MC01g1541 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g1541
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	agamous-like MADS-box protein AGL61
Location	MC01: 19640793 .. 19641440 (+)
RNA-Seq Expression	MC01g1541
Synteny	MC01g1541

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAAGCAAACAAAGGGCCGACAAAAGATCGAAATGAAGAAGATAGAAAACGAGGACGATCGACTGATAACGTTCTCGAAGCGCAGGTCAGGCATCTACAAGAAGGCGAGCGAACTAGCAACACTATGCGGGGCTGAAGTCGGTGTCGTCGTATTCTCACCCGCGGGTAAGCCCTTCTCGTTTGCTCATCCCTCGATCGAATCCGTGGCCAACAAGTTCATCAACGAAACGCCGCAGCCCAACGACAACACTCACCCTCTCGTGGAAGCTCACAGGCGGGTGAGGATAAACGAGTTGAACCAACAACACAATCAACTTTTGAGCCAACTCGAGGCAGAGAAGGAAAAAGGGAAGGCACTAGAGAAAATGAAGAAGGTGAGAGGAAATAGTAATGGGCGTGGTTGGTGGGAGACTCCCACAGAGGAAATGGGGATGGAAGAGCTTCAACAAGTGGATGCTTCATTAGGAGATTTGTACACAAATGTATGCCATCAATTGAGAGAGAGAGGAGTCATTGGATCTTCTTCTTCTTCTTATTCTTCCATGCCCTTTAATGGAGCTGGTGAAGAAACTATTCCCTTTAACATTTTGGCAAATGGGCCTCCACCTCCTACTAATGCTTATCTCCCCCATGCCTTTGATTATGGA

mRNA sequence

AAGAAGCAAACAAAGGGCCGACAAAAGATCGAAATGAAGAAGATAGAAAACGAGGACGATCGACTGATAACGTTCTCGAAGCGCAGGTCAGGCATCTACAAGAAGGCGAGCGAACTAGCAACACTATGCGGGGCTGAAGTCGGTGTCGTCGTATTCTCACCCGCGGGTAAGCCCTTCTCGTTTGCTCATCCCTCGATCGAATCCGTGGCCAACAAGTTCATCAACGAAACGCCGCAGCCCAACGACAACACTCACCCTCTCGTGGAAGCTCACAGGCGGGTGAGGATAAACGAGTTGAACCAACAACACAATCAACTTTTGAGCCAACTCGAGGCAGAGAAGGAAAAAGGGAAGGCACTAGAGAAAATGAAGAAGGTGAGAGGAAATAGTAATGGGCGTGGTTGGTGGGAGACTCCCACAGAGGAAATGGGGATGGAAGAGCTTCAACAAGTGGATGCTTCATTAGGAGATTTGTACACAAATGTATGCCATCAATTGAGAGAGAGAGGAGTCATTGGATCTTCTTCTTCTTCTTATTCTTCCATGCCCTTTAATGGAGCTGGTGAAGAAACTATTCCCTTTAACATTTTGGCAAATGGGCCTCCACCTCCTACTAATGCTTATCTCCCCCATGCCTTTGATTATGGA

Coding sequence (CDS)

AAGAAGCAAACAAAGGGCCGACAAAAGATCGAAATGAAGAAGATAGAAAACGAGGACGATCGACTGATAACGTTCTCGAAGCGCAGGTCAGGCATCTACAAGAAGGCGAGCGAACTAGCAACACTATGCGGGGCTGAAGTCGGTGTCGTCGTATTCTCACCCGCGGGTAAGCCCTTCTCGTTTGCTCATCCCTCGATCGAATCCGTGGCCAACAAGTTCATCAACGAAACGCCGCAGCCCAACGACAACACTCACCCTCTCGTGGAAGCTCACAGGCGGGTGAGGATAAACGAGTTGAACCAACAACACAATCAACTTTTGAGCCAACTCGAGGCAGAGAAGGAAAAAGGGAAGGCACTAGAGAAAATGAAGAAGGTGAGAGGAAATAGTAATGGGCGTGGTTGGTGGGAGACTCCCACAGAGGAAATGGGGATGGAAGAGCTTCAACAAGTGGATGCTTCATTAGGAGATTTGTACACAAATGTATGCCATCAATTGAGAGAGAGAGGAGTCATTGGATCTTCTTCTTCTTCTTATTCTTCCATGCCCTTTAATGGAGCTGGTGAAGAAACTATTCCCTTTAACATTTTGGCAAATGGGCCTCCACCTCCTACTAATGCTTATCTCCCCCATGCCTTTGATTATGGA

Protein sequence

KKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPSIESVANKFINETPQPNDNTHPLVEAHRRVRINELNQQHNQLLSQLEAEKEKGKALEKMKKVRGNSNGRGWWETPTEEMGMEELQQVDASLGDLYTNVCHQLRERGVIGSSSSSYSSMPFNGAGEETIPFNILANGPPPPTNAYLPHAFDYG

Homology

[Close]

BLAST of MC01g1541 vs. ExPASy Swiss-Prot
Match: Q9FKK2 (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.3e-33
Identity = 79/160 (49.38%), Postives = 108/160 (67.50%), Query Frame = 0


Query: 2   KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 61
           K++KGRQKIEM K++NE +  +TFSKRRSG++KKASEL TLCGAEV +VVFSP  K FSF
Sbjct: 3   KKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSF 62

Query: 62  AHPSIESVANKFINETPQP--NDNTHPLVEAHRRVRINELNQQHNQLLSQLEAEKEKGKA 121
            HP+++SV ++FIN  P P    N   L E  R   + +LN    Q+LSQLE EK+K   
Sbjct: 63  GHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKK--- 122

Query: 122 LEKMKKVRGNSNGRG-WWETPTEEMGMEELQQVDASLGDL 159
            +++KK+R  +   G WWE P EE+ + +L+    +L +L
Sbjct: 123 YDELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENL 159

[Close]

BLAST of MC01g1541 vs. ExPASy Swiss-Prot
Match: Q4PSU4 (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 9.5e-33
Identity = 85/208 (40.87%), Postives = 124/208 (59.62%), Query Frame = 0


Query: 1   KKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFS 60
           KK++ GRQKI M KI+ E  R +TFSKRR+G++KKASEL TLCGAE+G++VFSPA KPFS
Sbjct: 58  KKESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFS 117

Query: 61  FAHPSIESVANKFINETPQPNDNTHPLVEAHRRVRINELNQQHNQLLSQLEAEKEKGKAL 120
           F HPS+ESV +++++        +  L  +       ELN Q   +LS++E EK+KG+A+
Sbjct: 118 FGHPSVESVLDRYVSRNNMSLAQSQQLQGS--PAASCELNMQLTHILSEVEEEKKKGQAM 177

Query: 121 EKMKKVRGNSNGRGWWETPTEEMGMEELQQVDASLGDLYTNVCHQLRERGVIGSSSSSYS 180
           E+M+K     +   WWE P EEM M +LQ++  +L         +LR+  V   +S + +
Sbjct: 178 EEMRKESVRRSMINWWEKPVEEMNMVQLQEMKYAL--------EELRKTVVTNMASFNEA 237

Query: 181 SMPFNGAGEETIPFNILANGPPPPTNAY 209
                G  +  +      N P  P+N Y
Sbjct: 238 KDDVFGFLDNKVTVPPYVNMPSGPSNIY 255

[Close]

BLAST of MC01g1541 vs. ExPASy Swiss-Prot
Match: O64703 (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.7e-21
Identity = 60/146 (41.10%), Postives = 100/146 (68.49%), Query Frame = 0


Query: 6   GRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSFAHPS 65
           GR+KI+M+ +++ + R +TFSKRR+G++KKASELATLC AE+G+VVFSP GKPFS+  P+
Sbjct: 2   GRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKPN 61

Query: 66  IESVANKFINETPQPNDNTHPLVEAHRRVRINELNQQHNQLLSQLEAEKEKG-KALEKMK 125
           ++SVA +F+ E    +D+       + R ++  L+++ + L  ++EAEKE+G K+ EK++
Sbjct: 62  LDSVAERFMREY-DDSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEKERGEKSQEKLE 121

Query: 126 KVRGNSNGRGWWETPTEEMGMEELQQ 151
                S G   ++   E + ++EL +
Sbjct: 122 -----SAGDERFKESIETLTLDELNE 141

[Close]

BLAST of MC01g1541 vs. ExPASy Swiss-Prot
Match: Q9LMM8 (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 6.4e-21
Identity = 71/221 (32.13%), Postives = 119/221 (53.85%), Query Frame = 0


Query: 2   KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 61
           ++  GR+KIE+ K+ NE +  +TFSKRRSG++KK SEL TLC AE+ ++VFSP+GK +SF
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  AHPSIESVANKFINETPQPNDNTHPLVEAHRRVRINELNQQHNQLLSQLEAEKEKGKALE 121
            HP++  + +  +    + N NT+   E+  ++RI  LN+   +++++ E E+E  +++ 
Sbjct: 63  GHPNVNKLLDHSLGRVIRHN-NTN-FAESRTKLRIQMLNESLTEVMAEKEKEQETKQSI- 122

Query: 122 KMKKVRGNSNGRGWWETPTEEMGMEELQQVDASLGDLYTNV---CHQLRERGV---IGSS 181
            ++  R N +   WW     E+ + +   +   L  L   V     QL  R +   +GSS
Sbjct: 123 -VQNERENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKVAQLHHRNLNFYVGSS 182

Query: 182 SSSYSSMPFNGAGEETIP--FNILANGPPPPTNAYLPHAFD 215
           S+  +    +G    T    F+   N    PT   LP  F+
Sbjct: 183 SNVAAPAAVSGGNISTNHGFFDQNGNSTSAPT---LPFGFN 216

[Close]

BLAST of MC01g1541 vs. ExPASy Swiss-Prot
Match: O80807 (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.4e-20
Identity = 61/197 (30.96%), Postives = 110/197 (55.84%), Query Frame = 0


Query: 2   KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 61
           K+T GR+K+E+ K+  E +  +TFSKR++G++KKASE  TLC A++ ++VFSPAGK FSF
Sbjct: 3   KKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFSF 62

Query: 62  AHPSIESVANKFINETPQPNDNTHPLVEAHRRVRINELNQQHNQLLSQLEAEKEKGKALE 121
            HP+++ + + F       ++NT+ L E++ ++ +  LN+ + ++  + E EKE+     
Sbjct: 63  GHPNVDVLLDHF-RGCVVGHNNTN-LDESYTKLHVQMLNKSYTEV--KAEVEKEQKNKQS 122

Query: 122 KMKKVRGNSNGRGWWETPTEEMGMEE-------LQQVDASLGDLYTNVCHQLRERGVIGS 181
           + +  R N N   WW     E+ + +       L+ +   + +    + HQ      +GS
Sbjct: 123 RAQNERENENAEEWWSKSPLELNLSQSTCMIRVLKDLKKIVDEKAIQLIHQTNPNFYVGS 182

Query: 182 SSSSYSSMPFNGAGEET 192
           SS++ +    +G    T
Sbjct: 183 SSNAAAPATVSGGNIST 195

[Close]

BLAST of MC01g1541 vs. NCBI nr
Match: XP_022146674.1 (agamous-like MADS-box protein AGL61 [Momordica charantia])

HSP 1 Score: 427 bits (1097), Expect = 1.77e-150
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   KKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFS 60
           KKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFS
Sbjct: 4   KKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFS 63

Query: 61  FAHPSIESVANKFINETPQPNDNTHPLVEAHRRVRINELNQQHNQLLSQLEAEKEKGKAL 120
           FAHPSIESVANKFINETPQPNDNTHPLVEAHRRVRINELNQQHNQLLSQLEAEKEKGKAL
Sbjct: 64  FAHPSIESVANKFINETPQPNDNTHPLVEAHRRVRINELNQQHNQLLSQLEAEKEKGKAL 123

Query: 121 EKMKKVRGNSNGRGWWETPTEEMGMEELQQVDASLGDLYTNVCHQLRERGVIGSSSSSYS 180
           EKMKKVRGNSNGRGWWETPTEEMGMEELQQVDASLGDLYTNVCHQLRERGVIGSSSSSYS
Sbjct: 124 EKMKKVRGNSNGRGWWETPTEEMGMEELQQVDASLGDLYTNVCHQLRERGVIGSSSSSYS 183

Query: 181 SMPFNGAGEETIPFNILANGPPPPTNAYLPHAFDYG 216
           SMPFNGAGEETIPFNILANGPPPPTNAYLPHAFDYG
Sbjct: 184 SMPFNGAGEETIPFNILANGPPPPTNAYLPHAFDYG 219

[Close]

BLAST of MC01g1541 vs. NCBI nr
Match: KAG6594479.1 (Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026476.1 Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 338 bits (866), Expect = 5.87e-115
Identity = 182/223 (81.61%), Postives = 199/223 (89.24%), Query Frame = 0


Query: 2   KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 61
           KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF
Sbjct: 9   KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 68

Query: 62  AHPSIESVANKFINETPQPNDNTHPLVEAHRRVRINELNQQHNQLLSQLEAEKEKGKALE 121
           AHP IESVANKF++E PQPNDNTHPLVEAHRR+RINELNQQHNQLLSQL+AEKEKGKALE
Sbjct: 69  AHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAEKEKGKALE 128

Query: 122 KMKKVRGNSNGRGWWETPTEEMGMEELQQVDASLGDLYTNVCHQLRERGVIGSSSSSYSS 181
           K+KKVRGN NGRGWWE+PTEE+G+EELQQVD SLG+LY NVCH+L+ERGV+GSSS S S+
Sbjct: 129 KLKKVRGN-NGRGWWESPTEELGIEELQQVDGSLGELYQNVCHELKERGVLGSSSYSASN 188

Query: 182 -MPFNGAG-EETIPFNILANGPP----PPTNAYLP--HAFDYG 216
            + F+ AG EETIPFNILA G      P +  YLP  + FDYG
Sbjct: 189 TLGFDHAGREETIPFNILATGAAAAAGPSSATYLPDPNPFDYG 230

[Close]

BLAST of MC01g1541 vs. NCBI nr
Match: XP_023518350.1 (agamous-like MADS-box protein AGL62 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 336 bits (862), Expect = 2.47e-114
Identity = 181/224 (80.80%), Postives = 199/224 (88.84%), Query Frame = 0


Query: 2   KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 61
           KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF
Sbjct: 9   KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 68

Query: 62  AHPSIESVANKFINETPQPNDNTHPLVEAHRRVRINELNQQHNQLLSQLEAEKEKGKALE 121
           AHP IESVANKF++E PQPNDNTHPLVEAHRR+RINELNQQHNQLLSQL+AEKEKGKALE
Sbjct: 69  AHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAEKEKGKALE 128

Query: 122 KMKKVRGNSNGRGWWETPTEEMGMEELQQVDASLGDLYTNVCHQLRERGVIGSSSSSYSS 181
           K+KKVRGN NGRGWWE+PTEE+G++ELQQVD SLG+LY NVCH+L+ERGV+GSSS S S+
Sbjct: 129 KLKKVRGN-NGRGWWESPTEELGIDELQQVDGSLGELYQNVCHELKERGVLGSSSYSASN 188

Query: 182 -MPFNGAG-EETIPFNILANGPP-----PPTNAYLP--HAFDYG 216
            + F+ AG EETIPFNILA G       P +  YLP  + FDYG
Sbjct: 189 TLGFDHAGREETIPFNILATGAAAAAAGPSSATYLPDPNPFDYG 231

[Close]

BLAST of MC01g1541 vs. NCBI nr
Match: XP_022926768.1 (agamous-like MADS-box protein AGL61 [Cucurbita moschata])

HSP 1 Score: 337 bits (864), Expect = 5.59e-114
Identity = 182/225 (80.89%), Postives = 199/225 (88.44%), Query Frame = 0


Query: 2   KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 61
           KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF
Sbjct: 52  KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 111

Query: 62  AHPSIESVANKFINETPQPNDNTHPLVEAHRRVRINELNQQHNQLLSQLEAEKEKGKALE 121
           AHP IESVANKF++E PQPNDNTHPLVEAHRR+RINELNQQHNQLLSQL+AEKEKGKALE
Sbjct: 112 AHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAEKEKGKALE 171

Query: 122 KMKKVRGNSNGRGWWETPTEEMGMEELQQVDASLGDLYTNVCHQLRERGVIGSSSSSYSS 181
           K+KKVRGN NGRGWWE+PTEE+G+EELQQVD SLG+LY NVCH+L+ERGV+GSSS S S+
Sbjct: 172 KLKKVRGN-NGRGWWESPTEELGIEELQQVDGSLGELYQNVCHELKERGVLGSSSYSASN 231

Query: 182 -MPFNGAG-EETIPFNILANGPP------PPTNAYLP--HAFDYG 216
            + F+ AG EETIPFNILA G        P +  YLP  + FDYG
Sbjct: 232 TLGFDHAGREETIPFNILATGAAAAAAAGPSSATYLPDPNPFDYG 275

[Close]

BLAST of MC01g1541 vs. NCBI nr
Match: XP_023003356.1 (agamous-like MADS-box protein AGL62 [Cucurbita maxima])

HSP 1 Score: 335 bits (858), Expect = 1.04e-113
Identity = 181/225 (80.44%), Postives = 198/225 (88.00%), Query Frame = 0


Query: 2   KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 61
           KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF
Sbjct: 9   KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 68

Query: 62  AHPSIESVANKFINETPQPNDNTHPLVEAHRRVRINELNQQHNQLLSQLEAEKEKGKALE 121
           AHP IESVANKF++E PQPNDNTHPLVEAHRR+RINELNQQHNQLLSQL+AEKEKGKALE
Sbjct: 69  AHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAEKEKGKALE 128

Query: 122 KMKKVRGNSNGRGWWETPTEEMGMEELQQVDASLGDLYTNVCHQLRERGVIGSSSSSYSS 181
           K+KKVRGN NGRGWWE+PTEE+ +EELQQVD SLG+LY NVCH+L+ERGV+GSSS S S+
Sbjct: 129 KLKKVRGN-NGRGWWESPTEELAIEELQQVDGSLGELYQNVCHELKERGVLGSSSYSASN 188

Query: 182 -MPFNGAG-EETIPFNILANGPP------PPTNAYLP--HAFDYG 216
            + F+ AG EETIPFNILA G        P +  YLP  + FDYG
Sbjct: 189 TLGFDHAGREETIPFNILATGAAAASAAGPSSATYLPDPNPFDYG 232

[Close]

BLAST of MC01g1541 vs. ExPASy TrEMBL
Match: A0A6J1CYR8 (agamous-like MADS-box protein AGL61 OS=Momordica charantia OX=3673 GN=LOC111015822 PE=4 SV=1)

HSP 1 Score: 427 bits (1097), Expect = 8.58e-151
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   KKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFS 60
           KKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFS
Sbjct: 4   KKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFS 63

Query: 61  FAHPSIESVANKFINETPQPNDNTHPLVEAHRRVRINELNQQHNQLLSQLEAEKEKGKAL 120
           FAHPSIESVANKFINETPQPNDNTHPLVEAHRRVRINELNQQHNQLLSQLEAEKEKGKAL
Sbjct: 64  FAHPSIESVANKFINETPQPNDNTHPLVEAHRRVRINELNQQHNQLLSQLEAEKEKGKAL 123

Query: 121 EKMKKVRGNSNGRGWWETPTEEMGMEELQQVDASLGDLYTNVCHQLRERGVIGSSSSSYS 180
           EKMKKVRGNSNGRGWWETPTEEMGMEELQQVDASLGDLYTNVCHQLRERGVIGSSSSSYS
Sbjct: 124 EKMKKVRGNSNGRGWWETPTEEMGMEELQQVDASLGDLYTNVCHQLRERGVIGSSSSSYS 183

Query: 181 SMPFNGAGEETIPFNILANGPPPPTNAYLPHAFDYG 216
           SMPFNGAGEETIPFNILANGPPPPTNAYLPHAFDYG
Sbjct: 184 SMPFNGAGEETIPFNILANGPPPPTNAYLPHAFDYG 219

[Close]

BLAST of MC01g1541 vs. ExPASy TrEMBL
Match: A0A6J1EJ54 (agamous-like MADS-box protein AGL61 OS=Cucurbita moschata OX=3662 GN=LOC111433790 PE=4 SV=1)

HSP 1 Score: 337 bits (864), Expect = 2.71e-114
Identity = 182/225 (80.89%), Postives = 199/225 (88.44%), Query Frame = 0


Query: 2   KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 61
           KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF
Sbjct: 52  KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 111

Query: 62  AHPSIESVANKFINETPQPNDNTHPLVEAHRRVRINELNQQHNQLLSQLEAEKEKGKALE 121
           AHP IESVANKF++E PQPNDNTHPLVEAHRR+RINELNQQHNQLLSQL+AEKEKGKALE
Sbjct: 112 AHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAEKEKGKALE 171

Query: 122 KMKKVRGNSNGRGWWETPTEEMGMEELQQVDASLGDLYTNVCHQLRERGVIGSSSSSYSS 181
           K+KKVRGN NGRGWWE+PTEE+G+EELQQVD SLG+LY NVCH+L+ERGV+GSSS S S+
Sbjct: 172 KLKKVRGN-NGRGWWESPTEELGIEELQQVDGSLGELYQNVCHELKERGVLGSSSYSASN 231

Query: 182 -MPFNGAG-EETIPFNILANGPP------PPTNAYLP--HAFDYG 216
            + F+ AG EETIPFNILA G        P +  YLP  + FDYG
Sbjct: 232 TLGFDHAGREETIPFNILATGAAAAAAAGPSSATYLPDPNPFDYG 275

[Close]

BLAST of MC01g1541 vs. ExPASy TrEMBL
Match: A0A6J1KP08 (agamous-like MADS-box protein AGL62 OS=Cucurbita maxima OX=3661 GN=LOC111496989 PE=4 SV=1)

HSP 1 Score: 335 bits (858), Expect = 5.03e-114
Identity = 181/225 (80.44%), Postives = 198/225 (88.00%), Query Frame = 0


Query: 2   KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 61
           KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF
Sbjct: 9   KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 68

Query: 62  AHPSIESVANKFINETPQPNDNTHPLVEAHRRVRINELNQQHNQLLSQLEAEKEKGKALE 121
           AHP IESVANKF++E PQPNDNTHPLVEAHRR+RINELNQQHNQLLSQL+AEKEKGKALE
Sbjct: 69  AHPCIESVANKFLDENPQPNDNTHPLVEAHRRLRINELNQQHNQLLSQLDAEKEKGKALE 128

Query: 122 KMKKVRGNSNGRGWWETPTEEMGMEELQQVDASLGDLYTNVCHQLRERGVIGSSSSSYSS 181
           K+KKVRGN NGRGWWE+PTEE+ +EELQQVD SLG+LY NVCH+L+ERGV+GSSS S S+
Sbjct: 129 KLKKVRGN-NGRGWWESPTEELAIEELQQVDGSLGELYQNVCHELKERGVLGSSSYSASN 188

Query: 182 -MPFNGAG-EETIPFNILANGPP------PPTNAYLP--HAFDYG 216
            + F+ AG EETIPFNILA G        P +  YLP  + FDYG
Sbjct: 189 TLGFDHAGREETIPFNILATGAAAASAAGPSSATYLPDPNPFDYG 232

[Close]

BLAST of MC01g1541 vs. ExPASy TrEMBL
Match: A0A0A0KNT7 (MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G522745 PE=4 SV=1)

HSP 1 Score: 296 bits (757), Expect = 4.95e-98
Identity = 170/263 (64.64%), Postives = 193/263 (73.38%), Query Frame = 0


Query: 1   KKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFS 60
           KKQTKGRQKIEMKKI NEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFS
Sbjct: 14  KKQTKGRQKIEMKKIVNEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFS 73

Query: 61  FAHPSIESVANKFIN----------------ETPQPNDNT------------HPLVEAHR 120
           FAHP IE++ANKF+N                ++   N+N             HPLVEAHR
Sbjct: 74  FAHPCIETIANKFLNGNKNNKGNNDDNNNNGDSSSSNNNNNNSNNNNNSNAAHPLVEAHR 133

Query: 121 RVRINELNQQHNQLLSQLEAEKEKGKALEKMKKVRGNSNGRGWWETPTEEMGMEELQQVD 180
           RVRINELNQQHNQLLSQL+AEKEKGKALEK+K+VRGN  GRGWWETPTEE+G+EELQ+VD
Sbjct: 134 RVRINELNQQHNQLLSQLDAEKEKGKALEKLKRVRGN--GRGWWETPTEELGIEELQEVD 193

Query: 181 ASLGDLYTNVCHQLRERGVIG-------SSSSSYSSMPF----NGAGEETIPFNILANG- 216
           AS G++Y+NVCHQL++RGVIG       +++ + SSM F    +  GEETIPFNILA   
Sbjct: 194 ASFGEIYSNVCHQLKQRGVIGCCSYNNYNNNMNNSSMGFPLTNDQLGEETIPFNILAGNV 253

[Close]

BLAST of MC01g1541 vs. ExPASy TrEMBL
Match: A0A7N2R569 (MADS-box domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 259 bits (663), Expect = 8.29e-85
Identity = 137/217 (63.13%), Postives = 171/217 (78.80%), Query Frame = 0


Query: 2   KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 61
           K+TKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASEL TLCGAEVGVV+FSPAGKPF+F
Sbjct: 4   KKTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELVTLCGAEVGVVIFSPAGKPFTF 63

Query: 62  AHPSIESVANKFINETPQPN--DNTHPLVEAHRRVRINELNQQHNQLLSQLEAEKEKGKA 121
            HPS+ESVAN+F+ + P P   DNTHPLVEAHRRVRINELNQQ+N+LLS LEAEK++GKA
Sbjct: 64  GHPSVESVANRFLRQNPPPGQGDNTHPLVEAHRRVRINELNQQYNELLSLLEAEKDQGKA 123

Query: 122 LEKMKKVRGNSNGRGWWETPTEEMGMEELQQVDASLGDLYTNVCHQLRERGVIGSSSSSY 181
           L+K+ K RGN   +GWWE PTEE+G +EL+Q++A L +L+ N+C+ ++E+   G +  S 
Sbjct: 124 LQKLTKARGN---KGWWEVPTEELGYQELKQMNAQLEELHKNLCNHMKEKAFAGGALPSS 183

Query: 182 SSMPFNGAGEETIPFNILANGPPPPTNAYLPHAFDYG 216
           S+     + + +IPF   A+   PP    LP ++ YG
Sbjct: 184 STYFPGNSSQGSIPFIPNASDADPP----LPPSYGYG 213

[Close]

BLAST of MC01g1541 vs. TAIR 10
Match: AT5G60440.1 (AGAMOUS-like 62 )

HSP 1 Score: 143.3 bits (360), Expect = 2.3e-34
Identity = 79/160 (49.38%), Postives = 108/160 (67.50%), Query Frame = 0


Query: 2   KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 61
           K++KGRQKIEM K++NE +  +TFSKRRSG++KKASEL TLCGAEV +VVFSP  K FSF
Sbjct: 3   KKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFSF 62

Query: 62  AHPSIESVANKFINETPQP--NDNTHPLVEAHRRVRINELNQQHNQLLSQLEAEKEKGKA 121
            HP+++SV ++FIN  P P    N   L E  R   + +LN    Q+LSQLE EK+K   
Sbjct: 63  GHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKK--- 122

Query: 122 LEKMKKVRGNSNGRG-WWETPTEEMGMEELQQVDASLGDL 159
            +++KK+R  +   G WWE P EE+ + +L+    +L +L
Sbjct: 123 YDELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENL 159

[Close]

BLAST of MC01g1541 vs. TAIR 10
Match: AT2G24840.1 (AGAMOUS-like 61 )

HSP 1 Score: 141.7 bits (356), Expect = 6.7e-34
Identity = 85/208 (40.87%), Postives = 124/208 (59.62%), Query Frame = 0


Query: 1   KKQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFS 60
           KK++ GRQKI M KI+ E  R +TFSKRR+G++KKASEL TLCGAE+G++VFSPA KPFS
Sbjct: 58  KKESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFS 117

Query: 61  FAHPSIESVANKFINETPQPNDNTHPLVEAHRRVRINELNQQHNQLLSQLEAEKEKGKAL 120
           F HPS+ESV +++++        +  L  +       ELN Q   +LS++E EK+KG+A+
Sbjct: 118 FGHPSVESVLDRYVSRNNMSLAQSQQLQGS--PAASCELNMQLTHILSEVEEEKKKGQAM 177

Query: 121 EKMKKVRGNSNGRGWWETPTEEMGMEELQQVDASLGDLYTNVCHQLRERGVIGSSSSSYS 180
           E+M+K     +   WWE P EEM M +LQ++  +L         +LR+  V   +S + +
Sbjct: 178 EEMRKESVRRSMINWWEKPVEEMNMVQLQEMKYAL--------EELRKTVVTNMASFNEA 237

Query: 181 SMPFNGAGEETIPFNILANGPPPPTNAY 209
                G  +  +      N P  P+N Y
Sbjct: 238 KDDVFGFLDNKVTVPPYVNMPSGPSNIY 255

[Close]

BLAST of MC01g1541 vs. TAIR 10
Match: AT3G04100.1 (AGAMOUS-like 57 )

HSP 1 Score: 126.3 bits (316), Expect = 2.9e-29
Identity = 68/168 (40.48%), Postives = 111/168 (66.07%), Query Frame = 0


Query: 2   KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 61
           ++TKG+QKIEMKK+EN  DR+ITFSKR++GI+KK +EL  +C  EV  ++FS   KP++F
Sbjct: 10  RKTKGKQKIEMKKVENYGDRMITFSKRKTGIFKKMNELVAMCDVEVAFLIFSQPKKPYTF 69

Query: 62  AHPSIESVANKFIN---ETPQPNDNTHPLVEAHRRVRINELNQQHNQLLSQLEAEKEKGK 121
           AHPS++ VA++  N   + P   D+T PLVEA+++ R+++L ++   L  +L  + EK K
Sbjct: 70  AHPSMKKVADRLKNPSRQEPLERDDTRPLVEAYKKRRLHDLVKKMEALEEELAMDLEKLK 129

Query: 122 ALEKMKKVRGNSNGRGWWETPTEEMGMEELQQVDASLGDLYTNVCHQL 167
            L++ +  +     + WW  P+E +  +ELQQ   ++ +L  N+C  +
Sbjct: 130 LLKESRNEK--KLDKMWWNFPSEGLSAKELQQRYQAMLELRDNLCDNM 175

[Close]

BLAST of MC01g1541 vs. TAIR 10
Match: AT4G36590.1 (MADS-box transcription factor family protein )

HSP 1 Score: 115.9 bits (289), Expect = 4.0e-26
Identity = 69/183 (37.70%), Postives = 106/183 (57.92%), Query Frame = 0


Query: 2   KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 61
           + TKGRQKIEMKK+ENE +  +TFSKRR G++KKASEL TL GAE+ ++VFSP GK FSF
Sbjct: 3   RSTKGRQKIEMKKMENESNLQVTFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKVFSF 62

Query: 62  AHPSIESVANKFINETPQP-----NDNTHPLVEAHRRVRINELNQQHNQLLSQLEAEKEK 121
            HPS++ + ++F N           +N   LVE      I  LN    ++L+  E EK+K
Sbjct: 63  GHPSVQELIHRFSNPNHNSAIVHHQNNNLQLVETRPDRNIQYLNNILTEVLANQEKEKQK 122

Query: 122 GKALEKMKKVRGNSNGRGWWETPTEEMGMEELQQVDASLGDLYTNVCHQLRERGVIGSSS 180
              L+ +K+ R       W+E   +++ M E  Q+ ++L D+   +  ++ +   +  S 
Sbjct: 123 RMVLDLLKESREQVG--NWYEKDVKDLDMNETNQLISALQDVKKKLVREMSQYSQVNVSQ 182

[Close]

BLAST of MC01g1541 vs. TAIR 10
Match: AT1G28460.1 (AGAMOUS-like 59 )

HSP 1 Score: 113.2 bits (282), Expect = 2.6e-25
Identity = 59/168 (35.12%), Postives = 103/168 (61.31%), Query Frame = 0


Query: 2   KQTKGRQKIEMKKIENEDDRLITFSKRRSGIYKKASELATLCGAEVGVVVFSPAGKPFSF 61
           K+TKG+QKI +KKIE ++ R +TFSKR +GIY K SEL+ LCG EV  + +S +GKP++F
Sbjct: 4   KKTKGKQKINIKKIEKDEGRSVTFSKRLNGIYTKISELSILCGVEVAFIGYSCSGKPYTF 63

Query: 62  AHPSIESVANKFINETPQPNDNTHPLVEAHRRVRINELNQQHNQLLSQLEAEKEKGKALE 121
             PS ++VA +F+N     + ++  ++ AH++ +I EL +++N+L+ +L+ ++ K K   
Sbjct: 64  GSPSFQAVAERFLNGDASSSSSSSLVMNAHKQAKIQELCKKYNRLVEELKVDEVKVKKAA 123

Query: 122 KMKKVRGNSNGRGWWETPTEEMGMEELQQVDASLGDLYTNVCHQLRER 170
            + + R  +    W   P +    E+ +++     +LY  +C Q   R
Sbjct: 124 ALAETRVVNKDVWWKVDPNDVKDHEKAKKMMEKYQELYDKLCEQAASR 171

The following BLAST results are available for this feature:

BLAST of MC01g1541 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKK2	3.3e-33	49.38	Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=...	[more]
Q4PSU4	9.5e-33	40.87	Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=...	[more]
O64703	3.7e-21	41.10	Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=...	[more]
Q9LMM8	6.4e-21	32.13	Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=...	[more]
O80807	2.4e-20	30.96	Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=...	[more]

BLAST of MC01g1541 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146674.1	1.77e-150	100.00	agamous-like MADS-box protein AGL61 [Momordica charantia]	[more]
KAG6594479.1	5.87e-115	81.61	Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_023518350.1	2.47e-114	80.80	agamous-like MADS-box protein AGL62 [Cucurbita pepo subsp. pepo]	[more]
XP_022926768.1	5.59e-114	80.89	agamous-like MADS-box protein AGL61 [Cucurbita moschata]	[more]
XP_023003356.1	1.04e-113	80.44	agamous-like MADS-box protein AGL62 [Cucurbita maxima]	[more]

BLAST of MC01g1541 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CYR8	8.58e-151	100.00	agamous-like MADS-box protein AGL61 OS=Momordica charantia OX=3673 GN=LOC1110158...	[more]
A0A6J1EJ54	2.71e-114	80.89	agamous-like MADS-box protein AGL61 OS=Cucurbita moschata OX=3662 GN=LOC11143379...	[more]
A0A6J1KP08	5.03e-114	80.44	agamous-like MADS-box protein AGL62 OS=Cucurbita maxima OX=3661 GN=LOC111496989 ...	[more]
A0A0A0KNT7	4.95e-98	64.64	MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G522745 PE...	[more]
A0A7N2R569	8.29e-85	63.13	MADS-box domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of MC01g1541 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60440.1	2.3e-34	49.38	AGAMOUS-like 62	[more]
AT2G24840.1	6.7e-34	40.87	AGAMOUS-like 61	[more]
AT3G04100.1	2.9e-29	40.48	AGAMOUS-like 57	[more]
AT4G36590.1	4.0e-26	37.70	MADS-box transcription factor family protein	[more]
AT1G28460.1	2.6e-25	35.12	AGAMOUS-like 59	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 93..123
None	No IPR available	GENE3D	6.10.140.920		coord: 85..167 e-value: 1.3E-7 score: 33.8
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 4..182
None	No IPR available	PANTHER	PTHR11945:SF648	BOX PROTEIN, PUTATIVE-RELATED	coord: 4..182
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 27..42 score: 61.67 coord: 42..63 score: 43.8 coord: 7..27 score: 51.0
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 5..64 e-value: 1.2E-30 score: 117.8
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 14..61 e-value: 1.0E-23 score: 82.6
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 5..65 score: 25.819454
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 17..84 e-value: 3.1E-24 score: 86.6
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 6..81
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 6..75 e-value: 3.86974E-35 score: 117.653

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g1541.1	MC01g1541.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding