATQNYFDPNGVFLS LW
Sbjct: 61  LLIITIFTRKRTNFQMFLFLLALAGVYFAEIINGILSKNWKNFATQNYFDPNGVFLSALW 120

Query: 121 SGPLLVISMIILINTLLTLCFLVVRWKRAELQHRARLSQSKED 163
           SGPLLVISMIILINTL TLC+LVVRWKRAEL+HRARLSQSKED
Sbjct: 121 SGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 163

[Close]

BLAST of MC01g_new0243 vs. ExPASy TrEMBL
Match: A0A5A7VF36 (Transmembrane protein 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G001270 PE=3 SV=1)

HSP 1 Score: 291 bits (746), Expect = 3.76e-99
Identity = 147/163 (90.18%), Postives = 153/163 (93.87%), Query Frame = 0


Query: 1   MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIGWKEPWLMGLLGFHAL 60
           M+ELRSAMEEHMDQM+DLI KLSSELRSGLRPA+DNFIGFFHAI WKEPWLMGLLGFH L
Sbjct: 1   MDELRSAMEEHMDQMSDLIQKLSSELRSGLRPALDNFIGFFHAIDWKEPWLMGLLGFHGL 60

Query: 61  LLIITIVTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW 120
           LLIITI TRKRTNFQMFLFL ALAGVYFAE IN+ILSKNWK FATQNYFDPNGVFLS LW
Sbjct: 61  LLIITIFTRKRTNFQMFLFLFALAGVYFAEGINKILSKNWKKFATQNYFDPNGVFLSALW 120

Query: 121 SGPLLVISMIILINTLLTLCFLVVRWKRAELQHRARLSQSKED 163
            GPLLVISMIILINTL TLC+LVVRWKRAEL+HRARLSQSKED
Sbjct: 121 CGPLLVISMIILINTLFTLCYLVVRWKRAELRHRARLSQSKED 163

[Close]

BLAST of MC01g_new0243 vs. TAIR 10
Match: AT1G34350.1 (unknown protein; Has 192 Blast hits to 192 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). )

HSP 1 Score: 252.3 bits (643), Expect = 2.7e-67
Identity = 118/163 (72.39%), Postives = 146/163 (89.57%), Query Frame = 0


Query: 1   MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIGWKEPWLMGLLGFHAL 60
           MEE+RSAME+ +D +ADL+ KLS ELR+G +PA DNF+GFFHAI WKEPW+MGL+ FHAL
Sbjct: 1   MEEIRSAMEKQVDLVADLVEKLSGELRTGFQPAYDNFLGFFHAIDWKEPWIMGLMAFHAL 60

Query: 61  LLIITIVTRKRTNFQMFLFLLALAGVYFAERINRILSKNWKNFATQNYFDPNGVFLSTLW 120
           LL++T+++R+  NF MFLFLLALAGVYFAE +NR L KNWK+F+TQNYFD NGVFLSTLW
Sbjct: 61  LLLVTLLSRRHLNFHMFLFLLALAGVYFAENLNRELRKNWKSFSTQNYFDSNGVFLSTLW 120

Query: 121 SGPLLVISMIILINTLLTLCFLVVRWKRAELQHRARLSQSKED 164
           SGPLLVI+MIILINTL +LC+L+V+WKRAEL+HRARL+ +KE+
Sbjct: 121 SGPLLVIAMIILINTLFSLCYLIVKWKRAELRHRARLAHTKEE 163

[Close]

BLAST of MC01g_new0243 vs. TAIR 10
Match: AT1G34350.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages. )

HSP 1 Score: 237.3 bits (604), Expect = 8.9e-63
Identity = 117/188 (62.23%), Postives = 146/188 (77.66%), Query Frame = 0


Query: 1   MEELRSAMEEHMDQMADLIHKLSSELRSGLRPAVDNFIGFFHAIGWKEPWLMGLLGFHAL 60
           MEE+RSAME+ +D +ADL+ KLS ELR+G +PA DNF+GFFHAI WKEPW+MGL+ FHAL
Sbjct: 1   MEEIRSAMEKQVDLVADLVEKLSGELRTGFQPAYDNFLGFFHAIDWKEPWIMGLMAFHAL 60

Query: 61  LLIITIVTRKRTNFQMFLFLLA-------------------------LAGVYFAERINRI 120
           LL++T+++R+  NF MFLFLLA                         +AGVYFAE +NR 
Sbjct: 61  LLLVTLLSRRHLNFHMFLFLLACKFPLKLSIYILYKKSLRSNDLTSLVAGVYFAENLNRE 120

Query: 121 LSKNWKNFATQNYFDPNGVFLSTLWSGPLLVISMIILINTLLTLCFLVVRWKRAELQHRA 164
           L KNWK+F+TQNYFD NGVFLSTLWSGPLLVI+MIILINTL +LC+L+V+WKRAEL+HRA
Sbjct: 121 LRKNWKSFSTQNYFDSNGVFLSTLWSGPLLVIAMIILINTLFSLCYLIVKWKRAELRHRA 180

The following BLAST results are available for this feature:

BLAST of MC01g_new0243 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DGF8	8.8e-15	37.29	Transmembrane protein 18 OS=Rattus norvegicus OX=10116 GN=Tmem18 PE=2 SV=1	[more]
Q3SZ36	1.1e-14	35.90	Transmembrane protein 18 OS=Bos taurus OX=9913 GN=TMEM18 PE=2 SV=1	[more]
Q96B42	1.1e-14	37.29	Transmembrane protein 18 OS=Homo sapiens OX=9606 GN=TMEM18 PE=1 SV=2	[more]
Q3TUD9	2.0e-14	36.44	Transmembrane protein 18 OS=Mus musculus OX=10090 GN=Tmem18 PE=2 SV=1	[more]
Q641M3	2.6e-14	36.07	Transmembrane protein 18 OS=Danio rerio OX=7955 GN=tmem18 PE=2 SV=1	[more]

BLAST of MC01g_new0243 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156188.1	4.04e-110	100.00	transmembrane protein 18 [Momordica charantia]	[more]
XP_038900756.1	1.03e-103	93.87	transmembrane protein 18 [Benincasa hispida]	[more]
XP_022949841.1	2.42e-102	93.25	transmembrane protein 18 [Cucurbita moschata] >XP_022978303.1 transmembrane prot...	[more]
XP_023543279.1	9.86e-102	92.64	transmembrane protein 18 [Cucurbita pepo subsp. pepo]	[more]
XP_011650049.1	9.46e-100	91.41	transmembrane protein 18 [Cucumis sativus] >KGN63345.1 hypothetical protein Csa_...	[more]

BLAST of MC01g_new0243 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DPY2	1.96e-110	100.00	Transmembrane protein 18 OS=Momordica charantia OX=3673 GN=LOC111023137 PE=3 SV=...	[more]
A0A6J1ISM9	1.17e-102	93.25	Transmembrane protein 18 OS=Cucurbita maxima OX=3661 GN=LOC111478331 PE=3 SV=1	[more]
A0A6J1GD63	1.17e-102	93.25	Transmembrane protein 18 OS=Cucurbita moschata OX=3662 GN=LOC111453119 PE=3 SV=1	[more]
A0A0A0LN62	4.58e-100	91.41	Transmembrane protein 18 OS=Cucumis sativus OX=3659 GN=Csa_2G431140 PE=3 SV=1	[more]
A0A5A7VF36	3.76e-99	90.18	Transmembrane protein 18 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of MC01g_new0243 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G34350.1	2.7e-67	72.39	unknown protein; Has 192 Blast hits to 192 proteins in 79 species: Archae - 0; B...	[more]
AT1G34350.2	8.9e-63	62.23	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..21
None	No IPR available	PANTHER	PTHR22593:SF2	TRANSMEMBRANE PROTEIN 18	coord: 1..161
None	No IPR available	PANTHER	PTHR22593	TRANSMEMBRANE PROTEIN 18	coord: 1..161
IPR026721	Transmembrane protein 18	PFAM	PF14770	TMEM18	coord: 40..156 e-value: 1.4E-44 score: 150.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g_new0243.1	MC01g_new0243.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0052543	callose deposition in cell wall
biological_process	GO:0009846	pollen germination
biological_process	GO:0009860	pollen tube growth
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005640	nuclear outer membrane