MC01g_new0174 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g_new0174
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC01: 6302962 .. 6303336 (-)
RNA-Seq Expression	MC01g_new0174
Synteny	MC01g_new0174

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAAAAGTTTTATTCTTGGATTGAAGGGCTGGGTCCCTGCTGAAGACGCAATGGCTATAGAGCCATTGCAGGCTTGCTCGAATGAGCAAGCTCGAGCGTCGAGACCTCGTGCACAAGAATCAGGATCTATGGAGGAGCGATTAGATCGACTAGAGCGAAGACTCAACCACCAACATCAAGAGTGGAGGAGATTTATGTCGTATCAGGTGGAGTTCAACCGTAGCCTCGTTCGGATGTTTGCACAGTGTGGATTCAATCAAGGAGCAAATCCAATTCAATTCCCCAAACCACCCGAATTTTCAAACGATCCTCGACACGAAGAAGAGGGAGAAGATGAGGAAGAACTTGATTATTGGAGTCACAACATTTAG

mRNA sequence

ATGGACAAAAGTTTTATTCTTGGATTGAAGGGCTGGGTCCCTGCTGAAGACGCAATGGCTATAGAGCCATTGCAGGCTTGCTCGAATGAGCAAGCTCGAGCGTCGAGACCTCGTGCACAAGAATCAGGATCTATGGAGGAGCGATTAGATCGACTAGAGCGAAGACTCAACCACCAACATCAAGAGTGGAGGAGATTTATGTCGTATCAGGTGGAGTTCAACCGTAGCCTCGTTCGGATGTTTGCACAGTGTGGATTCAATCAAGGAGCAAATCCAATTCAATTCCCCAAACCACCCGAATTTTCAAACGATCCTCGACACGAAGAAGAGGGAGAAGATGAGGAAGAACTTGATTATTGGAGTCACAACATTTAG

Coding sequence (CDS)

ATGGACAAAAGTTTTATTCTTGGATTGAAGGGCTGGGTCCCTGCTGAAGACGCAATGGCTATAGAGCCATTGCAGGCTTGCTCGAATGAGCAAGCTCGAGCGTCGAGACCTCGTGCACAAGAATCAGGATCTATGGAGGAGCGATTAGATCGACTAGAGCGAAGACTCAACCACCAACATCAAGAGTGGAGGAGATTTATGTCGTATCAGGTGGAGTTCAACCGTAGCCTCGTTCGGATGTTTGCACAGTGTGGATTCAATCAAGGAGCAAATCCAATTCAATTCCCCAAACCACCCGAATTTTCAAACGATCCTCGACACGAAGAAGAGGGAGAAGATGAGGAAGAACTTGATTATTGGAGTCACAACATTTAG

Protein sequence

MDKSFILGLKGWVPAEDAMAIEPLQACSNEQARASRPRAQESGSMEERLDRLERRLNHQHQEWRRFMSYQVEFNRSLVRMFAQCGFNQGANPIQFPKPPEFSNDPRHEEEGEDEEELDYWSHNI

Homology

The following BLAST results are available for this feature:

BLAST of MC01g_new0174 vs.


Match Name	E-value	Identity	Description

BLAST of MC01g_new0174 vs.


Match Name	E-value	Identity	Description

BLAST of MC01g_new0174 vs.


Match Name	E-value	Identity	Description

BLAST of MC01g_new0174 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 42..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..48

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g_new0174.1	MC01g_new0174.1	mRNA