MC01g1498 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g1498
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Splicing factor subunit
Location	MC01: 19350915 .. 19351217 (-)
RNA-Seq Expression	MC01g1498
Synteny	MC01g1498

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGCCAGCGATAGATTTAACATCAATTCCCAGCTTGAGCACCTTCAGGCTAAATATGTGGGAACTGGGCATGCTGACTTAAATAGATTGTTAGTTTTCTTATTCCTTCCGAGTCTTGATCTTATATTGCTTTGCATACTAGTTTTCAAGTCTCACTTCACATTCTGTGTGTACAGTGAATGGGCCGTCAATATTCAGCGTGATAGCTATGCATCTTATGTTGGACATTACCCCATCCTAGCATACTTTGCTATATCAGAAAATGAATCTATTGGGAGGGAACGCTACAACTTTATGCAG

mRNA sequence

ATGCAGGCCAGCGATAGATTTAACATCAATTCCCAGCTTGAGCACCTTCAGGCTAAATATGTGGGAACTGGGCATGCTGACTTAAATAGATTTGAATGGGCCGTCAATATTCAGCGTGATAGCTATGCATCTTATGTTGGACATTACCCCATCCTAGCATACTTTGCTATATCAGAAAATGAATCTATTGGGAGGGAACGCTACAACTTTATGCAG

Coding sequence (CDS)

ATGCAGGCCAGCGATAGATTTAACATCAATTCCCAGCTTGAGCACCTTCAGGCTAAATATGTGGGAACTGGGCATGCTGACTTAAATAGATTTGAATGGGCCGTCAATATTCAGCGTGATAGCTATGCATCTTATGTTGGACATTACCCCATCCTAGCATACTTTGCTATATCAGAAAATGAATCTATTGGGAGGGAACGCTACAACTTTATGCAG

Protein sequence

MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAISENESIGRERYNFMQ

Homology

[Close]

BLAST of MC01g1498 vs. ExPASy Swiss-Prot
Match: P58728 (Uncharacterized protein At4g14342 OS=Arabidopsis thaliana OX=3702 GN=At4g14342 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 9.8e-35
Identity = 67/72 (93.06%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAISEN 60
          MQASDRFNINSQLEHLQAKYVGTGHADL+RFEWAVNIQRDSYASY+GHYP+L+YFAI+EN
Sbjct: 1  MQASDRFNINSQLEHLQAKYVGTGHADLSRFEWAVNIQRDSYASYIGHYPMLSYFAIAEN 60

Query: 61 ESIGRERYNFMQ 73
          ESIGRERYNFMQ
Sbjct: 61 ESIGRERYNFMQ 72

[Close]

BLAST of MC01g1498 vs. ExPASy Swiss-Prot
Match: Q9LW64 (Uncharacterized protein At3g23325 OS=Arabidopsis thaliana OX=3702 GN=At3g23325 PE=3 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 2.9e-34
Identity = 66/72 (91.67%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 1  MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAISEN 60
          MQASDRFNINSQLEHLQAKYVGTGHADL+RFEW VNIQRDSYASY+GHYP+L+YFAI+EN
Sbjct: 1  MQASDRFNINSQLEHLQAKYVGTGHADLSRFEWTVNIQRDSYASYIGHYPMLSYFAIAEN 60

Query: 61 ESIGRERYNFMQ 73
          ESIGRERYNFMQ
Sbjct: 61 ESIGRERYNFMQ 72

[Close]

BLAST of MC01g1498 vs. ExPASy Swiss-Prot
Match: Q9VHI4 (Splicing factor 3B subunit 5 OS=Drosophila melanogaster OX=7227 GN=Sf3b5 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.1e-21
Identity = 45/68 (66.18%), Postives = 55/68 (80.88%), Query Frame = 0


Query: 5  DRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAISENESIG 64
          +R+NI+SQLEHLQ+KY+GTGHAD  +FEW  N  RDS ASY+GHY IL YFAI+ENES  
Sbjct: 3  ERYNIHSQLEHLQSKYIGTGHADTTKFEWLTNQHRDSLASYMGHYDILNYFAIAENESKA 62

Query: 65 RERYNFMQ 73
          R R+N M+
Sbjct: 63 RVRFNLME 70

[Close]

BLAST of MC01g1498 vs. ExPASy Swiss-Prot
Match: Q56K13 (Splicing factor 3B subunit 5 OS=Bos taurus OX=9913 GN=SF3B5 PE=3 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 6.2e-21
Identity = 43/69 (62.32%), Postives = 56/69 (81.16%), Query Frame = 0


Query: 4  SDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAISENESI 63
          +DR+ I+SQLEHLQ+KY+GTGHAD  ++EW VN  RDSY SY+GH+ +L YFAI+ENES 
Sbjct: 2  TDRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFAIAENESK 61

Query: 64 GRERYNFMQ 73
           R R+N M+
Sbjct: 62 ARVRFNLME 70

[Close]

BLAST of MC01g1498 vs. ExPASy Swiss-Prot
Match: Q9BWJ5 (Splicing factor 3B subunit 5 OS=Homo sapiens OX=9606 GN=SF3B5 PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 6.2e-21
Identity = 43/69 (62.32%), Postives = 56/69 (81.16%), Query Frame = 0


Query: 4  SDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAISENESI 63
          +DR+ I+SQLEHLQ+KY+GTGHAD  ++EW VN  RDSY SY+GH+ +L YFAI+ENES 
Sbjct: 2  TDRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFAIAENESK 61

Query: 64 GRERYNFMQ 73
           R R+N M+
Sbjct: 62 ARVRFNLME 70

[Close]

BLAST of MC01g1498 vs. NCBI nr
Match: XP_022142036.1 (uncharacterized protein At4g14342-like isoform X1 [Momordica charantia] >XP_022142037.1 uncharacterized protein At4g14342-like isoform X1 [Momordica charantia] >XP_022142038.1 uncharacterized protein At4g14342-like isoform X2 [Momordica charantia])

HSP 1 Score: 149 bits (376), Expect = 4.14e-45
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAISEN 60
          MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAISEN
Sbjct: 1  MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAISEN 60

Query: 61 ESIGRERYNFMQ 72
          ESIGRERYNFMQ
Sbjct: 61 ESIGRERYNFMQ 72

[Close]

BLAST of MC01g1498 vs. NCBI nr
Match: XP_038892845.1 (uncharacterized protein At4g14342 isoform X2 [Benincasa hispida])

HSP 1 Score: 148 bits (373), Expect = 8.60e-45
Identity = 71/72 (98.61%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAISEN 60
          MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAI+EN
Sbjct: 1  MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAIAEN 60

Query: 61 ESIGRERYNFMQ 72
          ESIGRERYNFMQ
Sbjct: 61 ESIGRERYNFMQ 72

[Close]

BLAST of MC01g1498 vs. NCBI nr
Match: RWR96626.1 (Splicing factor 3B subunit 5/RDS3 complex subunit 10 [Cinnamomum micranthum f. kanehirae])

HSP 1 Score: 148 bits (373), Expect = 1.19e-44
Identity = 71/72 (98.61%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAISEN 60
          MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAI+EN
Sbjct: 1  MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAIAEN 60

Query: 61 ESIGRERYNFMQ 72
          ESIGRERYNFMQ
Sbjct: 61 ESIGRERYNFMQ 72

[Close]

BLAST of MC01g1498 vs. NCBI nr
Match: XP_042510368.1 (uncharacterized protein At4g14342 isoform X1 [Macadamia integrifolia] >XP_042510369.1 uncharacterized protein At4g14342 isoform X2 [Macadamia integrifolia] >OVA02374.1 Splicing factor 3B subunit 5/RDS3 complex subunit 10 [Macleaya cordata])

HSP 1 Score: 148 bits (373), Expect = 1.19e-44
Identity = 71/72 (98.61%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAISEN 60
          MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAI+EN
Sbjct: 1  MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAIAEN 60

Query: 61 ESIGRERYNFMQ 72
          ESIGRERYNFMQ
Sbjct: 61 ESIGRERYNFMQ 72

[Close]

BLAST of MC01g1498 vs. NCBI nr
Match: XP_015887858.1 (uncharacterized protein At4g14342 [Ziziphus jujuba] >XP_022925775.1 uncharacterized protein At4g14342 [Cucurbita moschata] >XP_022947444.1 uncharacterized protein At4g14342 isoform X1 [Cucurbita moschata] >XP_022947450.1 uncharacterized protein At4g14342 isoform X2 [Cucurbita moschata] >XP_022974505.1 uncharacterized protein At4g14342 isoform X1 [Cucurbita maxima] >XP_022974506.1 uncharacterized protein At4g14342 isoform X2 [Cucurbita maxima] >XP_022978791.1 uncharacterized protein At4g14342 [Cucurbita maxima] >XP_023521267.1 uncharacterized protein At4g14342 [Cucurbita pepo subsp. pepo] >XP_023539132.1 uncharacterized protein At4g14342 [Cucurbita pepo subsp. pepo] >XP_023543147.1 uncharacterized protein At4g14342 [Cucurbita pepo subsp. pepo] >XP_023919041.1 uncharacterized protein At4g14342 [Quercus suber] >XP_023919042.1 uncharacterized protein At4g14342 [Quercus suber] >XP_030550068.1 uncharacterized protein At4g14342 [Rhodamnia argentea] >XP_030550069.1 uncharacterized protein At4g14342 [Rhodamnia argentea] >XP_030923579.1 uncharacterized protein At4g14342 [Quercus lobata] >XP_031376227.1 uncharacterized protein At4g14342 isoform X2 [Punica granatum] >XP_031376228.1 uncharacterized protein At4g14342 isoform X3 [Punica granatum] >XP_031377923.1 uncharacterized protein At4g14342 isoform X1 [Punica granatum] >XP_031377924.1 uncharacterized protein At4g14342 isoform X2 [Punica granatum] >XP_038892844.1 uncharacterized protein At4g14342 isoform X1 [Benincasa hispida] >KAF3968442.1 hypothetical protein CMV_007664 [Castanea mollissima] >KAG6581380.1 hypothetical protein SDJN03_21382, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028825.1 hypothetical protein SDJN02_10007 [Cucurbita argyrosperma subsp. argyrosperma] >KAG6597361.1 hypothetical protein SDJN03_10541, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034664.1 hypothetical protein SDJN02_04394, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 148 bits (373), Expect = 1.19e-44
Identity = 71/72 (98.61%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAISEN 60
          MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAI+EN
Sbjct: 1  MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAIAEN 60

Query: 61 ESIGRERYNFMQ 72
          ESIGRERYNFMQ
Sbjct: 61 ESIGRERYNFMQ 72

[Close]

BLAST of MC01g1498 vs. ExPASy TrEMBL
Match: A0A6J1CM89 (Splicing factor subunit OS=Momordica charantia OX=3673 GN=LOC111012262 PE=3 SV=1)

HSP 1 Score: 149 bits (376), Expect = 2.00e-45
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAISEN 60
          MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAISEN
Sbjct: 1  MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAISEN 60

Query: 61 ESIGRERYNFMQ 72
          ESIGRERYNFMQ
Sbjct: 61 ESIGRERYNFMQ 72

[Close]

BLAST of MC01g1498 vs. ExPASy TrEMBL
Match: A0A6J1IBJ4 (Splicing factor subunit OS=Cucurbita maxima OX=3661 GN=LOC111473181 PE=3 SV=1)

HSP 1 Score: 148 bits (373), Expect = 5.75e-45
Identity = 71/72 (98.61%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAISEN 60
          MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAI+EN
Sbjct: 1  MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAIAEN 60

Query: 61 ESIGRERYNFMQ 72
          ESIGRERYNFMQ
Sbjct: 61 ESIGRERYNFMQ 72

[Close]

BLAST of MC01g1498 vs. ExPASy TrEMBL
Match: A0A218VSR0 (Splicing factor subunit OS=Punica granatum OX=22663 GN=LOC116191992 PE=3 SV=1)

HSP 1 Score: 148 bits (373), Expect = 5.75e-45
Identity = 71/72 (98.61%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAISEN 60
          MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAI+EN
Sbjct: 1  MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAIAEN 60

Query: 61 ESIGRERYNFMQ 72
          ESIGRERYNFMQ
Sbjct: 61 ESIGRERYNFMQ 72

[Close]

BLAST of MC01g1498 vs. ExPASy TrEMBL
Match: A0A6J1EJ56 (Splicing factor subunit OS=Cucurbita moschata OX=3662 GN=LOC111433082 PE=3 SV=1)

HSP 1 Score: 148 bits (373), Expect = 5.75e-45
Identity = 71/72 (98.61%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAISEN 60
          MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAI+EN
Sbjct: 1  MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAIAEN 60

Query: 61 ESIGRERYNFMQ 72
          ESIGRERYNFMQ
Sbjct: 61 ESIGRERYNFMQ 72

[Close]

BLAST of MC01g1498 vs. ExPASy TrEMBL
Match: A0A6P4A3S7 (Splicing factor subunit OS=Ziziphus jujuba OX=326968 GN=LOC107422867 PE=3 SV=1)

HSP 1 Score: 148 bits (373), Expect = 5.75e-45
Identity = 71/72 (98.61%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAISEN 60
          MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAI+EN
Sbjct: 1  MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAIAEN 60

Query: 61 ESIGRERYNFMQ 72
          ESIGRERYNFMQ
Sbjct: 61 ESIGRERYNFMQ 72

[Close]

BLAST of MC01g1498 vs. TAIR 10
Match: AT4G14342.1 (Splicing factor 3B subunit 5/RDS3 complex subunit 10 )

HSP 1 Score: 146.7 bits (369), Expect = 7.0e-36
Identity = 67/72 (93.06%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAISEN 60
          MQASDRFNINSQLEHLQAKYVGTGHADL+RFEWAVNIQRDSYASY+GHYP+L+YFAI+EN
Sbjct: 1  MQASDRFNINSQLEHLQAKYVGTGHADLSRFEWAVNIQRDSYASYIGHYPMLSYFAIAEN 60

Query: 61 ESIGRERYNFMQ 73
          ESIGRERYNFMQ
Sbjct: 61 ESIGRERYNFMQ 72

[Close]

BLAST of MC01g1498 vs. TAIR 10
Match: AT3G23325.1 (Splicing factor 3B subunit 5/RDS3 complex subunit 10 )

HSP 1 Score: 145.2 bits (365), Expect = 2.0e-35
Identity = 66/72 (91.67%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 1  MQASDRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYVGHYPILAYFAISEN 60
          MQASDRFNINSQLEHLQAKYVGTGHADL+RFEW VNIQRDSYASY+GHYP+L+YFAI+EN
Sbjct: 1  MQASDRFNINSQLEHLQAKYVGTGHADLSRFEWTVNIQRDSYASYIGHYPMLSYFAIAEN 60

Query: 61 ESIGRERYNFMQ 73
          ESIGRERYNFMQ
Sbjct: 61 ESIGRERYNFMQ 72

The following BLAST results are available for this feature:

BLAST of MC01g1498 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P58728	9.8e-35	93.06	Uncharacterized protein At4g14342 OS=Arabidopsis thaliana OX=3702 GN=At4g14342 P...	[more]
Q9LW64	2.9e-34	91.67	Uncharacterized protein At3g23325 OS=Arabidopsis thaliana OX=3702 GN=At3g23325 P...	[more]
Q9VHI4	2.1e-21	66.18	Splicing factor 3B subunit 5 OS=Drosophila melanogaster OX=7227 GN=Sf3b5 PE=1 SV...	[more]
Q56K13	6.2e-21	62.32	Splicing factor 3B subunit 5 OS=Bos taurus OX=9913 GN=SF3B5 PE=3 SV=1	[more]
Q9BWJ5	6.2e-21	62.32	Splicing factor 3B subunit 5 OS=Homo sapiens OX=9606 GN=SF3B5 PE=1 SV=1	[more]

BLAST of MC01g1498 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142036.1	4.14e-45	100.00	uncharacterized protein At4g14342-like isoform X1 [Momordica charantia] >XP_0221...	[more]
XP_038892845.1	8.60e-45	98.61	uncharacterized protein At4g14342 isoform X2 [Benincasa hispida]	[more]
RWR96626.1	1.19e-44	98.61	Splicing factor 3B subunit 5/RDS3 complex subunit 10 [Cinnamomum micranthum f. k...	[more]
XP_042510368.1	1.19e-44	98.61	uncharacterized protein At4g14342 isoform X1 [Macadamia integrifolia] >XP_042510...	[more]
XP_015887858.1	1.19e-44	98.61	uncharacterized protein At4g14342 [Ziziphus jujuba] >XP_022925775.1 uncharacteri...	[more]

BLAST of MC01g1498 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CM89	2.00e-45	100.00	Splicing factor subunit OS=Momordica charantia OX=3673 GN=LOC111012262 PE=3 SV=1	[more]
A0A6J1IBJ4	5.75e-45	98.61	Splicing factor subunit OS=Cucurbita maxima OX=3661 GN=LOC111473181 PE=3 SV=1	[more]
A0A218VSR0	5.75e-45	98.61	Splicing factor subunit OS=Punica granatum OX=22663 GN=LOC116191992 PE=3 SV=1	[more]
A0A6J1EJ56	5.75e-45	98.61	Splicing factor subunit OS=Cucurbita moschata OX=3662 GN=LOC111433082 PE=3 SV=1	[more]
A0A6P4A3S7	5.75e-45	98.61	Splicing factor subunit OS=Ziziphus jujuba OX=326968 GN=LOC107422867 PE=3 SV=1	[more]

BLAST of MC01g1498 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14342.1	7.0e-36	93.06	Splicing factor 3B subunit 5/RDS3 complex subunit 10	[more]
AT3G23325.1	2.0e-35	91.67	Splicing factor 3B subunit 5/RDS3 complex subunit 10	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009846	Splicing factor 3B subunit 5/RDS3 complex subunit 10	PFAM	PF07189	SF3b10	coord: 5..72 e-value: 6.8E-31 score: 106.2
IPR009846	Splicing factor 3B subunit 5/RDS3 complex subunit 10	PANTHER	PTHR20978	SPLICING FACTOR 3B SUBUNIT 5	coord: 2..72
IPR017089	Splicing factor 3B, subunit 5	PIRSF	PIRSF037010	SF3B5	coord: 1..72 e-value: 6.9E-33 score: 110.6
None	No IPR available	PANTHER	PTHR20978:SF3	SPLICING FACTOR SUBUNIT	coord: 2..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g1498.1	MC01g1498.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071011	precatalytic spliceosome
cellular_component	GO:0005686	U2 snRNP