MC01g1661 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g1661
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	ABC transporter family protein
Location	MC01: 20749434 .. 20749571 (+)
RNA-Seq Expression	MC01g1661
Synteny	MC01g1661

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTCCGCCACCTCCATTAAAGAGAATATTCTTTTTGGGAAGGAGGATGCTGTCATGGACGAGGTAGTGGAGGCGGCTAAAGCTTTCAATGCTCATAATTTTACTGCTCAGTTTTCAAGAGGATACGAAACCCATGTA

mRNA sequence

CTTTCCGCCACCTCCATTAAAGAGAATATTCTTTTTGGGAAGGAGGATGCTGTCATGGACGAGGTAGTGGAGGCGGCTAAAGCTTTCAATGCTCATAATTTTACTGCTCAGTTTTCAAGAGGATACGAAACCCATGTA

Coding sequence (CDS)

CTTTCCGCCACCTCCATTAAAGAGAATATTCTTTTTGGGAAGGAGGATGCTGTCATGGACGAGGTAGTGGAGGCGGCTAAAGCTTTCAATGCTCATAATTTTACTGCTCAGTTTTCAAGAGGATACGAAACCCATGTA

Protein sequence

LSATSIKENILFGKEDAVMDEVVEAAKAFNAHNFTAQFSRGYETHV

Homology

[Close]

BLAST of MC01g1661 vs. ExPASy Swiss-Prot
Match: Q9LSJ8 (ABC transporter B family member 16 OS=Arabidopsis thaliana OX=3702 GN=ABCB16 PE=2 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 2.0e-12
Identity = 36/46 (78.26%), Postives = 38/46 (82.61%), Query Frame = 0


Query: 1   LSATSIKENILFGKEDAVMDEVVEAAKAFNAHNFTAQFSRGYETHV 47
           L ATSIKENILFGKEDA  DEVVEAAKA NAHNF +QF  GY+T V
Sbjct: 433 LFATSIKENILFGKEDASFDEVVEAAKASNAHNFISQFPHGYQTQV 478

[Close]

BLAST of MC01g1661 vs. ExPASy Swiss-Prot
Match: Q9LHD1 (ABC transporter B family member 15 OS=Arabidopsis thaliana OX=3702 GN=ABCB15 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 5.7e-12
Identity = 35/46 (76.09%), Postives = 38/46 (82.61%), Query Frame = 0


Query: 1   LSATSIKENILFGKEDAVMDEVVEAAKAFNAHNFTAQFSRGYETHV 47
           L AT+IKENILFGKEDA MD+VVEAAKA NAHNF +Q   GYET V
Sbjct: 446 LFATTIKENILFGKEDASMDDVVEAAKASNAHNFISQLPNGYETQV 491

[Close]

BLAST of MC01g1661 vs. ExPASy Swiss-Prot
Match: Q9LSJ5 (ABC transporter B family member 18 OS=Arabidopsis thaliana OX=3702 GN=ABCB18 PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 9.7e-12
Identity = 35/46 (76.09%), Postives = 38/46 (82.61%), Query Frame = 0


Query: 1   LSATSIKENILFGKEDAVMDEVVEAAKAFNAHNFTAQFSRGYETHV 47
           L ATSIKENILFGKEDA MDEVVEAAKA NAH+F +QF   Y+T V
Sbjct: 434 LFATSIKENILFGKEDASMDEVVEAAKASNAHSFISQFPNSYQTQV 479

[Close]

BLAST of MC01g1661 vs. ExPASy Swiss-Prot
Match: Q9LSJ6 (ABC transporter B family member 17 OS=Arabidopsis thaliana OX=3702 GN=ABCB17 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 6.3e-11
Identity = 34/46 (73.91%), Postives = 37/46 (80.43%), Query Frame = 0


Query: 1   LSATSIKENILFGKEDAVMDEVVEAAKAFNAHNFTAQFSRGYETHV 47
           L ATSI ENILFGKEDA +DEVVEAAKA NAH F +QF  GY+T V
Sbjct: 446 LFATSITENILFGKEDASLDEVVEAAKASNAHTFISQFPLGYKTQV 491

[Close]

BLAST of MC01g1661 vs. ExPASy Swiss-Prot
Match: Q9LSJ2 (ABC transporter B family member 22 OS=Arabidopsis thaliana OX=3702 GN=ABCB22 PE=3 SV=2)

HSP 1 Score: 66.2 bits (160), Expect = 1.1e-10
Identity = 33/46 (71.74%), Postives = 38/46 (82.61%), Query Frame = 0


