MC01g1682 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC01g1682
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionhistone-lysine N-methyltransferase SUVR3 isoform X1
LocationMC01: 20961014 .. 20961353 (+)
RNA-Seq ExpressionMC01g1682
SyntenyMC01g1682
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCAAAATTTGCTTCCAGAATTCAATCGACGACCACCCCCTATGCCTTCTTCATCTACGGTGTCCCCAATCACCATCCAGCCAACGATTGGGCTCAATTTCCAATCCCCAAGCAGGCCATGTCCAAAGGGAATCTGTGAGTTTGGTCGACGATTGGGGCCGCGATGTGTATCTGGATGTCGTTGTGAGATTGCAGGGAGTCTGAGTTTGAATGCCCTGTTCGAGTCTGAAAGGGTTAGGAAATGTTGCTAGCAATTGCGGACCGCGACGCTCCTGTGGGTTGGAGTTGTGAAAATCGGTCGACTCAGAGAGGAATTTCTGTTGGATTTAAGATTTTGAGA

mRNA sequence

CTCAAAATTTGCTTCCAGAATTCAATCGACGACCACCCCCTATGCCTTCTTCATCTACGGTGTCCCCAATCACCATCCAGCCAACGATTGGGCTCAATTTCCAATCCCCAAGCAGGCCATGTCCAAAGGGAATCTGTGAGTTTGGTCGACGATTGGGGCCGCGATGTGGGATGTCGTTGTGAGATTGCAGGGAGTCTGAGTTTGAATCCCTGTTCGAGTCTGAAAGGGTTAGGAAATGTTGCTAGCAATTGCGGACCGCGACGCTCCTGTGGGTTGTGTGAAAATCGGTCGACTCAGAGAGGAATTTCTGTTGGATTTAAGATTTTGAGA

Coding sequence (CDS)

CTCAAAATTTGCTTCCAGAATTCAATCGACGACCACCCCCTATGCCTTCTTCATCTACGGTGTCCCCAATCACCATCCAGCCAACGATTGGGCTCAATTTCCAATCCCCAAGCAGGCCATGTCCAAAGGGAATCTGTGAGTTTGGTCGACGATTGGGGCCGCGATGTGGGATGTCGTTGTGAGATTGCAGGGAGTCTGAGTTTGAATCCCTGTTCGAGTCTGAAAGGGTTAGGAAATGTTGCTAGCAATTGCGGACCGCGACGCTCCTGTGGGTTGTGTGAAAATCGGTCGACTCAGAGAGGAATTTCTGTTGGATTTAAGATTTTGAGA

Protein sequence

LKICFQNSIDDHPLCLLHLRCPQSPSSQRLGSISNPQAGHVQRESVSLVDDWGRDVGCRCEIAGSLSLNPCSSLKGLGNVASNCGPRRSCGLCENRSTQRGISVGFKILR
Homology
[Close]
BLAST of MC01g1682 vs. ExPASy Swiss-Prot
Match: Q9SRV2 (Histone-lysine N-methyltransferase SUVR3 OS=Arabidopsis thaliana OX=3702 GN=SUVR3 PE=2 SV=4)

HSP 1 Score: 48.1 bits (113), Expect = 7.3e-05
Identity = 42/127 (33.07%), Postives = 52/127 (40.94%), Query Frame = 0 

Query: 1   LKICFQNSIDDHPLCLLHLRCPQSPSS-------------QRLGSISNPQAGHVQ---RE 60
           + I F NSID            Q P+S                GS S P    V    R 
Sbjct: 76  ISIPFHNSIDSQRYAYFIYTPFQIPASSPPPPRQWWGAAANECGSESRPCFDSVSESGRF 135

Query: 61  SVSLVDDWGRDVGCRCEIAGSLSLNPCSSLKGLGNVASNCGPRRSCGL-CENRSTQRGIS 111
            VSLVD    + GC CE         C +  G+  +A+ CG    CG  C NR TQ+G+S
Sbjct: 136 GVSLVD----ESGCECERCEE-GYCKCLAFAGMEEIANECGSGCGCGSDCSNRVTQKGVS 195

[Close]
BLAST of MC01g1682 vs. NCBI nr
Match: KGN59651.2 (hypothetical protein Csa_002601 [Cucumis sativus])

HSP 1 Score: 95.9 bits (237), Expect = 3.17e-21
Identity = 62/119 (52.10%), Postives = 71/119 (59.66%), Query Frame = 0 

Query: 1   LKICFQNSIDDHPLCLLHLRCP------QSPSSQRLGSISNPQAGHVQRESVSLVDDWGR 60
           + I F NSIDD  L    +  P      Q    Q  GSIS+PQ+ H + ES++LVD+W  
Sbjct: 72  IPIPFHNSIDDR-LYAFFIYTPTVIISNQHFQRQCWGSISDPQSVHDESESINLVDNWVD 131

Query: 61  DV-GCRCEIAGSLSLN-PCSSLKGLGNVASNCGPRRSCGL-CENRSTQRGISVGFKILR 110
            V GC CE  G   L  PC S  GL +VAS CGPR SCGL CENR TQRGISV  KILR
Sbjct: 132 GVFGCDCENCGDFELQCPCLSFDGLEDVASECGPRCSCGLECENRLTQRGISVRLKILR 189

[Close]
BLAST of MC01g1682 vs. NCBI nr
Match: XP_011652203.1 (histone-lysine N-methyltransferase SUVR3 isoform X2 [Cucumis sativus])

HSP 1 Score: 95.9 bits (237), Expect = 6.64e-21
Identity = 62/119 (52.10%), Postives = 71/119 (59.66%), Query Frame = 0 

Query: 1   LKICFQNSIDDHPLCLLHLRCP------QSPSSQRLGSISNPQAGHVQRESVSLVDDWGR 60
           + I F NSIDD  L    +  P      Q    Q  GSIS+PQ+ H + ES++LVD+W  
Sbjct: 72  IPIPFHNSIDDR-LYAFFIYTPTVIISNQHFQRQCWGSISDPQSVHDESESINLVDNWVD 131

Query: 61  DV-GCRCEIAGSLSLN-PCSSLKGLGNVASNCGPRRSCGL-CENRSTQRGISVGFKILR 110
            V GC CE  G   L  PC S  GL +VAS CGPR SCGL CENR TQRGISV  KILR
Sbjct: 132 GVFGCDCENCGDFELQCPCLSFDGLEDVASECGPRCSCGLECENRLTQRGISVRLKILR 189

[Close]
BLAST of MC01g1682 vs. NCBI nr
Match: XP_004136662.1 (histone-lysine N-methyltransferase SUVR3 isoform X1 [Cucumis sativus])

HSP 1 Score: 95.9 bits (237), Expect = 6.97e-21
Identity = 62/119 (52.10%), Postives = 71/119 (59.66%), Query Frame = 0 

Query: 1   LKICFQNSIDDHPLCLLHLRCP------QSPSSQRLGSISNPQAGHVQRESVSLVDDWGR 60
           + I F NSIDD  L    +  P      Q    Q  GSIS+PQ+ H + ES++LVD+W  
Sbjct: 72  IPIPFHNSIDDR-LYAFFIYTPTVIISNQHFQRQCWGSISDPQSVHDESESINLVDNWVD 131

Query: 61  DV-GCRCEIAGSLSLN-PCSSLKGLGNVASNCGPRRSCGL-CENRSTQRGISVGFKILR 110
            V GC CE  G   L  PC S  GL +VAS CGPR SCGL CENR TQRGISV  KILR
Sbjct: 132 GVFGCDCENCGDFELQCPCLSFDGLEDVASECGPRCSCGLECENRLTQRGISVRLKILR 189

[Close]
BLAST of MC01g1682 vs. NCBI nr
Match: XP_038906247.1 (histone-lysine N-methyltransferase SUVR3 [Benincasa hispida])

HSP 1 Score: 95.9 bits (237), Expect = 7.23e-21
Identity = 63/119 (52.94%), Postives = 70/119 (58.82%), Query Frame = 0 

Query: 1   LKICFQNSIDDHPLCLLHLRCPQSPSS------QRLGSISNPQAGHVQRESVSLVDDWGR 60
           + I F N IDD P     L  P    S      Q  GSIS+ Q+ HV+ ES++LVDDW  
Sbjct: 75  IPIPFHNPIDDRPYAFF-LYTPTVIISNHHFERQCWGSISDFQSSHVESESMNLVDDWVS 134

Query: 61  DV-GCRCEIAGSLSLN-PCSSLKGLGNVASNCGPRRSCGL-CENRSTQRGISVGFKILR 110
            V GC CE  G       CSSL GL +VAS CGPR SCGL CENR TQRGISV  KILR
Sbjct: 135 GVFGCDCENCGDFEFQCSCSSLDGLVDVASECGPRCSCGLECENRLTQRGISVRLKILR 192

[Close]
BLAST of MC01g1682 vs. NCBI nr
Match: XP_022983826.1 (histone-lysine N-methyltransferase SUVR3 isoform X2 [Cucurbita maxima])

HSP 1 Score: 91.7 bits (226), Expect = 2.55e-19
Identity = 52/83 (62.65%), Postives = 57/83 (68.67%), Query Frame = 0 

Query: 31  GSISNPQAGHVQRESVSLVDDWGRDV-GCRCEIAGSLSLN-PCSSLKGLGNVASNCGPRR 90
           GSIS+ Q+ HV  ES+SLVDD G DV GC CE  G      PCSSL GL +VA+ CGPR 
Sbjct: 107 GSISDSQSSHVGSESMSLVDDLGGDVSGCDCENCGEYEFQCPCSSLDGLEDVATECGPRC 166

Query: 91  SCGL-CENRSTQRGISVGFKILR 110
           SCGL CENR TQRGI V  KI R
Sbjct: 167 SCGLECENRLTQRGICVRLKISR 189

[Close]
BLAST of MC01g1682 vs. ExPASy TrEMBL
Match: A0A0A0LF10 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G822400 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.38e-21
Identity = 62/119 (52.10%), Postives = 71/119 (59.66%), Query Frame = 0 

Query: 1   LKICFQNSIDDHPLCLLHLRCP------QSPSSQRLGSISNPQAGHVQRESVSLVDDWGR 60
           + I F NSIDD  L    +  P      Q    Q  GSIS+PQ+ H + ES++LVD+W  
Sbjct: 72  IPIPFHNSIDDR-LYAFFIYTPTVIISNQHFQRQCWGSISDPQSVHDESESINLVDNWVD 131

Query: 61  DV-GCRCEIAGSLSLN-PCSSLKGLGNVASNCGPRRSCGL-CENRSTQRGISVGFKILR 110
            V GC CE  G   L  PC S  GL +VAS CGPR SCGL CENR TQRGISV  KILR
Sbjct: 132 GVFGCDCENCGDFELQCPCLSFDGLEDVASECGPRCSCGLECENRLTQRGISVRLKILR 189

[Close]
BLAST of MC01g1682 vs. ExPASy TrEMBL
Match: A0A6J1J3G6 (histone-lysine N-methyltransferase SUVR3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482325 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.23e-19
Identity = 52/83 (62.65%), Postives = 57/83 (68.67%), Query Frame = 0 

Query: 31  GSISNPQAGHVQRESVSLVDDWGRDV-GCRCEIAGSLSLN-PCSSLKGLGNVASNCGPRR 90
           GSIS+ Q+ HV  ES+SLVDD G DV GC CE  G      PCSSL GL +VA+ CGPR 
Sbjct: 107 GSISDSQSSHVGSESMSLVDDLGGDVSGCDCENCGEYEFQCPCSSLDGLEDVATECGPRC 166

Query: 91  SCGL-CENRSTQRGISVGFKILR 110
           SCGL CENR TQRGI V  KI R
Sbjct: 167 SCGLECENRLTQRGICVRLKISR 189

[Close]
BLAST of MC01g1682 vs. ExPASy TrEMBL
Match: A0A6J1J706 (histone-lysine N-methyltransferase SUVR3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482325 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.29e-19
Identity = 52/83 (62.65%), Postives = 57/83 (68.67%), Query Frame = 0 

Query: 31  GSISNPQAGHVQRESVSLVDDWGRDV-GCRCEIAGSLSLN-PCSSLKGLGNVASNCGPRR 90
           GSIS+ Q+ HV  ES+SLVDD G DV GC CE  G      PCSSL GL +VA+ CGPR 
Sbjct: 107 GSISDSQSSHVGSESMSLVDDLGGDVSGCDCENCGEYEFQCPCSSLDGLEDVATECGPRC 166

Query: 91  SCGL-CENRSTQRGISVGFKILR 110
           SCGL CENR TQRGI V  KI R
Sbjct: 167 SCGLECENRLTQRGICVRLKISR 189

[Close]
BLAST of MC01g1682 vs. ExPASy TrEMBL
Match: A0A1S3B8F3 (histone-lysine N-methyltransferase SUVR3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486926 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.51e-19
Identity = 58/119 (48.74%), Postives = 69/119 (57.98%), Query Frame = 0 

Query: 1   LKICFQNSIDDHPLCLLHLRCPQSPSSQR------LGSISNPQAGHVQRESVSLVDDWGR 60
           + I F N IDD  L    +  P    S +       GSIS+ Q+GH + +S++LVD+W  
Sbjct: 77  IPIPFHNPIDDR-LYAFFIYTPTVIISNKHFQRQCWGSISDSQSGHDESDSINLVDNWVD 136

Query: 61  DV-GCRCEIAGSLSLN-PCSSLKGLGNVASNCGPRRSCGL-CENRSTQRGISVGFKILR 110
            V GC CE  G   L  PC S  GL +VAS CGPR SCG  CENR TQRGISV  KILR
Sbjct: 137 GVFGCDCENCGEFDLQCPCLSFDGLEDVASECGPRCSCGFECENRLTQRGISVRLKILR 194

[Close]
BLAST of MC01g1682 vs. ExPASy TrEMBL
Match: A0A5D3DQF9 (Histone-lysine N-methyltransferase SUVR3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007120 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.66e-19
Identity = 58/119 (48.74%), Postives = 69/119 (57.98%), Query Frame = 0 

Query: 1   LKICFQNSIDDHPLCLLHLRCPQSPSSQR------LGSISNPQAGHVQRESVSLVDDWGR 60
           + I F N IDD  L    +  P    S +       GSIS+ Q+GH + +S++LVD+W  
Sbjct: 77  IPIPFHNPIDDR-LYAFFIYTPTVIISNKHFQRQCWGSISDSQSGHDESDSINLVDNWVD 136

Query: 61  DV-GCRCEIAGSLSLN-PCSSLKGLGNVASNCGPRRSCGL-CENRSTQRGISVGFKILR 110
            V GC CE  G   L  PC S  GL +VAS CGPR SCG  CENR TQRGISV  KILR
Sbjct: 137 GVFGCDCENCGEFDLQCPCLSFDGLEDVASECGPRCSCGFECENRLTQRGISVRLKILR 194

[Close]
BLAST of MC01g1682 vs. TAIR 10
Match: AT3G03750.2 (SET domain protein 20 )

HSP 1 Score: 48.1 bits (113), Expect = 5.2e-06
Identity = 42/127 (33.07%), Postives = 52/127 (40.94%), Query Frame = 0 

Query: 1   LKICFQNSIDDHPLCLLHLRCPQSPSS-------------QRLGSISNPQAGHVQ---RE 60
           + I F NSID            Q P+S                GS S P    V    R 
Sbjct: 76  ISIPFHNSIDSQRYAYFIYTPFQIPASSPPPPRQWWGAAANECGSESRPCFDSVSESGRF 135

Query: 61  SVSLVDDWGRDVGCRCEIAGSLSLNPCSSLKGLGNVASNCGPRRSCGL-CENRSTQRGIS 111
            VSLVD    + GC CE         C +  G+  +A+ CG    CG  C NR TQ+G+S
Sbjct: 136 GVSLVD----ESGCECERCEE-GYCKCLAFAGMEEIANECGSGCGCGSDCSNRVTQKGVS 195

[Close]
BLAST of MC01g1682 vs. TAIR 10
Match: AT3G03750.1 (SET domain protein 20 )

HSP 1 Score: 48.1 bits (113), Expect = 5.2e-06
Identity = 42/127 (33.07%), Postives = 52/127 (40.94%), Query Frame = 0 

Query: 1   LKICFQNSIDDHPLCLLHLRCPQSPSS-------------QRLGSISNPQAGHVQ---RE 60
           + I F NSID            Q P+S                GS S P    V    R 
Sbjct: 76  ISIPFHNSIDSQRYAYFIYTPFQIPASSPPPPRQWWGAAANECGSESRPCFDSVSESGRF 135

Query: 61  SVSLVDDWGRDVGCRCEIAGSLSLNPCSSLKGLGNVASNCGPRRSCGL-CENRSTQRGIS 111
            VSLVD    + GC CE         C +  G+  +A+ CG    CG  C NR TQ+G+S
Sbjct: 136 GVSLVD----ESGCECERCEE-GYCKCLAFAGMEEIANECGSGCGCGSDCSNRVTQKGVS 195

The following BLAST results are available for this feature:
BLAST of MC01g1682 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SRV27.3e-0533.07Histone-lysine N-methyltransferase SUVR3 OS=Arabidopsis thaliana OX=3702 GN=SUVR... [more]
BLAST of MC01g1682 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN59651.23.17e-2152.10hypothetical protein Csa_002601 [Cucumis sativus][more]
XP_011652203.16.64e-2152.10histone-lysine N-methyltransferase SUVR3 isoform X2 [Cucumis sativus][more]
XP_004136662.16.97e-2152.10histone-lysine N-methyltransferase SUVR3 isoform X1 [Cucumis sativus][more]
XP_038906247.17.23e-2152.94histone-lysine N-methyltransferase SUVR3 [Benincasa hispida][more]
XP_022983826.12.55e-1962.65histone-lysine N-methyltransferase SUVR3 isoform X2 [Cucurbita maxima][more]
BLAST of MC01g1682 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LF103.38e-2152.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G822400 PE=4 SV=1[more]
A0A6J1J3G61.23e-1962.65histone-lysine N-methyltransferase SUVR3 isoform X2 OS=Cucurbita maxima OX=3661 ... [more]
A0A6J1J7061.29e-1962.65histone-lysine N-methyltransferase SUVR3 isoform X1 OS=Cucurbita maxima OX=3661 ... [more]
A0A1S3B8F33.51e-1948.74histone-lysine N-methyltransferase SUVR3 isoform X2 OS=Cucumis melo OX=3656 GN=L... [more]
A0A5D3DQF93.66e-1948.74Histone-lysine N-methyltransferase SUVR3 isoform X1 OS=Cucumis melo var. makuwa ... [more]
BLAST of MC01g1682 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G03750.25.2e-0633.07SET domain protein 20 [more]
AT3G03750.15.2e-0633.07SET domain protein 20 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC01g1682.1MC01g1682.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0016740 transferase activity