MC01g1540 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g1540
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	mitochondrial inner membrane protease subunit 1
Location	MC01: 19636524 .. 19638319 (+)
RNA-Seq Expression	MC01g1540
Synteny	MC01g1540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCTGCGGTGCTTGGGTCTGTGATCACTGTTCAGTAATGTAAAAACCGAGAGTCTGGTGAAAGAGAGGGAAATGGCGGGACTGAGAAGACTGGCGCAATTGAAACCGATAGCCGTAGAAGCGGCGGCCGGAACAGTTTTCGCCGCGAAGTTCCTGTGCGGCCTTCATGTCGCCAACACTTACGTCTGCACCGCCGCTCTCGTAAGTTGAAACTCTCGTCTCTGAAATCCATGTACATTTTTGAGGGCTCGGTTGACCGTCCTGTTCCTGTATGTGTAGACCTACGGTCCCAGCATGCTCCCTACTCTGAATCTAACCGGCGATTTCATTTTGGCCGAGCGAGTCTCCACTCGCTTTGGCAGAGTCGGCGTCGGAGACATTGTCCTCGTGAGGTCCCCTGAGAACCCTCGGAAAGTGATGGCGAAGCGCTTGATGGGCATGGAGGGCGACTCTGTTACCTATGTTGTGGATCCGAAGAACAGTGATAGGTGCGAAACTGTTGTGGTATGGCTGCTTAGAATTGCTCTTCCGTGCTTAATTTAAAAAAAAAATTGCGTGTTTTTTAATTGTTGTGCTAAGAATTGTGCCCTACATTTGGCTACTGTAATTTCAATTTCATTCTCATATTGCTTTAGAATGTGAATGTGTGTGTAGGTTCCCAAGGGCCATGTTTGGATAGAGGGAGATAATATTTATGATTCAAATGATTCAAGACGTTTTGGGGCTGTCCCATATGGTCTTCTGCAAGGGAAAATATTCTGGAGGGTGAGTAAGATTGATTTCCTTCTTCCCTCATTTGGTTTTTTCTTTAAGAAGGATAAATGTTCTATTTCCTTTTCATCCAGCAAAGTGGTCGTTGGTCCAGTAATAATATTCAATTTGTATGGTTCTTGGTTCTGTTTGCATTAGTTTATGAGGTGATAATGAAGTTGAAAGTGTAGAATGTAGTATCTTGGATAAGGAATTTAAGATAATGGTGAGTAATAACTTTATCATTATTCATCTATATCTTGTTTACCATGGTAGATATTCTCTCAACTGGTTGGTTACAACTTAGGCTTGTTTGGGAAACTGCTGGCAACAATTTTCTGCTTTTAGAAACTTTGATAGAATGGCTTGTAAAAGTTAAAATTATTCACTTGAAATCTGTATTCGCAGATCAATAATTTTGCAAAAAAACAATTTGTTTTGCAGTAACTTGTGAAAAAAAAAAACTAAAAAGAATAAGAGAAAACTAGTACTTAAAAGGGCCAGAGACTAAAAATTGCTGTAACTCATACCAAATAGTCATAGATGAAGCCCTACATCTAGGTGAAATTATGAAAGAAAACTTAGTTTTGTGTATTTACTAATCGCACTTTTATGGATTTATGATTTAAAATTTGTAAGTTACAACTTGAGCTAAGTATTCTCTGTTCATTTTAGATTTTGGTATCTGATTTTGGTTGTAGTTTGTAAGTATGTAATTGCTTTTTTTGGTCTTAAAATAGCTTATAATATCTTTCTTCTGTGTAGATATGGCCACCTAAAAGTTTTGGACCGTTGGAGAAGAGAAAATCGAATGAGACTGTTTTGTGAGGTAAGCTCAAGTATTTATTAGGTAGAAATTCAACCTTTTGGTCCATGGATGCCTTCATGTCAGTATGTCACTTGTTATATTTTTCATTGTCATTTGGGAATTATTTATTATGATTTATTTGATGACATTCTCATTTTGTGCTTCTTTTTAATTCTATTATTTGAACAGTTTCTGATTGAAAAGAATCACTTTTGAACATTTGGTTATATGGACACTAG

mRNA sequence

CGCTGCGGTGCTTGGGTCTGTGATCACTGTTCAGTAATGTAAAAACCGAGAGTCTGGTGAAAGAGAGGGAAATGGCGGGACTGAGAAGACTGGCGCAATTGAAACCGATAGCCGTAGAAGCGGCGGCCGGAACAGTTTTCGCCGCGAAGTTCCTGTGCGGCCTTCATGTCGCCAACACTTACGTCTGCACCGCCGCTCTCACCTACGGTCCCAGCATGCTCCCTACTCTGAATCTAACCGGCGATTTCATTTTGGCCGAGCGAGTCTCCACTCGCTTTGGCAGAGTCGGCGTCGGAGACATTGTCCTCGTGAGGTCCCCTGAGAACCCTCGGAAAGTGATGGCGAAGCGCTTGATGGGCATGGAGGGCGACTCTGTTACCTATGTTGTGGATCCGAAGAACAGTGATAGGTGCGAAACTGTTGTGGTTCCCAAGGGCCATGTTTGGATAGAGGGAGATAATATTTATGATTCAAATGATTCAAGACGTTTTGGGGCTGTCCCATATGGTCTTCTGCAAGGGAAAATATTCTGGAGGATATGGCCACCTAAAAGTTTTGGACCGTTGGAGAAGAGAAAATCGAATGAGACTGTTTTGTGAGGTAAGCTCAAGTATTTATTAGGTAGAAATTCAACCTTTTGGTCCATGGATGCCTTCATGTCAGTATGTCACTTGTTATATTTTTCATTGTCATTTGGGAATTATTTATTATGATTTATTTGATGACATTCTCATTTTGTGCTTCTTTTTAATTCTATTATTTGAACAGTTTCTGATTGAAAAGAATCACTTTTGAACATTTGGTTATATGGACACTAG

Coding sequence (CDS)

ATGGCGGGACTGAGAAGACTGGCGCAATTGAAACCGATAGCCGTAGAAGCGGCGGCCGGAACAGTTTTCGCCGCGAAGTTCCTGTGCGGCCTTCATGTCGCCAACACTTACGTCTGCACCGCCGCTCTCACCTACGGTCCCAGCATGCTCCCTACTCTGAATCTAACCGGCGATTTCATTTTGGCCGAGCGAGTCTCCACTCGCTTTGGCAGAGTCGGCGTCGGAGACATTGTCCTCGTGAGGTCCCCTGAGAACCCTCGGAAAGTGATGGCGAAGCGCTTGATGGGCATGGAGGGCGACTCTGTTACCTATGTTGTGGATCCGAAGAACAGTGATAGGTGCGAAACTGTTGTGGTTCCCAAGGGCCATGTTTGGATAGAGGGAGATAATATTTATGATTCAAATGATTCAAGACGTTTTGGGGCTGTCCCATATGGTCTTCTGCAAGGGAAAATATTCTGGAGGATATGGCCACCTAAAAGTTTTGGACCGTTGGAGAAGAGAAAATCGAATGAGACTGTTTTGTGA

Protein sequence

MAGLRRLAQLKPIAVEAAAGTVFAAKFLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFILAERVSTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNSDRCETVVVPKGHVWIEGDNIYDSNDSRRFGAVPYGLLQGKIFWRIWPPKSFGPLEKRKSNETVL

Homology

[Close]

BLAST of MC01g1540 vs. ExPASy Swiss-Prot
Match: Q96LU5 (Mitochondrial inner membrane protease subunit 1 OS=Homo sapiens OX=9606 GN=IMMP1L PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 8.2e-27
Identity = 57/141 (40.43%), Postives = 87/141 (61.70%), Query Frame = 0


Query: 23  FAAKFLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFILAERVSTRFGRVGVGDIVLVRS 82
           +  ++ C  H A  YV    +  GPSM PT+    D + AE +S  F  +  GDIV+ +S
Sbjct: 15  YTIQYGCIAHCAFEYVGGVVMCSGPSMEPTIQ-NSDIVFAENLSRHFYGIQRGDIVIAKS 74

Query: 83  PENPRKVMAKRLMGMEGDSVTYVVDPKNSDRCETVVVPKGHVWIEGDNIYDSNDSRRFGA 142
           P +P+  + KR++G+EGD +     P +  +  +  VP GHVW+EGDN+ +S DSR +G 
Sbjct: 75  PSDPKSNICKRVIGLEGDKI-LTTSPSDFFKSHS-YVPMGHVWLEGDNLQNSTDSRCYGP 134

Query: 143 VPYGLLQGKIFWRIWPPKSFG 164
           +PYGL++G+IF++IWP   FG
Sbjct: 135 IPYGLIRGRIFFKIWPLSDFG 152

[Close]

BLAST of MC01g1540 vs. ExPASy Swiss-Prot
Match: Q9CQU8 (Mitochondrial inner membrane protease subunit 1 OS=Mus musculus OX=10090 GN=Immp1l PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.4e-26
Identity = 57/141 (40.43%), Postives = 87/141 (61.70%), Query Frame = 0


Query: 23  FAAKFLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFILAERVSTRFGRVGVGDIVLVRS 82
           +  ++ C  H A  YV    +  GPSM PT+    D + AE +S  F  +  GDIV+ +S
Sbjct: 15  YTIQYGCIAHCAFEYVGGVVMCSGPSMEPTIQ-NSDIVFAENLSRHFYGIQRGDIVIAKS 74

Query: 83  PENPRKVMAKRLMGMEGDSVTYVVDPKNSDRCETVVVPKGHVWIEGDNIYDSNDSRRFGA 142
           P +P+  + KR++G+EGD +     P +  +  +  VP GHVW+EGDN+ +S DSR +G 
Sbjct: 75  PSDPKSNICKRVIGLEGDKI-LSTSPSDVFKSRS-YVPTGHVWLEGDNLQNSTDSRYYGP 134

Query: 143 VPYGLLQGKIFWRIWPPKSFG 164
           +PYGL++G+IF++IWP   FG
Sbjct: 135 IPYGLIRGRIFFKIWPFSDFG 152

[Close]

BLAST of MC01g1540 vs. ExPASy Swiss-Prot
Match: Q28I39 (Mitochondrial inner membrane protease subunit 1 OS=Xenopus tropicalis OX=8364 GN=immp1l PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.4e-26
Identity = 59/145 (40.69%), Postives = 90/145 (62.07%), Query Frame = 0


Query: 23  FAAKFLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFILAERVSTRFGRVGVGDIVLVRS 82
           +  ++ C  H A  Y+    +  GPSM PT+    D +L + +S  F  +  GDI++ +S
Sbjct: 15  YTIQYGCIAHCAFEYIGEVVICSGPSMEPTIR-NYDVLLCDNLSRHFFSIHKGDIIVAKS 74

Query: 83  PENPRKVMAKRLMGMEGDSVTYVVDPKNSDRCETVVVPKGHVWIEGDNIYDSNDSRRFGA 142
           P+ P   + KR++G+EGD V  +  P    +  T  VPKGHVW+EGDN+ +S DSR +G 
Sbjct: 75  PDKPSVNICKRVIGLEGDKVC-MSSPSALLKRHT-YVPKGHVWLEGDNLDNSTDSRSYGP 134

Query: 143 VPYGLLQGKIFWRIWPPKSFGPLEK 168
           VPY L++G+I  R+WP +SFGPL++
Sbjct: 135 VPYALIRGRICLRVWPLESFGPLKE 156

[Close]

BLAST of MC01g1540 vs. ExPASy Swiss-Prot
Match: O74800 (Mitochondrial inner membrane protease subunit 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=imp1 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 5.3e-26
Identity = 65/159 (40.88%), Postives = 95/159 (59.75%), Query Frame = 0


Query: 1   MAGLRRLAQLKPIAVEAAAGTVFAAKFLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60
           MAG+ R+    PIAV   A  V         H  + Y+    +T GPSM+PTLN  G+F+
Sbjct: 1   MAGMFRI----PIAVVQIAAFV---------HQIHEYLFQVQMTSGPSMMPTLNSGGEFV 60

Query: 61  LAERVSTRFGR-VGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNSDRCETVVV 120
           L +++  RF R   VGD+V+   P + ++ + KR++GM GD  T  VDP +S++   + +
Sbjct: 61  LLDKLHGRFARSCSVGDVVVSAKPSDSKQHVCKRIIGMPGD--TIYVDPTSSNK--KITI 120

Query: 121 PKGHVWIEGDNIYDSNDSRRFGAVPYGLLQGKIFWRIWP 159
           P GHVW+ GDNI  S DSR +G VP GL++ K+  R+WP
Sbjct: 121 PLGHVWLAGDNIAHSLDSRNYGPVPMGLIKAKVIARVWP 142

[Close]

BLAST of MC01g1540 vs. ExPASy Swiss-Prot
Match: P28627 (Mitochondrial inner membrane protease subunit 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=IMP1 PE=1 SV=3)

HSP 1 Score: 94.0 bits (232), Expect = 1.8e-18
Identity = 52/142 (36.62%), Postives = 77/142 (54.23%), Query Frame = 0


Query: 23  FAAKFLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFILAERVSTRFGRVGVGDIVLVRS 82
           +A + LC LH+ + Y      T G SMLPTL+ T D++   +       + +GD ++   
Sbjct: 15  YAIRSLCFLHIIHMYAYEFTETRGESMLPTLSATNDYVHVLKNFQNGRGIKMGDCIVALK 74

Query: 83  PENPRKVMAKRLMGMEGDSVTYVVDPK-----------NSDRCETVV-VPKGHVWIEGDN 142
           P +P   + KR+ GM GD V  +VDP            + +R  T + VP+GHVW+ GDN
Sbjct: 75  PTDPNHRICKRVTGMPGDLV--LVDPSTIVNYVGDVLVDEERFGTYIKVPEGHVWVTGDN 134

Query: 143 IYDSNDSRRFGAVPYGLLQGKI 153
           +  S DSR + A+P GL+ GKI
Sbjct: 135 LSHSLDSRTYNALPMGLIMGKI 154

[Close]

BLAST of MC01g1540 vs. NCBI nr
Match: XP_022146480.1 (mitochondrial inner membrane protease subunit 1 [Momordica charantia] >XP_022146481.1 mitochondrial inner membrane protease subunit 1 [Momordica charantia] >XP_022146482.1 mitochondrial inner membrane protease subunit 1 [Momordica charantia] >XP_022146484.1 mitochondrial inner membrane protease subunit 1 [Momordica charantia] >XP_022146485.1 mitochondrial inner membrane protease subunit 1 [Momordica charantia])

HSP 1 Score: 360 bits (923), Expect = 1.97e-125
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MAGLRRLAQLKPIAVEAAAGTVFAAKFLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60
           MAGLRRLAQLKPIAVEAAAGTVFAAKFLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI
Sbjct: 1   MAGLRRLAQLKPIAVEAAAGTVFAAKFLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60

Query: 61  LAERVSTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNSDRCETVVVP 120
           LAERVSTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNSDRCETVVVP
Sbjct: 61  LAERVSTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNSDRCETVVVP 120

Query: 121 KGHVWIEGDNIYDSNDSRRFGAVPYGLLQGKIFWRIWPPKSFGPLEKRKSNETVL 175
           KGHVWIEGDNIYDSNDSRRFGAVPYGLLQGKIFWRIWPPKSFGPLEKRKSNETVL
Sbjct: 121 KGHVWIEGDNIYDSNDSRRFGAVPYGLLQGKIFWRIWPPKSFGPLEKRKSNETVL 175

[Close]

BLAST of MC01g1540 vs. NCBI nr
Match: XP_038882983.1 (mitochondrial inner membrane protease subunit 1-like [Benincasa hispida])

HSP 1 Score: 345 bits (884), Expect = 1.75e-119
Identity = 165/175 (94.29%), Postives = 170/175 (97.14%), Query Frame = 0


Query: 1   MAGLRRLAQLKPIAVEAAAGTVFAAKFLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60
           MAGLRRLAQLKPIA EA AGTVF AKFLCGLHVANTY+CTAALTYGPSMLPTLNLTGDFI
Sbjct: 1   MAGLRRLAQLKPIAEEALAGTVFVAKFLCGLHVANTYICTAALTYGPSMLPTLNLTGDFI 60

Query: 61  LAERVSTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNSDRCETVVVP 120
           LA+R+STRFGRVGVGDIVLV+SPENPRKVMAKRLMGMEGDSVTYVVDPKNSD CETVVVP
Sbjct: 61  LADRLSTRFGRVGVGDIVLVKSPENPRKVMAKRLMGMEGDSVTYVVDPKNSDWCETVVVP 120

Query: 121 KGHVWIEGDNIYDSNDSRRFGAVPYGLLQGKIFWRIWPPKSFGPLEKRKSNETVL 175
           KGHVWIEGDNIYDSNDSR FGAVPYGLLQGKIFWRIWPPKSFGPLEKRKSNET+L
Sbjct: 121 KGHVWIEGDNIYDSNDSRHFGAVPYGLLQGKIFWRIWPPKSFGPLEKRKSNETIL 175

[Close]

BLAST of MC01g1540 vs. NCBI nr
Match: XP_023517480.1 (mitochondrial inner membrane protease subunit 1-like [Cucurbita pepo subsp. pepo] >XP_023517481.1 mitochondrial inner membrane protease subunit 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 331 bits (849), Expect = 3.79e-114
Identity = 159/175 (90.86%), Postives = 165/175 (94.29%), Query Frame = 0


Query: 1   MAGLRRLAQLKPIAVEAAAGTVFAAKFLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60
           M GLR+LAQLKPIA EA AGTVF AK L GLHVANTYVCTAALTYGPSMLPTLNLTGDFI
Sbjct: 1   MGGLRKLAQLKPIAEEALAGTVFLAKLLAGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60

Query: 61  LAERVSTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNSDRCETVVVP 120
           LAER+STRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKN+D CETVVVP
Sbjct: 61  LAERISTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDWCETVVVP 120

Query: 121 KGHVWIEGDNIYDSNDSRRFGAVPYGLLQGKIFWRIWPPKSFGPLEKRKSNETVL 175
           KGHVWIEGDN+YDS DSR FGAVPYGLLQGK+FWR+WPPKSFGPLEKRK NETVL
Sbjct: 121 KGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRLWPPKSFGPLEKRKPNETVL 175

[Close]

BLAST of MC01g1540 vs. NCBI nr
Match: XP_023003285.1 (mitochondrial inner membrane protease subunit 1-like [Cucurbita maxima] >XP_023003286.1 mitochondrial inner membrane protease subunit 1-like [Cucurbita maxima])

HSP 1 Score: 330 bits (847), Expect = 7.66e-114
Identity = 157/175 (89.71%), Postives = 165/175 (94.29%), Query Frame = 0


Query: 1   MAGLRRLAQLKPIAVEAAAGTVFAAKFLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60
           M GLR+L++LKPIA EA AGTVF AK LCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI
Sbjct: 1   MGGLRKLSKLKPIAEEALAGTVFLAKLLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60

Query: 61  LAERVSTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNSDRCETVVVP 120
            AER+STRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKN+D CETVVVP
Sbjct: 61  FAERISTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDWCETVVVP 120

Query: 121 KGHVWIEGDNIYDSNDSRRFGAVPYGLLQGKIFWRIWPPKSFGPLEKRKSNETVL 175
           KGHVWIEGDN+YDS DSR FGAVPYGLLQGK+FWR+WPPKSFGPLEKRK NETVL
Sbjct: 121 KGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRLWPPKSFGPLEKRKPNETVL 175

[Close]

BLAST of MC01g1540 vs. NCBI nr
Match: XP_022926349.1 (mitochondrial inner membrane protease subunit 1-like [Cucurbita moschata] >XP_022926350.1 mitochondrial inner membrane protease subunit 1-like [Cucurbita moschata] >XP_022926351.1 mitochondrial inner membrane protease subunit 1-like [Cucurbita moschata] >XP_022926353.1 mitochondrial inner membrane protease subunit 1-like [Cucurbita moschata] >XP_022926354.1 mitochondrial inner membrane protease subunit 1-like [Cucurbita moschata])

HSP 1 Score: 328 bits (842), Expect = 4.43e-113
Identity = 158/175 (90.29%), Postives = 164/175 (93.71%), Query Frame = 0


Query: 1   MAGLRRLAQLKPIAVEAAAGTVFAAKFLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60
           M GLR+LAQLKPIA EA AGTVF  K LCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI
Sbjct: 1   MGGLRKLAQLKPIAEEALAGTVFLGKLLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60

Query: 61  LAERVSTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNSDRCETVVVP 120
           LAER+STRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKN+D  ETVVVP
Sbjct: 61  LAERISTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDWRETVVVP 120

Query: 121 KGHVWIEGDNIYDSNDSRRFGAVPYGLLQGKIFWRIWPPKSFGPLEKRKSNETVL 175
           KGHVWIEGDN+YDS DSR FGAVPYGLLQGK+FWR+WPPKSFGPLEKRK NETVL
Sbjct: 121 KGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRLWPPKSFGPLEKRKPNETVL 175

[Close]

BLAST of MC01g1540 vs. ExPASy TrEMBL
Match: A0A6J1CXC8 (mitochondrial inner membrane protease subunit 1 OS=Momordica charantia OX=3673 GN=LOC111015692 PE=4 SV=1)

HSP 1 Score: 360 bits (923), Expect = 9.53e-126
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MAGLRRLAQLKPIAVEAAAGTVFAAKFLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60
           MAGLRRLAQLKPIAVEAAAGTVFAAKFLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI
Sbjct: 1   MAGLRRLAQLKPIAVEAAAGTVFAAKFLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60

Query: 61  LAERVSTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNSDRCETVVVP 120
           LAERVSTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNSDRCETVVVP
Sbjct: 61  LAERVSTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNSDRCETVVVP 120

Query: 121 KGHVWIEGDNIYDSNDSRRFGAVPYGLLQGKIFWRIWPPKSFGPLEKRKSNETVL 175
           KGHVWIEGDNIYDSNDSRRFGAVPYGLLQGKIFWRIWPPKSFGPLEKRKSNETVL
Sbjct: 121 KGHVWIEGDNIYDSNDSRRFGAVPYGLLQGKIFWRIWPPKSFGPLEKRKSNETVL 175

[Close]

BLAST of MC01g1540 vs. ExPASy TrEMBL
Match: A0A6J1KRC7 (mitochondrial inner membrane protease subunit 1-like OS=Cucurbita maxima OX=3661 GN=LOC111496939 PE=4 SV=1)

HSP 1 Score: 330 bits (847), Expect = 3.71e-114
Identity = 157/175 (89.71%), Postives = 165/175 (94.29%), Query Frame = 0


Query: 1   MAGLRRLAQLKPIAVEAAAGTVFAAKFLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60
           M GLR+L++LKPIA EA AGTVF AK LCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI
Sbjct: 1   MGGLRKLSKLKPIAEEALAGTVFLAKLLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60

Query: 61  LAERVSTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNSDRCETVVVP 120
            AER+STRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKN+D CETVVVP
Sbjct: 61  FAERISTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDWCETVVVP 120

Query: 121 KGHVWIEGDNIYDSNDSRRFGAVPYGLLQGKIFWRIWPPKSFGPLEKRKSNETVL 175
           KGHVWIEGDN+YDS DSR FGAVPYGLLQGK+FWR+WPPKSFGPLEKRK NETVL
Sbjct: 121 KGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRLWPPKSFGPLEKRKPNETVL 175

[Close]

BLAST of MC01g1540 vs. ExPASy TrEMBL
Match: A0A6J1EKV6 (mitochondrial inner membrane protease subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111433526 PE=4 SV=1)

HSP 1 Score: 328 bits (842), Expect = 2.15e-113
Identity = 158/175 (90.29%), Postives = 164/175 (93.71%), Query Frame = 0


Query: 1   MAGLRRLAQLKPIAVEAAAGTVFAAKFLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60
           M GLR+LAQLKPIA EA AGTVF  K LCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI
Sbjct: 1   MGGLRKLAQLKPIAEEALAGTVFLGKLLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60

Query: 61  LAERVSTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNSDRCETVVVP 120
           LAER+STRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKN+D  ETVVVP
Sbjct: 61  LAERISTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNNDWRETVVVP 120

Query: 121 KGHVWIEGDNIYDSNDSRRFGAVPYGLLQGKIFWRIWPPKSFGPLEKRKSNETVL 175
           KGHVWIEGDN+YDS DSR FGAVPYGLLQGK+FWR+WPPKSFGPLEKRK NETVL
Sbjct: 121 KGHVWIEGDNMYDSKDSRYFGAVPYGLLQGKVFWRLWPPKSFGPLEKRKPNETVL 175

[Close]

BLAST of MC01g1540 vs. ExPASy TrEMBL
Match: A0A1S3AZY4 (mitochondrial inner membrane protease subunit 1-like OS=Cucumis melo OX=3656 GN=LOC103484382 PE=4 SV=1)

HSP 1 Score: 318 bits (816), Expect = 1.97e-109
Identity = 151/175 (86.29%), Postives = 160/175 (91.43%), Query Frame = 0


Query: 1   MAGLRRLAQLKPIAVEAAAGTVFAAKFLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60
           MAGLR+LA+LKPI  EA AGT+F  K  CGLHVANTY+CTA  TYGPSMLPTLNLTGDF+
Sbjct: 1   MAGLRKLARLKPIVNEALAGTIFVGKLFCGLHVANTYICTATFTYGPSMLPTLNLTGDFV 60

Query: 61  LAERVSTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNSDRCETVVVP 120
           LAER+STRFGRVGVGDIVLVRSPENPRKV+ KRL+GMEGDSVTYVVDPKNSD  ETVVVP
Sbjct: 61  LAERLSTRFGRVGVGDIVLVRSPENPRKVVGKRLIGMEGDSVTYVVDPKNSDWSETVVVP 120

Query: 121 KGHVWIEGDNIYDSNDSRRFGAVPYGLLQGKIFWRIWPPKSFGPLEKRKSNETVL 175
           KGHVWIEGDNIYDS DSR FGAVPYGLLQGKIFWRIWPPK+FG LEKRKSNETVL
Sbjct: 121 KGHVWIEGDNIYDSRDSRNFGAVPYGLLQGKIFWRIWPPKNFGQLEKRKSNETVL 175

[Close]

BLAST of MC01g1540 vs. ExPASy TrEMBL
Match: A0A5A7UEG7 (Mitochondrial inner membrane protease subunit 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G001600 PE=4 SV=1)

HSP 1 Score: 318 bits (816), Expect = 1.97e-109
Identity = 151/175 (86.29%), Postives = 160/175 (91.43%), Query Frame = 0


Query: 1   MAGLRRLAQLKPIAVEAAAGTVFAAKFLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60
           MAGLR+LA+LKPI  EA AGT+F  K  CGLHVANTY+CTA  TYGPSMLPTLNLTGDF+
Sbjct: 1   MAGLRKLARLKPIVNEALAGTIFVGKLFCGLHVANTYICTATFTYGPSMLPTLNLTGDFV 60

Query: 61  LAERVSTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNSDRCETVVVP 120
           LAER+STRFGRVGVGDIVLVRSPENPRKV+ KRL+GMEGDSVTYVVDPKNSD  ETVVVP
Sbjct: 61  LAERLSTRFGRVGVGDIVLVRSPENPRKVVGKRLIGMEGDSVTYVVDPKNSDWSETVVVP 120

Query: 121 KGHVWIEGDNIYDSNDSRRFGAVPYGLLQGKIFWRIWPPKSFGPLEKRKSNETVL 175
           KGHVWIEGDNIYDS DSR FGAVPYGLLQGKIFWRIWPPK+FG LEKRKSNETVL
Sbjct: 121 KGHVWIEGDNIYDSRDSRNFGAVPYGLLQGKIFWRIWPPKNFGQLEKRKSNETVL 175

[Close]

BLAST of MC01g1540 vs. TAIR 10
Match: AT1G53530.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 193.7 bits (491), Expect = 1.2e-49
Identity = 89/165 (53.94%), Postives = 117/165 (70.91%), Query Frame = 0


Query: 1   MAGLRRLAQLKPIAVEAAAGTVFAAKFLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFI 60
           M  L  L Q +  A EA       AKFLC LHV + Y+ +    +GPSMLPTLNLTGD I
Sbjct: 3   MTFLSYLKQWRGTAKEAFENVSIVAKFLCLLHVTDRYIISTTHVHGPSMLPTLNLTGDVI 62

Query: 61  LAERVSTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNSDRCETVVVP 120
           LAE +S RFG++G+GD+VLVRSP +P++++ KR++G+EGD +T+  DP   D   +V+VP
Sbjct: 63  LAEHLSHRFGKIGLGDVVLVRSPRDPKRMVTKRILGLEGDRLTFSADPLVGDASVSVLVP 122

Query: 121 KGHVWIEGDNIYDSNDSRRFGAVPYGLLQGKIFWRIWPPKSFGPL 166
           KGHVWI+GDN+Y S DSR FG VPY L++GK   R+WPP+ FG L
Sbjct: 123 KGHVWIQGDNLYASTDSRHFGPVPYSLIEGKALLRVWPPEYFGSL 167

[Close]

BLAST of MC01g1540 vs. TAIR 10
Match: AT1G29960.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 179.9 bits (455), Expect = 1.8e-45
Identity = 78/150 (52.00%), Postives = 108/150 (72.00%), Query Frame = 0


Query: 16  EAAAGTVFAAKFLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFILAERVSTRFGRVGVG 75
           EA    V  AK  C LHV   Y+   A  YGPSM PTL+ +G+ +LAER+S R+ +   G
Sbjct: 15  EAMKSGVLLAKLYCFLHVTTNYLGFMAYAYGPSMTPTLHPSGNVLLAERISKRYQKPSRG 74

Query: 76  DIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNSDRCETVVVPKGHVWIEGDNIYDSN 135
           DIV++RSPENP K   KR++G+EGD +++V+D + SD  +T+VVPKGHV+++GD  ++S 
Sbjct: 75  DIVVIRSPENPNKTPIKRVIGIEGDCISFVIDSRKSDESQTIVVPKGHVFVQGDYTHNSR 134

Query: 136 DSRRFGAVPYGLLQGKIFWRIWPPKSFGPL 166
           DSR FG VPYGL+QG++ WR+WP + FGPL
Sbjct: 135 DSRNFGTVPYGLIQGRVLWRVWPFQDFGPL 164

[Close]

BLAST of MC01g1540 vs. TAIR 10
Match: AT1G23465.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 168.7 bits (426), Expect = 4.2e-42
Identity = 73/141 (51.77%), Postives = 103/141 (73.05%), Query Frame = 0


Query: 16  EAAAGTVFAAKFLCGLHVANTYVCTAALTYGPSMLPTLNLTGDFILAERVSTRFGRVGVG 75
           EA    +F AK  C LHV   Y+   A  YGPSM+PTL+ +G+ +LAER+S R+ +   G
Sbjct: 15  EAMKSGMFVAKVYCFLHVTTNYLGFMAYAYGPSMIPTLHPSGNMLLAERISKRYQKPSRG 74

Query: 76  DIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDPKNSDRCETVVVPKGHVWIEGDNIYDSN 135
           DIV++RSPENP K   KR++G+EGD +++V+DP  SD  +T+VVPKGHV+++GD  ++S 
Sbjct: 75  DIVVIRSPENPNKTPIKRVVGVEGDCISFVIDPVKSDESQTIVVPKGHVFVQGDYTHNSR 134

Query: 136 DSRRFGAVPYGLLQGKIFWRI 157
           DSR FG VPYGL+QG++ WR+
Sbjct: 135 DSRNFGPVPYGLIQGRVLWRV 155

[Close]

BLAST of MC01g1540 vs. TAIR 10
Match: AT1G53530.2 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 166.0 bits (419), Expect = 2.7e-41
Identity = 70/117 (59.83%), Postives = 93/117 (79.49%), Query Frame = 0


Query: 49  MLPTLNLTGDFILAERVSTRFGRVGVGDIVLVRSPENPRKVMAKRLMGMEGDSVTYVVDP 108
           MLPTLNLTGD ILAE +S RFG++G+GD+VLVRSP +P++++ KR++G+EGD +T+  DP
Sbjct: 1   MLPTLNLTGDVILAEHLSHRFGKIGLGDVVLVRSPRDPKRMVTKRILGLEGDRLTFSADP 60

Query: 109 KNSDRCETVVVPKGHVWIEGDNIYDSNDSRRFGAVPYGLLQGKIFWRIWPPKSFGPL 166
              D   +V+VPKGHVWI+GDN+Y S DSR FG VPY L++GK   R+WPP+ FG L
Sbjct: 61  LVGDASVSVLVPKGHVWIQGDNLYASTDSRHFGPVPYSLIEGKALLRVWPPEYFGSL 117

[Close]

BLAST of MC01g1540 vs. TAIR 10
Match: AT3G08980.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 84.7 bits (208), Expect = 7.9e-17
Identity = 43/127 (33.86%), Postives = 67/127 (52.76%), Query Frame = 0


Query: 39  CTAALTYGPSMLPTLN-----LTGDFILAERVSTRFGRVGVGDIVLVRSPENPRKVMAKR 98
           C+     G SM PT N        D++L ++   +  +   GD+V+  SP +      KR
Sbjct: 29  CSVVPVRGDSMSPTFNPQRNSYLDDYVLVDKFCLKDYKFARGDVVVFSSPTHFGDRYIKR 88

Query: 99  LMGMEGDSVTYVVDPKNSDRCETVVVPKGHVWIEGDNIYDSNDSRRFGAVPYGLLQGKIF 158
           ++GM G+ +        S   + + VP+GH W+EGDN   S DSR FG +P GL+QG++ 
Sbjct: 89  IVGMPGEWI--------SSSRDVIRVPEGHCWVEGDNKTSSLDSRSFGPIPLGLIQGRVT 147

Query: 159 WRIWPPK 161
             +WPP+
Sbjct: 149 RVMWPPQ 147

The following BLAST results are available for this feature:

BLAST of MC01g1540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96LU5	8.2e-27	40.43	Mitochondrial inner membrane protease subunit 1 OS=Homo sapiens OX=9606 GN=IMMP1...	[more]
Q9CQU8	1.4e-26	40.43	Mitochondrial inner membrane protease subunit 1 OS=Mus musculus OX=10090 GN=Immp...	[more]
Q28I39	2.4e-26	40.69	Mitochondrial inner membrane protease subunit 1 OS=Xenopus tropicalis OX=8364 GN...	[more]
O74800	5.3e-26	40.88	Mitochondrial inner membrane protease subunit 1 OS=Schizosaccharomyces pombe (st...	[more]
P28627	1.8e-18	36.62	Mitochondrial inner membrane protease subunit 1 OS=Saccharomyces cerevisiae (str...	[more]

BLAST of MC01g1540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146480.1	1.97e-125	100.00	mitochondrial inner membrane protease subunit 1 [Momordica charantia] >XP_022146...	[more]
XP_038882983.1	1.75e-119	94.29	mitochondrial inner membrane protease subunit 1-like [Benincasa hispida]	[more]
XP_023517480.1	3.79e-114	90.86	mitochondrial inner membrane protease subunit 1-like [Cucurbita pepo subsp. pepo...	[more]
XP_023003285.1	7.66e-114	89.71	mitochondrial inner membrane protease subunit 1-like [Cucurbita maxima] >XP_0230...	[more]
XP_022926349.1	4.43e-113	90.29	mitochondrial inner membrane protease subunit 1-like [Cucurbita moschata] >XP_02...	[more]

BLAST of MC01g1540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CXC8	9.53e-126	100.00	mitochondrial inner membrane protease subunit 1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1KRC7	3.71e-114	89.71	mitochondrial inner membrane protease subunit 1-like OS=Cucurbita maxima OX=3661...	[more]
A0A6J1EKV6	2.15e-113	90.29	mitochondrial inner membrane protease subunit 1-like OS=Cucurbita moschata OX=36...	[more]
A0A1S3AZY4	1.97e-109	86.29	mitochondrial inner membrane protease subunit 1-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A5A7UEG7	1.97e-109	86.29	Mitochondrial inner membrane protease subunit 1-like OS=Cucumis melo var. makuwa...	[more]

BLAST of MC01g1540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53530.1	1.2e-49	53.94	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT1G29960.1	1.8e-45	52.00	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT1G23465.1	4.2e-42	51.77	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT1G53530.2	2.7e-41	59.83	Peptidase S24/S26A/S26B/S26C family protein	[more]
AT3G08980.1	7.9e-17	33.86	Peptidase S24/S26A/S26B/S26C family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000223	Peptidase S26A, signal peptidase I	PRINTS	PR00727	LEADERPTASE	coord: 119..138 score: 48.81 coord: 37..53 score: 34.31 coord: 90..102 score: 42.86
IPR019533	Peptidase S26	PFAM	PF10502	Peptidase_S26	coord: 113..157 e-value: 8.2E-8 score: 32.4 coord: 32..104 e-value: 1.9E-12 score: 47.4
IPR019533	Peptidase S26	CDD	cd06530	S26_SPase_I	coord: 46..152 e-value: 1.16907E-21 score: 81.8631
None	No IPR available	GENE3D	2.10.109.10	Umud Fragment, subunit A	coord: 34..170 e-value: 4.7E-27 score: 96.4
None	No IPR available	PANTHER	PTHR12383	PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED	coord: 4..168
None	No IPR available	PANTHER	PTHR12383:SF30	PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN	coord: 4..168
IPR036286	LexA/Signal peptidase-like superfamily	SUPERFAMILY	51306	LexA/Signal peptidase	coord: 36..165

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g1540.1	MC01g1540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006627	protein processing involved in protein targeting to mitochondrion
biological_process	GO:0006465	signal peptide processing
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0042720	mitochondrial inner membrane peptidase complex
cellular_component	GO:0016020	membrane
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0008236	serine-type peptidase activity