Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTCGTTTGGTTCCAAAGTATTTTGGGGAGCCACTGTCTTAATTTTCCTAGGCTTTCATTTTTCCGCCGCTCAAACGACTGGAAAAATTGTTCGACCAGGAGAGAAGGAATGGCGGTTTGATTTTGGCATGCATCCGAAAGGTGTACTGATTCCTCCATCTGGACCAAGTCAGAGGAGATCAGACTATTCTCCTCCTCCACCGTCAGATTGGAGGTTAGATTTTGAAATGTATCTGAAAGATGTACCAGTTCTTTCATCTGAACCGAGTAGTAGATCGAATTCTCCTCCACCGTCAGATCGGAGGTTGAATTTTGGAATGTATCCAAAAGATGTACTAGTTCCTTCATCTGGACCAAGTAGTAGATCAAATTCTCCTCCACTGTCAAATCGGAGGTCGAATTTTGGAATGTATCCGAAAGATGTACCAGTTCCTTCATCTGGACCGAGTAGTAGATCGAATTCTCCTCCACCTTCCGAACAGAGGTTGAATTTTGGAATGTATCCAAAAGATGTACCGGTTCCTTCATCTGGACCAAGTAGTAGATCAAATTCTCCTCCACCGTCTTCTATGTCCACTAATCTAGAAAAGCGGTGGTTGAAGTTTGGAAAGTATCCAAAAGACGTACCAATTCCTCTATCTTGA
mRNA sequence
ATGGTGTCGTTTGGTTCCAAAGTATTTTGGGGAGCCACTGTCTTAATTTTCCTAGGCTTTCATTTTTCCGCCGCTCAAACGACTGGAAAAATTGTTCGACCAGGAGAGAAGGAATGGCGGTTTGATTTTGGCATGCATCCGAAAGGTGTACTGATTCCTCCATCTGGACCAAGTCAGAGGAGATCAGACTATTCTCCTCCTCCACCGTCAGATTGGAGGTTAGATTTTGAAATGTATCTGAAAGATGTACCAGTTCTTTCATCTGAACCGAGTAGTAGATCGAATTCTCCTCCACCGTCAGATCGGAGGTTGAATTTTGGAATGTATCCAAAAGATGTACTAGTTCCTTCATCTGGACCAAGTAGTAGATCAAATTCTCCTCCACTGTCAAATCGGAGGTCGAATTTTGGAATGTATCCGAAAGATGTACCAGTTCCTTCATCTGGACCGAGTAGTAGATCGAATTCTCCTCCACCTTCCGAACAGAGGTTGAATTTTGGAATGTATCCAAAAGATGTACCGGTTCCTTCATCTGGACCAAGTAGTAGATCAAATTCTCCTCCACCGTCTTCTATGTCCACTAATCTAGAAAAGCGGTGGTTGAAGTTTGGAAAGTATCCAAAAGACGTACCAATTCCTCTATCTTGA
Coding sequence (CDS)
ATGGTGTCGTTTGGTTCCAAAGTATTTTGGGGAGCCACTGTCTTAATTTTCCTAGGCTTTCATTTTTCCGCCGCTCAAACGACTGGAAAAATTGTTCGACCAGGAGAGAAGGAATGGCGGTTTGATTTTGGCATGCATCCGAAAGGTGTACTGATTCCTCCATCTGGACCAAGTCAGAGGAGATCAGACTATTCTCCTCCTCCACCGTCAGATTGGAGGTTAGATTTTGAAATGTATCTGAAAGATGTACCAGTTCTTTCATCTGAACCGAGTAGTAGATCGAATTCTCCTCCACCGTCAGATCGGAGGTTGAATTTTGGAATGTATCCAAAAGATGTACTAGTTCCTTCATCTGGACCAAGTAGTAGATCAAATTCTCCTCCACTGTCAAATCGGAGGTCGAATTTTGGAATGTATCCGAAAGATGTACCAGTTCCTTCATCTGGACCGAGTAGTAGATCGAATTCTCCTCCACCTTCCGAACAGAGGTTGAATTTTGGAATGTATCCAAAAGATGTACCGGTTCCTTCATCTGGACCAAGTAGTAGATCAAATTCTCCTCCACCGTCTTCTATGTCCACTAATCTAGAAAAGCGGTGGTTGAAGTTTGGAAAGTATCCAAAAGACGTACCAATTCCTCTATCTTGA
Protein sequence
MVSFGSKVFWGATVLIFLGFHFSAAQTTGKIVRPGEKEWRFDFGMHPKGVLIPPSGPSQRRSDYSPPPPSDWRLDFEMYLKDVPVLSSEPSSRSNSPPPSDRRLNFGMYPKDVLVPSSGPSSRSNSPPLSNRRSNFGMYPKDVPVPSSGPSSRSNSPPPSEQRLNFGMYPKDVPVPSSGPSSRSNSPPPSSMSTNLEKRWLKFGKYPKDVPIPLS
Homology
BLAST of MC01g_new0238 vs. NCBI nr
Match:
KAG6603169.1 (hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 154 bits (388), Expect = 2.67e-41
Identity = 102/223 (45.74%), Postives = 127/223 (56.95%), Query Frame = 0
Query: 36 EKEWRFDFGMHPKGVLIPPSGPSQRRSDYSPPPP--------SDWRLDFEMYLKDVPVLS 95
K+ + +FGM PKGV IPPSGPSQR SDY PPPP +++F M K VP+
Sbjct: 115 SKQSKINFGMLPKGVPIPPSGPSQRTSDYPPPPPRASSVILNKQSKINFGMLPKGVPIPP 174
Query: 96 SEPSSR-SNSPPP-----------SDRRLNFGMYPKDVLVPSSGPSSR-SNSPP------ 155
S PS R SN PPP + ++NFGM PK V +P SGPS R S+ PP
Sbjct: 175 SGPSQRTSNYPPPPPLHASSVILNTQSKINFGMLPKGVPIPPSGPSQRTSDYPPPPPHAS 234
Query: 156 --LSNRRS--NFGMYPKDVPVPSSGPSSR-SNSPPP----------SEQRLNFGMYPKDV 215
+ N +S NFGM PK VP+P SGPS R S+ PPP ++ ++NFGM PK V
Sbjct: 235 SFILNTQSKINFGMLPKGVPIPPSGPSQRTSDYPPPPPHASSVILNTQSKINFGMLPKGV 294
BLAST of MC01g_new0238 vs. NCBI nr
Match:
XP_021800922.1 (formin-like protein 5 [Prunus avium])
HSP 1 Score: 138 bits (348), Expect = 1.68e-35
Identity = 91/229 (39.74%), Postives = 114/229 (49.78%), Query Frame = 0
Query: 7 KVFWGATVLIFL-GFHFSAAQTTGKIVRPGEKEWR-------------------FDFGMH 66
K+ W A+VL+ L GF ++Q G+ W+ F+FG
Sbjct: 7 KILWVASVLVLLLGFASCSSQGGGEFTHRSLNFWKAARARVPPTGPPNTGTSRKFNFGTL 66
Query: 67 PKGVLIPPSGPSQRRSDYSPPPPSDWRLDFEMYLKDVPVLSSEPSSRSNSPPPSDRRLNF 126
PKG LIPPS PS+R S PPPP +F K P+ S PS R++ PPP NF
Sbjct: 67 PKGTLIPPSWPSKRTS--RPPPPPPHPSNFGTLPKYTPIPPSGPSGRTSDPPPPP--FNF 126
Query: 127 GMYPKDVLVPSSGPSSRSNSPPLSNRRSNFGMYPKDVPVPSSGPSSRSNSPPPSEQRLNF 186
G PK +P SGPS R++ PP NFG PK P+P SGPS R++ PPP NF
Sbjct: 127 GTLPKYTPIPPSGPSGRTSDPPPPPF--NFGTLPKYTPIPPSGPSGRTSDPPPPP--FNF 186
Query: 187 GMYPKDVPVPSSGPSSRSNSPPPSSMSTNLEKRWLKFGKYPKDVPIPLS 215
G PK P+P SGPS R++ PPP + FG PK PIP S
Sbjct: 187 GTLPKYTPIPPSGPSGRTSDPPPPPFN---------FGTLPKYTPIPPS 218
BLAST of MC01g_new0238 vs. NCBI nr
Match:
CAB4314850.1 (unnamed protein product [Prunus armeniaca])
HSP 1 Score: 134 bits (338), Expect = 8.39e-35
Identity = 81/175 (46.29%), Postives = 96/175 (54.86%), Query Frame = 0
Query: 40 RFDFGMHPKGVLIPPSGPSQRRSDYSPPPPSDWRLDFEMYLKDVPVLSSEPSSRSNSPPP 99
+F+FG PKG LIPPS PS+R S PPPP + +F K P+ S PS R++ PPP
Sbjct: 59 KFNFGTLPKGTLIPPSWPSKRTSRPPPPPPQPF--NFGTLPKYTPIPPSGPSGRTSDPPP 118
Query: 100 SDRRLNFGMYPKDVLVPSSGPSSR-SNSPPLSNRRSNFGMYPKDVPVPSSGPSSR-SNSP 159
NFG PK +P SGPS R S+ PP NFG PK P+P SGPS R S+ P
Sbjct: 119 PPPPFNFGTLPKYTPIPPSGPSGRTSDPPPPPPPPFNFGTLPKYTPIPPSGPSGRTSDPP 178
Query: 160 PPSEQRLNFGMYPKDVPVPSSGPSSRSNSPPPSSMSTNLEKRWLKFGKYPKDVPI 212
PP NFG PK P+P SGPS R++ PPP N FG PK PI
Sbjct: 179 PPPPPPFNFGTLPKYTPIPPSGPSGRTSDPPPPPPPFN-------FGTLPKYTPI 224
BLAST of MC01g_new0238 vs. NCBI nr
Match:
XP_021800387.1 (formin-like protein 5, partial [Prunus avium])
HSP 1 Score: 135 bits (339), Expect = 1.47e-34
Identity = 81/182 (44.51%), Postives = 99/182 (54.40%), Query Frame = 0
Query: 34 PGEKEWRFDFGMHPKGVLIPPSGPSQRRSDYSPPPPSDWRLDFEMYLKDVPVLSSEPSSR 93
P + +F+FG PKG LIPPS PS+R S PPPP +F K P+ S PS R
Sbjct: 13 PPDSTRKFNFGTLPKGTLIPPSWPSKRTS--RPPPPPPHPSNFGTLPKYTPIPPSGPSGR 72
Query: 94 SNSPPPSDRRLNFGMYPKDVLVPSSGPSSRSNSPPLSNRRSNFGMYPKDVPVPSSGPSSR 153
++ PPP NFG PK +P SGPS R++ PP NFG PK P+P SGPS R
Sbjct: 73 TSDPPPPP--FNFGTLPKYTPIPPSGPSGRTSDPPPPPF--NFGTLPKYTPIPPSGPSGR 132
Query: 154 SNSPPPSEQRLNFGMYPKDVPVPSSGPSSRSNSPPPSSMSTNLEKRWLKFGKYPKDVPIP 213
++ PPP NFG PK P+P SGPS R++ PPP + FG PK PIP
Sbjct: 133 TSDPPPPP--FNFGTLPKYTPIPPSGPSGRTSDPPPPPFN---------FGTLPKYTPIP 177
Query: 214 LS 215
S
Sbjct: 193 PS 177
BLAST of MC01g_new0238 vs. NCBI nr
Match:
XP_022967687.1 (actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima])
HSP 1 Score: 137 bits (346), Expect = 4.69e-34
Identity = 90/213 (42.25%), Postives = 116/213 (54.46%), Query Frame = 0
Query: 36 EKEWRFDFGMHPKGVLIPPSGPSQRRSDYSPPPP--------SDWRLDFEMYLKDVPVLS 95
K + + GM P+GV IPPSGPSQR SDY PPPP +++F M K VP+
Sbjct: 275 NKHSKINLGMLPRGVPIPPSGPSQRTSDYPPPPPHASSVILNKQSKINFGMLPKGVPIPP 334
Query: 96 SEPSSRSNS-PPPSDR----------RLNFGMYPKDVLVPSSGPSSRSNSPP-------- 155
S PS R++ PPP R ++ GM P+ V +P G S R++ P
Sbjct: 335 SGPSQRTSXYPPPPPRASSVILNKQSKIYLGMLPRGVPIPPPGLSQRTSDYPHPPPHASS 394
Query: 156 -LSNRRS--NFGMYPKDVPVPSSGPSSR-SNSPPPSEQ----RLNFGMYPKDVPVPSSGP 213
+ N++S NFGM PK VP+P SGPS R S+ PPP ++NFGM PKDVP+P SGP
Sbjct: 395 VILNKQSKINFGMLPKGVPIPPSGPSHRTSDYPPPPPHVLWPKINFGMLPKDVPIPPSGP 454
BLAST of MC01g_new0238 vs. ExPASy TrEMBL
Match:
A0A6P5RDM4 (formin-like protein 5 OS=Prunus avium OX=42229 GN=LOC110745147 PE=4 SV=1)
HSP 1 Score: 138 bits (348), Expect = 8.11e-36
Identity = 91/229 (39.74%), Postives = 114/229 (49.78%), Query Frame = 0
Query: 7 KVFWGATVLIFL-GFHFSAAQTTGKIVRPGEKEWR-------------------FDFGMH 66
K+ W A+VL+ L GF ++Q G+ W+ F+FG
Sbjct: 7 KILWVASVLVLLLGFASCSSQGGGEFTHRSLNFWKAARARVPPTGPPNTGTSRKFNFGTL 66
Query: 67 PKGVLIPPSGPSQRRSDYSPPPPSDWRLDFEMYLKDVPVLSSEPSSRSNSPPPSDRRLNF 126
PKG LIPPS PS+R S PPPP +F K P+ S PS R++ PPP NF
Sbjct: 67 PKGTLIPPSWPSKRTS--RPPPPPPHPSNFGTLPKYTPIPPSGPSGRTSDPPPPP--FNF 126
Query: 127 GMYPKDVLVPSSGPSSRSNSPPLSNRRSNFGMYPKDVPVPSSGPSSRSNSPPPSEQRLNF 186
G PK +P SGPS R++ PP NFG PK P+P SGPS R++ PPP NF
Sbjct: 127 GTLPKYTPIPPSGPSGRTSDPPPPPF--NFGTLPKYTPIPPSGPSGRTSDPPPPP--FNF 186
Query: 187 GMYPKDVPVPSSGPSSRSNSPPPSSMSTNLEKRWLKFGKYPKDVPIPLS 215
G PK P+P SGPS R++ PPP + FG PK PIP S
Sbjct: 187 GTLPKYTPIPPSGPSGRTSDPPPPPFN---------FGTLPKYTPIPPS 218
BLAST of MC01g_new0238 vs. ExPASy TrEMBL
Match:
A0A6J5XM21 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS39378 PE=4 SV=1)
HSP 1 Score: 134 bits (338), Expect = 4.06e-35
Identity = 81/175 (46.29%), Postives = 96/175 (54.86%), Query Frame = 0
Query: 40 RFDFGMHPKGVLIPPSGPSQRRSDYSPPPPSDWRLDFEMYLKDVPVLSSEPSSRSNSPPP 99
+F+FG PKG LIPPS PS+R S PPPP + +F K P+ S PS R++ PPP
Sbjct: 59 KFNFGTLPKGTLIPPSWPSKRTSRPPPPPPQPF--NFGTLPKYTPIPPSGPSGRTSDPPP 118
Query: 100 SDRRLNFGMYPKDVLVPSSGPSSR-SNSPPLSNRRSNFGMYPKDVPVPSSGPSSR-SNSP 159
NFG PK +P SGPS R S+ PP NFG PK P+P SGPS R S+ P
Sbjct: 119 PPPPFNFGTLPKYTPIPPSGPSGRTSDPPPPPPPPFNFGTLPKYTPIPPSGPSGRTSDPP 178
Query: 160 PPSEQRLNFGMYPKDVPVPSSGPSSRSNSPPPSSMSTNLEKRWLKFGKYPKDVPI 212
PP NFG PK P+P SGPS R++ PPP N FG PK PI
Sbjct: 179 PPPPPPFNFGTLPKYTPIPPSGPSGRTSDPPPPPPPFN-------FGTLPKYTPI 224
BLAST of MC01g_new0238 vs. ExPASy TrEMBL
Match:
A0A6P5RC98 (formin-like protein 5 OS=Prunus avium OX=42229 GN=LOC110744709 PE=4 SV=1)
HSP 1 Score: 135 bits (339), Expect = 7.10e-35
Identity = 81/182 (44.51%), Postives = 99/182 (54.40%), Query Frame = 0
Query: 34 PGEKEWRFDFGMHPKGVLIPPSGPSQRRSDYSPPPPSDWRLDFEMYLKDVPVLSSEPSSR 93
P + +F+FG PKG LIPPS PS+R S PPPP +F K P+ S PS R
Sbjct: 13 PPDSTRKFNFGTLPKGTLIPPSWPSKRTS--RPPPPPPHPSNFGTLPKYTPIPPSGPSGR 72
Query: 94 SNSPPPSDRRLNFGMYPKDVLVPSSGPSSRSNSPPLSNRRSNFGMYPKDVPVPSSGPSSR 153
++ PPP NFG PK +P SGPS R++ PP NFG PK P+P SGPS R
Sbjct: 73 TSDPPPPP--FNFGTLPKYTPIPPSGPSGRTSDPPPPPF--NFGTLPKYTPIPPSGPSGR 132
Query: 154 SNSPPPSEQRLNFGMYPKDVPVPSSGPSSRSNSPPPSSMSTNLEKRWLKFGKYPKDVPIP 213
++ PPP NFG PK P+P SGPS R++ PPP + FG PK PIP
Sbjct: 133 TSDPPPPP--FNFGTLPKYTPIPPSGPSGRTSDPPPPPFN---------FGTLPKYTPIP 177
Query: 214 LS 215
S
Sbjct: 193 PS 177
BLAST of MC01g_new0238 vs. ExPASy TrEMBL
Match:
A0A6J1HRH7 (actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3661 GN=LOC111467141 PE=4 SV=1)
HSP 1 Score: 137 bits (346), Expect = 2.27e-34
Identity = 90/213 (42.25%), Postives = 116/213 (54.46%), Query Frame = 0
Query: 36 EKEWRFDFGMHPKGVLIPPSGPSQRRSDYSPPPP--------SDWRLDFEMYLKDVPVLS 95
K + + GM P+GV IPPSGPSQR SDY PPPP +++F M K VP+
Sbjct: 275 NKHSKINLGMLPRGVPIPPSGPSQRTSDYPPPPPHASSVILNKQSKINFGMLPKGVPIPP 334
Query: 96 SEPSSRSNS-PPPSDR----------RLNFGMYPKDVLVPSSGPSSRSNSPP-------- 155
S PS R++ PPP R ++ GM P+ V +P G S R++ P
Sbjct: 335 SGPSQRTSXYPPPPPRASSVILNKQSKIYLGMLPRGVPIPPPGLSQRTSDYPHPPPHASS 394
Query: 156 -LSNRRS--NFGMYPKDVPVPSSGPSSR-SNSPPPSEQ----RLNFGMYPKDVPVPSSGP 213
+ N++S NFGM PK VP+P SGPS R S+ PPP ++NFGM PKDVP+P SGP
Sbjct: 395 VILNKQSKINFGMLPKGVPIPPSGPSHRTSDYPPPPPHVLWPKINFGMLPKDVPIPPSGP 454
BLAST of MC01g_new0238 vs. ExPASy TrEMBL
Match:
A0A6J5V9I4 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS39963 PE=4 SV=1)
HSP 1 Score: 130 bits (328), Expect = 6.04e-34
Identity = 83/205 (40.49%), Postives = 106/205 (51.71%), Query Frame = 0
Query: 7 KVFWGATVLIFL-GFHFSAAQTTGKIVRPGEKEWR------------------FDFGMHP 66
K+ W A++L+ L GF ++Q G+ W+ F+FG P
Sbjct: 7 KISWVASLLVLLLGFASCSSQRGGEFTHRSLNFWKAASSRVPPTGPNTGTSRKFNFGTLP 66
Query: 67 KGVLIPPSGPSQRRSDYSPPPPSDWRLDFEMYLKDVPVLSSEPSSRSNSPPPSDRR--LN 126
KG LIPPS PS+R S PPPP + +F K P+ S PS R++ PPP N
Sbjct: 67 KGTLIPPSWPSKRTSRPPPPPPQPF--NFGTLPKYTPIPPSGPSGRTSDPPPPPPPPPFN 126
Query: 127 FGMYPKDVLVPSSGPSSR-SNSPPLSNRRSNFGMYPKDVPVPSSGPSSRSNSPPPSEQRL 186
FG PK +P SGPS R S+ PP NFG PK P+P SGPS R++ PPP
Sbjct: 127 FGTLPKYTPIPPSGPSGRTSDPPPPPPPPFNFGTLPKYTPIPPSGPSGRTSDPPPPPPPF 186
Query: 187 NFGMYPKDVPVPSSGPSSRSNSPPP 189
NFG PK P+ SGPS R++SPPP
Sbjct: 187 NFGTLPKYTPILPSGPSGRTSSPPP 209
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6603169.1 | 2.67e-41 | 45.74 | hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_021800922.1 | 1.68e-35 | 39.74 | formin-like protein 5 [Prunus avium] | [more] |
CAB4314850.1 | 8.39e-35 | 46.29 | unnamed protein product [Prunus armeniaca] | [more] |
XP_021800387.1 | 1.47e-34 | 44.51 | formin-like protein 5, partial [Prunus avium] | [more] |
XP_022967687.1 | 4.69e-34 | 42.25 | actin cytoskeleton-regulatory complex protein PAN1-like [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
A0A6P5RDM4 | 8.11e-36 | 39.74 | formin-like protein 5 OS=Prunus avium OX=42229 GN=LOC110745147 PE=4 SV=1 | [more] |
A0A6J5XM21 | 4.06e-35 | 46.29 | Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS39378 PE=... | [more] |
A0A6P5RC98 | 7.10e-35 | 44.51 | formin-like protein 5 OS=Prunus avium OX=42229 GN=LOC110744709 PE=4 SV=1 | [more] |
A0A6J1HRH7 | 2.27e-34 | 42.25 | actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3... | [more] |
A0A6J5V9I4 | 6.04e-34 | 40.49 | Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS39963 PE=4 S... | [more] |
Match Name | E-value | Identity | Description | |