Query: 1   LSATSIKENILFGKEDAVMDEVVEAAKAFNAHNFTAQFSRGYETHV 47
           L ATSI+ENILFGKEDA  DEVVEAAK+ NAH+F +QF  GY+T V
Sbjct: 433 LFATSIEENILFGKEDASFDEVVEAAKSSNAHDFISQFPLGYKTQV 478

[Close]

BLAST of MC01g1661 vs. NCBI nr
Match: XP_022990825.1 (ABC transporter B family member 15-like [Cucurbita maxima])

HSP 1 Score: 75.5 bits (184), Expect = 2.83e-14
Identity = 37/46 (80.43%), Postives = 40/46 (86.96%), Query Frame = 0


Query: 1   LSATSIKENILFGKEDAVMDEVVEAAKAFNAHNFTAQFSRGYETHV 46
           L ATSIKENILFGKEDA MDEVVEAAKA NAHNF +QF +GY+T V
Sbjct: 449 LFATSIKENILFGKEDATMDEVVEAAKASNAHNFLSQFPQGYDTQV 494

[Close]

BLAST of MC01g1661 vs. NCBI nr
Match: XP_022964967.1 (ABC transporter B family member 15-like [Cucurbita moschata])

HSP 1 Score: 75.5 bits (184), Expect = 2.83e-14
Identity = 37/46 (80.43%), Postives = 40/46 (86.96%), Query Frame = 0


Query: 1   LSATSIKENILFGKEDAVMDEVVEAAKAFNAHNFTAQFSRGYETHV 46
           L ATSIKENILFGKEDA MDEVVEAAKA NAHNF +QF +GY+T V
Sbjct: 449 LFATSIKENILFGKEDATMDEVVEAAKASNAHNFLSQFPQGYDTQV 494

[Close]

BLAST of MC01g1661 vs. NCBI nr
Match: XP_023517420.1 (ABC transporter B family member 15-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 75.5 bits (184), Expect = 2.83e-14
Identity = 37/46 (80.43%), Postives = 40/46 (86.96%), Query Frame = 0


Query: 1   LSATSIKENILFGKEDAVMDEVVEAAKAFNAHNFTAQFSRGYETHV 46
           L ATSIKENILFGKEDA MDEVVEAAKA NAHNF +QF +GY+T V
Sbjct: 449 LFATSIKENILFGKEDATMDEVVEAAKASNAHNFLSQFPQGYDTQV 494

[Close]

BLAST of MC01g1661 vs. NCBI nr
Match: KAG6602466.1 (ABC transporter B family member 15, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 75.5 bits (184), Expect = 2.83e-14
Identity = 37/46 (80.43%), Postives = 40/46 (86.96%), Query Frame = 0


Query: 1   LSATSIKENILFGKEDAVMDEVVEAAKAFNAHNFTAQFSRGYETHV 46
           L ATSIKENILFGKEDA MDEVVEAAKA NAHNF +QF +GY+T V
Sbjct: 449 LFATSIKENILFGKEDATMDEVVEAAKASNAHNFLSQFPQGYDTQV 494

[Close]

BLAST of MC01g1661 vs. NCBI nr
Match: XP_023517428.1 (ABC transporter B family member 15-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 75.5 bits (184), Expect = 2.83e-14
Identity = 37/46 (80.43%), Postives = 40/46 (86.96%), Query Frame = 0


Query: 1   LSATSIKENILFGKEDAVMDEVVEAAKAFNAHNFTAQFSRGYETHV 46
           L ATSIKENILFGKEDA MDEVVEAAKA NAHNF +QF +GY+T V
Sbjct: 334 LFATSIKENILFGKEDATMDEVVEAAKASNAHNFLSQFPQGYDTQV 379

[Close]

BLAST of MC01g1661 vs. ExPASy TrEMBL
Match: A0A6J1JR61 (ABC transporter B family member 15-like OS=Cucurbita maxima OX=3661 GN=LOC111487603 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.37e-14
Identity = 37/46 (80.43%), Postives = 40/46 (86.96%), Query Frame = 0


Query: 1   LSATSIKENILFGKEDAVMDEVVEAAKAFNAHNFTAQFSRGYETHV 46
           L ATSIKENILFGKEDA MDEVVEAAKA NAHNF +QF +GY+T V
Sbjct: 449 LFATSIKENILFGKEDATMDEVVEAAKASNAHNFLSQFPQGYDTQV 494

[Close]

BLAST of MC01g1661 vs. ExPASy TrEMBL
Match: A0A6J1HJ31 (ABC transporter B family member 15-like OS=Cucurbita moschata OX=3662 GN=LOC111464915 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.37e-14
Identity = 37/46 (80.43%), Postives = 40/46 (86.96%), Query Frame = 0


Query: 1   LSATSIKENILFGKEDAVMDEVVEAAKAFNAHNFTAQFSRGYETHV 46
           L ATSIKENILFGKEDA MDEVVEAAKA NAHNF +QF +GY+T V
Sbjct: 449 LFATSIKENILFGKEDATMDEVVEAAKASNAHNFLSQFPQGYDTQV 494

[Close]

BLAST of MC01g1661 vs. ExPASy TrEMBL
Match: A0A6J1BVL9 (LOW QUALITY PROTEIN: ABC transporter B family member 15-like OS=Momordica charantia OX=3673 GN=LOC111006155 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.87e-14
Identity = 36/46 (78.26%), Postives = 40/46 (86.96%), Query Frame = 0


Query: 1   LSATSIKENILFGKEDAVMDEVVEAAKAFNAHNFTAQFSRGYETHV 46
           L ATSIKENILFGKEDA MDEV++AAKA NAHNF +QF +GYET V
Sbjct: 433 LFATSIKENILFGKEDATMDEVIDAAKASNAHNFISQFPQGYETQV 478

[Close]

BLAST of MC01g1661 vs. ExPASy TrEMBL
Match: A0A1J3EYF6 (ABC transporter B family member 17 (Fragment) OS=Noccaea caerulescens OX=107243 GN=LC_TR7397_c19_g1_i1_g.25607 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.16e-14
Identity = 34/46 (73.91%), Postives = 39/46 (84.78%), Query Frame = 0


Query: 1  LSATSIKENILFGKEDAVMDEVVEAAKAFNAHNFTAQFSRGYETHV 46
          L ATSI+ENILFGKEDA MDE+VEAAKA NAH+F +QF  GY+T V
Sbjct: 9  LFATSIEENILFGKEDASMDEIVEAAKASNAHDFISQFPHGYKTQV 54

[Close]

BLAST of MC01g1661 vs. ExPASy TrEMBL
Match: A0A6J1BWU3 (ABC transporter B family member 15-like OS=Momordica charantia OX=3673 GN=LOC111006245 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 3.49e-14
Identity = 36/46 (78.26%), Postives = 39/46 (84.78%), Query Frame = 0


Query: 1   LSATSIKENILFGKEDAVMDEVVEAAKAFNAHNFTAQFSRGYETHV 46
           L ATSIKENILFGKEDA MDEVV+ AKA NAHNF +QF +GYET V
Sbjct: 456 LFATSIKENILFGKEDATMDEVVDVAKASNAHNFISQFPKGYETQV 501

[Close]

BLAST of MC01g1661 vs. TAIR 10
Match: AT3G28360.1 (P-glycoprotein 16 )

HSP 1 Score: 72.0 bits (175), Expect = 1.4e-13
Identity = 36/46 (78.26%), Postives = 38/46 (82.61%), Query Frame = 0


Query: 1   LSATSIKENILFGKEDAVMDEVVEAAKAFNAHNFTAQFSRGYETHV 47
           L ATSIKENILFGKEDA  DEVVEAAKA NAHNF +QF  GY+T V
Sbjct: 433 LFATSIKENILFGKEDASFDEVVEAAKASNAHNFISQFPHGYQTQV 478

[Close]

BLAST of MC01g1661 vs. TAIR 10
Match: AT3G28345.1 (ABC transporter family protein )

HSP 1 Score: 70.5 bits (171), Expect = 4.1e-13
Identity = 35/46 (76.09%), Postives = 38/46 (82.61%), Query Frame = 0


Query: 1   LSATSIKENILFGKEDAVMDEVVEAAKAFNAHNFTAQFSRGYETHV 47
           L AT+IKENILFGKEDA MD+VVEAAKA NAHNF +Q   GYET V
Sbjct: 446 LFATTIKENILFGKEDASMDDVVEAAKASNAHNFISQLPNGYETQV 491

[Close]

BLAST of MC01g1661 vs. TAIR 10
Match: AT3G28390.1 (P-glycoprotein 18 )

HSP 1 Score: 69.7 bits (169), Expect = 6.9e-13
Identity = 35/46 (76.09%), Postives = 38/46 (82.61%), Query Frame = 0


Query: 1   LSATSIKENILFGKEDAVMDEVVEAAKAFNAHNFTAQFSRGYETHV 47
           L ATSIKENILFGKEDA MDEVVEAAKA NAH+F +QF   Y+T V
Sbjct: 434 LFATSIKENILFGKEDASMDEVVEAAKASNAHSFISQFPNSYQTQV 479

[Close]

BLAST of MC01g1661 vs. TAIR 10
Match: AT3G28380.1 (P-glycoprotein 17 )

HSP 1 Score: 67.0 bits (162), Expect = 4.5e-12
Identity = 34/46 (73.91%), Postives = 37/46 (80.43%), Query Frame = 0


Query: 1   LSATSIKENILFGKEDAVMDEVVEAAKAFNAHNFTAQFSRGYETHV 47
           L ATSI ENILFGKEDA +DEVVEAAKA NAH F +QF  GY+T V
Sbjct: 446 LFATSITENILFGKEDASLDEVVEAAKASNAHTFISQFPLGYKTQV 491

[Close]

BLAST of MC01g1661 vs. TAIR 10
Match: AT3G28415.1 (ABC transporter family protein )

HSP 1 Score: 66.2 bits (160), Expect = 7.6e-12
Identity = 33/46 (71.74%), Postives = 38/46 (82.61%), Query Frame = 0


Query: 1   LSATSIKENILFGKEDAVMDEVVEAAKAFNAHNFTAQFSRGYETHV 47
           L ATSI+ENILFGKEDA  DEVVEAAK+ NAH+F +QF  GY+T V
Sbjct: 425 LFATSIEENILFGKEDASFDEVVEAAKSSNAHDFISQFPLGYKTQV 470

The following BLAST results are available for this feature:

BLAST of MC01g1661 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSJ8	2.0e-12	78.26	ABC transporter B family member 16 OS=Arabidopsis thaliana OX=3702 GN=ABCB16 PE=...	[more]
Q9LHD1	5.7e-12	76.09	ABC transporter B family member 15 OS=Arabidopsis thaliana OX=3702 GN=ABCB15 PE=...	[more]
Q9LSJ5	9.7e-12	76.09	ABC transporter B family member 18 OS=Arabidopsis thaliana OX=3702 GN=ABCB18 PE=...	[more]
Q9LSJ6	6.3e-11	73.91	ABC transporter B family member 17 OS=Arabidopsis thaliana OX=3702 GN=ABCB17 PE=...	[more]
Q9LSJ2	1.1e-10	71.74	ABC transporter B family member 22 OS=Arabidopsis thaliana OX=3702 GN=ABCB22 PE=...	[more]

BLAST of MC01g1661 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022990825.1	2.83e-14	80.43	ABC transporter B family member 15-like [Cucurbita maxima]	[more]
XP_022964967.1	2.83e-14	80.43	ABC transporter B family member 15-like [Cucurbita moschata]	[more]
XP_023517420.1	2.83e-14	80.43	ABC transporter B family member 15-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6602466.1	2.83e-14	80.43	ABC transporter B family member 15, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_023517428.1	2.83e-14	80.43	ABC transporter B family member 15-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MC01g1661 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JR61	1.37e-14	80.43	ABC transporter B family member 15-like OS=Cucurbita maxima OX=3661 GN=LOC111487...	[more]
A0A6J1HJ31	1.37e-14	80.43	ABC transporter B family member 15-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1BVL9	1.87e-14	78.26	LOW QUALITY PROTEIN: ABC transporter B family member 15-like OS=Momordica charan...	[more]
A0A1J3EYF6	2.16e-14	73.91	ABC transporter B family member 17 (Fragment) OS=Noccaea caerulescens OX=107243 ...	[more]
A0A6J1BWU3	3.49e-14	78.26	ABC transporter B family member 15-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]

BLAST of MC01g1661 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G28360.1	1.4e-13	78.26	P-glycoprotein 16	[more]
AT3G28345.1	4.1e-13	76.09	ABC transporter family protein	[more]
AT3G28390.1	6.9e-13	76.09	P-glycoprotein 18	[more]
AT3G28380.1	4.5e-12	73.91	P-glycoprotein 17	[more]
AT3G28415.1	7.6e-12	71.74	ABC transporter family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 3..46 e-value: 1.3E-11 score: 45.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 3..46
None	No IPR available	PANTHER	PTHR24221:SF556	BNAA09G02310D PROTEIN	coord: 1..45
IPR039421	Type 1 protein exporter	PANTHER	PTHR24221	ATP-BINDING CASSETTE SUB-FAMILY B	coord: 1..45

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g1661.1	MC01g1661.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0140359	ABC-type transporter activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity