MC01g1528 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g1528
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	DNA-binding protein DDB_G0278111
Location	MC01: 19555103 .. 19559414 (+)
RNA-Seq Expression	MC01g1528
Synteny	MC01g1528

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CGATTATGTCAAGTCCATATGCATATGAAAATGTTAGAAATTGAATACTCTATTTCATACACTCATTCAAAGAAAGAAAAAGAAAAAATAGAACCCTAAATAAGAAATTAGGAGATTCGATACGAGCTACAAGGAAAAAGTGGGTCGCGTCCCATAAACGCGTAACCGAGGAAATCCGTCTCTTCGTTTCCGCCTCTCCGGCTCATAGGAACATATTTTGAACTGTAGTTCTACCAATTGTTAGCTCGCTCCCCGAAACAATGGTAAATTCGCCCGTTTCAATTTCCTGTATTCAATTTATATCTTCTTTGGAAACCCTGCAGTTTGCGATGTAATCAAATGTTGCTTCAACTTAATTTTACCCCCTTTTGTTCAGTCTTTGATTTTCATTTTTCCGAACCCCGTTTTTTCCAATGTGGGTCTTGCTGTTTTACTCTGGCAGTAGTTCTTCTGTTCCTAGTCTGGGTTTTGGCTTTTATCTTGTGGCGTTTGCTTGTGTTTTCCCCCTTAGTGAGGATTCCGATTATAGTTGGATGACTCAAGAGGCCAAGATTAAATTAGAAATCAAGAGTCTATTTCTATGCGTAACTTGTTAACTGTATCCAACCAAACTCACGCGCACAGTATTGAGTGGTTTTTGGTTTTGAAAAAATTCGTTTGATAAATTCATGCTCACACTGCAATTTCAAATGAAGTGAGATATGATGTATTATTTATAACTCATTTCAGGGTGACAGGTTAGAAAAATAAGTTTTTACTTGTTGGCGTTGTCAAGGCTCAAGAAATGTCAAAAAAAGATAGGGAAATTGATCTCTGCTAGGTAGTTTTTGCACCAGCATTTTAAATTTGAACCATCAATTTATCATATTTATTGGTATTATTATTATTATTTACCGTAATCTCTGTCTGTCTCACTGTCAAATTTTTGCTTCAGTTCCTCATAGAGGACCAATAAAAATCTATATTTTACGACCTCACCAAGTGATTCCAATCTTATAAGTTTGATTACTTAGCTTGGCAAGGCAAGCTTAGATGCTTACTTTGTCAAAGTAGGAAGTTGCTATGGCTTTCAACTATACTTGGCATCTGATAAACTCTTATCTTTCCTTCTCGTGGCCTTTTTATTATCTCTGTTATAATTTTGAATGAAATACTTGGCTCTTATATAGGATGATCCTGAACTAGAAGCAATCAGGCAAAGAAGAATGCAGGAACTCATGGCCCAGCGAGGCATGGTAAGCTGTGGTCTATTTGTTTACATGGTAGCAACTGCCTACATTTTACTTGATCGTTGACATCCCTACTGACTTCTATTGATGATTAGGGAAGCCAAAATAATTCCGAACAACAGAAGGCCCAGGAAGATGCTAGGAGGTTCTCAATTTTATTTTTATTATTTTGCAGTTGTTATTTAGTTACCACTTTTGTTTTTCAAGTCCTACTGTAATATGCATATGAAAACAATGATTTTCACTTTCAGTGAAGCAGAGGAACGCAGACAAATGATGCTTAGTCAGATTTTGTCAATGCAAGCAAGAGAAAGACGTAAGTTGAAATAGAAAAGTTACTTATTTTCAAAGTTCTTGATTGCAATTTATTCTTCAACTTTGGAGAGAGCTAGTTTCTTCTATACGGTCTGTACGGTCTCTGAAGTCTGATTGTCTGAAGATGCATCTATTCCTTGCTCTGTGGTTTGAAGTTTTGGATCCATTTTCATCAGGAGCTAATCATGAAATTAAGAAACTAGTTTTGACAAAAACACTCTGAAGAGACCAAGGACAACTATCCTTAAAAGTGTGTTCTTCTGTTCTTCATCCATCAATCCCACATTGATTTTCCCACCCTGAATGAAAGAAAAATAAAAGATTCTCTTAATTGGATTTAGATCTCATTGGTTCAGTTTAAGGATGGATCTGATTGCATACTTTCAATTTTGAGGCAATTCTTCATTTTATGGACCATTCTTGATTAGAGAGTTTATGCTGGGTATGGATAACATTTTCCTTTTTCTCAGTGATTATTGGATATTCTCTTTTATAGGTAATTAGTTGTGATGGGTATTGCATACTATGTAATTTTTGGACACGTGGTTGCAAAAAAAATGTTTCAGATGATTCATCACATGAATTGGATACCTTTTGCCCATTTCAATCCACGGCTCTTTTGCAGTATATCATTGTTCAATTGAATTCAGATACCTGTCAAGTGTACTTTTTGCAGCCTTGCTTGTAAATGCTCGAGTAAATTTGTGATTTTAGCATTTATGCTCTTGACTTTACAATATTGTTATCAAATAAGATTGCTAAGAGTATAAAAATTTAGATGGAATATGGATATTCTTTTTTCGAATGTTTGATGATACTGGATTTCATTTTGCCTCAAACCTTATATTGTGAAGATCGTATCCTTATCAACTTGCTGCTTTGTTTTTATCTGGCATGAGGTAGAACGGGCAATTTATGCATTAGTTATTCATCATTGAACTTAGGTTACTGGCTTTTTTCGCCTATTCGTTTTTTTCTTTTCCTGTGCTGTTATGCAGTTGCTCGAATTGCTTTGGTGAAACCTGAGAAGGCAAGAGGTGTTGAAGATGTTATATTGAGAGCTGCACAGATGGGCCAAATTGTAGAGAAGGTACGGTATCTCTTTTCAGTGTTTCTGATGAAAACACATCTATATTTACTCTAAAATATGACAAAGTCCAGTATCAAGAAAACAAATGGATTTTACCATTGCTTTGCAGGTATCGGAAGAGAGGCTTATAACATTGCTAGAACAGATCAACAACCAAACCACGAAACAGACTAAAGTCACTGTGAGTTTTCATTGCTTATTTTATGGGTGCCTTCTGAATTATGATATGTTCTTGCTTCTTGCTCTGACGGTTGTCATATATGTTCATGATTCTTCAGATACAGAGGCGTCGAAGCGTTCTCGAGGATGATGATTAGCAAGTGACATGAATTGCACACCTTATATGATATATGTATGTACCAGCAGTCTTGGTTGTGTGTTAATCGCTTACATGATATGAAATTTACCTCGTTATCTATGTATTCTGCTTGCTACTTCGTCTTGATCCCCTCATATATCTCATCTCAGAATGCAAAAGCTGCTCAGAATTAGCAGGTATTACTGTTATTACAATTGTTGCAGTCAAAAATTTTCAAACAATTAAGCTGTGTTACAGAGTCTTAACCTTGAACTATTATGTTGCTTTCTTATTTGTGATTGATCAGAGGAATTGAATTTCCTTCAATTCTTGGTGTAGTGTTCAATTAAGAGCCTGATATGTCACAGTCTGATGAATTCCCACGAATTTAGAACAATAGAATACAGCTCTTGATAAAGAATGGATTTGGATTGCTTTGCTGTTTATATGTTAAATGATGAAATTGCATTTATTAACATCTTCTGTTTCAATATAAATGTGGAAGTTAAACAAGTACAAAGTACAAGTAGGGGTCAAATGCAACCCCCTTTTTTTTTGGACAGTAAGTTCACAATCAAACCTAACAACACATTACATCAAGTTCACAATGCACCTTGAACACAAACAACAATGAACATACCTTGAACGTCCAGATGTAACAAATGACAGAGAGGGGCGATGGGCGACAAACGGACGAACGGTGAGATGCAAGTTCATGAGATTATGAGAGATGAGGGTGAGAAGAGAGATGTGAGTGAAGTTCATGAGAGAGATGAGAGTGAGATTATGAGAGATGAGGGTGGATGTGAGAAAGATGAGAGTGAGACCTTGAGATAGATGAAAATTCGAGGCAAGAGATCTAGAGGCGTCTATTAAACTCCATAAGGCTATAACATAATATATATGATAATTGGTTTGAGTTGAACTAATTTTCTTTCTGAACTTGTTAACCAAAACAAATTGATCGGTTCTTAAAAATCTTAACCCAACTCAAGTCGAACACTTACCTAATCCAACTCAACTCTTGTGGTTTGGGTTAAGTTATTCGAATTCTTCATATCACCGAATTTTCTTTGTACAGCCCTAAGTACGAAGTGTATTTTCCTGGGAGATTTTGCATATGTTTGGTACTTTAGTCAGGCCCATTATTTAATTGAGAGCATTTTCTGTTGTCCCTTTGTTGTGGGATTCTCTCTGTGTATCTTTTGGGTAGTGATGTGATGTCTTTATTTTGATAATACCAAGTCACATCAATCCATTTATGACTTTGATGTTGAAACTTTGCCATGGATATGGATCTCTGCTCTGTGGATAAAAGGATAGGGGTATTATTGGAAAATAATACTGAAAATATTCCTCACAAAATAAGGATATTCCAGG

mRNA sequence

CGATTATGTCAAGTCCATATGCATATGAAAATGTTAGAAATTGAATACTCTATTTCATACACTCATTCAAAGAAAGAAAAAGAAAAAATAGAACCCTAAATAAGAAATTAGGAGATTCGATACGAGCTACAAGGAAAAAGTGGGTCGCGTCCCATAAACGCGTAACCGAGGAAATCCGTCTCTTCGTTTCCGCCTCTCCGGCTCATAGGAACATATTTTGAACTGTAGTTCTACCAATTGTTAGCTCGCTCCCCGAAACAATGGATGATCCTGAACTAGAAGCAATCAGGCAAAGAAGAATGCAGGAACTCATGGCCCAGCGAGGCATGGGAAGCCAAAATAATTCCGAACAACAGAAGGCCCAGGAAGATGCTAGGAGTGAAGCAGAGGAACGCAGACAAATGATGCTTAGTCAGATTTTGTCAATGCAAGCAAGAGAAAGACTTGCTCGAATTGCTTTGGTGAAACCTGAGAAGGCAAGAGGTGTTGAAGATGTTATATTGAGAGCTGCACAGATGGGCCAAATTGTAGAGAAGGTATCGGAAGAGAGGCTTATAACATTGCTAGAACAGATCAACAACCAAACCACGAAACAGACTAAAGTCACTATACAGAGGCGTCGAAGCGTTCTCGAGGATGATGATTAGCAAGTGACATGAATTGCACACCTTATATGATATATAATGCAAAAGCTGCTCAGAATTAGCAGGTATTACTGTTATTACAATTGTTGCAGTCAAAAATTTTCAAACAATTAAGCTGTGTTACAGAGTCTTAACCTTGAACTATTATGTTGCTTTCTTATTTGTGATTGATCAGAGGAATTGAATTTCCTTCAATTCTTGGTGTAGTGTTCAATTAAGAGCCTGATATGTCACAGTCTGATGAATTCCCACGAATTTAGAACAATAGAATACAGCTCTTGATAAAGAATGGATTTGGATTGCTTTGCTGTTTATATGTTAAATGATGAAATTGCATTTATTAACATCTTCTGTTTCAATATAAATGTGGAAGTTAAACAAGTACAAAGTACAAGTAGGGGTCAAATGCAACCCCCTTTTTTTTTGGACAGTAAGTTCACAATCAAACCTAACAACACATTACATCAAGTTCACAATGCACCTTGAACACAAACAACAATGAACATACCTTGAACGTCCAGATGTAACAAATGACAGAGAGGGGCGATGGGCGACAAACGGACGAACGGTGAGATGCAAGTTCATGAGATTATGAGAGATGAGGGTGAGAAGAGAGATGTGAGTGAAGTTCATGAGAGAGATGAGAGTGAGATTATGAGAGATGAGGGTGGATGTGAGAAAGATGAGAGTGAGACCTTGAGATAGATGAAAATTCGAGGCAAGAGATCTAGAGGCGTCTATTAAACTCCATAAGGCTATAACATAATATATATGATAATTGGTTTGAGTTGAACTAATTTTCTTTCTGAACTTGTTAACCAAAACAAATTGATCGGTTCTTAAAAATCTTAACCCAACTCAAGTCGAACACTTACCTAATCCAACTCAACTCTTGTGGTTTGGGTTAAGTTATTCGAATTCTTCATATCACCGAATTTTCTTTGTACAGCCCTAAGTACGAAGTGTATTTTCCTGGGAGATTTTGCATATGTTTGGTACTTTAGTCAGGCCCATTATTTAATTGAGAGCATTTTCTGTTGTCCCTTTGTTGTGGGATTCTCTCTGTGTATCTTTTGGGTAGTGATGTGATGTCTTTATTTTGATAATACCAAGTCACATCAATCCATTTATGACTTTGATGTTGAAACTTTGCCATGGATATGGATCTCTGCTCTGTGGATAAAAGGATAGGGGTATTATTGGAAAATAATACTGAAAATATTCCTCACAAAATAAGGATATTCCAGG

Coding sequence (CDS)

ATGGATGATCCTGAACTAGAAGCAATCAGGCAAAGAAGAATGCAGGAACTCATGGCCCAGCGAGGCATGGGAAGCCAAAATAATTCCGAACAACAGAAGGCCCAGGAAGATGCTAGGAGTGAAGCAGAGGAACGCAGACAAATGATGCTTAGTCAGATTTTGTCAATGCAAGCAAGAGAAAGACTTGCTCGAATTGCTTTGGTGAAACCTGAGAAGGCAAGAGGTGTTGAAGATGTTATATTGAGAGCTGCACAGATGGGCCAAATTGTAGAGAAGGTATCGGAAGAGAGGCTTATAACATTGCTAGAACAGATCAACAACCAAACCACGAAACAGACTAAAGTCACTATACAGAGGCGTCGAAGCGTTCTCGAGGATGATGATTAG

Protein sequence

MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRRRSVLEDDD

Homology

[Close]

BLAST of MC01g1528 vs. ExPASy Swiss-Prot
Match: Q54YS0 (DNA-binding protein DDB_G0278111 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0278111 PE=3 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 1.9e-17
Identity = 59/114 (51.75%), Postives = 84/114 (73.68%), Query Frame = 0


Query: 15  QELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKAR 74
           Q+L   +G G   + E Q+ QE  R EA ERRQ +L QIL+  ARERL+RI +VKPEK+R
Sbjct: 9   QQLSQMQGQGF--DPEAQQRQEAQRQEANERRQGILIQILTPDARERLSRITIVKPEKSR 68

Query: 75  GVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRRRSVLEDDD 129
            +ED+I+RAAQ GQ+ E+V + +LI+LLEQ+ ++ TK+T +T++RR   +EDDD
Sbjct: 69  QIEDLIIRAAQTGQLTERVDDAKLISLLEQL-SEKTKKTTITMKRR--TIEDDD 117

[Close]

BLAST of MC01g1528 vs. ExPASy Swiss-Prot
Match: O13929 (Uncharacterized protein C23C4.09c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC23C4.09c PE=3 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.1e-15
Identity = 56/127 (44.09%), Postives = 81/127 (63.78%), Query Frame = 0


Query: 3   DPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERL 62
           D EL+AIRQ R+ +L A+ G    N +    + +  +   +E RQ +LSQIL   AR+RL
Sbjct: 2   DEELQAIRQARLAQLQAEHGSAPSNIASGPSSNQQQQEVQDEMRQNLLSQILEHPARDRL 61

Query: 63  ARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTK--QTKVTIQRR 122
            RIALV+ ++A  VE+++LR A+ GQI  K+SE  LI LLE+I+ + +K  +TK+ I RR
Sbjct: 62  RRIALVRKDRAEAVEELLLRMAKTGQISHKISEPELIELLEKISGEVSKRNETKIVINRR 121

Query: 123 RSVLEDD 128
               EDD
Sbjct: 122 VQDDEDD 128

[Close]

BLAST of MC01g1528 vs. ExPASy Swiss-Prot
Match: O14737 (Programmed cell death protein 5 OS=Homo sapiens OX=9606 GN=PDCD5 PE=1 SV=3)

HSP 1 Score: 82.4 bits (202), Expect = 4.0e-15
Identity = 53/128 (41.41%), Postives = 82/128 (64.06%), Query Frame = 0


Query: 1   MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARE 60
           M D ELEA+R++R+ EL A+ G           AQ++A+    E R  +L+Q+L   AR 
Sbjct: 1   MADEELEALRRQRLAELQAKHG------DPGDAAQQEAKHREAEMRNSILAQVLDQSARA 60

Query: 61  RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR 120
           RL+ +ALVKPEK + VE+ +++ A+ GQ+ EKVSE+ LI +L++++ QT K T V   RR
Sbjct: 61  RLSNLALVKPEKTKAVENYLIQMARYGQLSEKVSEQGLIEILKKVSQQTEKTTTVKFNRR 120

Query: 121 RSVLEDDD 129
           + +  D+D
Sbjct: 121 KVMDSDED 122

[Close]

BLAST of MC01g1528 vs. ExPASy Swiss-Prot
Match: P56812 (Programmed cell death protein 5 OS=Mus musculus OX=10090 GN=Pdcd5 PE=1 SV=3)

HSP 1 Score: 82.4 bits (202), Expect = 4.0e-15
Identity = 53/128 (41.41%), Postives = 82/128 (64.06%), Query Frame = 0


Query: 1   MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARE 60
           M D ELEA+R++R+ EL A+ G           AQ++A+    E R  +L+Q+L   AR 
Sbjct: 1   MADEELEALRKQRLAELQAKHG------DPGDAAQQEAKQREAEMRNSILAQVLDQSARA 60

Query: 61  RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR 120
           RL+ +ALVKPEK + VE+ +++ A+ GQ+  KVSE+ LI +LE+++ QT K+T V   RR
Sbjct: 61  RLSNLALVKPEKTKAVENYLIQMARYGQLSGKVSEQGLIEILEKVSQQTEKKTTVKFNRR 120

Query: 121 RSVLEDDD 129
           + +  D+D
Sbjct: 121 KVMDSDED 122

[Close]

BLAST of MC01g1528 vs. ExPASy Swiss-Prot
Match: Q5RBT0 (Programmed cell death protein 5 OS=Pongo abelii OX=9601 GN=PDCD5 PE=2 SV=3)

HSP 1 Score: 82.4 bits (202), Expect = 4.0e-15
Identity = 53/128 (41.41%), Postives = 82/128 (64.06%), Query Frame = 0


Query: 1   MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARE 60
           M D ELEA+R++R+ EL A+ G           AQ++A+    E R  +L+Q+L   AR 
Sbjct: 1   MADEELEALRRQRLAELQAKHG------DPGDAAQQEAKHREAEMRNSILAQVLDQSARA 60

Query: 61  RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR 120
           RL+ +ALVKPEK + VE+ +++ A+ GQ+ EKVSE+ LI +L++++ QT K T V   RR
Sbjct: 61  RLSNLALVKPEKTKAVENYLIQMARYGQLSEKVSEQGLIEILKKVSQQTEKTTTVKFNRR 120

Query: 121 RSVLEDDD 129
           + +  D+D
Sbjct: 121 KVMDSDED 122

[Close]

BLAST of MC01g1528 vs. NCBI nr
Match: XP_022142304.1 (DNA-binding protein DDB_G0278111 isoform X1 [Momordica charantia] >XP_022142305.1 DNA-binding protein DDB_G0278111 isoform X1 [Momordica charantia])

HSP 1 Score: 223 bits (569), Expect = 5.58e-73
Identity = 127/128 (99.22%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARE 60
           MDDPELEAIRQRRMQELM+QRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARE
Sbjct: 1   MDDPELEAIRQRRMQELMSQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARE 60

Query: 61  RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR 120
           RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR
Sbjct: 61  RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR 120

Query: 121 RSVLEDDD 128
           RSVLEDDD
Sbjct: 121 RSVLEDDD 128

[Close]

BLAST of MC01g1528 vs. NCBI nr
Match: XP_038881892.1 (DNA-binding protein DDB_G0278111 [Benincasa hispida] >XP_038881893.1 DNA-binding protein DDB_G0278111 [Benincasa hispida])

HSP 1 Score: 221 bits (563), Expect = 4.59e-72
Identity = 126/128 (98.44%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARE 60
           MDDPELEAIRQRRMQELMAQRGMGSQNN EQQKAQE+ARSEAEERRQMMLSQILSMQARE
Sbjct: 1   MDDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARE 60

Query: 61  RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR 120
           RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR
Sbjct: 61  RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR 120

Query: 121 RSVLEDDD 128
           RSVLEDDD
Sbjct: 121 RSVLEDDD 128

[Close]

BLAST of MC01g1528 vs. NCBI nr
Match: XP_008439666.1 (PREDICTED: DNA-binding protein DDB_G0278111 [Cucumis melo] >XP_011658277.1 DNA-binding protein DDB_G0278111 isoform X2 [Cucumis sativus] >KAE8647741.1 hypothetical protein Csa_003574 [Cucumis sativus])

HSP 1 Score: 218 bits (555), Expect = 7.61e-71
Identity = 124/128 (96.88%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARE 60
           M+DPELEAIRQRRMQELMAQRGMGSQNN EQQKAQE+ARSEAEERRQMMLSQILSMQARE
Sbjct: 1   MNDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARE 60

Query: 61  RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR 120
           RL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR
Sbjct: 61  RLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR 120

Query: 121 RSVLEDDD 128
           RSVLEDDD
Sbjct: 121 RSVLEDDD 128

[Close]

BLAST of MC01g1528 vs. NCBI nr
Match: XP_022925642.1 (DNA-binding protein DDB_G0278111-like isoform X2 [Cucurbita moschata] >XP_022978919.1 DNA-binding protein DDB_G0278111-like isoform X2 [Cucurbita maxima] >KAG6581408.1 Programmed cell death protein 5, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034694.1 Programmed cell death protein 5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 217 bits (553), Expect = 1.54e-70
Identity = 123/128 (96.09%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARE 60
           MDDPELEAIRQRRMQELMAQRG+GSQNN EQQKAQE+A+SEAEERRQMMLSQILSMQARE
Sbjct: 1   MDDPELEAIRQRRMQELMAQRGVGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARE 60

Query: 61  RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR 120
           RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR
Sbjct: 61  RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR 120

Query: 121 RSVLEDDD 128
           RSVL+DDD
Sbjct: 121 RSVLDDDD 128

[Close]

BLAST of MC01g1528 vs. NCBI nr
Match: XP_022926831.1 (DNA-binding protein DDB_G0278111-like [Cucurbita moschata] >XP_023003579.1 DNA-binding protein DDB_G0278111-like [Cucurbita maxima] >KAG7026483.1 Programmed cell death protein 5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 217 bits (552), Expect = 2.18e-70
Identity = 123/128 (96.09%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARE 60
           MDDPELEAIRQRRMQELMAQRGMGSQ+N EQQKAQE+A+SEAEERRQMMLSQILSMQARE
Sbjct: 1   MDDPELEAIRQRRMQELMAQRGMGSQSNPEQQKAQEEAKSEAEERRQMMLSQILSMQARE 60

Query: 61  RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR 120
           RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEE+LITLLEQINNQTTKQTKVTIQRR
Sbjct: 61  RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEEKLITLLEQINNQTTKQTKVTIQRR 120

Query: 121 RSVLEDDD 128
           RSVLEDDD
Sbjct: 121 RSVLEDDD 128

[Close]

BLAST of MC01g1528 vs. ExPASy TrEMBL
Match: A0A6J1CKK4 (DNA-binding protein DDB_G0278111 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012456 PE=3 SV=1)

HSP 1 Score: 223 bits (569), Expect = 2.70e-73
Identity = 127/128 (99.22%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARE 60
           MDDPELEAIRQRRMQELM+QRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARE
Sbjct: 1   MDDPELEAIRQRRMQELMSQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARE 60

Query: 61  RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR 120
           RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR
Sbjct: 61  RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR 120

Query: 121 RSVLEDDD 128
           RSVLEDDD
Sbjct: 121 RSVLEDDD 128

[Close]

BLAST of MC01g1528 vs. ExPASy TrEMBL
Match: A0A1S3AZB0 (DNA-binding protein DDB_G0278111 OS=Cucumis melo OX=3656 GN=LOC103484392 PE=3 SV=1)

HSP 1 Score: 218 bits (555), Expect = 3.68e-71
Identity = 124/128 (96.88%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARE 60
           M+DPELEAIRQRRMQELMAQRGMGSQNN EQQKAQE+ARSEAEERRQMMLSQILSMQARE
Sbjct: 1   MNDPELEAIRQRRMQELMAQRGMGSQNNPEQQKAQEEARSEAEERRQMMLSQILSMQARE 60

Query: 61  RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR 120
           RL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR
Sbjct: 61  RLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR 120

Query: 121 RSVLEDDD 128
           RSVLEDDD
Sbjct: 121 RSVLEDDD 128

[Close]

BLAST of MC01g1528 vs. ExPASy TrEMBL
Match: A0A6J1IVC3 (DNA-binding protein DDB_G0278111-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478726 PE=3 SV=1)

HSP 1 Score: 217 bits (553), Expect = 7.43e-71
Identity = 123/128 (96.09%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARE 60
           MDDPELEAIRQRRMQELMAQRG+GSQNN EQQKAQE+A+SEAEERRQMMLSQILSMQARE
Sbjct: 1   MDDPELEAIRQRRMQELMAQRGVGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARE 60

Query: 61  RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR 120
           RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR
Sbjct: 61  RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR 120

Query: 121 RSVLEDDD 128
           RSVL+DDD
Sbjct: 121 RSVLDDDD 128

[Close]

BLAST of MC01g1528 vs. ExPASy TrEMBL
Match: A0A6J1EC84 (DNA-binding protein DDB_G0278111-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432996 PE=3 SV=1)

HSP 1 Score: 217 bits (553), Expect = 7.43e-71
Identity = 123/128 (96.09%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARE 60
           MDDPELEAIRQRRMQELMAQRG+GSQNN EQQKAQE+A+SEAEERRQMMLSQILSMQARE
Sbjct: 1   MDDPELEAIRQRRMQELMAQRGVGSQNNPEQQKAQEEAKSEAEERRQMMLSQILSMQARE 60

Query: 61  RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR 120
           RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR
Sbjct: 61  RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR 120

Query: 121 RSVLEDDD 128
           RSVL+DDD
Sbjct: 121 RSVLDDDD 128

[Close]

BLAST of MC01g1528 vs. ExPASy TrEMBL
Match: A0A6J1KTQ8 (DNA-binding protein DDB_G0278111-like OS=Cucurbita maxima OX=3661 GN=LOC111497139 PE=3 SV=1)

HSP 1 Score: 217 bits (552), Expect = 1.06e-70
Identity = 123/128 (96.09%), Postives = 127/128 (99.22%), Query Frame = 0


Query: 1   MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARE 60
           MDDPELEAIRQRRMQELMAQRGMGSQ+N EQQKAQE+A+SEAEERRQMMLSQILSMQARE
Sbjct: 1   MDDPELEAIRQRRMQELMAQRGMGSQSNPEQQKAQEEAKSEAEERRQMMLSQILSMQARE 60

Query: 61  RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTIQRR 120
           RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEE+LITLLEQINNQTTKQTKVTIQRR
Sbjct: 61  RLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEEKLITLLEQINNQTTKQTKVTIQRR 120

Query: 121 RSVLEDDD 128
           RSVLEDDD
Sbjct: 121 RSVLEDDD 128

[Close]

BLAST of MC01g1528 vs. TAIR 10
Match: AT1G29850.1 (double-stranded DNA-binding family protein )

HSP 1 Score: 180.6 bits (457), Expect = 7.7e-46
Identity = 109/131 (83.21%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MDDPELEAIRQRRMQELMAQRGM---GSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQ 60
           M DPELEAIRQRRMQELMA++GM   G+Q N EQ+K QEDA+ EA+ERRQMMLSQ+LS Q
Sbjct: 1   MADPELEAIRQRRMQELMARQGMGKQGNQQNPEQEKQQEDAKREADERRQMMLSQVLSSQ 60

Query: 61  ARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTI 120
           ARER+ARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQIN+QTTKQTKVT 
Sbjct: 61  ARERIARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINSQTTKQTKVTY 120

Query: 121 QRRRSVLEDDD 129
           QRRR V  DDD
Sbjct: 121 QRRRGV--DDD 129

[Close]

BLAST of MC01g1528 vs. TAIR 10
Match: AT1G29850.2 (double-stranded DNA-binding family protein )

HSP 1 Score: 180.3 bits (456), Expect = 1.0e-45
Identity = 109/132 (82.58%), Postives = 118/132 (89.39%), Query Frame = 0


Query: 1   MDDPELEAIRQRRMQELMAQRGM----GSQNNSEQQKAQEDARSEAEERRQMMLSQILSM 60
           M DPELEAIRQRRMQELMA++GM    G+Q N EQ+K QEDA+ EA+ERRQMMLSQ+LS 
Sbjct: 1   MADPELEAIRQRRMQELMARQGMQGKQGNQQNPEQEKQQEDAKREADERRQMMLSQVLSS 60

Query: 61  QARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVT 120
           QARER+ARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQIN+QTTKQTKVT
Sbjct: 61  QARERIARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINSQTTKQTKVT 120

Query: 121 IQRRRSVLEDDD 129
            QRRR V  DDD
Sbjct: 121 YQRRRGV--DDD 130

[Close]

BLAST of MC01g1528 vs. TAIR 10
Match: AT1G29850.3 (double-stranded DNA-binding family protein )

HSP 1 Score: 172.6 bits (436), Expect = 2.1e-43
Identity = 102/126 (80.95%), Postives = 113/126 (89.68%), Query Frame = 0


Query: 1   MDDPELEAIRQRRMQELMAQRGM---GSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQ 60
           M DPELEAIRQRRMQELMA++GM   G+Q N EQ+K QEDA+ EA+ERRQMMLSQ+LS Q
Sbjct: 1   MADPELEAIRQRRMQELMARQGMGKQGNQQNPEQEKQQEDAKREADERRQMMLSQVLSSQ 60

Query: 61  ARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTI 120
           ARER+ARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQIN+QTTKQTKVT+
Sbjct: 61  ARERIARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINSQTTKQTKVTV 120

Query: 121 QRRRSV 124
               +V
Sbjct: 121 STNGAV 126

The following BLAST results are available for this feature:

BLAST of MC01g1528 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54YS0	1.9e-17	51.75	DNA-binding protein DDB_G0278111 OS=Dictyostelium discoideum OX=44689 GN=DDB_G02...	[more]
O13929	3.1e-15	44.09	Uncharacterized protein C23C4.09c OS=Schizosaccharomyces pombe (strain 972 / ATC...	[more]
O14737	4.0e-15	41.41	Programmed cell death protein 5 OS=Homo sapiens OX=9606 GN=PDCD5 PE=1 SV=3	[more]
P56812	4.0e-15	41.41	Programmed cell death protein 5 OS=Mus musculus OX=10090 GN=Pdcd5 PE=1 SV=3	[more]
Q5RBT0	4.0e-15	41.41	Programmed cell death protein 5 OS=Pongo abelii OX=9601 GN=PDCD5 PE=2 SV=3	[more]

BLAST of MC01g1528 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142304.1	5.58e-73	99.22	DNA-binding protein DDB_G0278111 isoform X1 [Momordica charantia] >XP_022142305....	[more]
XP_038881892.1	4.59e-72	98.44	DNA-binding protein DDB_G0278111 [Benincasa hispida] >XP_038881893.1 DNA-binding...	[more]
XP_008439666.1	7.61e-71	96.88	PREDICTED: DNA-binding protein DDB_G0278111 [Cucumis melo] >XP_011658277.1 DNA-b...	[more]
XP_022925642.1	1.54e-70	96.09	DNA-binding protein DDB_G0278111-like isoform X2 [Cucurbita moschata] >XP_022978...	[more]
XP_022926831.1	2.18e-70	96.09	DNA-binding protein DDB_G0278111-like [Cucurbita moschata] >XP_023003579.1 DNA-b...	[more]

BLAST of MC01g1528 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CKK4	2.70e-73	99.22	DNA-binding protein DDB_G0278111 isoform X1 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A1S3AZB0	3.68e-71	96.88	DNA-binding protein DDB_G0278111 OS=Cucumis melo OX=3656 GN=LOC103484392 PE=3 SV...	[more]
A0A6J1IVC3	7.43e-71	96.09	DNA-binding protein DDB_G0278111-like isoform X2 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1EC84	7.43e-71	96.09	DNA-binding protein DDB_G0278111-like isoform X2 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1KTQ8	1.06e-70	96.09	DNA-binding protein DDB_G0278111-like OS=Cucurbita maxima OX=3661 GN=LOC11149713...	[more]

BLAST of MC01g1528 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29850.1	7.7e-46	83.21	double-stranded DNA-binding family protein	[more]
AT1G29850.2	1.0e-45	82.58	double-stranded DNA-binding family protein	[more]
AT1G29850.3	2.1e-43	80.95	double-stranded DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002836	PDCD5-like	PFAM	PF01984	dsDNA_bind	coord: 9..120 e-value: 4.9E-31 score: 107.3
IPR002836	PDCD5-like	PIRSF	PIRSF015730	TFAR19	coord: 1..128 e-value: 1.1E-37 score: 126.9
IPR002836	PDCD5-like	PANTHER	PTHR10840	PROGRAMMED CELL DEATH PROTEIN 5	coord: 1..126
IPR036883	PDCD5-like superfamily	GENE3D	1.10.8.140		coord: 2..110 e-value: 4.4E-34 score: 118.7
IPR036883	PDCD5-like superfamily	SUPERFAMILY	46950	Double-stranded DNA-binding domain	coord: 9..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	PANTHER	PTHR10840:SF3	BNAA07G07610D PROTEIN	coord: 1..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g1528.1	MC01g1528.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding