MC01g1384 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC01g1384
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC01: 18448412 .. 18448549 (-)
RNA-Seq Expression	MC01g1384
Synteny	MC01g1384

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGGTGGCAGAAGCGACGACATCAACGGCGCCACGTTCTCTCCCAGGAGTTCTGGCCGCCCGATTCCCAAGCGGGGGCAGGTTAAATTGGGGATTATGGTGGGCCTCGCTCATTCCGTCGCTTCAATTTTCTCG

mRNA sequence

ATGGCCGGTGGCAGAAGCGACGACATCAACGGCGCCACGTTCTCTCCCAGGAGTTCTGGCCGCCCGATTCCCAAGCGGGGGCAGGTTAAATTGGGGATTATGGTGGGCCTCGCTCATTCCGTCGCTTCAATTTTCTCG

Coding sequence (CDS)

ATGGCCGGTGGCAGAAGCGACGACATCAACGGCGCCACGTTCTCTCCCAGGAGTTCTGGCCGCCCGATTCCCAAGCGGGGGCAGGTTAAATTGGGGATTATGGTGGGCCTCGCTCATTCCGTCGCTTCAATTTTCTCG

Protein sequence

MAGGRSDDINGATFSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFS

Homology

[Close]

BLAST of MC01g1384 vs. NCBI nr
Match: XP_022977341.1 (uncharacterized protein LOC111477692 [Cucurbita maxima])

HSP 1 Score: 86.7 bits (213), Expect = 4.68e-20
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0


Query: 1   MAGGRSDDINGATFSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFS 46
           M G RSDDI+GAT+SPRSSGRPIPKRGQVKLGIMVGLAHSVASIFS
Sbjct: 56  MGGSRSDDISGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFS 101

[Close]

BLAST of MC01g1384 vs. NCBI nr
Match: KAA0052718.1 (hypothetical protein E6C27_scaffold120G003310 [Cucumis melo var. makuwa])

HSP 1 Score: 77.0 bits (188), Expect = 5.49e-17
Identity = 38/46 (82.61%), Postives = 41/46 (89.13%), Query Frame = 0


Query: 1  MAGGRSDDINGATFSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFS 46
          MAG RSD I GA +SPR+S RPIPKRGQVKLGIMVGLAH+VASIFS
Sbjct: 30 MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFS 75

[Close]

BLAST of MC01g1384 vs. NCBI nr
Match: KAG2689810.1 (hypothetical protein I3760_09G156900 [Carya illinoinensis] >KAG6696674.1 hypothetical protein I3842_09G159900 [Carya illinoinensis])

HSP 1 Score: 72.4 bits (176), Expect = 1.75e-15
Identity = 37/45 (82.22%), Postives = 39/45 (86.67%), Query Frame = 0


Query: 2  AGGRSDDINGATFSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFS 46
          AG RS  ING +FS R SGRPIPKRGQVKLGI+VGLAHSVASIFS
Sbjct: 3  AGARSGMINGGSFSGRFSGRPIPKRGQVKLGIVVGLAHSVASIFS 47

[Close]

BLAST of MC01g1384 vs. NCBI nr
Match: KAG6642713.1 (hypothetical protein CIPAW_09G159600 [Carya illinoinensis] >KAG6696673.1 hypothetical protein I3842_09G159800 [Carya illinoinensis])

HSP 1 Score: 70.1 bits (170), Expect = 1.44e-14
Identity = 36/45 (80.00%), Postives = 38/45 (84.44%), Query Frame = 0


Query: 2  AGGRSDDINGATFSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFS 46
          AG RS  ING +FS   SGRPIPKRGQVKLGI+VGLAHSVASIFS
Sbjct: 3  AGARSGMINGGSFSGSFSGRPIPKRGQVKLGIVVGLAHSVASIFS 47

[Close]

BLAST of MC01g1384 vs. NCBI nr
Match: KAG2685293.1 (hypothetical protein I3760_10G118600 [Carya illinoinensis] >KAG6692538.1 hypothetical protein I3842_10G119800 [Carya illinoinensis])

HSP 1 Score: 69.7 bits (169), Expect = 2.66e-14
Identity = 37/47 (78.72%), Postives = 40/47 (85.11%), Query Frame = 0


Query: 1  MAGGRSDD-INGATFSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFS 46
          MAG RS   ING  FSP+ SGRPIPKRG+VKLGI+VGLAHSVASIFS
Sbjct: 1  MAGARSVPMINGGYFSPKFSGRPIPKRGRVKLGIVVGLAHSVASIFS 47

[Close]

BLAST of MC01g1384 vs. ExPASy TrEMBL
Match: A0A6J1IJM3 (uncharacterized protein LOC111477692 OS=Cucurbita maxima OX=3661 GN=LOC111477692 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.27e-20
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0


Query: 1   MAGGRSDDINGATFSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFS 46
           M G RSDDI+GAT+SPRSSGRPIPKRGQVKLGIMVGLAHSVASIFS
Sbjct: 56  MGGSRSDDISGATYSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFS 101

[Close]

BLAST of MC01g1384 vs. ExPASy TrEMBL
Match: A0A5A7UBX7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G003310 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.66e-17
Identity = 38/46 (82.61%), Postives = 41/46 (89.13%), Query Frame = 0


Query: 1  MAGGRSDDINGATFSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFS 46
          MAG RSD I GA +SPR+S RPIPKRGQVKLGIMVGLAH+VASIFS
Sbjct: 30 MAGHRSDYITGAAYSPRASARPIPKRGQVKLGIMVGLAHTVASIFS 75

[Close]

BLAST of MC01g1384 vs. ExPASy TrEMBL
Match: F6GYY0 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0301g00060 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.65e-16
Identity = 37/46 (80.43%), Postives = 39/46 (84.78%), Query Frame = 0


Query: 1  MAGGRSDDINGATFSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFS 46
          MAGGR   ING  FS R SGRPIPKRGQVK+GI+VGLAHSVASIFS
Sbjct: 1  MAGGRRAMINGGNFSQRFSGRPIPKRGQVKVGIVVGLAHSVASIFS 46

[Close]

BLAST of MC01g1384 vs. ExPASy TrEMBL
Match: F6GYY1 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0301g00070 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 7.38e-16
Identity = 36/46 (78.26%), Postives = 38/46 (82.61%), Query Frame = 0


Query: 1  MAGGRSDDINGATFSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFS 46
          MAGGR D ING +FS R SGRPIPKRGQVK+ I VG AHSVASIFS
Sbjct: 1  MAGGRGDMINGGSFSQRFSGRPIPKRGQVKVAIAVGFAHSVASIFS 46

[Close]

BLAST of MC01g1384 vs. ExPASy TrEMBL
Match: A0A0A0KN78 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516990 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 5.88e-14
Identity = 33/46 (71.74%), Postives = 37/46 (80.43%), Query Frame = 0


Query: 1  MAGGRSDDINGATFSPRSSGRPIPKRGQVKLGIMVGLAHSVASIFS 46
          MA  R+  I  A +SPR+S RP PKRGQVKLGIMVGLAH+VASIFS
Sbjct: 1  MAASRTHYITAAAYSPRASARPFPKRGQVKLGIMVGLAHTVASIFS 46

The following BLAST results are available for this feature:

BLAST of MC01g1384 vs.


Match Name	E-value	Identity	Description

BLAST of MC01g1384 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022977341.1	4.68e-20	91.30	uncharacterized protein LOC111477692 [Cucurbita maxima]	[more]
KAA0052718.1	5.49e-17	82.61	hypothetical protein E6C27_scaffold120G003310 [Cucumis melo var. makuwa]	[more]
KAG2689810.1	1.75e-15	82.22	hypothetical protein I3760_09G156900 [Carya illinoinensis] >KAG6696674.1 hypothe...	[more]
KAG6642713.1	1.44e-14	80.00	hypothetical protein CIPAW_09G159600 [Carya illinoinensis] >KAG6696673.1 hypothe...	[more]
KAG2685293.1	2.66e-14	78.72	hypothetical protein I3760_10G118600 [Carya illinoinensis] >KAG6692538.1 hypothe...	[more]

BLAST of MC01g1384 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IJM3	2.27e-20	91.30	uncharacterized protein LOC111477692 OS=Cucurbita maxima OX=3661 GN=LOC111477692...	[more]
A0A5A7UBX7	2.66e-17	82.61	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
F6GYY0	3.65e-16	80.43	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0301g00060 PE=4 SV=...	[more]
F6GYY1	7.38e-16	78.26	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0301g00070 PE=4 SV=...	[more]
A0A0A0KN78	5.88e-14	71.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G516990 PE=4 SV=1	[more]

BLAST of MC01g1384 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR36615	PROTEIN, PUTATIVE-RELATED	coord: 1..46

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC01g1384.1	MC01g1384.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane