MC01g1453 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g1453
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Ethylene-responsive transcription factor, putative
Location	MC01: 19023951 .. 19024423 (+)
RNA-Seq Expression	MC01g1453
Synteny	MC01g1453

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCAATCGGATTTGCCTTTTAATGAGAACGATTCTCAAGACATGGTCATTTACCAAGTTCTAAACGAGGCCATGGCGTCCCGCAACTCCCCTCTTCCCCCCGCCGCCGGACACCCCATTCCACCCGCCGTAACCATTGCCAAGAAGCACTACAGGGGCGTCCGCCGCCGCCCCTGGGGCAAGTACGCCGCCGAGATACGCGACACGGCGCGCGCGTCTGGCTTGGCACCTTCGCCACCGCCGAGGAGGCCGCTCTGGCTTATGATAGAGCTGCTTTCCAGATGAGAGGACCCAAAGCCCTCCTGAATTTCCCGCCGGAGGTCGCGGCGGCGGCAGCGGCTTCGGCTTCTACGCCGGCGACGACTTCTACGCCGGCCAAGAGGAAGCATAAGGCTGCGCCGAGTGGTGATTGCAGCTCCACCGCTGTTTCGGTGGCGAATTCACGATCAGAATCGGATAGCAGCGCAGCTGAA

mRNA sequence

TCCCAATCGGATTTGCCTTTTAATGAGAACGATTCTCAAGACATGGTCATTTACCAAGTTCTAAACGAGGCCATGGCGTCCCGCAACTCCCCTCTTCCCCCCGCCGCCGGACACCCCATTCCACCCGCCGTAACCATTGCCAAGAAGCACTACAGGGGCGTCCGCCGCCGCCCCTGGGGCAAGTACGCCGCCGAGACGCGACACGGCGCGCGCGTCTGGCTTGGCACCTTCGCCACCGCCGAGGAGGCCGCTCTGGCTTATGATAGAGCTGCTTTCCAGATGAGAGGACCCAAAGCCCTCCTGAATTTCCCGCCGGAGGTCGCGGCGGCGGCAGCGGCTTCGGCTTCTACGCCGGCGACGACTTCTACGCCGGCCAAGAGGAAGCATAAGGCTGCGCCGAGTGGTGATTGCAGCTCCACCGCTGTTTCGGTGGCGAATTCACGATCAGAATCGGATAGCAGCGCAGCTGAA

Coding sequence (CDS)

TCCCAATCGGATTTGCCTTTTAATGAGAACGATTCTCAAGACATGGTCATTTACCAAGTTCTAAACGAGGCCATGGCGTCCCGCAACTCCCCTCTTCCCCCCGCCGCCGGACACCCCATTCCACCCGCCGTAACCATTGCCAAGAAGCACTACAGGGGCGTCCGCCGCCGCCCCTGGGGCAAGTACGCCGCCGAGACGCGACACGGCGCGCGCGTCTGGCTTGGCACCTTCGCCACCGCCGAGGAGGCCGCTCTGGCTTATGATAGAGCTGCTTTCCAGATGAGAGGACCCAAAGCCCTCCTGAATTTCCCGCCGGAGGTCGCGGCGGCGGCAGCGGCTTCGGCTTCTACGCCGGCGACGACTTCTACGCCGGCCAAGAGGAAGCATAAGGCTGCGCCGAGTGGTGATTGCAGCTCCACCGCTGTTTCGGTGGCGAATTCACGATCAGAATCGGATAGCAGCGCAGCTGAA

Protein sequence

SQSDLPFNENDSQDMVIYQVLNEAMASRNSPLPPAAGHPIPPAVTIAKKHYRGVRRRPWGKYAAETRHGARVWLGTFATAEEAALAYDRAAFQMRGPKALLNFPPEVAAAAAASASTPATTSTPAKRKHKAAPSGDCSSTAVSVANSRSESDSSAAE

Homology

[Close]

BLAST of MC01g1453 vs. ExPASy Swiss-Prot
Match: O04681 (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum OX=4081 GN=PTI5 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.5e-29
Identity = 85/157 (54.14%), Postives = 99/157 (63.06%), Query Frame = 0


Query: 2   QSDLPFNENDSQDMVIYQVLNEAMASRNSPLPPAAGHPIP------PAVTIAKKHYRGVR 61
           QSDLP NENDSQ+MV+Y+VLNEA A  N P  P     +P      P   I KK YRGVR
Sbjct: 6   QSDLPLNENDSQEMVLYEVLNEANA-LNIPYLPQRNQLLPRNNILRPLQCIGKK-YRGVR 65

Query: 62  RRPWGKYAAE----TRHGARVWLGTFATAEEAALAYDRAAFQMRGPKALLNFPPEVAAAA 121
           RRPWGKYAAE     RHGARVWLGTF TAEEAALAYDRAAF+MRG KALLNFP E+  A+
Sbjct: 66  RRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFPSEIVNAS 125

Query: 122 AASASTPATTSTPAKRKHKAAPSGDCSSTAVSVANSR 149
            +       +++     +  +   + SS    V  SR
Sbjct: 126 VSVDKLSLCSNSYTTNNNSDSSLNEVSSGTNDVFESR 160

[Close]

BLAST of MC01g1453 vs. ExPASy Swiss-Prot
Match: Q8L9K1 (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=ERF13 PE=1 SV=2)

HSP 1 Score: 112.8 bits (281), Expect = 3.4e-24
Identity = 64/118 (54.24%), Postives = 77/118 (65.25%), Query Frame = 0


Query: 3   SDLPFNENDSQDMVIYQVLNEAMASRNSPLPPAAGHPI----PPAVTIAKKH-------- 62
           SDLP + +DSQDM IY  L +A++S  +P  P    P     PPA   +  H        
Sbjct: 32  SDLPLSVDDSQDMAIYNTLRDAVSSGWTPSVPPVTSPAEENKPPATKASGSHAPRQKGMQ 91

Query: 63  YRGVRRRPWGKYAAETR----HGARVWLGTFATAEEAALAYDRAAFQMRGPKALLNFP 105
           YRGVRRRPWGK+AAE R    +GARVWLGT+ T E+AA+AYDRAAFQ+RG KA LNFP
Sbjct: 92  YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFP 149

[Close]

BLAST of MC01g1453 vs. ExPASy Swiss-Prot
Match: O80337 (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana OX=3702 GN=ERF1A PE=1 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 1.0e-23
Identity = 78/179 (43.58%), Postives = 96/179 (53.63%), Query Frame = 0


Query: 1   SQSDLPFNENDSQDMVIYQVLNEAM------------------------------ASRNS 60
           S  DLP  ENDS+DM++Y +LN+A                               A  + 
Sbjct: 67  SWGDLPLKENDSEDMLVYGILNDAFHGGWEPSSSSSDEDRSSFPSVKIETPESFAAVDSV 126

Query: 61  PLPPAAGHPIPPAVTIAK-KHYRGVRRRPWGKYAAETR----HGARVWLGTFATAEEAAL 120
           P+      P+  AVT AK KHYRGVR+RPWGK+AAE R    +GARVWLGTF TAE+AAL
Sbjct: 127 PVKKEKTSPVSAAVTAAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAAL 186

Query: 121 AYDRAAFQMRGPKALLNFP---------PEVAAAAAASASTPATTSTPAKRKHKAAPSG 136
           AYDRAAF+MRG +ALLNFP         P    +  +S S+      P KR+  AA  G
Sbjct: 187 AYDRAAFRMRGSRALLNFPLRVNSGEPDPVRIKSKRSSFSSSNENGAPKKRRTVAAGGG 245

[Close]

BLAST of MC01g1453 vs. ExPASy Swiss-Prot
Match: A0A3Q7I5Y9 (Ethylene-response factor C3 OS=Solanum lycopersicum OX=4081 GN=ERF.C.3 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.2e-22
Identity = 58/113 (51.33%), Postives = 74/113 (65.49%), Query Frame = 0


Query: 3   SDLPFNENDSQDMVIYQVLNEAMASRNSPLPPAAGHPIPPAVTIAK----KHYRGVRRRP 62
           + LPFN ND+QDM++Y ++ E  +        + G       +  +    K+YRGVR+RP
Sbjct: 14  NSLPFNVNDTQDMLLYNLVAEGSSQETVNSSSSYGIKEEEVTSYEEERKDKNYRGVRKRP 73

Query: 63  WGKYAAE----TRHGARVWLGTFATAEEAALAYDRAAFQMRGPKALLNFPPEV 108
           WGKYAAE    TR+G RVWLGTF  AEEAALAYD+AAF MRG  A+LNFP E+
Sbjct: 74  WGKYAAEIRDSTRNGVRVWLGTFDNAEEAALAYDQAAFAMRGSMAILNFPVEI 126

[Close]

BLAST of MC01g1453 vs. ExPASy Swiss-Prot
Match: Q8LDC8 (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=ERF1B PE=1 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 2.7e-21
Identity = 57/113 (50.44%), Postives = 75/113 (66.37%), Query Frame = 0


Query: 5   LPFNENDSQDMVIYQVLNEAMA-------SRNSPLPPAAGHPIPPAVTIAKKHYRGVRRR 64
           LPFNENDS++M +Y ++ ++         S++ P+   +          ++K YRGVRRR
Sbjct: 36  LPFNENDSEEMFLYGLIEQSTQQTYIDSDSQDLPIKSVSSRK-------SEKSYRGVRRR 95

Query: 65  PWGKYAAE----TRHGARVWLGTFATAEEAALAYDRAAFQMRGPKALLNFPPE 107
           PWGK+AAE    TR+G RVWLGTF +AEEAALAYD+AAF MRG  A+LNF  E
Sbjct: 96  PWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAFSMRGSSAILNFSAE 141

[Close]

BLAST of MC01g1453 vs. NCBI nr
Match: XP_022142251.1 (LOW QUALITY PROTEIN: pathogenesis-related genes transcriptional activator PTI5-like [Momordica charantia])

HSP 1 Score: 289 bits (740), Expect = 4.84e-98
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   SQSDLPFNENDSQDMVIYQVLNEAMASRNSPLPPAAGHPIPPAVTIAKKHYRGVRRRPWG 60
           SQSDLPFNENDSQDMVIYQVLNEAMASRNSPLPPAAGHPIPPAVTIAKKHYRGVRRRPWG
Sbjct: 5   SQSDLPFNENDSQDMVIYQVLNEAMASRNSPLPPAAGHPIPPAVTIAKKHYRGVRRRPWG 64

Query: 61  KYAAE-TRHGARVWLGTFATAEEAALAYDRAAFQMRGPKALLNFPPEVAAAAAASASTPA 120
           KYAAE TRHGARVWLGTFATAEEAALAYDRAAFQMRGPKALLNFPPEVAAAAAASASTPA
Sbjct: 65  KYAAEXTRHGARVWLGTFATAEEAALAYDRAAFQMRGPKALLNFPPEVAAAAAASASTPA 124

Query: 121 TTSTPAKRKHKAAPSGDCSSTAVSVANSRSESDSSAAE 157
           TTSTPAKRKHKAAPSGDCSSTAVSVANSRSESDSSAAE
Sbjct: 125 TTSTPAKRKHKAAPSGDCSSTAVSVANSRSESDSSAAE 162

[Close]

BLAST of MC01g1453 vs. NCBI nr
Match: KAA0052648.1 (pathogenesis-related genes transcriptional activator PTI5-like [Cucumis melo var. makuwa] >TYK13178.1 pathogenesis-related genes transcriptional activator PTI5-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 196 bits (499), Expect = 3.54e-61
Identity = 122/168 (72.62%), Postives = 131/168 (77.98%), Query Frame = 0


Query: 2   QSDLPFNENDSQDMVIYQVLNEAMASRNSPLPPAAGHPI--------PPAVTIAKKHYRG 61
           Q+DLPFNENDSQDMVIYQVLN  M+S +S LPPA   P         PPA TIAKKHYRG
Sbjct: 9   QADLPFNENDSQDMVIYQVLNSPMSS-HSTLPPADDQPNANSSRRLNPPARTIAKKHYRG 68

Query: 62  VRRRPWGKYAAE----TRHGARVWLGTFATAEEAALAYDRAAFQMRGPKALLNFPPEVAA 121
           VR+RPWGKYAAE    TRHGARVWLGTFATAEEAALAYD AAF+MRGPKALLNFPPEV A
Sbjct: 69  VRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFRMRGPKALLNFPPEVVA 128

Query: 122 AAAASASTPATTSTPAKRKHKAAPSGDCSSTAVSVANSRSESDSSAAE 157
           AAAA+A T  TTS P+KRK  A P G  SST +S+A SRSESD SA E
Sbjct: 129 AAAAAAKT-TTTSPPSKRKPNAEPWGSSSST-ISLATSRSESDCSAPE 173

[Close]

BLAST of MC01g1453 vs. NCBI nr
Match: XP_008439787.1 (PREDICTED: pathogenesis-related genes transcriptional activator PTI5-like [Cucumis melo])

HSP 1 Score: 192 bits (488), Expect = 1.61e-59
Identity = 120/168 (71.43%), Postives = 130/168 (77.38%), Query Frame = 0


Query: 2   QSDLPFNENDSQDMVIYQVLNEAMASRNSPLPPAAGHPI--------PPAVTIAKKHYRG 61
           Q+ LPFNENDSQDMVIYQVLN  M+S +S LPPA   P         PPA TIAKKHYRG
Sbjct: 9   QAGLPFNENDSQDMVIYQVLNSPMSS-HSTLPPADDQPNANSSRRLNPPARTIAKKHYRG 68

Query: 62  VRRRPWGKYAAE----TRHGARVWLGTFATAEEAALAYDRAAFQMRGPKALLNFPPEVAA 121
           VR+RPWGKYAAE    TRHGARVWLGTFATAEEAALAYD AAF+MRGPKALLNFPPEV A
Sbjct: 69  VRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFRMRGPKALLNFPPEVVA 128

Query: 122 AAAASASTPATTSTPAKRKHKAAPSGDCSSTAVSVANSRSESDSSAAE 157
           AAAA+ +T  TTS P+KRK  A P G  SST +S+A SRSESD SA E
Sbjct: 129 AAAAAKTT--TTSPPSKRKPNAEPWGSSSST-ISLATSRSESDCSAPE 172

[Close]

BLAST of MC01g1453 vs. NCBI nr
Match: XP_004134941.2 (pathogenesis-related genes transcriptional activator PTI5 [Cucumis sativus])

HSP 1 Score: 182 bits (463), Expect = 1.19e-55
Identity = 117/175 (66.86%), Postives = 129/175 (73.71%), Query Frame = 0


Query: 1   SQSDLPFNENDSQDMVIYQVLNEAMASRNSPLPPA-------------AGHPI-PPAVTI 60
           +QSDLPFNENDS+DMVIYQVLN  M+S +S LP A             A H + PPA TI
Sbjct: 7   AQSDLPFNENDSEDMVIYQVLNSPMSS-HSTLPAADDQPNANANANANASHRLNPPARTI 66

Query: 61  AKKHYRGVRRRPWGKYAAE----TRHGARVWLGTFATAEEAALAYDRAAFQMRGPKALLN 120
           AKKHYRGVR+RPWGKYAAE    TRHGARVWLGTFATAEEAALAYD AAF MRG KALLN
Sbjct: 67  AKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFTMRGSKALLN 126

Query: 121 FPPEVAAAAAASASTPATTSTPAKRKHKAAPSGDCSSTAVSVANSRSESDSSAAE 157
           FPPEV AAAAA+ +T  TTS P+KRK    P G  SST +S+A SR+ESD  A E
Sbjct: 127 FPPEVVAAAAAAKTT--TTSPPSKRKPNVEPCGSSSST-ISLATSRTESDCKAPE 177

[Close]

BLAST of MC01g1453 vs. NCBI nr
Match: KAE8647706.1 (hypothetical protein Csa_003722 [Cucumis sativus])

HSP 1 Score: 182 bits (463), Expect = 2.17e-55
Identity = 117/175 (66.86%), Postives = 129/175 (73.71%), Query Frame = 0


Query: 1   SQSDLPFNENDSQDMVIYQVLNEAMASRNSPLPPA-------------AGHPI-PPAVTI 60
           +QSDLPFNENDS+DMVIYQVLN  M+S +S LP A             A H + PPA TI
Sbjct: 26  AQSDLPFNENDSEDMVIYQVLNSPMSS-HSTLPAADDQPNANANANANASHRLNPPARTI 85

Query: 61  AKKHYRGVRRRPWGKYAAE----TRHGARVWLGTFATAEEAALAYDRAAFQMRGPKALLN 120
           AKKHYRGVR+RPWGKYAAE    TRHGARVWLGTFATAEEAALAYD AAF MRG KALLN
Sbjct: 86  AKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFTMRGSKALLN 145

Query: 121 FPPEVAAAAAASASTPATTSTPAKRKHKAAPSGDCSSTAVSVANSRSESDSSAAE 157
           FPPEV AAAAA+ +T  TTS P+KRK    P G  SST +S+A SR+ESD  A E
Sbjct: 146 FPPEVVAAAAAAKTT--TTSPPSKRKPNVEPCGSSSST-ISLATSRTESDCKAPE 196

[Close]

BLAST of MC01g1453 vs. ExPASy TrEMBL
Match: A0A6J1CLN0 (LOW QUALITY PROTEIN: pathogenesis-related genes transcriptional activator PTI5-like OS=Momordica charantia OX=3673 GN=LOC111012413 PE=4 SV=1)

HSP 1 Score: 289 bits (740), Expect = 2.34e-98
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   SQSDLPFNENDSQDMVIYQVLNEAMASRNSPLPPAAGHPIPPAVTIAKKHYRGVRRRPWG 60
           SQSDLPFNENDSQDMVIYQVLNEAMASRNSPLPPAAGHPIPPAVTIAKKHYRGVRRRPWG
Sbjct: 5   SQSDLPFNENDSQDMVIYQVLNEAMASRNSPLPPAAGHPIPPAVTIAKKHYRGVRRRPWG 64

Query: 61  KYAAE-TRHGARVWLGTFATAEEAALAYDRAAFQMRGPKALLNFPPEVAAAAAASASTPA 120
           KYAAE TRHGARVWLGTFATAEEAALAYDRAAFQMRGPKALLNFPPEVAAAAAASASTPA
Sbjct: 65  KYAAEXTRHGARVWLGTFATAEEAALAYDRAAFQMRGPKALLNFPPEVAAAAAASASTPA 124

Query: 121 TTSTPAKRKHKAAPSGDCSSTAVSVANSRSESDSSAAE 157
           TTSTPAKRKHKAAPSGDCSSTAVSVANSRSESDSSAAE
Sbjct: 125 TTSTPAKRKHKAAPSGDCSSTAVSVANSRSESDSSAAE 162

[Close]

BLAST of MC01g1453 vs. ExPASy TrEMBL
Match: A0A5D3CPS3 (Pathogenesis-related genes transcriptional activator PTI5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007900 PE=4 SV=1)

HSP 1 Score: 196 bits (499), Expect = 1.71e-61
Identity = 122/168 (72.62%), Postives = 131/168 (77.98%), Query Frame = 0


Query: 2   QSDLPFNENDSQDMVIYQVLNEAMASRNSPLPPAAGHPI--------PPAVTIAKKHYRG 61
           Q+DLPFNENDSQDMVIYQVLN  M+S +S LPPA   P         PPA TIAKKHYRG
Sbjct: 9   QADLPFNENDSQDMVIYQVLNSPMSS-HSTLPPADDQPNANSSRRLNPPARTIAKKHYRG 68

Query: 62  VRRRPWGKYAAE----TRHGARVWLGTFATAEEAALAYDRAAFQMRGPKALLNFPPEVAA 121
           VR+RPWGKYAAE    TRHGARVWLGTFATAEEAALAYD AAF+MRGPKALLNFPPEV A
Sbjct: 69  VRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFRMRGPKALLNFPPEVVA 128

Query: 122 AAAASASTPATTSTPAKRKHKAAPSGDCSSTAVSVANSRSESDSSAAE 157
           AAAA+A T  TTS P+KRK  A P G  SST +S+A SRSESD SA E
Sbjct: 129 AAAAAAKT-TTTSPPSKRKPNAEPWGSSSST-ISLATSRSESDCSAPE 173

[Close]

BLAST of MC01g1453 vs. ExPASy TrEMBL
Match: A0A1S3AZ58 (pathogenesis-related genes transcriptional activator PTI5-like OS=Cucumis melo OX=3656 GN=LOC103484478 PE=4 SV=1)

HSP 1 Score: 192 bits (488), Expect = 7.81e-60
Identity = 120/168 (71.43%), Postives = 130/168 (77.38%), Query Frame = 0


Query: 2   QSDLPFNENDSQDMVIYQVLNEAMASRNSPLPPAAGHPI--------PPAVTIAKKHYRG 61
           Q+ LPFNENDSQDMVIYQVLN  M+S +S LPPA   P         PPA TIAKKHYRG
Sbjct: 9   QAGLPFNENDSQDMVIYQVLNSPMSS-HSTLPPADDQPNANSSRRLNPPARTIAKKHYRG 68

Query: 62  VRRRPWGKYAAE----TRHGARVWLGTFATAEEAALAYDRAAFQMRGPKALLNFPPEVAA 121
           VR+RPWGKYAAE    TRHGARVWLGTFATAEEAALAYD AAF+MRGPKALLNFPPEV A
Sbjct: 69  VRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFRMRGPKALLNFPPEVVA 128

Query: 122 AAAASASTPATTSTPAKRKHKAAPSGDCSSTAVSVANSRSESDSSAAE 157
           AAAA+ +T  TTS P+KRK  A P G  SST +S+A SRSESD SA E
Sbjct: 129 AAAAAKTT--TTSPPSKRKPNAEPWGSSSST-ISLATSRSESDCSAPE 172

[Close]

BLAST of MC01g1453 vs. ExPASy TrEMBL
Match: A0A0A0KKA5 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G518290 PE=4 SV=1)

HSP 1 Score: 182 bits (463), Expect = 5.77e-56
Identity = 117/175 (66.86%), Postives = 129/175 (73.71%), Query Frame = 0


Query: 1   SQSDLPFNENDSQDMVIYQVLNEAMASRNSPLPPA-------------AGHPI-PPAVTI 60
           +QSDLPFNENDS+DMVIYQVLN  M+S +S LP A             A H + PPA TI
Sbjct: 7   AQSDLPFNENDSEDMVIYQVLNSPMSS-HSTLPAADDQPNANANANANASHRLNPPARTI 66

Query: 61  AKKHYRGVRRRPWGKYAAE----TRHGARVWLGTFATAEEAALAYDRAAFQMRGPKALLN 120
           AKKHYRGVR+RPWGKYAAE    TRHGARVWLGTFATAEEAALAYD AAF MRG KALLN
Sbjct: 67  AKKHYRGVRQRPWGKYAAEIRDSTRHGARVWLGTFATAEEAALAYDTAAFTMRGSKALLN 126

Query: 121 FPPEVAAAAAASASTPATTSTPAKRKHKAAPSGDCSSTAVSVANSRSESDSSAAE 157
           FPPEV AAAAA+ +T  TTS P+KRK    P G  SST +S+A SR+ESD  A E
Sbjct: 127 FPPEVVAAAAAAKTT--TTSPPSKRKPNVEPCGSSSST-ISLATSRTESDCKAPE 177

[Close]

BLAST of MC01g1453 vs. ExPASy TrEMBL
Match: A0A6J1EGD9 (pathogenesis-related genes transcriptional activator PTI5-like OS=Cucurbita moschata OX=3662 GN=LOC111433931 PE=4 SV=1)

HSP 1 Score: 175 bits (443), Expect = 4.05e-53
Identity = 114/170 (67.06%), Postives = 121/170 (71.18%), Query Frame = 0


Query: 1   SQSDLPFNENDSQDMVIYQVLNEAMASRNSPLPPAAGHPIPPAVT---------IAKKHY 60
           S SDLPFNENDSQDMVIYQVLN+ M+S NS   P+A  P   A           IAKKHY
Sbjct: 5   SHSDLPFNENDSQDMVIYQVLNQPMSSHNSTTLPSADQPNTNAAARHHNSAAGGIAKKHY 64

Query: 61  RGVRRRPWGKYAAE----TRHGARVWLGTFATAEEAALAYDRAAFQMRGPKALLNFPPEV 120
           RGVRRRPWGKYAAE    TR G RVWLGTFATAEEAALAYDRAAF MRGPKALLNFPPEV
Sbjct: 65  RGVRRRPWGKYAAEIRDSTRQGVRVWLGTFATAEEAALAYDRAAFNMRGPKALLNFPPEV 124

Query: 121 AAAAAASASTPATTSTPAKRKHKAAPSGDCSSTAVSVANSRSESDSSAAE 157
            AAAAA+ +T   T+TP        PSG  SST VS+A SRSES   AAE
Sbjct: 125 VAAAAAADTT---TTTPP-------PSGSSSST-VSMATSRSESVRRAAE 163

[Close]

BLAST of MC01g1453 vs. TAIR 10
Match: AT2G44840.1 (ethylene-responsive element binding factor 13 )

HSP 1 Score: 112.8 bits (281), Expect = 2.4e-25
Identity = 64/118 (54.24%), Postives = 77/118 (65.25%), Query Frame = 0


Query: 3   SDLPFNENDSQDMVIYQVLNEAMASRNSPLPPAAGHPI----PPAVTIAKKH-------- 62
           SDLP + +DSQDM IY  L +A++S  +P  P    P     PPA   +  H        
Sbjct: 32  SDLPLSVDDSQDMAIYNTLRDAVSSGWTPSVPPVTSPAEENKPPATKASGSHAPRQKGMQ 91

Query: 63  YRGVRRRPWGKYAAETR----HGARVWLGTFATAEEAALAYDRAAFQMRGPKALLNFP 105
           YRGVRRRPWGK+AAE R    +GARVWLGT+ T E+AA+AYDRAAFQ+RG KA LNFP
Sbjct: 92  YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFP 149

[Close]

BLAST of MC01g1453 vs. TAIR 10
Match: AT4G17500.1 (ethylene responsive element binding factor 1 )

HSP 1 Score: 111.3 bits (277), Expect = 7.1e-25
Identity = 78/179 (43.58%), Postives = 96/179 (53.63%), Query Frame = 0


Query: 1   SQSDLPFNENDSQDMVIYQVLNEAM------------------------------ASRNS 60
           S  DLP  ENDS+DM++Y +LN+A                               A  + 
Sbjct: 67  SWGDLPLKENDSEDMLVYGILNDAFHGGWEPSSSSSDEDRSSFPSVKIETPESFAAVDSV 126

Query: 61  PLPPAAGHPIPPAVTIAK-KHYRGVRRRPWGKYAAETR----HGARVWLGTFATAEEAAL 120
           P+      P+  AVT AK KHYRGVR+RPWGK+AAE R    +GARVWLGTF TAE+AAL
Sbjct: 127 PVKKEKTSPVSAAVTAAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAAL 186

Query: 121 AYDRAAFQMRGPKALLNFP---------PEVAAAAAASASTPATTSTPAKRKHKAAPSG 136
           AYDRAAF+MRG +ALLNFP         P    +  +S S+      P KR+  AA  G
Sbjct: 187 AYDRAAFRMRGSRALLNFPLRVNSGEPDPVRIKSKRSSFSSSNENGAPKKRRTVAAGGG 245

[Close]

BLAST of MC01g1453 vs. TAIR 10
Match: AT3G23240.1 (ethylene response factor 1 )

HSP 1 Score: 103.2 bits (256), Expect = 1.9e-22
Identity = 57/113 (50.44%), Postives = 75/113 (66.37%), Query Frame = 0


Query: 5   LPFNENDSQDMVIYQVLNEAMA-------SRNSPLPPAAGHPIPPAVTIAKKHYRGVRRR 64
           LPFNENDS++M +Y ++ ++         S++ P+   +          ++K YRGVRRR
Sbjct: 36  LPFNENDSEEMFLYGLIEQSTQQTYIDSDSQDLPIKSVSSRK-------SEKSYRGVRRR 95

Query: 65  PWGKYAAE----TRHGARVWLGTFATAEEAALAYDRAAFQMRGPKALLNFPPE 107
           PWGK+AAE    TR+G RVWLGTF +AEEAALAYD+AAF MRG  A+LNF  E
Sbjct: 96  PWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAFSMRGSSAILNFSAE 141

[Close]

BLAST of MC01g1453 vs. TAIR 10
Match: AT5G47220.1 (ethylene responsive element binding factor 2 )

HSP 1 Score: 101.3 bits (251), Expect = 7.3e-22
Identity = 73/174 (41.95%), Postives = 95/174 (54.60%), Query Frame = 0


Query: 1   SQSDLPFNENDSQDMVIYQVLNEAMASRNS--------PLPPAAGHP------------- 60
           S   LP  ENDS+DM++Y +L +A     S          P     P             
Sbjct: 44  SWGGLPLKENDSEDMLVYGLLKDAFHFDTSSSDLSCLFDFPAVKVEPTENFTAMEEKPKK 103

Query: 61  -IPPAVTIAK-KHYRGVRRRPWGKYAAETR----HGARVWLGTFATAEEAALAYDRAAFQ 120
            IP   T  K KHYRGVR+RPWGK+AAE R    +GARVWLGTF TAE+AALAYD AAF+
Sbjct: 104 AIPVTETAVKAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFR 163

Query: 121 MRGPKALLNFPPEV----------------AAAAAASASTPATTSTPAKRKHKA 132
           MRG +ALLNFP  V                ++++++S+ST ++ +   KR+ KA
Sbjct: 164 MRGSRALLNFPLRVNSGEPDPVRITSKRSSSSSSSSSSSTSSSENGKLKRRRKA 217

[Close]

BLAST of MC01g1453 vs. TAIR 10
Match: AT4G17490.1 (ethylene responsive element binding factor 6 )

HSP 1 Score: 94.7 bits (234), Expect = 6.8e-20
Identity = 61/126 (48.41%), Postives = 74/126 (58.73%), Query Frame = 0


Query: 2   QSDLPFNENDSQDMVIYQVLNEAMASRNSPL---PP--------AAGHPIP--PAVTIA- 61
           +S++P   NDS             ++R  PL   PP        A G+P P  P   +A 
Sbjct: 72  KSEIPSESNDSFTFQSNPPRVTVQSNRKPPLKIAPPNRTKWIQFATGNPKPELPVPVVAA 131

Query: 62  --KKHYRGVRRRPWGKYAAE----TRHGARVWLGTFATAEEAALAYDRAAFQMRGPKALL 108
             K+HYRGVR RPWGK+AAE    TR G RVWLGTF TA EAA AYD+ AF++RG KA+L
Sbjct: 132 EEKRHYRGVRMRPWGKFAAEIRDPTRRGTRVWLGTFETAIEAARAYDKEAFRLRGSKAIL 191

The following BLAST results are available for this feature:

BLAST of MC01g1453 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04681	3.5e-29	54.14	Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicu...	[more]
Q8L9K1	3.4e-24	54.24	Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
O80337	1.0e-23	43.58	Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
A0A3Q7I5Y9	3.2e-22	51.33	Ethylene-response factor C3 OS=Solanum lycopersicum OX=4081 GN=ERF.C.3 PE=2 SV=1	[more]
Q8LDC8	2.7e-21	50.44	Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=E...	[more]

BLAST of MC01g1453 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142251.1	4.84e-98	99.37	LOW QUALITY PROTEIN: pathogenesis-related genes transcriptional activator PTI5-l...	[more]
KAA0052648.1	3.54e-61	72.62	pathogenesis-related genes transcriptional activator PTI5-like [Cucumis melo var...	[more]
XP_008439787.1	1.61e-59	71.43	PREDICTED: pathogenesis-related genes transcriptional activator PTI5-like [Cucum...	[more]
XP_004134941.2	1.19e-55	66.86	pathogenesis-related genes transcriptional activator PTI5 [Cucumis sativus]	[more]
KAE8647706.1	2.17e-55	66.86	hypothetical protein Csa_003722 [Cucumis sativus]	[more]

BLAST of MC01g1453 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CLN0	2.34e-98	99.37	LOW QUALITY PROTEIN: pathogenesis-related genes transcriptional activator PTI5-l...	[more]
A0A5D3CPS3	1.71e-61	72.62	Pathogenesis-related genes transcriptional activator PTI5-like OS=Cucumis melo v...	[more]
A0A1S3AZ58	7.81e-60	71.43	pathogenesis-related genes transcriptional activator PTI5-like OS=Cucumis melo O...	[more]
A0A0A0KKA5	5.77e-56	66.86	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G518290 PE=...	[more]
A0A6J1EGD9	4.05e-53	67.06	pathogenesis-related genes transcriptional activator PTI5-like OS=Cucurbita mosc...	[more]

BLAST of MC01g1453 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44840.1	2.4e-25	54.24	ethylene-responsive element binding factor 13	[more]
AT4G17500.1	7.1e-25	43.58	ethylene responsive element binding factor 1	[more]
AT3G23240.1	1.9e-22	50.44	ethylene response factor 1	[more]
AT5G47220.1	7.3e-22	41.95	ethylene responsive element binding factor 2	[more]
AT4G17490.1	6.8e-20	48.41	ethylene responsive element binding factor 6	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 51..62 score: 71.67 coord: 70..86 score: 71.44
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 50..110 e-value: 1.7E-30 score: 117.3
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 50..96 e-value: 1.9E-14 score: 53.6
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 50..104 score: 21.337797
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 49..104 e-value: 1.26042E-27 score: 95.8014
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 49..105 e-value: 8.8E-25 score: 88.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..157
None	No IPR available	PANTHER	PTHR31190:SF231	PATHOGENESIS-RELATED GENES TRANSCRIPTIONAL ACTIVATOR PTI5-LIKE	coord: 33..124
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 33..124
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 50..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g1453.1	MC01g1453.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity