MC01g1602 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g1602
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	60S ribosomal protein L37a
Location	MC01: 20233738 .. 20234016 (+)
RNA-Seq Expression	MC01g1602
Synteny	MC01g1602

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAAAAAGAACCAAGAAGGCTGTCATTGTCAGGAAATACAGTACTAAATATGGTGCTAGTTTGAGGAATCAAATTAAGAAGATGGAAGTCAGAAGTCAGCCAGCAAAGCAATTACTTCAGCAAGTCTTGCAGAAAGTATGCCATGAAGAGGAAGGCTGTTGATATGCGTTTGTAAGGACTGGAAAGATGAAAGCAGGAGGTGCCTACACATTGAACATTGCAAGTGCCATGACCGTTAGGAGCACACTCCGAAGGCTGAGGGAGCAGACCAAGAGC

mRNA sequence

ATGAGAAAAAGAACCAAGAAGGCTGTCATTGTCAGGAAATACAGTACTAAATATGGTGCTAGTTTGAGGAATCAAATTAAGAAGATGGAAGTCAGCCAGCAAAGCAATTACTTCAGCAAGTCTTGCAGAAAGTATGCCATGAAGAGGAAGGCTGTTATATGCGTTTGTAAGGACGGAAAGATGAAAGCAGGAGGTGCCTACACATTGAACATTGCAAGTGCCATGACCGTTAGGAGCACACTCCGAAGGCTGAGGGAGCAGACCAAGAGC

Coding sequence (CDS)

ATGAGAAAAAGAACCAAGAAGGCTGTCATTGTCAGGAAATACAGTACTAAATATGGTGCTAGTTTGAGGAATCAAATTAAGAAGATGGAAGTCAGCCAGCAAAGCAATTACTTCAGCAAGTCTTGCAGAAAGTATGCCATGAAGAGGAAGGCTGTTATATGCGTTTGTAAGGACGGAAAGATGAAAGCAGGAGGTGCCTACACATTGAACATTGCAAGTGCCATGACCGTTAGGAGCACACTCCGAAGGCTGAGGGAGCAGACCAAGAGC

Protein sequence

MRKRTKKAVIVRKYSTKYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAVICVCKDGKMKAGGAYTLNIASAMTVRSTLRRLREQTKS

Homology

[Close]

BLAST of MC01g1602 vs. ExPASy Swiss-Prot
Match: Q9XHE4 (60S ribosomal protein L37a OS=Gossypium hirsutum OX=3635 GN=RPL37A PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.4e-25
Identity = 69/92 (75.00%), Postives = 76/92 (82.61%), Query Frame = 0


Query: 1  MRKRTKKAVIVRKYSTKYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAV-ICVCKD- 60
          M KRTKKA IV KY T+YGASLR QIKKMEVSQ S YF + C KYA+KRKAV I  CK  
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKAC 60

Query: 61 GKMKAGGAYTLNIASAMTVRSTLRRLREQTKS 91
          GK+KAGGAYTLN ASA+TVRST+RRLREQT+S
Sbjct: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of MC01g1602 vs. ExPASy Swiss-Prot
Match: P0DKK1 (60S ribosomal protein L37a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0679700 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.8e-25
Identity = 67/92 (72.83%), Postives = 77/92 (83.70%), Query Frame = 0


Query: 1  MRKRTKKAVIVRKYSTKYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAV-ICVCKD- 60
          M KRTKKA IV KY T+YGASLR QIKKMEVSQ S YF + C K+A+KRKAV I  CKD 
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDC 60

Query: 61 GKMKAGGAYTLNIASAMTVRSTLRRLREQTKS 91
          GK+KAGGAYT+N ASA+TVRST+RRLREQT++
Sbjct: 61 GKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 92

[Close]

BLAST of MC01g1602 vs. ExPASy Swiss-Prot
Match: P0DKK2 (60S ribosomal protein L37a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0557000 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.8e-25
Identity = 67/92 (72.83%), Postives = 77/92 (83.70%), Query Frame = 0


Query: 1  MRKRTKKAVIVRKYSTKYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAV-ICVCKD- 60
          M KRTKKA IV KY T+YGASLR QIKKMEVSQ S YF + C K+A+KRKAV I  CKD 
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDC 60

Query: 61 GKMKAGGAYTLNIASAMTVRSTLRRLREQTKS 91
          GK+KAGGAYT+N ASA+TVRST+RRLREQT++
Sbjct: 61 GKVKAGGAYTMNTASAVTVRSTIRRLREQTEA 92

[Close]

BLAST of MC01g1602 vs. ExPASy Swiss-Prot
Match: Q9SRK6 (Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37AB PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 4.0e-25
Identity = 66/92 (71.74%), Postives = 76/92 (82.61%), Query Frame = 0


Query: 1  MRKRTKKAVIVRKYSTKYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAV-ICVCKD- 60
          M KRTKKA IV KY T+YGASLR QIKKMEVSQ + YF + C KY++KRK V I  CKD 
Sbjct: 1  MTKRTKKARIVGKYGTRYGASLRKQIKKMEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDC 60

Query: 61 GKMKAGGAYTLNIASAMTVRSTLRRLREQTKS 91
          GK+KAGGAYT+N ASA+TVRST+RRLREQT+S
Sbjct: 61 GKVKAGGAYTMNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of MC01g1602 vs. ExPASy Swiss-Prot
Match: Q9ZRS8 (60S ribosomal protein L37a OS=Pseudotsuga menziesii OX=3357 GN=RPL37A PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.5e-24
Identity = 66/91 (72.53%), Postives = 75/91 (82.42%), Query Frame = 0


Query: 1  MRKRTKKAVIVRKYSTKYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAV-ICVCKD- 60
          M KRTKKA IV KY T+YGASLR QIKKMEVSQ S +F + C K+A+KRKAV I  CKD 
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKFAVKRKAVGIWGCKDC 60

Query: 61 GKMKAGGAYTLNIASAMTVRSTLRRLREQTK 90
          GK+KAGGAYTLN  SA+TVRST+RRLREQT+
Sbjct: 61 GKVKAGGAYTLNTPSAVTVRSTIRRLREQTE 91

[Close]

BLAST of MC01g1602 vs. NCBI nr
Match: XP_002882705.1 (60S ribosomal protein L37a-1 [Arabidopsis lyrata subsp. lyrata] >EFH58964.1 60S ribosomal protein L37a [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 120 bits (302), Expect = 1.96e-33
Identity = 70/92 (76.09%), Postives = 78/92 (84.78%), Query Frame = 0


Query: 1  MRKRTKKAVIVRKYSTKYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAV-ICVCKD- 60
          M KRTKKA IV KY T+YGASLR QIKKMEVSQ SNYF + C KYA+KRKAV I  CKD 
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSNYFCEFCGKYAVKRKAVGIWGCKDC 60

Query: 61 GKMKAGGAYTLNIASAMTVRSTLRRLREQTKS 90
          GK+KAGGAYT+N ASA+TVRST+RRLREQT+S
Sbjct: 61 GKVKAGGAYTMNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of MC01g1602 vs. NCBI nr
Match: XP_002268650.1 (PREDICTED: 60S ribosomal protein L37a [Vitis vinifera])

HSP 1 Score: 120 bits (301), Expect = 2.78e-33
Identity = 70/92 (76.09%), Postives = 77/92 (83.70%), Query Frame = 0


Query: 1  MRKRTKKAVIVRKYSTKYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAV-ICVCKD- 60
          M KRTKKA IV KY T+YGASLR QIKKMEVSQ S YF + C KYA+KRKAV I  CKD 
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWACKDC 60

Query: 61 GKMKAGGAYTLNIASAMTVRSTLRRLREQTKS 90
          GK+KAGGAYTLN ASA+TVRST+RRLREQT+S
Sbjct: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of MC01g1602 vs. NCBI nr
Match: TYI66379.1 (hypothetical protein E1A91_D09G220000v1 [Gossypium mustelinum])

HSP 1 Score: 119 bits (299), Expect = 5.60e-33
Identity = 70/92 (76.09%), Postives = 77/92 (83.70%), Query Frame = 0


Query: 1  MRKRTKKAVIVRKYSTKYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAV-ICVCKD- 60
          M KRTKKA IV KY T+YGASLR QIKKMEVSQ S YF + C KYA+KRKAV I  CKD 
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWSCKDC 60

Query: 61 GKMKAGGAYTLNIASAMTVRSTLRRLREQTKS 90
          GK+KAGGAYTLN ASA+TVRST+RRLREQT+S
Sbjct: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of MC01g1602 vs. NCBI nr
Match: KAG7576786.1 (Ribosomal protein L37ae, partial [Arabidopsis thaliana x Arabidopsis arenosa])

HSP 1 Score: 120 bits (300), Expect = 7.32e-33
Identity = 70/92 (76.09%), Postives = 77/92 (83.70%), Query Frame = 0


Query: 1   MRKRTKKAVIVRKYSTKYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAV-ICVCKD- 60
           M KRTKKA IV KY T+YGASLR QIKKMEVSQ S YF + C KYA+KRKAV I  CKD 
Sbjct: 22  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 81

Query: 61  GKMKAGGAYTLNIASAMTVRSTLRRLREQTKS 90
           GKMKAGGAYT+N ASA+TVRST+RRLREQT+S
Sbjct: 82  GKMKAGGAYTMNTASAVTVRSTIRRLREQTES 113

[Close]

BLAST of MC01g1602 vs. NCBI nr
Match: XP_031387502.1 (60S ribosomal protein L37a [Punica granatum] >XP_031405925.1 60S ribosomal protein L37a isoform X2 [Punica granatum] >PKI53527.1 hypothetical protein CRG98_026072 [Punica granatum])

HSP 1 Score: 119 bits (298), Expect = 7.96e-33
Identity = 70/92 (76.09%), Postives = 77/92 (83.70%), Query Frame = 0


Query: 1  MRKRTKKAVIVRKYSTKYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAV-ICVCKD- 60
          M KRTKKA IV KY T+YGASLR QIKKMEVSQ S YF + C KYA+KRKAV I  CKD 
Sbjct: 1  MAKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSRYFCEFCGKYAVKRKAVGIWGCKDC 60

Query: 61 GKMKAGGAYTLNIASAMTVRSTLRRLREQTKS 90
          GK+KAGGAYTLN ASA+TVRST+RRLREQT+S
Sbjct: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of MC01g1602 vs. ExPASy TrEMBL
Match: D7L9S8 (60S ribosomal protein L37a OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_897293 PE=3 SV=1)

HSP 1 Score: 120 bits (302), Expect = 9.47e-34
Identity = 70/92 (76.09%), Postives = 78/92 (84.78%), Query Frame = 0


Query: 1  MRKRTKKAVIVRKYSTKYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAV-ICVCKD- 60
          M KRTKKA IV KY T+YGASLR QIKKMEVSQ SNYF + C KYA+KRKAV I  CKD 
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSNYFCEFCGKYAVKRKAVGIWGCKDC 60

Query: 61 GKMKAGGAYTLNIASAMTVRSTLRRLREQTKS 90
          GK+KAGGAYT+N ASA+TVRST+RRLREQT+S
Sbjct: 61 GKVKAGGAYTMNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of MC01g1602 vs. ExPASy TrEMBL
Match: F6GVD3 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0021g01000 PE=3 SV=1)

HSP 1 Score: 120 bits (301), Expect = 1.34e-33
Identity = 70/92 (76.09%), Postives = 77/92 (83.70%), Query Frame = 0


Query: 1  MRKRTKKAVIVRKYSTKYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAV-ICVCKD- 60
          M KRTKKA IV KY T+YGASLR QIKKMEVSQ S YF + C KYA+KRKAV I  CKD 
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWACKDC 60

Query: 61 GKMKAGGAYTLNIASAMTVRSTLRRLREQTKS 90
          GK+KAGGAYTLN ASA+TVRST+RRLREQT+S
Sbjct: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of MC01g1602 vs. ExPASy TrEMBL
Match: A0A5D2TMG0 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D09G220000v1 PE=3 SV=1)

HSP 1 Score: 119 bits (299), Expect = 2.71e-33
Identity = 70/92 (76.09%), Postives = 77/92 (83.70%), Query Frame = 0


Query: 1  MRKRTKKAVIVRKYSTKYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAV-ICVCKD- 60
          M KRTKKA IV KY T+YGASLR QIKKMEVSQ S YF + C KYA+KRKAV I  CKD 
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWSCKDC 60

Query: 61 GKMKAGGAYTLNIASAMTVRSTLRRLREQTKS 90
          GK+KAGGAYTLN ASA+TVRST+RRLREQT+S
Sbjct: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of MC01g1602 vs. ExPASy TrEMBL
Match: A0A1U7XSD1 (60S ribosomal protein L37a OS=Nicotiana sylvestris OX=4096 GN=LOC104239566 PE=3 SV=1)

HSP 1 Score: 119 bits (298), Expect = 3.85e-33
Identity = 70/92 (76.09%), Postives = 77/92 (83.70%), Query Frame = 0


Query: 1  MRKRTKKAVIVRKYSTKYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAV-ICVCKD- 60
          M KRTKKA IV KY T+YGASLR QIKKMEVSQ S YF + C KYA+KRKAV I  CKD 
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 60

Query: 61 GKMKAGGAYTLNIASAMTVRSTLRRLREQTKS 90
          GK+KAGGAYTLN ASA+TVRST+RRLREQT+S
Sbjct: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of MC01g1602 vs. ExPASy TrEMBL
Match: A0A6J1ICH2 (60S ribosomal protein L37a OS=Cucurbita maxima OX=3661 GN=LOC111471808 PE=3 SV=1)

HSP 1 Score: 119 bits (298), Expect = 3.85e-33
Identity = 70/92 (76.09%), Postives = 77/92 (83.70%), Query Frame = 0


Query: 1  MRKRTKKAVIVRKYSTKYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAV-ICVCKD- 60
          M KRTKKA IV KY T+YGASLR QIKKMEVSQ S YF + C KYA+KRKAV I  CKD 
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDC 60

Query: 61 GKMKAGGAYTLNIASAMTVRSTLRRLREQTKS 90
          GK+KAGGAYTLN ASA+TVRST+RRLREQT+S
Sbjct: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of MC01g1602 vs. TAIR 10
Match: AT3G10950.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 115.2 bits (287), Expect = 2.8e-26
Identity = 66/92 (71.74%), Postives = 76/92 (82.61%), Query Frame = 0


Query: 1  MRKRTKKAVIVRKYSTKYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAV-ICVCKD- 60
          M KRTKKA IV KY T+YGASLR QIKKMEVSQ + YF + C KY++KRK V I  CKD 
Sbjct: 1  MTKRTKKARIVGKYGTRYGASLRKQIKKMEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDC 60

Query: 61 GKMKAGGAYTLNIASAMTVRSTLRRLREQTKS 91
          GK+KAGGAYT+N ASA+TVRST+RRLREQT+S
Sbjct: 61 GKVKAGGAYTMNTASAVTVRSTIRRLREQTES 92

[Close]

BLAST of MC01g1602 vs. TAIR 10
Match: AT3G60245.1 (Zinc-binding ribosomal protein family protein )

HSP 1 Score: 111.7 bits (278), Expect = 3.1e-25
Identity = 64/89 (71.91%), Postives = 72/89 (80.90%), Query Frame = 0


Query: 1  MRKRTKKAVIVRKYSTKYGASLRNQIKKMEVSQQSNYFSKSCRKYAMKRKAV-ICVCKD- 60
          M KRTKK  IV KY T+YGAS+R QIKKMEVSQ S YF + C KY +KRKAV I  CKD 
Sbjct: 1  MAKRTKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDC 60

Query: 61 GKMKAGGAYTLNIASAMTVRSTLRRLREQ 88
          GK+KAGGAYT+N ASA+TVRST+RRLREQ
Sbjct: 61 GKVKAGGAYTMNTASAVTVRSTIRRLREQ 89

The following BLAST results are available for this feature:

BLAST of MC01g1602 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XHE4	1.4e-25	75.00	60S ribosomal protein L37a OS=Gossypium hirsutum OX=3635 GN=RPL37A PE=3 SV=1	[more]
P0DKK1	1.8e-25	72.83	60S ribosomal protein L37a-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g06...	[more]
P0DKK2	1.8e-25	72.83	60S ribosomal protein L37a-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g05...	[more]
Q9SRK6	4.0e-25	71.74	Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL37AB...	[more]
Q9ZRS8	1.5e-24	72.53	60S ribosomal protein L37a OS=Pseudotsuga menziesii OX=3357 GN=RPL37A PE=3 SV=1	[more]

BLAST of MC01g1602 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_002882705.1	1.96e-33	76.09	60S ribosomal protein L37a-1 [Arabidopsis lyrata subsp. lyrata] >EFH58964.1 60S ...	[more]
XP_002268650.1	2.78e-33	76.09	PREDICTED: 60S ribosomal protein L37a [Vitis vinifera]	[more]
TYI66379.1	5.60e-33	76.09	hypothetical protein E1A91_D09G220000v1 [Gossypium mustelinum]	[more]
KAG7576786.1	7.32e-33	76.09	Ribosomal protein L37ae, partial [Arabidopsis thaliana x Arabidopsis arenosa]	[more]
XP_031387502.1	7.96e-33	76.09	60S ribosomal protein L37a [Punica granatum] >XP_031405925.1 60S ribosomal prote...	[more]

BLAST of MC01g1602 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
D7L9S8	9.47e-34	76.09	60S ribosomal protein L37a OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALY...	[more]
F6GVD3	1.34e-33	76.09	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_15s0021g01000 PE=3 SV=...	[more]
A0A5D2TMG0	2.71e-33	76.09	Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D09G220000v1 P...	[more]
A0A1U7XSD1	3.85e-33	76.09	60S ribosomal protein L37a OS=Nicotiana sylvestris OX=4096 GN=LOC104239566 PE=3 ...	[more]
A0A6J1ICH2	3.85e-33	76.09	60S ribosomal protein L37a OS=Cucurbita maxima OX=3661 GN=LOC111471808 PE=3 SV=1	[more]

BLAST of MC01g1602 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10950.1	2.8e-26	71.74	Zinc-binding ribosomal protein family protein	[more]
AT3G60245.1	3.1e-25	71.91	Zinc-binding ribosomal protein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011331	Ribosomal protein L37ae/L37e	GENE3D	2.20.25.30		coord: 1..90 e-value: 2.3E-24 score: 87.3
IPR002674	Ribosomal protein L37ae	PFAM	PF01780	Ribosomal_L37ae	coord: 4..86 e-value: 1.7E-20 score: 72.9
None	No IPR available	PANTHER	PTHR48132:SF2	60S RIBOSOMAL PROTEIN L37A-2	coord: 1..89
None	No IPR available	PANTHER	PTHR48132	ZGC:171772	coord: 1..89
IPR011332	Zinc-binding ribosomal protein	SUPERFAMILY	57829	Zn-binding ribosomal proteins	coord: 10..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g1602.1	MC01g1602.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022626	cytosolic ribosome
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome